Citrus Sinensis ID: 015948

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
Protein Sequence
MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTINR
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHccEEcccccEEEEEEEEcccccEEEEEEEcccccccccccHHHHHHHHHHHccccccEEEEEEEEEccEEEEEEEccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccccccccccccccccEEEEEccccHHcccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccHHcccccccHHHHHHHHHcccccccccccHHHHHcccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEccEEEEEEEEccccccEEEEEEcccccEEEEEEEccEccccEccHHHHHHHHHHcccccccEccEEEEEEccccEEEEEEcccEEHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEccccccEEcccccEccccccccHHHccHHHHccccEccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHccccHcccccccccHHHccccccHHHHHHHHHHccccHHHcccHHHHHccHHHcccccHHHcccccccccccHccccHccHcccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRlgkqkegvnfTALREIKLLKelksphiielidafphkgnlhLVFEFMETDLETVIRntniflspaDIKSYMQMTLKGLAFCHKKwvlhrdmkpnnlligshgqlkladfglarifgspdrrftHQVFARWYrapellfgakqygagVDVWAAGCIFAELlnrrpflqgssdIDQLGKIFAAfgtatpsqwpdlaylpdyveyqyvaapplrslfpsasDDALDLLSKmftydpkaRITAQQALEHryfssaplptepnklprpatkraskasdfnpqegptvlspprktrrvmpdregfegnanrTDKIEehagetknadgeiagrneqvptsvdfsifaarppsrptinr
Flexible Loop (DISEMBL)
maevdlskkvadrylkrevlgegtygvvykaidtktgqtvaikkirlgkqkegvnfTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFssaplptepnklpRPATKraskasdfnpqegptvlspprktrrvmpdregfegnanrtdkieehagetknadgeiagrneqvptsvdfsifaarppsrptinr
Low Complexity Region (SEG)
MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTINR
Disordered region (IsUnstruct)
**********ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ***************************************************************************************************************
Disordered Region (DISOPRED)
************RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE***********************************************************************************************
Disordered Region (DISEMBL)
MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNK*********************TVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKNADGEIAGRNEQVPTSVDFSIFAARP********
Disordered Region (DISPRO)
*****LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT*PNKLPRPATK*************************************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTINR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	397	2.2.26 [Sep-21-2011]
P29620	424	Cyclin-dependent kinase D	yes	no	0.974	0.912	0.765	1e-175
A2Y4B6	424	Cyclin-dependent kinase D	N/A	no	0.974	0.912	0.765	1e-174
Q9LMT0	391	Cyclin-dependent kinase D	yes	no	0.931	0.946	0.740	1e-167
Q9C9U2	398	Cyclin-dependent kinase D	no	no	0.952	0.949	0.730	1e-164
Q9C9M7	348	Cyclin-dependent kinase D	no	no	0.838	0.956	0.773	1e-153
P50613	346	Cyclin-dependent kinase 7	yes	no	0.793	0.910	0.572	1e-104
P20911	352	Cyclin-dependent kinase 7	N/A	no	0.753	0.849	0.596	1e-103
Q03147	346	Cyclin-dependent kinase 7	yes	no	0.793	0.910	0.562	1e-102
P51952	329	Cyclin-dependent kinase 7	yes	no	0.785	0.948	0.561	1e-101
P51953	344	Cyclin-dependent kinase 7	N/A	no	0.758	0.875	0.567	6e-97

>sp|P29620|CDKD1_ORYSJ Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1

 Score =  613 bits (1581), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 301/393 (76%), Positives = 334/393 (84%), Gaps = 6/393 (1%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           K+VADRYLKREVLGEGTYGVV+KA+DTKTG TVAIKKIRLGK KEGVNFTALREIKLLKE
Sbjct: 13  KRVADRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKE 72

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           LK  +IIELIDAFP+KGNLHLVFEFMETDLE VIR+ NI LSPAD KSY+QM LKGLAFC
Sbjct: 73  LKDSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYIQMMLKGLAFC 132

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           HKKWVLHRDMKPNNLLIG+ GQLKLADFGLARIFGSP+R FTHQVFARWYRAPELLFG K
Sbjct: 133 HKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPERNFTHQVFARWYRAPELLFGTK 192

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           QYG+ VD+WAAGCIFAELL RRPFLQGSSDIDQLGKIFAAFGT   SQWPD+ YLPDYVE
Sbjct: 193 QYGSAVDIWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVYLPDYVE 252

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
           YQ+V+APPLRSLFP ASDDALDLLS+MFTYDPKARITAQQALEHRYF S P PT+P++LP
Sbjct: 253 YQFVSAPPLRSLFPMASDDALDLLSRMFTYDPKARITAQQALEHRYFLSVPAPTKPSQLP 312

Query: 308 RPATKRAS---KASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKN 364
           RP  K  S   K  D N Q+GP VLSPPRK RRV    EG E + +R D+ EEH    ++
Sbjct: 313 RPPPKGDSGNNKIPDLNLQDGPVVLSPPRKLRRVTA-HEGMEVHMHRADRTEEHPSGARH 371

Query: 365 ADGEIAGRNEQVPTSVDF-SIFAARPPSRPTIN 396
            D +++ ++ ++P SVD  +IF  RP  RPT+N
Sbjct: 372 MD-DMSSQSSRIPMSVDVGAIFGTRPAPRPTLN 403

CDK-activating kinase that may control G1/S phase progression. May control the rate of cell differentiation to accomplish proper development of organs, or in response to a changing environment. Forms a complex with cyclin CYCH1-1 that phosphorylates CDKA-1 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 3

>sp|A2Y4B6|CDKD1_ORYSI Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1

 Score =  611 bits (1575), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 301/393 (76%), Positives = 333/393 (84%), Gaps = 6/393 (1%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           K+VADRYLKREVLGEGTYGVV+KA DTKTG TVAIKKIRLGK KEGVNFTALREIKLLKE
Sbjct: 13  KRVADRYLKREVLGEGTYGVVFKADDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKE 72

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           LK  +IIELIDAFP+KGNLHLVFEFMETDLE VIR+ NI LSPAD KSY+QM LKGLAFC
Sbjct: 73  LKDSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYIQMMLKGLAFC 132

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           HKKWVLHRDMKPNNLLIG+ GQLKLADFGLARIFGSP+R FTHQVFARWYRAPELLFG K
Sbjct: 133 HKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPERNFTHQVFARWYRAPELLFGTK 192

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           QYG+ VD+WAAGCIFAELL RRPFLQGSSDIDQLGKIFAAFGT   SQWPD+ YLPDYVE
Sbjct: 193 QYGSAVDIWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVYLPDYVE 252

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
           YQ+V+APPLRSLFP ASDDALDLLS+MFTYDPKARITAQQALEHRYF S P PT+P++LP
Sbjct: 253 YQFVSAPPLRSLFPMASDDALDLLSRMFTYDPKARITAQQALEHRYFLSVPAPTKPSQLP 312

Query: 308 RPATKRAS---KASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKN 364
           RP  K  S   K  D N Q+GP VLSPPRK RRV    EG E + +R D+ EEH    ++
Sbjct: 313 RPPPKGDSGNNKIPDLNLQDGPVVLSPPRKLRRVTA-HEGMEVHMHRADRTEEHPSGARH 371

Query: 365 ADGEIAGRNEQVPTSVDF-SIFAARPPSRPTIN 396
            D +++ ++ ++P SVD  +IF  RP  RPT+N
Sbjct: 372 MD-DMSSQSSRIPMSVDVGAIFGTRPAPRPTLN 403

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9LMT0|CDKD3_ARATH Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3 PE=1 SV=1

 Score =  588 bits (1515), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/389 (74%), Positives = 319/389 (82%), Gaps = 19/389 (4%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           KKVADRYLK+EVLG+GTYGVV+KA DTKT QTVAIKKIRLGKQ+EGVN TALREIK+LKE
Sbjct: 6   KKVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKE 65

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           LK PHII LIDAFPHK NLHLVFEFMETDLE VIR++NIFLSPADIKSY+ MT KGLA+C
Sbjct: 66  LKHPHIILLIDAFPHKENLHLVFEFMETDLEAVIRDSNIFLSPADIKSYLLMTFKGLAYC 125

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H KWVLHRDMKPNNLLIG  GQLKLADFGLARIFGSP+R+FTHQVFARWYRAPELLFGAK
Sbjct: 126 HDKWVLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYRAPELLFGAK 185

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           QYGA VDVWA  CIFAELL RRPFLQG+SDIDQL KIFAAFGT    QWPDL  LPDYVE
Sbjct: 186 QYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLPDYVE 245

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
           YQ+V AP LRSLFP+ SDDALDLLSKMFTYDPKARI+ +QALEHRYF+SAP PT+P KLP
Sbjct: 246 YQFVPAPSLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYFTSAPAPTDPAKLP 305

Query: 308 RPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKNADG 367
           +P  K+  K+S +   E  TV SPPRK RRVMP+R        R D ++ H         
Sbjct: 306 KPVPKQDGKSS-YGKHEAITVQSPPRKLRRVMPER-------GRVDSLKSH--------- 348

Query: 368 EIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
               +++Q P S+DF+I A RPP+RPTI 
Sbjct: 349 --VDKDQQAPMSLDFTILAERPPNRPTIT 375

May form a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9C9U2|CDKD1_ARATH Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1

 Score =  577 bits (1487), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 284/389 (73%), Positives = 319/389 (82%), Gaps = 11/389 (2%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           KKVADRYLKREVLG+GTYGVV+KA DTK G+TVAIKKIRLGK+KEGVN TALREIKLLKE
Sbjct: 5   KKVADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKE 64

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           LK PHIIELIDAFPHK NLH+VFEFMETDLE VIR+ N++LSP D+KSY+QM LKGL +C
Sbjct: 65  LKHPHIIELIDAFPHKENLHIVFEFMETDLEAVIRDRNLYLSPGDVKSYLQMILKGLEYC 124

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H KWVLHRDMKPNNLLIG +GQLKLADFGLARIFGSP R+FTHQVFARWYRAPELLFGAK
Sbjct: 125 HGKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAPELLFGAK 184

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           QY   VDVWAAGCIFAELL RRPFLQG+SDIDQL KIFAAFGT    QWPD+  LPDYVE
Sbjct: 185 QYDGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMICLPDYVE 244

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
           YQ+V AP LRSL P+ S+DALDLLSKMFTYDPK+RI+ QQAL+HRYF+SAP PT+P KLP
Sbjct: 245 YQFVPAPSLRSLLPTVSEDALDLLSKMFTYDPKSRISIQQALKHRYFTSAPSPTDPLKLP 304

Query: 308 RPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKNADG 367
           RP +K+ +K+SD +  E   VLSP  K RRVMPDR G  GN  +   ++       + DG
Sbjct: 305 RPVSKQDAKSSD-SKLEAIKVLSPAHKFRRVMPDR-GKSGNGFKDQSVD--VMRQASHDG 360

Query: 368 EIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
                  Q P S+DF+I A RPP+RPTI 
Sbjct: 361 -------QAPMSLDFTILAERPPNRPTIT 382

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9C9M7|CDKD2_ARATH Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana GN=CDKD-2 PE=1 SV=1

 Score =  540 bits (1391), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 263/340 (77%), Positives = 293/340 (86%), Gaps = 7/340 (2%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
            DRYL+R++LGEGTYGVVYKA DTKTG+TVA+KKIRLG QKEGVNFTALREIKLLKEL  
Sbjct: 10  VDRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNQKEGVNFTALREIKLLKELNH 69

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           PHI+ELIDAFPH G+LHLVFE+M+TDLE VIR+ NIFLSP DIKSYM MTLKGLA+CHKK
Sbjct: 70  PHIVELIDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTLKGLAYCHKK 129

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
           WVLHRDMKPNNLLIG +G LKLADFGLAR+FGSP+RRFTHQVFA WYRAPELLFG++QYG
Sbjct: 130 WVLHRDMKPNNLLIGENGLLKLADFGLARLFGSPNRRFTHQVFATWYRAPELLFGSRQYG 189

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
           AGVDVWAAGCIFAELL RRPFL GS++IDQLGKIF AFGT  PSQW D+ YLPDY+E+ Y
Sbjct: 190 AGVDVWAAGCIFAELLLRRPFLPGSTEIDQLGKIFQAFGTPVPSQWSDMIYLPDYMEFSY 249

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPA 310
             APPLR++FP ASDDALDLL+KMF YDP+ RIT QQAL+HRYFSS+P PTEP KL  PA
Sbjct: 250 TPAPPLRTIFPMASDDALDLLAKMFIYDPRQRITIQQALDHRYFSSSPSPTEPGKLQIPA 309

Query: 311 TKRAS---KASDFNPQEG--PTVLSPPRKTRRVMPDREGF 345
           +K  +   KAS+ N Q G  P VLSPP K RRVM   EGF
Sbjct: 310 SKGDALEPKASEQN-QHGNSPAVLSPPGKMRRVM-GPEGF 347

Forms a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P50613|CDK7_HUMAN Cyclin-dependent kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1

 Score =  379 bits (974), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/318 (57%), Positives = 229/318 (72%), Gaps = 3/318 (0%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKL 64
           K  A RY K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALREIKL
Sbjct: 6   KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65

Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L+EL  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL
Sbjct: 66  LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
            + H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYRAPELLF
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF 185

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           GA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+  LPD
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304
           YV ++     PL  +F +A DD LDL+  +F ++P ARITA QAL+ +YFS+ P PT   
Sbjct: 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 305

Query: 305 KLPRPATKRASKASDFNP 322
           +LPRP     +     NP
Sbjct: 306 QLPRPNCPVETLKEQSNP 323

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P20911|CDK7_XENLA Cyclin-dependent kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1

 Score =  375 bits (962), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/302 (59%), Positives = 223/302 (73%), Gaps = 3/302 (0%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE---GVNFTALREIKLLKE 67
           A +Y K + LGEG +  VYKA D  T + VAIKKI+LG + E   G+N TALREIKLL+E
Sbjct: 15  AKQYEKLDFLGEGQFATVYKARDKNTDRIVAIKKIKLGHRAEANDGINRTALREIKLLQE 74

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           L  P+II L+DAF HK N+ LVF+FMETDLE +I++T++ L+PA IKSYM MTL+GL + 
Sbjct: 75  LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPAHIKSYMLMTLQGLEYL 134

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H  W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYR+PELLFGA+
Sbjct: 135 HHLWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRIYTHQVVTRWYRSPELLFGAR 194

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
            YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWP ++ LPDYV 
Sbjct: 195 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPGMSSLPDYVA 254

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
           ++     PL  +F +A DD L+LL  +FT++P AR TA QAL  RYFS+ P PT  N LP
Sbjct: 255 FKSFPGTPLHLIFIAAGDDLLELLQGLFTFNPCARCTASQALRKRYFSNRPAPTPGNLLP 314

Query: 308 RP 309
           RP
Sbjct: 315 RP 316

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of cdk1/cyclin-B during G2-M transition, and for activation of cdk2/cyclins during G1-S transition (but not complex formation). cdk7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. CAK activates the cyclin-associated kinases cdk1, cdk2, cdk4 and cdk6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (polr2a), allowing its escape from the promoter and elongation of the transcripts (By similarity). Involved in negative regulation of the meiotic maturation of Xenopus oocytes.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q03147|CDK7_MOUSE Cyclin-dependent kinase 7 OS=Mus musculus GN=Cdk7 PE=1 SV=2

 Score =  373 bits (958), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/318 (56%), Positives = 228/318 (71%), Gaps = 3/318 (0%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKL 64
           K  A RY K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALREIKL
Sbjct: 6   KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65

Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L+EL  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL
Sbjct: 66  LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
            + H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYRAPELLF
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF 185

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           GA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+  LPD
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304
           YV ++     PL+ +F +A DD L+L+  +F ++P  R TA QAL+ +YFS+ P PT   
Sbjct: 246 YVTFKSFPGVPLQHIFIAAGDDLLELIQGLFLFNPCTRTTASQALKTKYFSNRPGPTPGC 305

Query: 305 KLPRPATKRASKASDFNP 322
           +LPRP     +     NP
Sbjct: 306 QLPRPNCPVEALKEPANP 323

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P51952|CDK7_RAT Cyclin-dependent kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7 PE=2 SV=2

 Score =  369 bits (948), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/315 (56%), Positives = 226/315 (71%), Gaps = 3/315 (0%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKE 67
           A+R  K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALREIKLL+E
Sbjct: 1   ANRNEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 60

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           L  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL + 
Sbjct: 61  LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 120

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+  +THQV  RWYRAPELLFGA+
Sbjct: 121 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNWAYTHQVVTRWYRAPELLFGAR 180

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
            YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+  LPDYV 
Sbjct: 181 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 240

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
           ++     PL+ +F +A DD L+L+  +F ++P  RITA QAL  +YFS+ P PT   +LP
Sbjct: 241 FKSFPGIPLQHIFIAAGDDLLELIQGLFLFNPCTRITASQALRTKYFSNRPGPTPGCQLP 300

Query: 308 RPATKRASKASDFNP 322
           RP     +     NP
Sbjct: 301 RPNCPVEALKEQSNP 315

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P51953|CDK7_CARAU Cyclin-dependent kinase 7 OS=Carassius auratus GN=cdk7 PE=2 SV=1

 Score =  354 bits (909), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 173/305 (56%), Positives = 219/305 (71%), Gaps = 4/305 (1%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKL 64
           K  A  Y K + LGEG +  VYKA D  T   VAIKKI++G +   K+G+N TALREIKL
Sbjct: 6   KSRAKLYEKLDFLGEGQFATVYKARDKTTNTIVAIKKIKVGHRTEAKDGINRTALREIKL 65

Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L+EL  P+II L+DAF HK N+ L+  FMETDLE +I++T++ L+PA+IK+Y+ M+L+GL
Sbjct: 66  LQELSHPNIIGLLDAFGHKSNISLLC-FMETDLEVIIKDTSLVLTPANIKAYILMSLQGL 124

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
            + H  W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYRAPELLF
Sbjct: 125 EYMHNHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRAPELLF 184

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           GA+ YG GVD+WA G I AELL R PFL G SD+DQL  IF A GT T   WP ++ LPD
Sbjct: 185 GARMYGVGVDMWAVGSILAELLLRVPFLAGDSDLDQLTGIFEALGTPTEETWPGMSNLPD 244

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304
           YV ++     PL  +F +A DD L+LL  +FT++P  R TA QAL+ RYFS  P PT   
Sbjct: 245 YVSFKLFPGTPLEHIFSAAGDDLLELLKGLFTFNPCTRTTASQALKMRYFSIRPGPTPGP 304

Query: 305 KLPRP 309
           +LPRP
Sbjct: 305 QLPRP 309

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of cdk1/cyclin-B during G2-M transition, and for activation of cdk2/cyclins during G1-S transition (but not complex formation). cdk7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. CAK activates the cyclin-associated kinases cdk1, cdk2, cdk4 and cdk6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (polr2a), allowing its escape from the promoter and elongation of the transcripts.

Carassius auratus (taxid: 7957)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	397
255583528	399	cak1, putative [Ricinus communis] gi|223	0.997	0.992	0.842	0.0
356524652	413	PREDICTED: LOW QUALITY PROTEIN: cyclin-d	0.992	0.953	0.823	0.0
449439111	418	PREDICTED: cyclin-dependent kinase D-1-l	0.997	0.947	0.810	0.0
356513008	412	PREDICTED: cyclin-dependent kinase D-1-l	0.997	0.961	0.813	0.0
15419985	412	CDK-activating kinase [Medicago sativa s	0.997	0.961	0.805	0.0
225456067	422	PREDICTED: cyclin-dependent kinase D-1 [	0.997	0.938	0.812	0.0
356531164	411	PREDICTED: cyclin-dependent kinase D-1-l	0.997	0.963	0.815	0.0
356520635	411	PREDICTED: LOW QUALITY PROTEIN: cyclin-d	0.997	0.963	0.815	0.0
224118722	416	predicted protein [Populus trichocarpa]	0.992	0.947	0.809	0.0
156104834	411	CDK activating kinase [Nicotiana tabacum	0.972	0.939	0.800	0.0

>gi|255583528|ref|XP_002532521.1| cak1, putative [Ricinus communis] gi|223527752|gb|EEF29855.1| cak1, putative [Ricinus communis]

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/400 (84%), Positives = 355/400 (88%), Gaps = 4/400 (1%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           M+E D  KKVADRYLKRE+LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MSENDGEKKVADRYLKREILGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLKE+K P+IIELIDAFPHKGNLHLVFEFMETDLE VIR+ NIFLSPADIKSY QMT
Sbjct: 61  EIKLLKEIKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYFQMT 120

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           LKGLA CHKKWVLHRDMKPNNLLI  +GQLKLADFGLARIFGSPDR+FTHQVFARWYRAP
Sbjct: 121 LKGLAVCHKKWVLHRDMKPNNLLIAPNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELLFG KQYGAGVDVWAA CIFAELL RRPFLQGSSDIDQLGKIF AFGT +PSQWPDL 
Sbjct: 181 ELLFGTKQYGAGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFQAFGTPSPSQWPDLV 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           YLPDYVEYQ V A P R LFP ASDDALDLL KMFTYDPKARITA+QALEHRYFSSAPLP
Sbjct: 241 YLPDYVEYQSVPAQPWRKLFPMASDDALDLLIKMFTYDPKARITAEQALEHRYFSSAPLP 300

Query: 301 TEPNKLPRPATKRA---SKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEE 357
           TEP KLPRPA KR    S+ASDFNP EGPTVLSPPRKTRRVMP+REGF GNA + DK +E
Sbjct: 301 TEPAKLPRPAPKRESLNSRASDFNPLEGPTVLSPPRKTRRVMPEREGFAGNAYQVDKNDE 360

Query: 358 HAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTINR 397
           H G+ K A G   GR+EQ P S+DFS+F +RP SRPTINR
Sbjct: 361 H-GDVKQAAGNYTGRSEQAPMSIDFSVFGSRPMSRPTINR 399

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524652|ref|XP_003530942.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinase D-1-like [Glycine max]

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/396 (82%), Positives = 358/396 (90%), Gaps = 2/396 (0%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           M+++D SKKVADRYLKREVLGEGTYGVVYKAIDT TGQTVAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MSDMDPSKKVADRYLKREVLGEGTYGVVYKAIDTHTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLKELK P+I+ELIDAFPHKGNLHLVFEFMETDLE VIR+ NIFLSP+D KSY+QMT
Sbjct: 61  EIKLLKELKDPNIVELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPSDTKSYLQMT 120

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIGS+GQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARMFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELLFGAKQYG GVDVWAAGCIFAELL RRPFLQG+SDIDQLGKIF+AFGT T SQWPD+ 
Sbjct: 181 ELLFGAKQYGPGVDVWAAGCIFAELLLRRPFLQGTSDIDQLGKIFSAFGTPTASQWPDMV 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           YLPDYVEYQYV APPLRSLFP  +DDALDLLSKMFTYDPKARI+ QQALEHRYFSSAPLP
Sbjct: 241 YLPDYVEYQYVPAPPLRSLFPMVTDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLP 300

Query: 301 TEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAG 360
           ++P+KLPRPA KR S+ SDFN QEGPTVLSPPRK+RRVMP R+GFEG++ + DK++   G
Sbjct: 301 SDPDKLPRPAPKRESRTSDFNLQEGPTVLSPPRKSRRVMPGRDGFEGSSLQADKVDASFG 360

Query: 361 ETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
           +    D    G+NE  P SV+FSIF  +PP+RPTIN
Sbjct: 361 DFNXDDN--TGKNESAPMSVEFSIFGLKPPNRPTIN 394

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439111|ref|XP_004137331.1| PREDICTED: cyclin-dependent kinase D-1-like [Cucumis sativus] gi|449497514|ref|XP_004160424.1| PREDICTED: cyclin-dependent kinase D-1-like [Cucumis sativus]

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/401 (81%), Positives = 354/401 (88%), Gaps = 5/401 (1%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           MA++D SKKVADRYLKREVLGEGTYGVVYKAIDT+TGQTVAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MADLDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLKELK  +IIELIDAFPHKGNLHLVFEFMETDLE VIR+ NIFLSPADIKSY+QMT
Sbjct: 61  EIKLLKELKDSNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT 120

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIGS+GQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELLFG KQYG+ VDVWAA CIFAELL RRPFLQGSSDIDQLGKIFAAFGT TPSQWPD+ 
Sbjct: 181 ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDML 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           YLPDYVE+QYV APPLRSLFP ASDD LDLLSKMF YDPK+RIT QQALEHRYF+SAPLP
Sbjct: 241 YLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFTSAPLP 300

Query: 301 TEPNKLPRPATKRA-----SKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKI 355
           T+P+KLPRP +KR      S+  D N  +GPTVLSPPRK+RRVMPDRE FEGNA R D++
Sbjct: 301 TDPSKLPRPTSKREPTNSNSRVLDLNSNDGPTVLSPPRKSRRVMPDREAFEGNAYRADRL 360

Query: 356 EEHAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
           ++H  E +        +NE  P S+DFS+F  +PP+RPTIN
Sbjct: 361 DDHVNEVRELAAGNTSKNEAAPMSLDFSVFGGKPPNRPTIN 401

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513008|ref|XP_003525206.1| PREDICTED: cyclin-dependent kinase D-1-like [Glycine max]

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/396 (81%), Positives = 354/396 (89%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           M ++D SKKVADRYLKREVLGEGTYGVVYKAIDT TGQTVAIKKIRLGK+KEGVNFTALR
Sbjct: 1   MTDMDHSKKVADRYLKREVLGEGTYGVVYKAIDTHTGQTVAIKKIRLGKRKEGVNFTALR 60

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLKELK P+I+ELIDAFPHKGNLHLVFEFMETDLE VIR+ NIFLSP D KSY+QMT
Sbjct: 61  EIKLLKELKDPNIVELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDTKSYLQMT 120

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           LKGLA+CHKKWVLHRDMKPNNLLIGS+GQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARMFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELLFGAKQYG GVDVWAAGCIFAELL RRPFLQG+SDIDQLGKIF+AFG  T  QWPD+ 
Sbjct: 181 ELLFGAKQYGPGVDVWAAGCIFAELLLRRPFLQGTSDIDQLGKIFSAFGIPTAPQWPDMV 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           YLPDYVEYQYV APPLRSLFP A+DDALDLLSKMFTYDPK RI+  QALEHRYFSSAPLP
Sbjct: 241 YLPDYVEYQYVLAPPLRSLFPMATDDALDLLSKMFTYDPKTRISVHQALEHRYFSSAPLP 300

Query: 301 TEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAG 360
           ++P+KLPRPA KR S+ SDFN QEGPT+LSPPRK+RRVMP R+GFEGN+ + DK++   G
Sbjct: 301 SDPDKLPRPAPKRESRVSDFNSQEGPTILSPPRKSRRVMPGRDGFEGNSLQADKVDASFG 360

Query: 361 ETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
           + +    +  G+NE  P SVDFSIF  +PP+RPTIN
Sbjct: 361 DFRQTTDDNTGKNESAPMSVDFSIFGLKPPNRPTIN 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15419985|gb|AAK97227.1|AF302013_1 CDK-activating kinase [Medicago sativa subsp. x varia]

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/396 (80%), Positives = 350/396 (88%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           M E+D SKKVADRYLKREVLGEGTYGVVYKAIDT+TGQTVAIKKIR+GKQKEGVNFTALR
Sbjct: 1   MTELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRIGKQKEGVNFTALR 60

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLKELK P+IIELID FPHKGNLHLVFEFMETDLE VIR+ NIFL+P DIKSY+QMT
Sbjct: 61  EIKLLKELKDPNIIELIDCFPHKGNLHLVFEFMETDLEAVIRDRNIFLAPGDIKSYLQMT 120

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           LKGLA CHKKW+LHRDMKPNNLLIG +GQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAHCHKKWILHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELLFG KQYG GVDVWAA CIFAELL RRPFLQGSSDIDQLGKIFAAFGT +PSQWPD+ 
Sbjct: 181 ELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSPSQWPDMV 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           YLPDYVEYQ+V APPLRSLFP A+DDALDLLSKMFTYDPK RI+ QQALEHRYF+  P P
Sbjct: 241 YLPDYVEYQFVPAPPLRSLFPMATDDALDLLSKMFTYDPKDRISVQQALEHRYFTCPPQP 300

Query: 301 TEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAG 360
           T+P KLPRPA K+  K SD NP EGPTVLSPPRKTRRVMP R+G EGN+ + D+++++ G
Sbjct: 301 TDPVKLPRPAPKKEIKPSDLNPPEGPTVLSPPRKTRRVMPGRDGLEGNSLQGDRVDDNHG 360

Query: 361 ETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
             K   G+  G+NE  P S+DFS+F  +PP+RPTIN
Sbjct: 361 NLKQTGGDNTGKNEPAPMSLDFSVFGLKPPNRPTIN 396

Source: Medicago sativa subsp. x varia

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456067|ref|XP_002280613.1| PREDICTED: cyclin-dependent kinase D-1 [Vitis vinifera] gi|297734275|emb|CBI15522.3| unnamed protein product [Vitis vinifera]

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/401 (81%), Positives = 349/401 (87%), Gaps = 5/401 (1%)

Query: 1   MAEVD--LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA 58
           M+EV    SKKVADRYLKREVLGEGTYGVV KAIDTKTGQ VAIKKIRLGK KEGVNFTA
Sbjct: 1   MSEVPNVFSKKVADRYLKREVLGEGTYGVVSKAIDTKTGQIVAIKKIRLGKHKEGVNFTA 60

Query: 59  LREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LREIKLLKELK PHIIELIDAFPHKGNLHLVFEFMETDLE VIR+ NI LS ADIKS++Q
Sbjct: 61  LREIKLLKELKDPHIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSLADIKSFLQ 120

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
           MTLKGLAFCHKKWVLHRDMKPNNLLIG  GQLKLADFGLARIFGSPDR+FTHQVFARWYR
Sbjct: 121 MTLKGLAFCHKKWVLHRDMKPNNLLIGDKGQLKLADFGLARIFGSPDRKFTHQVFARWYR 180

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APELLFG+KQYG GVDVWAA CIFAELL RRPFLQGSSDIDQLGKIFAAFGT  P+QWPD
Sbjct: 181 APELLFGSKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKPAQWPD 240

Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
           + YLPDYVEYQ+V APPLRSLFP ASDDALDLLSKMFTYDPK RI+ QQALEHRYF+S P
Sbjct: 241 MVYLPDYVEYQFVPAPPLRSLFPMASDDALDLLSKMFTYDPKTRISVQQALEHRYFTSGP 300

Query: 299 LPTEPNKLPRPATKRAS---KASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKI 355
           LPTEP KLPRP  KR S   + SDFN QEGPTVLSPPRK+RRVMP R+GFE NA++ +K 
Sbjct: 301 LPTEPAKLPRPHPKRESLNTRVSDFNQQEGPTVLSPPRKSRRVMPQRDGFEENAHQVEKS 360

Query: 356 EEHAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
           +EH  + + A GE    NE  P S+DFS+F +RPP RPTIN
Sbjct: 361 DEHVNDIRQATGERMSWNEHAPMSIDFSVFGSRPPPRPTIN 401

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531164|ref|XP_003534148.1| PREDICTED: cyclin-dependent kinase D-1-like [Glycine max]

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/396 (81%), Positives = 350/396 (88%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           MAE+DLSKKVADRYLKREVLGEGTYGVVYKAIDT+TGQTVAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MAELDLSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLKELK P+IIELIDAFPHKGNLHLVFEFMETDLE VIR+ NI LSP DIKSY+QMT
Sbjct: 61  EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPGDIKSYLQMT 120

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           LKGLA CHKKWVLHRDMKPNNLLIGS+GQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAICHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARVFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELLFG KQYG GVDVWAA CIFAELL RRPFLQGSSDIDQLGKIFAAFGT + SQWPD+ 
Sbjct: 181 ELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSASQWPDMI 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           +LPDYVEYQ+V APPLRSLFP ASDDALDLLSKMFTYDPKARI+ QQALEHRYFSSAPL 
Sbjct: 241 FLPDYVEYQHVPAPPLRSLFPMASDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLL 300

Query: 301 TEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAG 360
           T+P KLPRPA K+ SK SD    EGPTVLSPPRK+RRVMP R+G EGN+ + DK ++   
Sbjct: 301 TDPVKLPRPAPKKESKVSDVISNEGPTVLSPPRKSRRVMPGRDGSEGNSLQGDKFDDSVV 360

Query: 361 ETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
             + A G+  G+NE  P S+DFS+F  +PP+RP I 
Sbjct: 361 SVRQAAGDNTGKNEPAPMSLDFSLFGLKPPNRPMIT 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520635|ref|XP_003528966.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinase D-1-like [Glycine max]

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/396 (81%), Positives = 350/396 (88%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           MAE+DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MAELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLKELK P+IIELIDAFPHKGNLHLVFEFMETDLE VIR+ NI LSP+DIKSY+QMT
Sbjct: 61  EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPSDIKSYLQMT 120

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           LKGLA CHKKWVLHRDMKPNNLLIGS+GQLKLADFGLAR+FGSPDRRFTHQVFARWYRAP
Sbjct: 121 LKGLAICHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARVFGSPDRRFTHQVFARWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELLFG KQYG GVDVWAA CIFAELL RRPFLQGSSDIDQLGKIFAAFGT + SQWPD+ 
Sbjct: 181 ELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSASQWPDMI 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           +LPDYVEYQ+V APPLRSLFP ASDDALDLL KMFTYDPKARI+  QALEHRYFSSAPLP
Sbjct: 241 FLPDYVEYQHVPAPPLRSLFPMASDDALDLLXKMFTYDPKARISVPQALEHRYFSSAPLP 300

Query: 301 TEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAG 360
           T+P KL RPA K+ SK SD    EGPTVLSPPRK+RRVMP R+G EGN+ + DK ++   
Sbjct: 301 TDPVKLSRPAPKKESKVSDVISNEGPTVLSPPRKSRRVMPGRDGSEGNSLQGDKFDDSVV 360

Query: 361 ETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
             + A G+  G+NE  P S+DFS+F  +PP+RPTI 
Sbjct: 361 SVRQAAGDNMGKNEPAPMSLDFSLFGLKPPNRPTIT 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118722|ref|XP_002317890.1| predicted protein [Populus trichocarpa] gi|222858563|gb|EEE96110.1| predicted protein [Populus trichocarpa]

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/399 (80%), Positives = 345/399 (86%), Gaps = 5/399 (1%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           M+E D+ KKVADRYLKRE+LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
Sbjct: 1   MSENDVEKKVADRYLKREILGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLKELK P+IIELIDAFPHKGNLHLVFEFMETDLE VIR+ NIFLSP DIKSY QMT
Sbjct: 61  EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDPNIFLSPGDIKSYFQMT 120

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           LKGL  CHKKWVLHRDMKPNNLLIGS+GQLKLADFGLARIFGSP R+FTHQVFARWYRAP
Sbjct: 121 LKGLLVCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELLFGAKQYGAGVDVWAAGCI AELLNRRPFLQG SDIDQLGKIF   GT TPSQWPDL 
Sbjct: 181 ELLFGAKQYGAGVDVWAAGCILAELLNRRPFLQGDSDIDQLGKIFQKLGTPTPSQWPDLE 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           +LPD+VEY    A P R L P+ASDDALDLLSK+FTYDPK RIT QQALEHRYF+S PLP
Sbjct: 241 WLPDFVEYSSQTAQPWRKLCPTASDDALDLLSKLFTYDPKTRITVQQALEHRYFTSVPLP 300

Query: 301 TEPNKLPRPATKRAS---KASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEE 357
           T+P KLPRPA KR S   + SD +  EGPTVLSP +K RRVMPDRE F+GNA   DKI++
Sbjct: 301 TDPAKLPRPAPKRESHNPRTSDLH--EGPTVLSPKKKARRVMPDREVFDGNAYHVDKIDQ 358

Query: 358 HAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
           H GE + A G+   RNEQVP SVDFSIF A+P SRPTIN
Sbjct: 359 HGGEIRWAAGDNTSRNEQVPMSVDFSIFGAKPMSRPTIN 397

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|156104834|dbj|BAF75824.1| CDK activating kinase [Nicotiana tabacum]

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/401 (80%), Positives = 350/401 (87%), Gaps = 15/401 (3%)

Query: 1   MAEVD--LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA 58
           M EVD  L+KKVADRYLKREVLGEGTYGVV+KAIDTK+GQTVAIKKIRLGKQKEGVNFTA
Sbjct: 1   MTEVDNLLTKKVADRYLKREVLGEGTYGVVFKAIDTKSGQTVAIKKIRLGKQKEGVNFTA 60

Query: 59  LREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LREIKLLKELK PH+IELIDAFPHKGNLHLVFEFMETDLE VIR+ NIFLSPADIKSY+Q
Sbjct: 61  LREIKLLKELKDPHVIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYIQ 120

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
           MTLKGLAFCHKK+VLHRDMKPNNLLIG  GQLKLADFGLAR+FGSPD RFTHQVFARWYR
Sbjct: 121 MTLKGLAFCHKKYVLHRDMKPNNLLIGPKGQLKLADFGLARLFGSPD-RFTHQVFARWYR 179

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APELLFGAKQYG GVDVWAA CIFAELL RRPFLQG+SDIDQLGKIFAAFGT  PSQW D
Sbjct: 180 APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKPSQWAD 239

Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
           + YLPDYVEYQYV   PL++LFP+A++DALDLLSKMF+YDPKARI+AQQALEHRYFSS P
Sbjct: 240 MVYLPDYVEYQYVPGQPLKTLFPTATEDALDLLSKMFSYDPKARISAQQALEHRYFSSGP 299

Query: 299 LPTEPNKLPRPATKRAS---KASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKI 355
           LPTEP  LPRP  KR S   + SDFN ++GP VLSPPRK+RRVMP REGFE N  R +K+
Sbjct: 300 LPTEPVLLPRPPPKRESANPRVSDFNSRDGPVVLSPPRKSRRVMPQREGFEANM-RPEKM 358

Query: 356 EEHAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTIN 396
           ++H        G    R+EQVP S+DFS+F  RPP+RPTIN
Sbjct: 359 DDH--------GNAGERSEQVPMSLDFSVFGMRPPTRPTIN 391

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	397
TAIR|locus:2194045	391	CDKD1;3 "cyclin-dependent kina	0.879	0.892	0.78	1.5e-151
TAIR|locus:2027819	398	CDKD1;1 "cyclin-dependent kina	0.949	0.947	0.731	1.6e-148
TAIR|locus:2033349	348	CAK4 "CDK-activating kinase 4"	0.836	0.954	0.775	4.9e-140
UNIPROTKB|P50613	346	CDK7 "Cyclin-dependent kinase	0.793	0.910	0.572	6.8e-95
UNIPROTKB|Q08DX5	346	CDK7 "Cyclin-dependent kinase	0.801	0.919	0.562	3e-94
UNIPROTKB|C9K505	346	CDK7 "Uncharacterized protein"	0.801	0.919	0.562	3.8e-94
MGI|MGI:102956	346	Cdk7 "cyclin-dependent kinase	0.768	0.881	0.576	1e-93
ZFIN|ZDB-GENE-010320-2	345	cdk7 "cyclin-dependent kinase	0.760	0.875	0.583	2.1e-93
RGD|621124	329	Cdk7 "cyclin-dependent kinase	0.785	0.948	0.561	3.9e-92
UNIPROTKB|P51952	329	Cdk7 "Cyclin-dependent kinase	0.785	0.948	0.561	3.9e-92

TAIR|locus:2194045 CDKD1;3 "cyclin-dependent kinase D1;3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1418 (504.2 bits), Expect = 1.5e-151, Sum P(2) = 1.5e-151
 Identities = 273/350 (78%), Positives = 300/350 (85%)

Query:     8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
             KKVADRYLK+EVLG+GTYGVV+KA DTKT QTVAIKKIRLGKQ+EGVN TALREIK+LKE
Sbjct:     6 KKVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKE 65

Query:    68 LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             LK PHII LIDAFPHK NLHLVFEFMETDLE VIR++NIFLSPADIKSY+ MT KGLA+C
Sbjct:    66 LKHPHIILLIDAFPHKENLHLVFEFMETDLEAVIRDSNIFLSPADIKSYLLMTFKGLAYC 125

Query:   128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
             H KWVLHRDMKPNNLLIG  GQLKLADFGLARIFGSP+R+FTHQVFARWYRAPELLFGAK
Sbjct:   126 HDKWVLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYRAPELLFGAK 185

Query:   188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
             QYGA VDVWA  CIFAELL RRPFLQG+SDIDQL KIFAAFGT    QWPDL  LPDYVE
Sbjct:   186 QYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLPDYVE 245

Query:   248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
             YQ+V AP LRSLFP+ SDDALDLLSKMFTYDPKARI+ +QALEHRYF+SAP PT+P KLP
Sbjct:   246 YQFVPAPSLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYFTSAPAPTDPAKLP 305

Query:   308 RPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEE 357
             +P  K+  K+S +   E  TV SPPRK RRVMP+R   +   +  DK ++
Sbjct:   306 KPVPKQDGKSS-YGKHEAITVQSPPRKLRRVMPERGRVDSLKSHVDKDQQ 354

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000280 "nuclear division" evidence=RCA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=RCA

GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA

GO:0010440 "stomatal lineage progression" evidence=RCA

GO:0042023 "DNA endoreduplication" evidence=RCA

GO:0045736 "negative regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=RCA

GO:0051225 "spindle assembly" evidence=RCA

TAIR|locus:2027819 CDKD1;1 "cyclin-dependent kinase D1;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1450 (515.5 bits), Expect = 1.6e-148, P = 1.6e-148
 Identities = 284/388 (73%), Positives = 319/388 (82%)

Query:     8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
             KKVADRYLKREVLG+GTYGVV+KA DTK G+TVAIKKIRLGK+KEGVN TALREIKLLKE
Sbjct:     5 KKVADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKE 64

Query:    68 LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             LK PHIIELIDAFPHK NLH+VFEFMETDLE VIR+ N++LSP D+KSY+QM LKGL +C
Sbjct:    65 LKHPHIIELIDAFPHKENLHIVFEFMETDLEAVIRDRNLYLSPGDVKSYLQMILKGLEYC 124

Query:   128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
             H KWVLHRDMKPNNLLIG +GQLKLADFGLARIFGSP R+FTHQVFARWYRAPELLFGAK
Sbjct:   125 HGKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAPELLFGAK 184

Query:   188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
             QY   VDVWAAGCIFAELL RRPFLQG+SDIDQL KIFAAFGT    QWPD+  LPDYVE
Sbjct:   185 QYDGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMICLPDYVE 244

Query:   248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
             YQ+V AP LRSL P+ S+DALDLLSKMFTYDPK+RI+ QQAL+HRYF+SAP PT+P KLP
Sbjct:   245 YQFVPAPSLRSLLPTVSEDALDLLSKMFTYDPKSRISIQQALKHRYFTSAPSPTDPLKLP 304

Query:   308 RPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAGETKNADG 367
             RP +K+ +K+SD +  E   VLSP  K RRVMPDR G  GN  +   ++       + DG
Sbjct:   305 RPVSKQDAKSSD-SKLEAIKVLSPAHKFRRVMPDR-GKSGNGFKDQSVD--VMRQASHDG 360

Query:   368 EIAGRNEQVPTSVDFSIFAARPPSRPTI 395
                    Q P S+DF+I A RPP+RPTI
Sbjct:   361 -------QAPMSLDFTILAERPPNRPTI 381

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030154 "cell differentiation" evidence=TAS

GO:0051726 "regulation of cell cycle" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=RCA

GO:0010440 "stomatal lineage progression" evidence=RCA

GO:0042023 "DNA endoreduplication" evidence=RCA

GO:0045736 "negative regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=RCA

TAIR|locus:2033349 CAK4 "CDK-activating kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
 Identities = 263/339 (77%), Positives = 293/339 (86%)

Query:    12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
             DRYL+R++LGEGTYGVVYKA DTKTG+TVA+KKIRLG QKEGVNFTALREIKLLKEL  P
Sbjct:    11 DRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNQKEGVNFTALREIKLLKELNHP 70

Query:    72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
             HI+ELIDAFPH G+LHLVFE+M+TDLE VIR+ NIFLSP DIKSYM MTLKGLA+CHKKW
Sbjct:    71 HIVELIDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTLKGLAYCHKKW 130

Query:   132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
             VLHRDMKPNNLLIG +G LKLADFGLAR+FGSP+RRFTHQVFA WYRAPELLFG++QYGA
Sbjct:   131 VLHRDMKPNNLLIGENGLLKLADFGLARLFGSPNRRFTHQVFATWYRAPELLFGSRQYGA 190

Query:   192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
             GVDVWAAGCIFAELL RRPFL GS++IDQLGKIF AFGT  PSQW D+ YLPDY+E+ Y 
Sbjct:   191 GVDVWAAGCIFAELLLRRPFLPGSTEIDQLGKIFQAFGTPVPSQWSDMIYLPDYMEFSYT 250

Query:   252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT 311
              APPLR++FP ASDDALDLL+KMF YDP+ RIT QQAL+HRYFSS+P PTEP KL  PA+
Sbjct:   251 PAPPLRTIFPMASDDALDLLAKMFIYDPRQRITIQQALDHRYFSSSPSPTEPGKLQIPAS 310

Query:   312 KRAS---KASDFNPQEG--PTVLSPPRKTRRVMPDREGF 345
             K  +   KAS+ N Q G  P VLSPP K RRVM   EGF
Sbjct:   311 KGDALEPKASEQN-QHGNSPAVLSPPGKMRRVMGP-EGF 347

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=RCA

GO:0010440 "stomatal lineage progression" evidence=RCA

GO:0042023 "DNA endoreduplication" evidence=RCA

GO:0045736 "negative regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=RCA

UNIPROTKB|P50613 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
 Identities = 182/318 (57%), Positives = 229/318 (72%)

Query:     8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKL 64
             K  A RY K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALREIKL
Sbjct:     6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65

Query:    65 LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             L+EL  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL
Sbjct:    66 LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125

Query:   125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
              + H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYRAPELLF
Sbjct:   126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF 185

Query:   185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             GA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+  LPD
Sbjct:   186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245

Query:   245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304
             YV ++     PL  +F +A DD LDL+  +F ++P ARITA QAL+ +YFS+ P PT   
Sbjct:   246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 305

Query:   305 KLPRPATKRASKASDFNP 322
             +LPRP     +     NP
Sbjct:   306 QLPRPNCPVETLKEQSNP 323

GO:0005524 "ATP binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IDA

GO:0003713 "transcription coactivator activity" evidence=NAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=NAS

GO:0050681 "androgen receptor binding" evidence=NAS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA;TAS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0008022 "protein C-terminus binding" evidence=IPI

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0030521 "androgen receptor signaling pathway" evidence=NAS

GO:0005675 "holo TFIIH complex" evidence=IDA

GO:0008094 "DNA-dependent ATPase activity" evidence=IDA

GO:0007050 "cell cycle arrest" evidence=TAS

GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=TAS

GO:0008283 "cell proliferation" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006281 "DNA repair" evidence=TAS

GO:0006283 "transcription-coupled nucleotide-excision repair" evidence=TAS

GO:0006289 "nucleotide-excision repair" evidence=TAS

GO:0006360 "transcription from RNA polymerase I promoter" evidence=TAS

GO:0006361 "transcription initiation from RNA polymerase I promoter" evidence=TAS

GO:0006362 "transcription elongation from RNA polymerase I promoter" evidence=TAS

GO:0006363 "termination of RNA polymerase I transcription" evidence=TAS

GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=TAS

GO:0006370 "7-methylguanosine mRNA capping" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0050434 "positive regulation of viral transcription" evidence=TAS

GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0000084 "S phase of mitotic cell cycle" evidence=TAS

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0000718 "nucleotide-excision repair, DNA damage removal" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|Q08DX5 CDK7 "Cyclin-dependent kinase 7" [Bos taurus (taxid:9913)]

 Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
 Identities = 181/322 (56%), Positives = 231/322 (71%)

Query:     4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALR 60
             VD+  + A RY K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALR
Sbjct:     3 VDVKSR-AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61

Query:    61 EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
             EIKLL+EL  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MT
Sbjct:    62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT 121

Query:   121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
             L+GL + H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP R +THQV  RWYRAP
Sbjct:   122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPSRAYTHQVVTRWYRAP 181

Query:   181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
             ELLFGA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+ 
Sbjct:   182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241

Query:   241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
              LPD+V ++     PL+ +F +A DD LDL+  +F ++P  RITA QAL+ +YFS+ P P
Sbjct:   242 SLPDFVTFKSFPGIPLQHIFIAAGDDLLDLIQGLFLFNPCTRITATQALKTKYFSNRPGP 301

Query:   301 TEPNKLPRPATKRASKASDFNP 322
             T   +LPRP     +     NP
Sbjct:   302 TPGCQLPRPNCPAEALKEQSNP 323

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0008094 "DNA-dependent ATPase activity" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005675 "holo TFIIH complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|C9K505 CDK7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 181/322 (56%), Positives = 232/322 (72%)

Query:     4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALR 60
             VD+  + A RY K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALR
Sbjct:     3 VDVKSR-AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61

Query:    61 EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
             EIKLL+EL  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MT
Sbjct:    62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT 121

Query:   121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
             L+GL + H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYRAP
Sbjct:   122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAP 181

Query:   181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
             ELLFGA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+ 
Sbjct:   182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241

Query:   241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
              LPD+V ++     PL+ +F +A DD LDL+  +F ++P  RITA QAL+ +YFS+ P P
Sbjct:   242 SLPDFVTFKSFPGIPLQHIFIAAGDDLLDLIQGLFLFNPCTRITATQALKTKYFSNRPGP 301

Query:   301 TEPNKLPRPATKRASKASDFNP 322
             T   +LPRP     +     NP
Sbjct:   302 TPGCQLPRPNCPVEALKEQSNP 323

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:102956 Cdk7 "cyclin-dependent kinase 7" [Mus musculus (taxid:10090)]

 Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
 Identities = 178/309 (57%), Positives = 228/309 (73%)

Query:     4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALR 60
             VD+  + A RY K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALR
Sbjct:     3 VDVKSR-AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61

Query:    61 EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
             EIKLL+EL  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MT
Sbjct:    62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT 121

Query:   121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
             L+GL + H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYRAP
Sbjct:   122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAP 181

Query:   181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
             ELLFGA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+ 
Sbjct:   182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241

Query:   241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
              LPDYV ++     PL+ +F +A DD L+L+  +F ++P  R TA QAL+ +YFS+ P P
Sbjct:   242 SLPDYVTFKSFPGVPLQHIFIAAGDDLLELIQGLFLFNPCTRTTASQALKTKYFSNRPGP 301

Query:   301 TEPNKLPRP 309
             T   +LPRP
Sbjct:   302 TPGCQLPRP 310

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=ISO;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISO;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005675 "holo TFIIH complex" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0005856 "cytoskeleton" evidence=ISO

GO:0006281 "DNA repair" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;ISS;IDA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0007049 "cell cycle" evidence=ISS

GO:0008022 "protein C-terminus binding" evidence=ISO

GO:0008094 "DNA-dependent ATPase activity" evidence=ISO

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016301 "kinase activity" evidence=IDA

GO:0016310 "phosphorylation" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0032403 "protein complex binding" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0051301 "cell division" evidence=IEA

ZFIN|ZDB-GENE-010320-2 cdk7 "cyclin-dependent kinase 7" [Danio rerio (taxid:7955)]

 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 178/305 (58%), Positives = 226/305 (74%)

Query:     8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKL 64
             K  A RY K + LGEG +  VYKA D  T   VAIKKI++G +   K+G+N TALREIKL
Sbjct:     6 KSRAKRYEKLDFLGEGQFATVYKARDKTTNTIVAIKKIKVGHRTEAKDGINRTALREIKL 65

Query:    65 LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             L+EL  P+II L+DAF HK N+ LVF++METDLE +I++T++ L+PA+IK+Y+ MTL+GL
Sbjct:    66 LQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAYILMTLQGL 125

Query:   125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
              + H  W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYRAPELLF
Sbjct:   126 EYMHNHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRAPELLF 185

Query:   185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             GA+ YG GVD+WA GCI AELL R PFL G SD+DQL KIF A GT T   WP ++ LPD
Sbjct:   186 GARMYGVGVDMWAVGCILAELLLRVPFLAGDSDLDQLTKIFEALGTPTDEIWPGMSSLPD 245

Query:   245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304
             YV ++     PL  +F +A DD L+LL  +FTY+P +R TA QAL+ +YFS+ P PT   
Sbjct:   246 YVSFKPFPGTPLEHIFSAAGDDLLELLRGLFTYNPCSRTTAMQALKMKYFSNRPGPTPGP 305

Query:   305 KLPRP 309
             +LPRP
Sbjct:   306 QLPRP 310

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

RGD|621124 Cdk7 "cyclin-dependent kinase 7" [Rattus norvegicus (taxid:10116)]

 Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
 Identities = 177/315 (56%), Positives = 226/315 (71%)

Query:    11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKE 67
             A+R  K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALREIKLL+E
Sbjct:     1 ANRNEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 60

Query:    68 LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             L  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL + 
Sbjct:    61 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 120

Query:   128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
             H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+  +THQV  RWYRAPELLFGA+
Sbjct:   121 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNWAYTHQVVTRWYRAPELLFGAR 180

Query:   188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
              YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+  LPDYV 
Sbjct:   181 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 240

Query:   248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
             ++     PL+ +F +A DD L+L+  +F ++P  RITA QAL  +YFS+ P PT   +LP
Sbjct:   241 FKSFPGIPLQHIFIAAGDDLLELIQGLFLFNPCTRITASQALRTKYFSNRPGPTPGCQLP 300

Query:   308 RPATKRASKASDFNP 322
             RP     +     NP
Sbjct:   301 RPNCPVEALKEQSNP 315

GO:0000307 "cyclin-dependent protein kinase holoenzyme complex" evidence=TAS

GO:0004672 "protein kinase activity" evidence=ISO;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005675 "holo TFIIH complex" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0006281 "DNA repair" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO;ISS

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0007049 "cell cycle" evidence=TAS

GO:0007126 "meiosis" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=ISO

GO:0008094 "DNA-dependent ATPase activity" evidence=ISO;ISS

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=ISO;ISS

GO:0016020 "membrane" evidence=IDA

GO:0016301 "kinase activity" evidence=ISO

GO:0016310 "phosphorylation" evidence=ISO

GO:0032403 "protein complex binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0051301 "cell division" evidence=IEA

UNIPROTKB|P51952 Cdk7 "Cyclin-dependent kinase 7" [Rattus norvegicus (taxid:10116)]

 Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
 Identities = 177/315 (56%), Positives = 226/315 (71%)

Query:    11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKE 67
             A+R  K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALREIKLL+E
Sbjct:     1 ANRNEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 60

Query:    68 LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             L  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL + 
Sbjct:    61 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 120

Query:   128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
             H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+  +THQV  RWYRAPELLFGA+
Sbjct:   121 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNWAYTHQVVTRWYRAPELLFGAR 180

Query:   188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
              YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+  LPDYV 
Sbjct:   181 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 240

Query:   248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
             ++     PL+ +F +A DD L+L+  +F ++P  RITA QAL  +YFS+ P PT   +LP
Sbjct:   241 FKSFPGIPLQHIFIAAGDDLLELIQGLFLFNPCTRITASQALRTKYFSNRPGPTPGCQLP 300

Query:   308 RPATKRASKASDFNP 322
             RP     +     NP
Sbjct:   301 RPNCPVEALKEQSNP 315

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2Y4B6	CDKD1_ORYSI	2, ., 7, ., 1, 1, ., 2, 3	0.7659	0.9748	0.9127	N/A	no
P50613	CDK7_HUMAN	2, ., 7, ., 1, 1, ., 2, 3	0.5723	0.7934	0.9104	yes	no
P29620	CDKD1_ORYSJ	2, ., 7, ., 1, 1, ., 2, 3	0.7659	0.9748	0.9127	yes	no
Q9LMT0	CDKD3_ARATH	2, ., 7, ., 1, 1, ., 2, 3	0.7403	0.9319	0.9462	yes	no
Q9C9U2	CDKD1_ARATH	2, ., 7, ., 1, 1, ., 2, 3	0.7300	0.9521	0.9497	no	no
Q12126	CRK1_SCHPO	2, ., 7, ., 1, 1, ., 2, 3	0.4845	0.8035	0.9522	yes	no
P51952	CDK7_RAT	2, ., 7, ., 1, 1, ., 2, 3	0.5619	0.7858	0.9483	yes	no
Q03147	CDK7_MOUSE	2, ., 7, ., 1, 1, ., 2, 3	0.5628	0.7934	0.9104	yes	no
Q9C9M7	CDKD2_ARATH	2, ., 7, ., 1, 1, ., 2, 3	0.7735	0.8387	0.9568	no	no
P54685	CDK7_DICDI	2, ., 7, ., 1, 1, ., 2, 3	0.5324	0.7657	0.8444	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.22	0.979
3rd Layer	2.7.11.23	0.979
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.983

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	397
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.0
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-152
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-136
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-127
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-122
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-120
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-110
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-109
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-108
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-108
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-104
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-103
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-102
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-102
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-100
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-99
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-95
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-95
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-95
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-95
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	5e-95
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	5e-93
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	9e-93
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-87
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-87
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	8e-86
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-85
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-83
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-79
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-75
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	5e-75
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-74
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	5e-74
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-73
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	8e-72
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-71
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-70
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-70
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	5e-70
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-67
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-66
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	8e-65
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-62
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-61
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-60
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-59
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-59
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-59
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	5e-58
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-57
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-56
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-53
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-53
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	7e-52
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	8e-52
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-51
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	6e-50
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	6e-50
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	7e-50
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	9e-50
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-47
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-44
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	9e-44
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-41
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-40
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-39
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-38
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-37
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-35
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-35
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-33
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-33
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-33
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-32
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-32
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	5e-32
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	8e-32
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-31
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	7e-31
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	9e-31
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	7e-30
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-30
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-29
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-29
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-29
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-29
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-29
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-28
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-27
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-27
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-27
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-27
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-27
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	7e-27
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-27
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-26
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-26
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-26
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	5e-26
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	6e-26
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	9e-26
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-25
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-24
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-24
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-24
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-24
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-24
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	4e-24
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-24
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-24
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	8e-24
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-23
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-23
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-23
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-23
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	9e-23
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-22
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-22
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-21
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-21
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	4e-21
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-21
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	5e-21
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	5e-21
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	6e-21
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-20
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-20
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-20
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-20
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-20
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-20
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-20
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	6e-20
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	8e-20
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-19
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-19
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-19
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-19
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-19
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-19
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-19
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-18
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-18
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-18
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	3e-18
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-18
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-18
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	4e-18
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	5e-18
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	5e-18
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	7e-18
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-17
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-17
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-17
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	5e-17
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	7e-17
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	8e-17
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	8e-17
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	9e-17
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-16
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-16
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	6e-16
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	7e-16
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-15
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-15
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-15
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-15
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-15
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-15
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-15
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	3e-15
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	3e-15
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	3e-15
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	4e-15
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	8e-15
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-14
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-14
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-14
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-14
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-14
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-14
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-14
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-14
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-14
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-14
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-14
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-14
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	6e-14
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	7e-14
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	7e-14
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	8e-14
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	9e-14
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	9e-14
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-13
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-13
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-13
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-13
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-13
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-13
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-13
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-13
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	4e-13
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-13
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-13
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	4e-13
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	5e-13
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-13
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	6e-13
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	7e-13
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	9e-13
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-12
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-12
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-12
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	3e-12
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-12
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-12
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	5e-12
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-12
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	5e-12
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	6e-12
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	6e-12
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	7e-12
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	7e-12
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	8e-12
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	9e-12
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-11
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-11
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-11
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-11
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-11
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-11
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-11
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-11
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-11
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-11
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	4e-11
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	5e-11
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	7e-11
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	9e-11
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-10
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-10
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-10
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-10
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-10
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	1e-10
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-10
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-10
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-10
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-10
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-10
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-10
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	5e-10
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	6e-10
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	8e-10
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-09
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-09
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	1e-09
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-09
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-09
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-09
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	3e-09
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-09
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	4e-09
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-09
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-09
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-09
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	5e-09
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-08
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-08
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-08
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	3e-08
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	4e-08
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	5e-08
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	5e-08
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	8e-08
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-07
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-07
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	3e-07
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	9e-07
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-06
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-06
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	3e-06
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	3e-06
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	9e-06
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	2e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-04
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	2e-04
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	3e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	3e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.001
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	0.001
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	0.004

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  557 bits (1438), Expect = 0.0
 Identities = 199/298 (66%), Positives = 237/298 (79%), Gaps = 3/298 (1%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE---GVNFTALREIKLLKELK 69
           RY K + LGEGTY VVYKA D +TG+ VAIKKI+LG++KE   G+NFTALREIKLL+ELK
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
            P+II L+D F HK N++LVFEFMETDLE VI++ +I L+PADIKSYM MTL+GL + H 
Sbjct: 61  HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS 120

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            W+LHRD+KPNNLLI S G LKLADFGLAR FGSP+R+ THQV  RWYRAPELLFGA+ Y
Sbjct: 121 NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHY 180

Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
           G GVD+W+ GCIFAELL R PFL G SDIDQLGKIF A GT T   WP +  LPDYVE++
Sbjct: 181 GVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFK 240

Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
                PL+ +FP+ASDDALDLL ++ T +P  RITA+QALEH YFS+ P PT P++LP
Sbjct: 241 PFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTPPSQLP 298

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  430 bits (1108), Expect = e-152
 Identities = 147/282 (52%), Positives = 187/282 (66%), Gaps = 1/282 (0%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y K E LGEGTYGVVYKA D KTG+ VA+KKIRL  ++EG+  TALREI LLKELK P+I
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNI 60

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L+D    +  L+LVFE+ + DL+  +      LSP  IKS M   L+GLA+CH   +L
Sbjct: 61  VKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRIL 120

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+KP N+LI   G LKLADFGLAR FG P R +TH+V   WYRAPE+L G+K Y   V
Sbjct: 121 HRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAV 180

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY-VEYQYVA 252
           D+W+ GCIFAE++  +P   G S+IDQL KIF   GT T   WP +  LPDY   +    
Sbjct: 181 DIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP 240

Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
              L  + P    + +DLLSKM  Y+P  RI+A++AL+H YF
Sbjct: 241 PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  391 bits (1006), Expect = e-136
 Identities = 167/283 (59%), Positives = 196/283 (69%), Gaps = 2/283 (0%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y K   +GEGTYGVVYKA D  TG+ VAIKKI+L  + EG+  TALREIKLLKEL  P+I
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           I+L+D F HKG+L+LVFEFM+TDL  +I++    L  + IKSY+   L+GLAFCH   +L
Sbjct: 61  IKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+KP NLLI + G LKLADFGLAR FGSP R +TH V  RWYRAPELL G K Y   V
Sbjct: 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPV 180

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY--VEYQYV 251
           D+W+ GCIFAELL+RRP   G S+IDQL KIF   GT  P  WP    L       +   
Sbjct: 181 DIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKK 240

Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           A  PL  LFP+AS  ALDLLS+M  YDP  RITA+QAL H YF
Sbjct: 241 AGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  368 bits (947), Expect = e-127
 Identities = 139/285 (48%), Positives = 190/285 (66%), Gaps = 3/285 (1%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           RY     +GEG +G+V+KA D +TG+TVA+KK+ L + + G+   ALREIK L+  + P+
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60

Query: 73  IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           +++L+D FPH     LV E+M +DL  V+R+    L  A +KSYM+M LKG+A+ H   +
Sbjct: 61  VVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-FTHQVFARWYRAPELLFGAKQYGA 191
           +HRD+KP NLLI + G LK+ADFGLAR+F   + R ++HQV  RWYRAPELL+GA++Y  
Sbjct: 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDP 180

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           GVD+WA GCIFAELLN  P   G +DI+QL  +F   GT     WP L  LPDY +  + 
Sbjct: 181 GVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFP 240

Query: 252 AAPP--LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + P  L  +FP AS +ALDLL  +  YDP  R++A +AL H YF
Sbjct: 241 ESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  354 bits (912), Expect = e-122
 Identities = 131/287 (45%), Positives = 184/287 (64%), Gaps = 6/287 (2%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y K   +GEGTYG VYKA + KTG+ VA+KKIR+  +KEG   TA+REIKLL++L+ P+I
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI 60

Query: 74  IELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L +      KG++++VFE+M+ DL  ++ +  +  + + IK YM+  L+GL + H   
Sbjct: 61  VRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG 120

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYG 190
           +LHRD+K +N+LI + G LKLADFGLAR +       +T++V   WYR PELL GA +YG
Sbjct: 121 ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYG 180

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VD+W+ GCI AEL   +P  QGS++++QL KIF   G+ T   WP ++ LP +   + 
Sbjct: 181 PEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP 240

Query: 251 VAAPP--LRSLFPSASD-DALDLLSKMFTYDPKARITAQQALEHRYF 294
                  LR  F    D  ALDLL K+ T DPK RI+A QAL+H YF
Sbjct: 241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  350 bits (901), Expect = e-120
 Identities = 150/283 (53%), Positives = 190/283 (67%), Gaps = 2/283 (0%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y K E +GEGTYGVVYKA D  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P+I
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI 60

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + L+D    +  L+LVFEF++ DL+  + ++    L P  IKSY+   L+G+A+CH   V
Sbjct: 61  VRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV 120

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           LHRD+KP NLLI   G LKLADFGLAR FG P R +TH+V   WYRAPE+L G++QY   
Sbjct: 121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTP 180

Query: 193 VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYV 251
           VD+W+ GCIFAE++NRRP   G S+IDQL +IF   GT     WP +  LPDY   +   
Sbjct: 181 VDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKW 240

Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           A   L  + P+  +D LDLLSKM  YDP  RI+A+ AL+H YF
Sbjct: 241 ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  324 bits (833), Expect = e-110
 Identities = 140/284 (49%), Positives = 185/284 (65%), Gaps = 3/284 (1%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y K E +GEGTYGVVYK  + KTGQ VA+KKIRL  ++EGV  TA+REI LLKEL+ P+I
Sbjct: 2   YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI 61

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L D    +  L+L+FEF+  DL+  + +     ++    +KSY+   L+G+ FCH + 
Sbjct: 62  VCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR 121

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G+ +Y  
Sbjct: 122 VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYST 181

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQY 250
            VD+W+ G IFAE+  ++P   G S+IDQL +IF   GT T   WP +  LPDY   +  
Sbjct: 182 PVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPK 241

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                LRS   +  +D LDLL KM  YDP  RI+A++AL H YF
Sbjct: 242 WKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  321 bits (826), Expect = e-109
 Identities = 128/288 (44%), Positives = 182/288 (63%), Gaps = 24/288 (8%)

Query: 22  EGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL----- 76
           EGTYGVVY+A D KTG+ VA+KK+++ K+KEG   T+LREI +L +L+ P+I+ +     
Sbjct: 15  EGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVV 74

Query: 77  ---IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
              +D       +++V E++E DL++++         +++K  M   L G+A  H  W+L
Sbjct: 75  GSNLD------KIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWIL 128

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K +NLL+ + G LK+ DFGLAR +GSP + +T  V   WYRAPELL GAK+Y   +
Sbjct: 129 HRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAI 188

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP-----DYVEY 248
           D+W+ GCIFAELL ++P   G S+IDQL KIF   GT T   WP  + LP      + +Y
Sbjct: 189 DMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKY 248

Query: 249 QYVAAPPLRSLFP--SASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            Y     LR  FP  S SD+  DLL+++ TYDP  RI+A+ AL+H YF
Sbjct: 249 PYN---QLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  321 bits (824), Expect = e-108
 Identities = 134/328 (40%), Positives = 194/328 (59%), Gaps = 28/328 (8%)

Query: 7   SKKVADRYL-KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE------------G 53
           S  +++RY+ K   LGEGTYG V KA DT TG+ VAIKK+++ +               G
Sbjct: 3   SFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCG 62

Query: 54  VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADI 113
           ++FT LRE+K++ E+K  +I+ L+D +     ++LV + M +DL+ V+ +  I L+ + +
Sbjct: 63  IHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVV-DRKIRLTESQV 121

Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG----------- 162
           K  +   L GL   HK + +HRD+ P N+ I S G  K+ADFGLAR +G           
Sbjct: 122 KCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKD 181

Query: 163 ---SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID 219
                    T +V   WYRAPELL GA++Y   VD+W+ GCIFAELL  +P   G ++ID
Sbjct: 182 ETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241

Query: 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDP 279
           QLG+IF   GT     WP    LP Y E+       L+++FP+ASDDA+DLL  +   +P
Sbjct: 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNP 301

Query: 280 KARITAQQALEHRYFSSAPLPTEPNKLP 307
             RI+A++AL+H YF S PLP +P++LP
Sbjct: 302 LERISAKEALKHEYFKSDPLPCDPSQLP 329

Length = 335

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  318 bits (816), Expect = e-108
 Identities = 141/281 (50%), Positives = 181/281 (64%), Gaps = 2/281 (0%)

Query: 16  KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P+I++
Sbjct: 4   KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 63

Query: 76  LIDAFPHKGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L+D    +  L+LVFEF+  DL+  +  + +  +    IKSY+   L+GLAFCH   VLH
Sbjct: 64  LLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLH 123

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y   VD
Sbjct: 124 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 183

Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY-VEYQYVAA 253
           +W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  LPDY   +   A 
Sbjct: 184 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWAR 243

Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                + P   +D  DLLS+M  YDP  RI+A+ AL H +F
Sbjct: 244 QDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  309 bits (792), Expect = e-104
 Identities = 143/287 (49%), Positives = 190/287 (66%), Gaps = 5/287 (1%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D+Y K E +GEGTYGVVYKA D  T +T+A+KKIRL ++ EGV  TA+REI LLKE++  
Sbjct: 2   DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFL-SPADIKSYMQMTLKGLAFCHKK 130
           +I+ L D    +  L+LVFE+++ DL+  + ++  F  +P  IK+Y+   L+G+A+CH  
Sbjct: 62  NIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH 121

Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+KP NLLI      LKLADFGLAR FG P R FTH+V   WYRAPE+L G++ Y
Sbjct: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 181

Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              VD+W+ GCIFAE++N++P   G S+ID+L KIF   GT     WP +  LPDY    
Sbjct: 182 STPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS-A 240

Query: 250 YVAAPP--LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           +   PP  L ++ P+     +DLLSKM   DP  RITA+ ALEH YF
Sbjct: 241 FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYF 287

Length = 294

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  307 bits (789), Expect = e-103
 Identities = 137/284 (48%), Positives = 180/284 (63%), Gaps = 2/284 (0%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y K E +GEGTYG V+KA + +T + VA+K++RL    EGV  +ALREI LLKELK  +
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60

Query: 73  IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I+ L D       L LVFE+ + DL+    + N  + P  +KS+M   LKGLAFCH   V
Sbjct: 61  IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV 120

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           LHRD+KP NLLI  +G+LKLADFGLAR FG P R ++ +V   WYR P++LFGAK Y   
Sbjct: 121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 180

Query: 193 VDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-QY 250
           +D+W+AGCIFAEL N  RP   G+   DQL +IF   GT T   WP ++ LPDY  Y  Y
Sbjct: 181 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMY 240

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            A   L ++ P  +    DLL  +   +P  RI+A++AL+H YF
Sbjct: 241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  305 bits (783), Expect = e-102
 Identities = 132/305 (43%), Positives = 179/305 (58%), Gaps = 23/305 (7%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
             Y     LGEGT+G VYKA   KTG+ VA+KKI +  +K+G   TALREIK+LK+LK P
Sbjct: 8   RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHP 67

Query: 72  HIIELID-AFPH-------KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +++ LID A          +G++++V  +M+ DL  ++ N ++ L+ + IK YM   L+G
Sbjct: 68  NVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEG 127

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-----------GSPDRRFTHQV 172
           + + H+  +LHRD+K  N+LI + G LK+ADFGLAR +           G   R++T+ V
Sbjct: 128 INYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLV 187

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT 232
             RWYR PELL G ++Y   VD+W  GC+FAE+  RRP LQG SDIDQL  IF   GT T
Sbjct: 188 VTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPT 247

Query: 233 PSQWPDLAYLPDYVEYQYVAA---PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289
              WP    LP   E  +        L   F     + LDLLSK+ + DP  R+TA  AL
Sbjct: 248 EETWPGWRSLPGC-EGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306

Query: 290 EHRYF 294
           EH YF
Sbjct: 307 EHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  303 bits (779), Expect = e-102
 Identities = 127/298 (42%), Positives = 182/298 (61%), Gaps = 4/298 (1%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K   +GEGTYG+VY+A DT +G+ VA+KK+R+  +++G+  ++LREI LL  L+ P+I
Sbjct: 9   FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNI 68

Query: 74  IELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +EL +     H  ++ LV E+ E DL +++ N     S + +K  M   L+GL + H+ +
Sbjct: 69  VELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF 128

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           ++HRD+K +NLL+   G LK+ADFGLAR +G P +  T +V   WYRAPELL G   Y  
Sbjct: 129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTT 188

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            +D+WA GCI AELL  +P L G S+I+QL  I    GT   S WP  + LP   ++   
Sbjct: 189 AIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLP 248

Query: 252 AAP--PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
             P   L+  FP  S+  L LL+ +  YDPK R TA++ALE  YF   PLP EP  +P
Sbjct: 249 KQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPEMMP 306

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  300 bits (770), Expect = e-100
 Identities = 122/305 (40%), Positives = 167/305 (54%), Gaps = 32/305 (10%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR-------LGKQKEGVNFTALREIKLL 65
           RY   + +G G YGVV  A+D +TG+ VAIKKI          K+        LREIKLL
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKR-------ILREIKLL 53

Query: 66  KELKSPHIIELIDAFPHKGN-----LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           + L+  +II L+D            +++V E METDL  VI+ +   L+   I+ ++   
Sbjct: 54  RHLRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIK-SPQPLTDDHIQYFLYQI 112

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FTHQVFARWY 177
           L+GL + H   V+HRD+KP+N+L+ S+  LK+ DFGLAR     +      T  V  RWY
Sbjct: 113 LRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWY 172

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           RAPELL  + +Y   +D+W+ GCIFAELL R+P   G   IDQL  I    GT +     
Sbjct: 173 RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE--- 229

Query: 238 DLAYLPD-----YVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
           DL ++       Y++        PL  LFP AS +A+DLL KM  +DPK RITA +AL H
Sbjct: 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289

Query: 292 RYFSS 296
            Y + 
Sbjct: 290 PYLAQ 294

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  296 bits (760), Expect = 1e-99
 Identities = 108/282 (38%), Positives = 151/282 (53%), Gaps = 29/282 (10%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   E LGEG++G VY A D KTG+ VAIK I+  K K+      LREIK+LK+LK P+I
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRE-RILREIKILKKLKHPNI 59

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + L D F  +  L+LV E+ E  DL  +++     LS  + + Y++  L  L + H K +
Sbjct: 60  VRLYDVFEDEDKLYLVMEYCEGGDLFDLLKK-RGRLSEDEARFYLRQILSALEYLHSKGI 118

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           +HRD+KP N+L+   G +KLADFGLAR     ++  T  V    Y APE+L G K YG  
Sbjct: 119 VHRDLKPENILLDEDGHVKLADFGLARQLDPGEKL-TTFVGTPEYMAPEVLLG-KGYGKA 176

Query: 193 VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
           VD+W+ G I  ELL  +P   G    DQL ++F   G   P   P               
Sbjct: 177 VDIWSLGVILYELLTGKPPFPGD---DQLLELFKKIGKPKPPFPPP-------------- 219

Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                      S +A DL+ K+   DP+ R+TA++AL+H +F
Sbjct: 220 -------EWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  287 bits (737), Expect = 1e-95
 Identities = 123/287 (42%), Positives = 171/287 (59%), Gaps = 18/287 (6%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-----EGVNFTALREIKLLKELKS-P 71
           + LG+GT+G VY A + +TG+ VAIKK+   K+K     E +N   LRE+K L++L   P
Sbjct: 5   KQLGDGTFGSVYLARNKETGELVAIKKM---KKKFYSWEECMN---LREVKSLRKLNEHP 58

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I++L + F     L+ VFE+ME +L  ++++      S + I+S +   L+GLA  HK 
Sbjct: 59  NIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH 118

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
              HRD+KP NLL+     +K+ADFGLAR I   P   +T  V  RWYRAPE+L  +  Y
Sbjct: 119 GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP--YTDYVSTRWYRAPEILLRSTSY 176

Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
            + VD+WA GCI AEL   RP   GSS+IDQL KI +  GT T   WP+   L   + ++
Sbjct: 177 SSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236

Query: 250 --YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               A   L  L P+AS +A+DL+  M  +DPK R TA QAL+H YF
Sbjct: 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  287 bits (735), Expect = 1e-95
 Identities = 127/284 (44%), Positives = 176/284 (61%), Gaps = 4/284 (1%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + + E LGEGTY  VYK  +  TG+ VA+K+I L  + EG   TA+REI L+KELK  +I
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENI 60

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETV--IRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L D    +  L LVFE+M+ DL+           L P  +KS+    LKG+AFCH+  
Sbjct: 61  VRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR 120

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LKLADFGLAR FG P   F+++V   WYRAP++L G++ Y  
Sbjct: 121 VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYST 180

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY-VEYQY 250
            +D+W+ GCI AE++  RP   G+++ DQL KIF   GT T S WP ++ LP+Y   +  
Sbjct: 181 SIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPR 240

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                L+ LFP A    +DLL ++   +P+ RI+A  AL+H +F
Sbjct: 241 YPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  286 bits (735), Expect = 2e-95
 Identities = 123/284 (43%), Positives = 169/284 (59%), Gaps = 12/284 (4%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIEL 76
           +GEG YG VYKA D  TG+ VA+KK+R+   +EG+  + LREI LLK+L+S   P+I+ L
Sbjct: 7   IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRL 66

Query: 77  ID--AFPHKGN---LHLVFEFMETDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +D    P       L LVFE ++ DL T +       L P  IK  M+  L+G+ F H  
Sbjct: 67  LDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH 126

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            ++HRD+KP N+L+ S GQ+K+ADFGLARI+   +   T  V   WYRAPE+L  +  Y 
Sbjct: 127 RIVHRDLKPQNILVTSDGQVKIADFGLARIYSF-EMALTSVVVTLWYRAPEVLLQS-SYA 184

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VD+W+ GCIFAEL  RRP  +G+S+ DQL KIF   G  +  +WP    LP    +  
Sbjct: 185 TPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLP-RSSFPS 243

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                 +S  P   ++ LDLL KM T++P  RI+A +AL+H YF
Sbjct: 244 YTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  284 bits (730), Expect = 4e-95
 Identities = 99/278 (35%), Positives = 140/278 (50%), Gaps = 23/278 (8%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
             LG G++G VYKA    TG+ VA+K ++   +K   + TA REI++L+ L  P+I+ LI
Sbjct: 5   RKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLI 64

Query: 78  DAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
           DAF  K +L+LV E+ E  DL   +       S  + K      L+GL + H   ++HRD
Sbjct: 65  DAFEDKDHLYLVMEYCEGGDLFDYLSRGGPL-SEDEAKKIALQILRGLEYLHSNGIIHRD 123

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +KP N+L+  +G +K+ADFGLA+         T  V   WY APE+L G   YG  VDVW
Sbjct: 124 LKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVW 183

Query: 197 AAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL 256
           + G I  ELL  +P   G + +DQL  I    G       P                   
Sbjct: 184 SLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKW----------------- 226

Query: 257 RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                S S++A DL+ K    DP  R TA++ L+H +F
Sbjct: 227 ----SSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score =  285 bits (732), Expect = 5e-95
 Identities = 123/289 (42%), Positives = 177/289 (61%), Gaps = 6/289 (2%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
            + Y K + LGEG+Y  VYK     TGQ VA+K+IRL + +EG  FTA+RE  LLK+LK 
Sbjct: 4   LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRL-EHEEGAPFTAIREASLLKDLKH 62

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +I+ L D    K  L LVFE+++TDL+  + +    LS  +++ ++   L+GLA+CH++
Sbjct: 63  ANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR 122

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI   G+LKLADFGLAR    P + ++++V   WYR P++L G+ +Y 
Sbjct: 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYS 182

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             +D+W  GCIF E+   RP   GS+D+ DQL KIF   GT T   WP ++  P++  Y 
Sbjct: 183 TSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS 242

Query: 250 YVAAPP--LRSLFPSASD--DALDLLSKMFTYDPKARITAQQALEHRYF 294
           +   PP  L +  P         +L  K   Y+PK RI+A +A++H YF
Sbjct: 243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  280 bits (719), Expect = 5e-93
 Identities = 133/294 (45%), Positives = 177/294 (60%), Gaps = 11/294 (3%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KS 70
           D Y K E +GEGTYG VYKA D  TG+ VA+KK RL   +EG+  TALREI LL+ L +S
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES 60

Query: 71  PHIIELIDAF-----PHKGNLHLVFEFMETDLETVI----RNTNIFLSPADIKSYMQMTL 121
            +I+ L+D         K +L+LVFE++++DL+  +    R     L    IKS+M   L
Sbjct: 61  IYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLL 120

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           KG+A CHK  V+HRD+KP NLL+    G LK+AD GL R F  P + +TH++   WYRAP
Sbjct: 121 KGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAP 180

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E+L G+  Y   VD+W+ GCIFAE+  ++P   G S++ QL  IF   GT T   WP ++
Sbjct: 181 EVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            L D+ E+       L    P  S + LDLL KM  YDP  RI+A+ AL H YF
Sbjct: 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  279 bits (717), Expect = 9e-93
 Identities = 119/288 (41%), Positives = 160/288 (55%), Gaps = 5/288 (1%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y    V+GEG YGVV K  +  TG+ VAIKK +  +  E V  TALRE+K+L++L+  
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I+ L +AF  KG L+LVFE++E  L  ++  +   L P  ++SY+   L+ +A+CH   
Sbjct: 61  NIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN 120

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
           ++HRD+KP N+L+   G LKL DFG AR +   P    T  V  RWYRAPELL G   YG
Sbjct: 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYG 180

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VDVWA GCI AELL+  P   G SDIDQL  I    G   PS     +  P +    +
Sbjct: 181 KPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF 240

Query: 251 VAAP---PLRSLFPSASDD-ALDLLSKMFTYDPKARITAQQALEHRYF 294
                   L   +P      ALD L      DPK R+T  + L+H YF
Sbjct: 241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  267 bits (684), Expect = 2e-87
 Identities = 123/299 (41%), Positives = 171/299 (57%), Gaps = 16/299 (5%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
            +Y K   +G+GT+G V+KA   KT Q VA+KK+ +  +KEG   TALREIK+L+ LK  
Sbjct: 12  SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHE 71

Query: 72  HIIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +++ LI+     A P+   KG+ +LVFEF E DL  ++ N N+  + ++IK  M+M L G
Sbjct: 72  NVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNG 131

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR----RFTHQVFARWYRA 179
           L + H+  +LHRDMK  N+LI   G LKLADFGLAR F         R+T++V   WYR 
Sbjct: 132 LYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRP 191

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PELL G + YG  +D+W AGCI AE+  R P +QG+++  QL  I    G+ TP  WP +
Sbjct: 192 PELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGV 251

Query: 240 AYLPDYVEYQYVA----APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             L  + + +           R         ALDL+ K+   DP  RI A  AL H +F
Sbjct: 252 DKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  266 bits (683), Expect = 3e-87
 Identities = 118/308 (38%), Positives = 166/308 (53%), Gaps = 34/308 (11%)

Query: 21  GEGTYGVVYKAI--DTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELI 77
           G GTYG VYKA   + K G+  AIKK +  K Q  G++ +A REI LL+ELK  +++ L+
Sbjct: 9   GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLV 68

Query: 78  DAFPHKGN--LHLVFEFMETDLETVI----RNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + F    +  ++L+F++ E DL  +I    +   + + P+ +KS +   L G+ + H  W
Sbjct: 69  EVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW 128

Query: 132 VLHRDMKPNNLLIGS----HGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLF 184
           VLHRD+KP N+L+       G +K+ D GLAR+F +P +        V   WYRAPELL 
Sbjct: 129 VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLL 188

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---------IDQLGKIFAAFGTATPSQ 235
           GA+ Y   +D+WA GCIFAELL   P  +G             DQL +IF   GT T   
Sbjct: 189 GARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKD 248

Query: 236 WPDLAYLPDY---VEYQYVAAPPLRSL------FPSASDDALDLLSKMFTYDPKARITAQ 286
           WPD+  +P+Y   ++       P  SL               DLL K+  YDP  RITA+
Sbjct: 249 WPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAE 308

Query: 287 QALEHRYF 294
           +ALEH YF
Sbjct: 309 EALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  262 bits (672), Expect = 8e-86
 Identities = 127/299 (42%), Positives = 181/299 (60%), Gaps = 17/299 (5%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           K+  D++     +GEGTYG VYKA D  TG+ VA+KK+RL  +KEG   TA+REIK+L++
Sbjct: 3   KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ 62

Query: 68  LKSPHIIEL----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYM 117
           L   +I+ L          +D    KG  +LVFE+M+ DL  ++ +  +  S   IKS+M
Sbjct: 63  LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFM 122

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-FTHQVFARW 176
           +  L+GL +CHKK  LHRD+K +N+L+ + GQ+KLADFGLAR++ S + R +T++V   W
Sbjct: 123 KQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLW 182

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
           YR PELL G ++YG  +DVW+ GCI  EL  ++P  Q + ++ QL  I    G+  P+ W
Sbjct: 183 YRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242

Query: 237 PDLAYLPDY----VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
           PD+  LP +     + QY     LR  F      ALDLL  M T DP  R TA++AL  
Sbjct: 243 PDVIKLPYFNTMKPKKQYRRR--LREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  263 bits (674), Expect = 1e-85
 Identities = 127/330 (38%), Positives = 181/330 (54%), Gaps = 43/330 (13%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-------- 59
           K +  +Y   + LG+G YG+V+KAID +T + VA+KKI          F A         
Sbjct: 3   KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKI----------FDAFRNATDAQR 52

Query: 60  --REIKLLKELKS-PHIIELIDAFPHKGN--LHLVFEFMETDLETVIRNTNIFLSPADIK 114
             REI  L+EL   P+I++L++    + +  ++LVFE+METDL  VIR  NI L     +
Sbjct: 53  TFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIR-ANI-LEDVHKR 110

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-------GSPDRR 167
             M   LK L + H   V+HRD+KP+N+L+ S  ++KLADFGLAR          +P   
Sbjct: 111 YIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPV-- 168

Query: 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
            T  V  RWYRAPE+L G+ +Y  GVD+W+ GCI  E+L  +P   G+S ++QL KI   
Sbjct: 169 LTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEV 228

Query: 228 FGTATPSQWPDLAYL-PDYVEYQYVAAP-----PLRSLFPSASDDALDLLSKMFTYDPKA 281
            G  +     D+  +   +      + P     PL  L P ASDDALDLL K+  ++P  
Sbjct: 229 IGPPSAE---DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNK 285

Query: 282 RITAQQALEHRYFSSAPLPTEPNKLPRPAT 311
           R+TA++ALEH Y +    P++   LP P T
Sbjct: 286 RLTAEEALEHPYVAQFHNPSDEPVLPYPIT 315

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  256 bits (657), Expect = 1e-83
 Identities = 123/288 (42%), Positives = 165/288 (57%), Gaps = 7/288 (2%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y K   +GEG+YGVV+K  + +TGQ VAIKK    +    +   ALREI++LK+LK P
Sbjct: 1   EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHP 60

Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++ LI+ F  K  LHLVFE+ + T L  + +N    +    IK  +  TL+ + FCHK 
Sbjct: 61  NLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCHKH 119

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
             +HRD+KP N+LI   GQ+KL DFG ARI   P   +T  V  RWYRAPELL G  QYG
Sbjct: 120 NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYG 179

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VDVWA GC+FAELL  +P   G SD+DQL  I    G   P +   +     + +   
Sbjct: 180 PPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIP-RHQQIFSTNQFFKGLS 238

Query: 251 VAAP----PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           +  P    PL S FP+ S  AL  L      DP  R++ ++ LEH YF
Sbjct: 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  247 bits (632), Expect = 2e-79
 Identities = 118/323 (36%), Positives = 170/323 (52%), Gaps = 35/323 (10%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA-------LRE 61
            V  RY   E +G G YGVV  AIDT++G+ VAIKKI          F         LRE
Sbjct: 2   DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKI-------PHAFDVPTLAKRTLRE 54

Query: 62  IKLLKELKSPHIIELIDAFPHKGNL----HLVFEFMETDLETVIRNTNIFLSPADIKSYM 117
           +K+L+  K  +II + D     G      ++V + ME+DL  +I  ++  L+   I+ ++
Sbjct: 55  LKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIH-SDQPLTEEHIRYFL 113

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD---RRFTHQVF 173
              L+GL + H   V+HRD+KP+NLL+    +L++ DFG+AR +  SP       T  V 
Sbjct: 114 YQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVA 173

Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
            RWYRAPELL    +Y   +D+W+ GCIFAE+L RR    G + + QL  I +  G  +P
Sbjct: 174 TRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG--SP 231

Query: 234 SQ------WPDLAYLPDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
           S+        D      Y++        P   +FP AS +ALDLLS+M  +DP+ RIT +
Sbjct: 232 SEEVLNRIGSDRVR--KYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVE 289

Query: 287 QALEHRYFSSAPLPT-EPNKLPR 308
           QAL+H + +    P  EP   P 
Sbjct: 290 QALQHPFLAQYHDPDDEPTCPPP 312

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score =  235 bits (600), Expect = 3e-75
 Identities = 129/289 (44%), Positives = 170/289 (58%), Gaps = 6/289 (2%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           A  YL  E LGEG+Y  VYK I    GQ VA+K I + K +EGV FTA+RE  LLK LK 
Sbjct: 4   ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISM-KTEEGVPFTAIREASLLKGLKH 62

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +I+ L D    K  L  VFE+M TDL   +      L P +++ +M   L+GLA+ H +
Sbjct: 63  ANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ 122

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            +LHRD+KP NLLI   G+LKLADFGLAR    P + ++ +V   WYR P++L GA  Y 
Sbjct: 123 HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYS 182

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQWPDLAYLPDY-VEY 248
           + +D+W AGCIF E+L  +P   G SD+ +QL KI+   G  T   WP ++ LP+Y  E+
Sbjct: 183 SALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW 242

Query: 249 QYVAAPP-LRSLFP--SASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                P  LR ++   S    A DL S+M    PK RI+AQ AL H YF
Sbjct: 243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score =  234 bits (598), Expect = 5e-75
 Identities = 116/285 (40%), Positives = 172/285 (60%), Gaps = 3/285 (1%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + Y+K + LGEGTY  V+K     T   VA+K+IRL + +EG   TA+RE+ LLK LK  
Sbjct: 5   ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKNLKHA 63

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I+ L D    +  L LVFE++++DL+  + N    +S  ++K +M   L+GL++CHK+ 
Sbjct: 64  NIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK 123

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           +LHRD+KP NLLI   G+LKLADFGLAR    P + ++++V   WYR P++L G+ +Y  
Sbjct: 124 ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYST 183

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            +D+W  GCI  E+   RP   GS+  ++L  IF   GT T   WP +    ++  Y + 
Sbjct: 184 PIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFP 243

Query: 252 A--APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
              A PL +  P    D +DLLS +  Y+ K+RI+A+ AL H YF
Sbjct: 244 QYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  234 bits (600), Expect = 2e-74
 Identities = 123/333 (36%), Positives = 174/333 (52%), Gaps = 34/333 (10%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A    TG  VAIKKI    + +      LREIK+L+  K
Sbjct: 3   VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKIS-PFEHQTFCQRTLREIKILRRFK 61

Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II ++D     +F    ++++V E METDL  +I+  +  LS   I+ ++   L+GL
Sbjct: 62  HENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQH--LSNDHIQYFLYQILRGL 119

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRF-THQVFARWYRAPE 181
            + H   VLHRD+KP+NLL+ ++  LK+ DFGLARI         F T  V  RWYRAPE
Sbjct: 120 KYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPE 179

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           ++  +K Y   +D+W+ GCI AE+L+ RP   G   + QL  I    G  TPSQ  DL  
Sbjct: 180 IMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLG--TPSQ-EDLNC 236

Query: 242 LP-----DYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY-- 293
           +      +Y++   +    P   LFP+A   ALDLL KM T++P  RIT ++AL H Y  
Sbjct: 237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLE 296

Query: 294 ---------FSSAPLPTE---PNKLPRPATKRA 314
                     +  P P +    + LP+   K  
Sbjct: 297 QYHDPSDEPVAEEPFPFDFELFDDLPKEKLKEL 329

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score =  232 bits (593), Expect = 5e-74
 Identities = 117/298 (39%), Positives = 177/298 (59%), Gaps = 5/298 (1%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + Y+K + LGEGTY  VYK     T   VA+K+IRL + +EG   TA+RE+ LLK+LK  
Sbjct: 6   ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHA 64

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I+ L D    + +L LVFE+++ DL+  + +    ++  ++K ++   L+GL +CH++ 
Sbjct: 65  NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK 124

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LKLADFGLAR    P + ++++V   WYR P++L G+  Y  
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYST 184

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY- 250
            +D+W  GCIF E+   RP   GS+  +QL  IF   GT T   WP +    ++  Y Y 
Sbjct: 185 QIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYP 244

Query: 251 -VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
              A  L +  P    D  +LLSK+  ++ + RI+A++A++H YF    L    +KLP
Sbjct: 245 KYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC--LGERIHKLP 300

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score =  230 bits (588), Expect = 3e-73
 Identities = 119/298 (39%), Positives = 181/298 (60%), Gaps = 5/298 (1%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + Y+K E LGEGTY  V+K     T   VA+K+IRL + +EG   TA+RE+ LLK+LK  
Sbjct: 6   ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHA 64

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I+ L D      +L LVFE+++ DL+  + +    +S  ++K ++   L+GLA+CH++ 
Sbjct: 65  NIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK 124

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LKLADFGLAR    P + ++++V   WYR P++L G+ +Y  
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYST 184

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY- 250
            +D+W  GCIF E+ + RP   GS+  D+L  IF   GT T   WP ++   ++  Y + 
Sbjct: 185 QIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFP 244

Query: 251 -VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
                PL +  P    + ++LL+K   Y+ K RI+A++A++H YF S  L T  + LP
Sbjct: 245 KYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS--LGTRIHSLP 300

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  226 bits (577), Expect = 8e-72
 Identities = 113/292 (38%), Positives = 161/292 (55%), Gaps = 15/292 (5%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y    ++GEG+YG+V K    +TGQ VAIKK    +  + V   A+REI++LK+L+  
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60

Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++ LI+ F  K  L+LVFEF++ T L+ + +  N  L  + ++ Y+   L+G+ FCH  
Sbjct: 61  NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHSH 119

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            ++HRD+KP N+L+   G +KL DFG AR   +P   +T  V  RWYRAPELL G  +YG
Sbjct: 120 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYG 179

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP------SQWPDLA--YL 242
             VD+WA GC+  E+L   P   G SDIDQL  I    G   P       + P  A   L
Sbjct: 180 RAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL 239

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           P+  E       PL   FP  S   LDL  +    DP  R ++ Q L H +F
Sbjct: 240 PEVKE-----IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  226 bits (579), Expect = 2e-71
 Identities = 113/300 (37%), Positives = 166/300 (55%), Gaps = 19/300 (6%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALREIKLLKE 67
           V  +Y+  + +G G YG+V  A +++T + VAIKKI      +        LREIKLL+ 
Sbjct: 3   VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKI--ANAFDNRIDAKRTLREIKLLRH 60

Query: 68  LKSPHIIELIDAF--PHKGN---LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           L   ++I + D    PH+     +++V+E M+TDL  +IR++   LS    + ++   L+
Sbjct: 61  LDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQT-LSDDHCQYFLYQLLR 119

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   VLHRD+KP+NLL+ ++  LK+ DFGLAR         T  V  RWYRAPEL
Sbjct: 120 GLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPEL 179

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           L    +Y   +DVW+ GCIFAELL R+P   G   + QL  I    G+ +     DL ++
Sbjct: 180 LLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE---DLGFI 236

Query: 243 PDYVEYQYVAAPP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
            +    +Y+ + P         LFP A+  A+DLL KM  +DP  RIT ++AL H Y +S
Sbjct: 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  222 bits (569), Expect = 1e-70
 Identities = 117/288 (40%), Positives = 153/288 (53%), Gaps = 25/288 (8%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKELKS-PHII 74
           +GEGT+  V KA   KTG+  AIK +   K+     E VN   LREI+ L+ L   P+I+
Sbjct: 7   IGEGTFSEVLKAQSRKTGKYYAIKCM---KKHFKSLEQVN--NLREIQALRRLSPHPNIL 61

Query: 75  ELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
            LI+       G L LVFE M+ +L  +I+     L    +KSYM   LK L   H+  +
Sbjct: 62  RLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
            HRD+KP N+LI     LKLADFG  R I+  P   +T  +  RWYRAPE L     YG 
Sbjct: 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKPP--YTEYISTRWYRAPECLLTDGYYGP 178

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            +D+WA GC+F E+L+  P   G++++DQ+ KI    GT        L          Y 
Sbjct: 179 KMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEV---LKKFRKSRHMNY- 234

Query: 252 AAPP-----LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             P      LR L P+AS + LDLL K+  YDP  RITA+QAL H YF
Sbjct: 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score =  223 bits (570), Expect = 4e-70
 Identities = 116/296 (39%), Positives = 161/296 (54%), Gaps = 27/296 (9%)

Query: 20  LGEGTYGVVYKA--IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIEL 76
           LG+G YG+V  A   +T   +TVAIKKI     K+ +   ALRE+KLL+  +   +I  L
Sbjct: 8   LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCL 67

Query: 77  ID---AFPHKGN-LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
            D    FP   N L+L  E ME DL  +IR +   L+ A  +S++   L GL + H   V
Sbjct: 68  YDMDIVFPGNFNELYLYEELMEADLHQIIR-SGQPLTDAHFQSFIYQILCGLKYIHSANV 126

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLAR----IFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
           LHRD+KP NLL+ +  +LK+ DFGLAR      G      T  V  RWYRAPE++   + 
Sbjct: 127 LHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQS 186

Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT---------ATPSQWPDL 239
           Y   +DVW+ GCI AELL R+P  +G   +DQL +I    GT          +P     +
Sbjct: 187 YTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYI 246

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             LP+  +       P  S+FP+A+  ALDLL K+  +DP  RI+ ++ALEH Y +
Sbjct: 247 RSLPNIPKK------PFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score =  222 bits (566), Expect = 5e-70
 Identities = 122/293 (41%), Positives = 170/293 (58%), Gaps = 6/293 (2%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           AD Y K E LGEG+Y  VYK      G+ VA+K IRL +++EG  FTA+RE  LLK LK 
Sbjct: 4   ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRL-QEEEGTPFTAIREASLLKGLKH 62

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +I+ L D    K  L LVFE++ TDL   +      L P ++K ++   L+GL++ H++
Sbjct: 63  ANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR 122

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
           ++LHRD+KP NLLI   G+LKLADFGLAR    P   ++++V   WYR P++L G+ +Y 
Sbjct: 123 YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYS 182

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             +D+W  GCIF E++       G  DI DQL +IF   GT     WP +  LP +   +
Sbjct: 183 TCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER 242

Query: 250 YV--AAPPLRSLFPSAS--DDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
           +   +   LR  +   S  + A DL SK+    PK R++AQ AL H YFS  P
Sbjct: 243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  214 bits (546), Expect = 3e-67
 Identities = 113/284 (39%), Positives = 164/284 (57%), Gaps = 12/284 (4%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIEL 76
           +G G YG VYKA D  +G  VA+K +R+   ++G+  + +RE+ LLK L++   P+I+ L
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67

Query: 77  IDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +D         +  + LVFE ++ DL T +        PA+ IK  M+  L+GL F H  
Sbjct: 68  MDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN 127

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            ++HRD+KP N+L+ S GQ+KLADFGLARI+ S     T  V   WYRAPE+L  +  Y 
Sbjct: 128 CIVHRDLKPENILVTSGGQVKLADFGLARIY-SCQMALTPVVVTLWYRAPEVLLQST-YA 185

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VD+W+ GCIFAE+  R+P   G+S+ DQLGKIF   G      WP    LP    +  
Sbjct: 186 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRG-AFSP 244

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               P++S+ P   +    LL +M T++P  RI+A +AL+H +F
Sbjct: 245 RGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  213 bits (544), Expect = 5e-66
 Identities = 112/313 (35%), Positives = 156/313 (49%), Gaps = 18/313 (5%)

Query: 4   VDLSKK---VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
            +L+K    V DRY     +G G YG V  A DTKTG+ VAIKK+    Q         R
Sbjct: 4   QELNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYR 63

Query: 61  EIKLLKELKSPHIIELIDAF-PHKGN-----LHLVFEFMETDLETVIRNTNIFLSPADIK 114
           E++LLK +   ++I L+D F P         ++LV   M  DL  +++     LS   I+
Sbjct: 64  ELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQK--LSDDHIQ 121

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174
             +   L+GL + H   ++HRD+KP+N+ +    +LK+ DFGLAR     D   T  V  
Sbjct: 122 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR---HTDDEMTGYVAT 178

Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           RWYRAPE++     Y   VD+W+ GCI AELL  +    GS  IDQL +I    GT    
Sbjct: 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238

Query: 235 --QWPDLAYLPDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
             Q        +Y++    +     + +F  A+  A+DLL KM   DP  RITA +AL H
Sbjct: 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298

Query: 292 RYFSSAPLPT-EP 303
            Y +    P  EP
Sbjct: 299 PYLAEYHDPEDEP 311

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score =  208 bits (530), Expect = 8e-65
 Identities = 114/285 (40%), Positives = 160/285 (56%), Gaps = 13/285 (4%)

Query: 20  LGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIE 75
           +GEG YG V+KA D K G + VA+K++R+   +EG+  + +RE+ +L+ L++   P+++ 
Sbjct: 9   IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68

Query: 76  LIDAFP-----HKGNLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHK 129
           L D         +  L LVFE ++ DL T +       +    IK  M   L+GL F H 
Sbjct: 69  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 128

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+KP N+L+ S GQ+KLADFGLARI+ S     T  V   WYRAPE+L  +  Y
Sbjct: 129 HRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAPEVLLQS-SY 186

Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              VD+W+ GCIFAE+  R+P  +GSSD+DQLGKI    G      WP    LP    + 
Sbjct: 187 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-FH 245

Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             +A P+        +   DLL K  T++P  RI+A  AL H YF
Sbjct: 246 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  203 bits (518), Expect = 3e-62
 Identities = 124/315 (39%), Positives = 173/315 (54%), Gaps = 22/315 (6%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           RY  +EV+G+G+YGVV  AIDT TG+ VAIKKI    +        LREIKLL+ L+ P 
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD 60

Query: 73  IIEL--IDAFPHK---GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           I+E+  I   P +    ++++VFE ME+DL  VI+  N  L+P   + ++   L+ L + 
Sbjct: 61  IVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIK-ANDDLTPEHHQFFLYQLLRALKYI 119

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRF-THQVFARWYRAPELL- 183
           H   V HRD+KP N+L  +  +LK+ DFGLAR+    +P   F T  V  RWYRAPEL  
Sbjct: 120 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 179

Query: 184 -FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL--- 239
            F +K Y   +D+W+ GCIFAE+L  +P   G + + QL  I    GT +P     +   
Sbjct: 180 SFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE 238

Query: 240 ---AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
               YL    + Q V   P    FP+A   AL LL ++  +DPK R TA++AL   YF  
Sbjct: 239 KARRYLSSMRKKQPV---PFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG 295

Query: 297 -APLPTEPNKLPRPA 310
            A +  EP+  P   
Sbjct: 296 LAKVEREPSAQPITK 310

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  195 bits (498), Expect = 7e-61
 Identities = 72/188 (38%), Positives = 108/188 (57%), Gaps = 3/188 (1%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LGEG +G VY A D KTG+ VAIK I+       +    LREI++LK+L  P+I++L   
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEE-LLREIEILKKLNHPNIVKLYGV 59

Query: 80  FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F  + +L+LV E+ E   L+ +++     LS  +I   +   L+GL + H   ++HRD+K
Sbjct: 60  FEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLK 119

Query: 139 PNNLLIGS-HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
           P N+L+ S +G++KLADFGL+++  S        V    Y APE+L G   Y    D+W+
Sbjct: 120 PENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWS 179

Query: 198 AGCIFAEL 205
            G I  EL
Sbjct: 180 LGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  198 bits (504), Expect = 3e-60
 Identities = 109/300 (36%), Positives = 156/300 (52%), Gaps = 21/300 (7%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           ++ +RY   + +G G YG V  AID +TG+ VAIKK+    Q E     A RE+ LLK +
Sbjct: 12  ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM 71

Query: 69  KSPHIIELIDAFPHKGNLH------LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           +  ++I L+D F    +        LV  +M+TDL+ ++ +    LS   ++  +   L 
Sbjct: 72  QHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHP---LSEDKVQYLVYQMLC 128

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 129 GLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPEV 185

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AE+L  +   +G   +DQL +I    G   P     +  L
Sbjct: 186 ILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEF---VQKL 242

Query: 243 PDYVEYQYVAAPP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
            D     Y+ + P        +LFP AS  A+DLL KM   D   R+TA +ALEH YF S
Sbjct: 243 EDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDS 302

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  194 bits (493), Expect = 2e-59
 Identities = 107/281 (38%), Positives = 154/281 (54%), Gaps = 6/281 (2%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           V+GEG YGVV K    +T + VAIKK +  ++ E V  T LRE+K+L+ LK  +I+EL +
Sbjct: 8   VVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKE 67

Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           AF  +G L+LVFE++E ++  ++      + P  ++SY+   +K + +CHK  ++HRD+K
Sbjct: 68  AFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIK 127

Query: 139 PNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
           P NLLI  +  LKL DFG AR +    +  +T  V  RWYR+PELL GA  YG  VD+W+
Sbjct: 128 PENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP-YGKAVDMWS 186

Query: 198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY--VEYQYVAAPP 255
            GCI  EL + +P   G S+IDQL  I    G     Q       P +  + +  V  P 
Sbjct: 187 VGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQ 246

Query: 256 L--RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
              R      S   LDL+  +   +P  R   +Q L H  F
Sbjct: 247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  195 bits (497), Expect = 3e-59
 Identities = 111/303 (36%), Positives = 164/303 (54%), Gaps = 18/303 (5%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + +RY+  + +G G +G+V  A D  TGQ VAIKKI        +     RE+KLLK L+
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR 67

Query: 70  SPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             +II L D F  P + +++ V E + TDL  ++ +    L    I+ ++   L+GL + 
Sbjct: 68  HENIISLSDIFISPLE-DIYFVTELLGTDLHRLLTSRP--LEKQFIQYFLYQILRGLKYV 124

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H   V+HRD+KP+N+LI  +  LK+ DFGLARI    D + T  V  R+YRAPE++   +
Sbjct: 125 HSAGVVHRDLKPSNILINENCDLKICDFGLARI---QDPQMTGYVSTRYYRAPEIMLTWQ 181

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT------ATPSQWPDLAY 241
           +Y   VD+W+AGCIFAE+L  +P   G   ++Q   I    GT       T      L +
Sbjct: 182 KYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
           +    + + V   P    F +A   A+DLL KM  +DP+ RI+A +AL H Y +    PT
Sbjct: 242 VQSLPKREPV---PFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPT 298

Query: 302 -EP 303
            EP
Sbjct: 299 DEP 301

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  195 bits (497), Expect = 3e-59
 Identities = 117/311 (37%), Positives = 165/311 (53%), Gaps = 20/311 (6%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V DRY   + +G G YG V  A+D +TG  VAIKK+    Q E     A RE++LLK +
Sbjct: 12  EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 71

Query: 69  KSPHIIELIDAFPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F    +L      +LV  FM TDL  ++++    LS   I+  +   LK
Sbjct: 72  KHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEK--LSEDRIQFLVYQMLK 129

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 130 GLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QTDSEMTGYVVTRWYRAPEV 186

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AE+L  +P  +G   +DQL +I     T TPS+   +  L
Sbjct: 187 ILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKV--TGTPSK-EFVQKL 243

Query: 243 PDYVEYQYVAAPP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                  YV   P       RSL P+A+  A+++L KM   D ++RITA +AL H YF  
Sbjct: 244 QSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303

Query: 297 APLPTEPNKLP 307
              P +  + P
Sbjct: 304 FHDPEDETEAP 314

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  193 bits (492), Expect = 5e-58
 Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 23/290 (7%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G +GVV+   D + G+ VA+KK+    Q         RE+K+L   K  +++  +D 
Sbjct: 8   IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDI 67

Query: 80  F--PHKGNLHLVF---EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
              PH      ++   E M++DL  +I  +   LS   +K ++   L+GL + H   +LH
Sbjct: 68  LQPPHIDPFEEIYVVTELMQSDLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILH 126

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAG 192
           RD+KP NLL+ S+  LK+ DFGLAR+   PD  +  T +V  ++YRAPE+L G++ Y + 
Sbjct: 127 RDIKPGNLLVNSNCVLKICDFGLARV-EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSA 185

Query: 193 VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD-----LAYLPDYVE 247
           VD+W+ GCIFAELL RR   Q  S I QL  I    GT +            A++     
Sbjct: 186 VDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHI----- 240

Query: 248 YQYVAAPPLRS----LFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
            +    PP       L   A+ +A+ LL +M  +DP  RI+A  AL H Y
Sbjct: 241 LRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score =  190 bits (485), Expect = 2e-57
 Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 30/306 (9%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           RY+    LG G+ G+V+ A+D+   + VA+KKI L    + V   ALREIK+++ L   +
Sbjct: 6   RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVL-TDPQSVK-HALREIKIIRRLDHDN 63

Query: 73  IIELIDAFPHKGN--------------LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           I+++ +     G+              +++V E+METDL  V+      LS    + +M 
Sbjct: 64  IVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGP--LSEEHARLFMY 121

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQ------ 171
             L+GL + H   VLHRD+KP N+ I +    LK+ DFGLARI    D  ++H+      
Sbjct: 122 QLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIV---DPHYSHKGYLSEG 178

Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231
           +  +WYR+P LL     Y   +D+WAAGCIFAE+L  +P   G+ +++Q+  I  +    
Sbjct: 179 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238

Query: 232 TPSQWPD-LAYLPDYV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289
                 + L  +P +V         PLR L P  + +ALD L ++ T++P  R+TA++AL
Sbjct: 239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL 298

Query: 290 EHRYFS 295
            H Y S
Sbjct: 299 MHPYMS 304

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  183 bits (468), Expect = 9e-56
 Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 42/292 (14%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKELKSP 71
            + + E+LG G++G VY A+D  TG+ +A+K + L    E     AL REI++L  L+ P
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE-EELEALEREIRILSSLQHP 59

Query: 72  HIIELIDAF--PHKGNLHLVFEFM-ETDLETVIRNTNIF--LSPADIKSYMQMTLKGLAF 126
           +I+    +     K  L++  E++    L ++++    F  L    I+ Y +  L+GLA+
Sbjct: 60  NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKK---FGKLPEPVIRKYTRQILEGLAY 116

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQVF--ARWYRAPELL 183
            H   ++HRD+K  N+L+ S G +KLADFG A+  G  +    T  V     W  APE++
Sbjct: 117 LHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWM-APEVI 175

Query: 184 FGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
            G ++YG   D+W+ GC   E+   + P+ +  + +  L KI        P        +
Sbjct: 176 RG-EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKI--GSSGEPP-------EI 225

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           P+++                 S++A D L K    DPK R TA + L+H + 
Sbjct: 226 PEHL-----------------SEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  178 bits (454), Expect = 1e-53
 Identities = 81/290 (27%), Positives = 137/290 (47%), Gaps = 48/290 (16%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y   + +G+G++G VY       G+   +K+I L    E     AL E+K+LK+L  P+
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 73  IIELIDAFPHKGNLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYM-QMTLKGLAFC 127
           II+  ++F  KG L +V E+ +  DL   I+             I  +  Q+ L  L + 
Sbjct: 61  IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCL-ALKYL 119

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR------WYRAPE 181
           H + +LHRD+KP N+ + S+G +KL DFG++++  S          A+      +Y +PE
Sbjct: 120 HSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS------TVDLAKTVVGTPYYLSPE 173

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           L    K Y    D+W+ GC+  EL   + PF +G + ++   KI                
Sbjct: 174 LCQN-KPYNYKSDIWSLGCVLYELCTLKHPF-EGENLLELALKI---------------- 215

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                ++ QY   PP+ S +   S +  +L+S +   DP+ R +  Q L+
Sbjct: 216 -----LKGQY---PPIPSQY---SSELRNLVSSLLQKDPEERPSIAQILQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  180 bits (457), Expect = 5e-53
 Identities = 93/339 (27%), Positives = 139/339 (41%), Gaps = 38/339 (11%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF-TALREIKLLKELKSP- 71
           Y     LGEG++G VY A D K    VA+K +    + +       LREI++L  L  P 
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRN--TNIFLSPADIKSYMQMTLKGLAFCH 128
           +I++L D F  +G+L+LV E+++   LE +++       LS ++    +   L  L + H
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 129 KKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFA------RWYRAPE 181
            K ++HRD+KP N+L+   G  +KL DFGLA++   P    +             Y APE
Sbjct: 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE 178

Query: 182 LLFG--AKQYGAGVDVWAAGCIFAELLN-RRPF--LQGSSDIDQLGKIFAAFGTATPSQW 236
           +L G       +  D+W+ G    ELL    PF   + SS   Q  KI     T      
Sbjct: 179 VLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT------ 232

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                         +A+P   S     S  A DLL K+   DPK R+++   L H   + 
Sbjct: 233 ------------PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH 280

Query: 297 APLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKT 335
             L              A       P     + S     
Sbjct: 281 LKLKESDLSDLLKPDDSAPLRLSLPPSLEALISSLNSLA 319

Length = 384

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score =  176 bits (447), Expect = 7e-52
 Identities = 110/312 (35%), Positives = 154/312 (49%), Gaps = 21/312 (6%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 14  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 73

Query: 69  KSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 74  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 131

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 132 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 188

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        L  +
Sbjct: 189 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL---LKKI 245

Query: 243 PDYVEYQYVAAPP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                  Y+ +          ++F  A+  A+DLL KM   D   RITA QAL H YF+ 
Sbjct: 246 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305

Query: 297 APLP-TEPNKLP 307
              P  EP   P
Sbjct: 306 YHDPDDEPVADP 317

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score =  176 bits (448), Expect = 8e-52
 Identities = 112/311 (36%), Positives = 157/311 (50%), Gaps = 38/311 (12%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT----ALREIKLL 65
           V  RY   + +G G  G+V  A DT TGQ VAIKK+     +   N T    A RE+ L+
Sbjct: 14  VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKL----SRPFQNVTHAKRAYRELVLM 69

Query: 66  KELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYM-- 117
           K +   +II L++ F P K      +++LV E M+ +L  VI    + L    + SY+  
Sbjct: 70  KLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVI---QMDLDHERM-SYLLY 125

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
           QM L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+Y
Sbjct: 126 QM-LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYY 183

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           RAPE++ G   Y   VD+W+ GCI  E++       G+  IDQ  KI    GT +     
Sbjct: 184 RAPEVILGMG-YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242

Query: 238 DLAY-LPDYVE----YQYVAAPPL--RSLFPSASDD--------ALDLLSKMFTYDPKAR 282
            L   + +YVE    Y   +   L    LFP  S+         A DLLSKM   DP+ R
Sbjct: 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKR 302

Query: 283 ITAQQALEHRY 293
           I+   AL+H Y
Sbjct: 303 ISVDDALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  174 bits (442), Expect = 4e-51
 Identities = 105/309 (33%), Positives = 158/309 (51%), Gaps = 15/309 (4%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DT+  Q VA+KK+    Q         RE++LLK +
Sbjct: 12  EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM 71

Query: 69  KSPHIIELIDAFPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F    ++      +LV   M  DL  +++     LS   ++  +   L+
Sbjct: 72  KHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQK--LSDEHVQFLIYQLLR 129

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+N+ +    +L++ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 130 GLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADDEMTGYVATRWYRAPEI 186

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA-- 240
           +     Y   VD+W+ GCI AELL  +    G+  IDQL +I    GT +P     ++  
Sbjct: 187 MLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE 246

Query: 241 YLPDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
           +   Y++   ++    L+ +F  A+  A+DLL KM   D   RI+A +AL H YFS    
Sbjct: 247 HARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306

Query: 300 PT-EPNKLP 307
           P  EP   P
Sbjct: 307 PEDEPEAEP 315

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score =  170 bits (432), Expect = 6e-50
 Identities = 111/313 (35%), Positives = 157/313 (50%), Gaps = 42/313 (13%)

Query: 20  LGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           +G GTYG VYKA   D K  +  A+K+I    +  G++ +A REI LL+ELK P++I L 
Sbjct: 9   VGRGTYGHVYKAKRKDGKDDRDYALKQI----EGTGISMSACREIALLRELKHPNVISLQ 64

Query: 78  DAFPHKGN--LHLVFEFMETDLETVIR--------NTNIFLSPADIKSYMQMTLKGLAFC 127
             F    +  + L+F++ E DL  +I+           + L    +KS +   L G+ + 
Sbjct: 65  KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 124

Query: 128 HKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAP 180
           H  WVLHRD+KP N+L+       G++K+AD G AR+F SP +        V   WYRAP
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQ-GSSDI--------DQLGKIFAAFGTA 231
           ELL GA+ Y   +D+WA GCIFAELL   P       DI        DQL +IF   G  
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 244

Query: 232 TPSQWPDLAYLP-------DYVEYQYVAAPPLRSLFP---SASDDALDLLSKMFTYDPKA 281
               W D+  +P       D+    Y     ++ +          A  LL K+ T DP  
Sbjct: 245 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIK 304

Query: 282 RITAQQALEHRYF 294
           RIT++QA++  YF
Sbjct: 305 RITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  169 bits (431), Expect = 6e-50
 Identities = 89/301 (29%), Positives = 139/301 (46%), Gaps = 62/301 (20%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   E +GEG  G VYKA D  TG+ VAIKK+RL KQ + +      EI ++K+ K P+I
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIIN---EILIMKDCKHPNI 77

Query: 74  IELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           ++  D++     L +V E+M+    TD   +I    + ++   I    +  L+GL + H 
Sbjct: 78  VDYYDSYLVGDELWVVMEYMDGGSLTD---IITQNFVRMNEPQIAYVCREVLQGLEYLHS 134

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           + V+HRD+K +N+L+   G +KLADFG A        +    V   ++ APE++   K Y
Sbjct: 135 QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKR-KDY 193

Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
           G  VD+W+ G +  E+       +G                            P Y+   
Sbjct: 194 GPKVDIWSLGIMCIEM------AEGE---------------------------PPYLRE- 219

Query: 250 YVAAPPLRSLF-------P------SASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
               PPLR+LF       P        S +  D L+K    DP+ R +A++ L+H +   
Sbjct: 220 ----PPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Query: 297 A 297
           A
Sbjct: 276 A 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score =  170 bits (432), Expect = 7e-50
 Identities = 112/313 (35%), Positives = 160/313 (51%), Gaps = 42/313 (13%)

Query: 20  LGEGTYGVVYKA--IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           +G GTYG VYKA   D K  +  A+K+I    +  G++ +A REI LL+ELK P++I L 
Sbjct: 9   VGRGTYGHVYKAKRKDGKDEKEYALKQI----EGTGISMSACREIALLRELKHPNVIALQ 64

Query: 78  DAFPHKGN--LHLVFEFMETDLETVIR--------NTNIFLSPADIKSYMQMTLKGLAFC 127
             F    +  + L+F++ E DL  +I+           + L  + +KS +   L G+ + 
Sbjct: 65  KVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124

Query: 128 HKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAP 180
           H  WVLHRD+KP N+L+       G++K+AD G AR+F SP +        V   WYRAP
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQ-GSSDI--------DQLGKIFAAFGTA 231
           ELL GA+ Y   +D+WA GCIFAELL   P       DI        DQL +IF+  G  
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFP 244

Query: 232 TPSQWPDLAYLPDYVEYQ-------YVAAPPLRSLFP---SASDDALDLLSKMFTYDPKA 281
               W D+  +P+Y   Q       Y  +  ++ +             LL K+ T DP  
Sbjct: 245 ADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTK 304

Query: 282 RITAQQALEHRYF 294
           RIT++QAL+  YF
Sbjct: 305 RITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  168 bits (427), Expect = 9e-50
 Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 32/282 (11%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           +   E +G+G +G VYKA   +TG+ VAIK I+L  +++      + EI++LK+ K P+I
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKI--INEIQILKKCKHPNI 59

Query: 74  IELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           ++   ++  K  L +V EF     L+ ++++TN  L+ + I    +  LKGL + H   +
Sbjct: 60  VKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI 119

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           +HRD+K  N+L+ S G++KL DFGL+    S  +     V   ++ APE++ G K Y   
Sbjct: 120 IHRDIKAANILLTSDGEVKLIDFGLSAQL-SDTKARNTMVGTPYWMAPEVING-KPYDYK 177

Query: 193 VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
            D+W+ G    EL   +P         +L  + A F  AT                    
Sbjct: 178 ADIWSLGITAIELAEGKP------PYSELPPMKALFKIAT------------------NG 213

Query: 253 APPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRY 293
            P LR+  P   SD+  D L K    +P+ R TA+Q L+H +
Sbjct: 214 PPGLRN--PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  162 bits (412), Expect = 1e-47
 Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 38/287 (13%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
            Y   +++G G +GVVYK ++ +TG  VAIK+I L K KE    + ++EI LLK LK P+
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I++ I +     +L+++ E+ E   L  +I+    F   + +  Y+   L+GLA+ H++ 
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPF-PESLVAVYVYQVLQGLAYLHEQG 119

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           V+HRD+K  N+L    G +KLADFG+A       +     V   ++ APE++       +
Sbjct: 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVI-----EMS 174

Query: 192 GV----DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           G     D+W+ GC   ELL   P      D++ +  +F       P        LP    
Sbjct: 175 GASTASDIWSLGCTVIELLTGNPPY---YDLNPMAALFRIVQDDHP-------PLP---- 220

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                           S +  D L + F  DP  R TA+Q L+H + 
Sbjct: 221 -------------EGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score =  157 bits (399), Expect = 1e-44
 Identities = 107/323 (33%), Positives = 158/323 (48%), Gaps = 25/323 (7%)

Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY + + +G G  G+V  A DT  G  VA+KK+    Q +     A RE+ L
Sbjct: 14  DSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVL 73

Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LK +   +II L++ F P K      +++LV E M+ +L  VI   ++ L    +   + 
Sbjct: 74  LKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLY 130

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR     +   T  V  R+YR
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ACTNFMMTPYVVTRYYR 189

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  EL+      QG+  IDQ  K+    GT +      
Sbjct: 190 APEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR 248

Query: 239 LA-----YLPDYVEYQYVAAPPLRS--LFPSASD-------DALDLLSKMFTYDPKARIT 284
           L      Y+ +  +Y  ++   L    +FPS S+        A DLLSKM   DP  RI+
Sbjct: 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRIS 308

Query: 285 AQQALEHRYFSSAPLPTEPNKLP 307
             +AL H Y +    P E    P
Sbjct: 309 VDEALRHPYITVWYDPAEAEAPP 331

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score =  157 bits (398), Expect = 9e-44
 Identities = 105/327 (32%), Positives = 170/327 (51%), Gaps = 29/327 (8%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           M + D+++     Y    ++G G++GVVY+AI   T + VAIKK+    Q +       R
Sbjct: 55  MIDNDINRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKN------R 108

Query: 61  EIKLLKELKSPHIIELIDAF------PHKGN--LHLVFEFMETDLETVIR---NTNIFLS 109
           E+ ++K L   +II L D +       ++ N  L++V EF+   +   ++     N  L 
Sbjct: 109 ELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALP 168

Query: 110 PADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRF 168
              +K Y     + LA+ H K++ HRD+KP NLLI  +   LKL DFG A+   +  R  
Sbjct: 169 LFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSV 228

Query: 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228
           ++ + +R+YRAPEL+ GA  Y   +D+W+ GCI AE++   P   G S +DQL +I    
Sbjct: 229 SY-ICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVL 287

Query: 229 GTATPSQWPDLAYLPDYVEYQY--VAAPPLRSLFPSAS-DDALDLLSKMFTYDPKARITA 285
           GT T  Q  ++   P+Y + ++  V    L+ +FP  + DDA++ +S+   Y+P  R+  
Sbjct: 288 GTPTEDQLKEMN--PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNP 345

Query: 286 QQALEHRYFSS-----APLPTEPNKLP 307
            +AL   +F         LP   +KLP
Sbjct: 346 IEALADPFFDDLRDPCIKLPKYIDKLP 372

Length = 440

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score =  149 bits (376), Expect = 2e-41
 Identities = 107/323 (33%), Positives = 158/323 (48%), Gaps = 25/323 (7%)

Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 10  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69

Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 70  MKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 126

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 185

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 186 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244

Query: 239 LA-----YLPDYVEYQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L      Y+ +  +Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304

Query: 285 AQQALEHRYFSSAPLPTEPNKLP 307
             +AL+H Y +    P E    P
Sbjct: 305 VDEALQHPYINVWYDPAEVEAPP 327

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score =  145 bits (368), Expect = 4e-40
 Identities = 107/330 (32%), Positives = 158/330 (47%), Gaps = 35/330 (10%)

Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76

Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251

Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310

Query: 284 TAQQALEHRYF--------SSAPLPTEPNK 305
           +  +AL+H Y         + AP P  P+K
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIPDK 340

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  141 bits (358), Expect = 2e-39
 Identities = 80/281 (28%), Positives = 131/281 (46%), Gaps = 40/281 (14%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           VLG+G+ GVVYK     TG+  A+KKI +   +E      LRE+K L+  +SP++++   
Sbjct: 8   VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRK-QLLRELKTLRSCESPYVVKCYG 66

Query: 79  AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-KKWVLHRD 136
           AF  +G + +V E+M+   L  +++          +    +  LKGL + H K+ ++HRD
Sbjct: 67  AFYKEGEISIVLEYMDGGSLADLLKKVGKI-PEPVLAYIARQILKGLDYLHTKRHIIHRD 125

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-----YRAPELLFGAKQYGA 191
           +KP+NLLI S G++K+ADFG++++  +     T      +     Y +PE + G + Y  
Sbjct: 126 IKPSNLLINSKGEVKIADFGISKVLEN-----TLDQCNTFVGTVTYMSPERIQG-ESYSY 179

Query: 192 GVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             D+W+ G    E    + PFL                    P   P    L   +    
Sbjct: 180 AADIWSLGLTLLECALGKFPFL--------------------PPGQPSFFELMQAI--CD 217

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
              P L +     S +  D +S     DPK R +A + L+H
Sbjct: 218 GPPPSLPA--EEFSPEFRDFISACLQKDPKKRPSAAELLQH 256

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  137 bits (348), Expect = 3e-38
 Identities = 83/284 (29%), Positives = 132/284 (46%), Gaps = 43/284 (15%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELKSPHIIELI 77
           LG+G++G V       TG+  A+K ++  K  +++ V  T L E  +L  +  P I++L 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHT-LTERNILSRINHPFIVKLH 59

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYM-QMTLKGLAFCHKKWVLHR 135
            AF  +  L+LV E+    +L + +     F S    + Y  ++ L  L + H   +++R
Sbjct: 60  YAFQTEEKLYLVLEYAPGGELFSHLSKEGRF-SEERARFYAAEIVL-ALEYLHSLGIIYR 117

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP N+L+ + G +KL DFGLA+   S   R         Y APE+L G K YG  VD 
Sbjct: 118 DLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLG-KGYGKAVDW 176

Query: 196 WAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           W+ G +  E+L  + PF   + D  ++                          Y+ +   
Sbjct: 177 WSLGVLLYEMLTGKPPFY--AEDRKEI--------------------------YEKILKD 208

Query: 255 PLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALE---HRYF 294
           PLR  FP   S +A DL+S +   DP  R+ +  A E   H +F
Sbjct: 209 PLR--FPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  135 bits (341), Expect = 4e-37
 Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 65/298 (21%)

Query: 23  GTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP 81
           G YG V+ A    TG   AIK I +    ++      L E  +L + +SP++++L  +F 
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ 63

Query: 82  HKGNLHLVFEFMET-DLETVIRNTNIFLSPADI-KSYMQMTLKGLAFCHKKWVLHRDMKP 139
            K NL+LV E++   DL +++ N        D+ + Y+   +  L + H   ++HRD+KP
Sbjct: 64  GKKNLYLVMEYLPGGDLASLLENVGSL--DEDVARIYIAEIVLALEYLHSNGIIHRDLKP 121

Query: 140 NNLLIGSHGQLKLADFGLA-------------------RIFGSPDRRFTHQVFARWYRAP 180
           +N+LI S+G LKL DFGL+                   RI G+PD           Y AP
Sbjct: 122 DNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPD-----------YIAP 170

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++ G + +   VD W+ GCI  E L   P   G +  +    I          +WP+  
Sbjct: 171 EVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNI-----LNGKIEWPE-- 222

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE---HRYFS 295
                                  SD+A+DL+SK+   DP+ R+ A+   E   H +F 
Sbjct: 223 -------------------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  130 bits (328), Expect = 5e-35
 Identities = 86/306 (28%), Positives = 132/306 (43%), Gaps = 61/306 (19%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELK-SPHI 73
           +++GEG++  V  A + +T +  AIK   K +L K+K+ V +    E ++L  L   P I
Sbjct: 7   KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKK-VKY-VKIEKEVLTRLNGHPGI 64

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I+L   F  + NL+ V E+    +L   IR     L     + Y    L  L + H K +
Sbjct: 65  IKLYYTFQDEENLYFVLEYAPNGELLQYIR-KYGSLDEKCTRFYAAEILLALEYLHSKGI 123

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--------------------RRFTHQV 172
           +HRD+KP N+L+     +K+ DFG A++                         RRF   V
Sbjct: 124 IHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFV 183

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT 232
               Y +PELL   K  G   D+WA GCI  ++L  +P  +GS++     KI        
Sbjct: 184 GTAEYVSPELL-NEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL----- 237

Query: 233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE-- 290
                         EY +   PP    FP    DA DL+ K+   DP+ R+   +  +  
Sbjct: 238 --------------EYSF---PP---NFP---PDAKDLIEKLLVLDPQDRLGVNEGYDEL 274

Query: 291 --HRYF 294
             H +F
Sbjct: 275 KAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score =  129 bits (325), Expect = 8e-35
 Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 69/308 (22%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL---------GKQKEGVNFTALR-EI 62
           +++K E++G+GTYG VY A++  TG+ +A+K++ L          +QK+ V   ALR EI
Sbjct: 2   KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVK--ALRSEI 59

Query: 63  KLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD----LETV--------IRNTNIFLSP 110
           + LK+L   +I++           +L FE  E      LE V        +R    F   
Sbjct: 60  ETLKDLDHLNIVQ-----------YLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRF-EE 107

Query: 111 ADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR----IFGSPDR 166
             ++ + +  L+GLA+ H K +LHRD+K +NLL+ + G  K++DFG+++    I+ + D+
Sbjct: 108 QLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDN-DQ 166

Query: 167 RFTHQVFARWYRAPELLFGAKQ-YGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKI 224
             + Q    W  APE++    Q Y A VD+W+ GC+  E+   RRP+    SD + +  +
Sbjct: 167 NMSMQGSVFWM-APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPW----SDEEAIAAM 221

Query: 225 FAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRS-LFPSASDDALDLLSKMFTYDPKARI 283
           F      +                    APP+   +  + S  ALD L+  FT +P  R 
Sbjct: 222 FKLGNKRS--------------------APPIPPDVSMNLSPVALDFLNACFTINPDNRP 261

Query: 284 TAQQALEH 291
           TA++ L+H
Sbjct: 262 TARELLQH 269

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  125 bits (316), Expect = 1e-33
 Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 42/291 (14%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           R+ +   +G GT+G VY A++  TG+ +A+K+IR+             E+K+L+ LK P+
Sbjct: 1   RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPN 60

Query: 73  IIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           +++      H+  +++   FME      LE ++ +  I L    I+ Y    L+GLA+ H
Sbjct: 61  LVKYYGVEVHREKVYI---FMEYCSGGTLEELLEHGRI-LDEHVIRVYTLQLLEGLAYLH 116

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-----YRAPELL 183
              ++HRD+KP N+ +  +G +KL DFG A    +       +          Y APE++
Sbjct: 117 SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-GEEVQSLAGTPAYMAPEVI 175

Query: 184 FGAKQ--YGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
            G K   +G   D+W+ GC+  E+   +RP+    S++D   +I    G       PD  
Sbjct: 176 TGGKGKGHGRAADIWSLGCVVLEMATGKRPW----SELDNEFQIMFHVGAGHKPPIPDSL 231

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
            L                     S +  D L +    DPK R TA + L+H
Sbjct: 232 QL---------------------SPEGKDFLDRCLESDPKKRPTASELLQH 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  125 bits (316), Expect = 2e-33
 Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 43/289 (14%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E +G+G++G V K      G+ +  K+I  G   E      + E+ +L+ELK P+I+   
Sbjct: 6   ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65

Query: 78  DAFPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPAD----IKSYMQMTLKGLAFCHKK 130
           D    + N  L++V E+ E  DL  +I+         +     +   Q+ L  L  CH +
Sbjct: 66  DRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLL-ALYECHNR 124

Query: 131 W-----VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ-VFARWYRAPELLF 184
                 VLHRD+KP N+ + ++  +KL DFGLA+I G  D  F    V   +Y +PE L 
Sbjct: 125 SDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH-DSSFAKTYVGTPYYMSPEQLN 183

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
               Y    D+W+ GC+  EL    P     + +    KI          + P       
Sbjct: 184 HMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI----KEGKFRRIP------- 231

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
              Y+Y             S +  +++  M   DP  R + ++ L+   
Sbjct: 232 ---YRY-------------SSELNEVIKSMLNVDPDKRPSTEELLQLPL 264

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  125 bits (315), Expect = 2e-33
 Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 69/297 (23%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E LGEG+YG VYKAI  +TGQ VAIK + +    E      ++EI +LK+  SP+I++  
Sbjct: 9   EKLGEGSYGSVYKAIHKETGQVVAIKVVPV----EEDLQEIIKEISILKQCDSPYIVKYY 64

Query: 78  DAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            ++    +L +V E+      +D+   ++ TN  L+  +I + +  TLKGL + H    +
Sbjct: 65  GSYFKNTDLWIVMEYCGAGSVSDI---MKITNKTLTEEEIAAILYQTLKGLEYLHSNKKI 121

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLA-----------RIFGSPDRRFTHQVFARWYRAPEL 182
           HRD+K  N+L+   GQ KLADFG++            + G+P           ++ APE+
Sbjct: 122 HRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTP-----------FWMAPEV 170

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA-----AFGTATPSQWP 237
           +     Y    D+W+ G    E+   +P     SDI  +  IF          + P +W 
Sbjct: 171 IQEIG-YNNKADIWSLGITAIEMAEGKPPY---SDIHPMRAIFMIPNKPPPTLSDPEKW- 225

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                                     S +  D + K    DP+ R +A Q L+H + 
Sbjct: 226 --------------------------SPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  122 bits (307), Expect = 3e-32
 Identities = 80/289 (27%), Positives = 125/289 (43%), Gaps = 54/289 (18%)

Query: 23  GTYGVVYKAIDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           G +G VY A    TG   AIK ++   +  + +  N  A R I ++ + +SP++ +L  +
Sbjct: 7   GAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAI-MMIQGESPYVAKLYYS 65

Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F  K  L+LV E++   D  ++I+     L     K Y+   + G+   H++ ++HRD+K
Sbjct: 66  FQSKDYLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK 124

Query: 139 PNNLLIGSHGQLKLADFGLAR-------IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           P NLLI   G LKL DFGL+R         G+PD           Y APE + G      
Sbjct: 125 PENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD-----------YLAPETILGVGDDKM 173

Query: 192 GVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             D W+ GC+  E L    PF   + D      +F     +    WP+            
Sbjct: 174 S-DWWSLGCVIFEFLFGYPPFHAETPD-----AVFDNI-LSRRINWPEEV---------- 216

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE---HRYFSS 296
                        S +A+DL++++   DP  R+ A    E   H +F S
Sbjct: 217 ---------KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  122 bits (307), Expect = 4e-32
 Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 34/284 (11%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G +G VYKA   +TG   A K I++  ++E  +F  + EI +L E K P+I+ L +A
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDF--MVEIDILSECKHPNIVGLYEA 70

Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           + ++  L ++ EF +   L++++      L+   I+   +  L+ L F H   V+HRD+K
Sbjct: 71  YFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLK 130

Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL----FGAKQYGAGVD 194
             N+L+   G +KLADFG++    S  ++    +   ++ APE++    F    Y    D
Sbjct: 131 AGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKAD 190

Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           +W+ G    EL    P                          P     P  V  + + + 
Sbjct: 191 IWSLGITLIELAQMEP--------------------------PHHELNPMRVLLKILKSE 224

Query: 255 PLRSLFPSA-SDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
           P     PS  S    D L      DP  R TA + L+H + S  
Sbjct: 225 PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score =  121 bits (305), Expect = 5e-32
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 17/203 (8%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRL-----GKQKEGVNFTALREIKLLKELKSPHII 74
           +G+G + VVYKAI    G+ VA+KK+++      K ++      L+EI LLK+L  P++I
Sbjct: 10  IGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQ----DCLKEIDLLKQLDHPNVI 65

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNT----NIFLSPADIKSYMQMTLKGLAFCHK 129
           + + +F     L++V E  +  DL  +I++      +       K ++Q+    L   H 
Sbjct: 66  KYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC-SALEHMHS 124

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           K ++HRD+KP N+ I + G +KL D GL R F S        V   +Y +PE +     Y
Sbjct: 125 KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG-Y 183

Query: 190 GAGVDVWAAGCIFAELLN-RRPF 211
               D+W+ GC+  E+   + PF
Sbjct: 184 NFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  120 bits (303), Expect = 8e-32
 Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 44/289 (15%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL---GKQKEGVNFTALREIKLLKELK 69
           R+ K E+LG G++G VY+ ++   G   A+K++ L   G+  +       +EI LL +L+
Sbjct: 1   RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            P+I++ +     + NL++  E +    L  +++    F  P  I+ Y +  L GL + H
Sbjct: 61  HPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPV-IRLYTRQILLGLEYLH 119

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR------WYRAPEL 182
            +  +HRD+K  N+L+ ++G +KLADFG+A       ++     FA+      ++ APE+
Sbjct: 120 DRNTVHRDIKGANILVDTNGVVKLADFGMA-------KQVVEFSFAKSFKGSPYWMAPEV 172

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     YG   D+W+ GC   E+   +P     S ++ +  +F   G +      +L  +
Sbjct: 173 IAQQGGYGLAADIWSLGCTVLEMATGKP---PWSQLEGVAAVF-KIGRS-----KELPPI 223

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
           PD++                 SD+A D + K    DP  R TA + LEH
Sbjct: 224 PDHL-----------------SDEAKDFILKCLQRDPSLRPTAAELLEH 255

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  120 bits (302), Expect = 1e-31
 Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 18/208 (8%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           +     +G+G++GVV+K +     +  A+K+I L K        A+ E ++L +L S +I
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADI--KSYMQMTLKGLAFCHKK 130
           I   ++F  KG L++V E+ E  DL  +++       P D   + ++Q+ L GLA  H K
Sbjct: 62  IRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILL-GLAHLHSK 120

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR------WYRAPELLF 184
            +LHRD+K  NL + ++  +K+ D G+A++         +  FA       +Y +PEL  
Sbjct: 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS------DNTNFANTIVGTPYYLSPELC- 173

Query: 185 GAKQYGAGVDVWAAGCIFAEL-LNRRPF 211
             K Y    DVWA G +  E    + PF
Sbjct: 174 EDKPYNEKSDVWALGVVLYECCTGKHPF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  120 bits (302), Expect = 7e-31
 Identities = 84/292 (28%), Positives = 130/292 (44%), Gaps = 47/292 (16%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           +G+G YG V+ A    TG+ VA+K  K  L  +   V    L E  +L   KS  +++L+
Sbjct: 9   VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHV-LTERDILTTTKSEWLVKLL 67

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
            AF     L+L  E++   D  T++ N  + LS    + YM    + +   H+   +HRD
Sbjct: 68  YAFQDDEYLYLAMEYVPGGDFRTLLNNLGV-LSEDHARFYMAEMFEAVDALHELGYIHRD 126

Query: 137 MKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
           +KP N LI + G +KL DFGL++        + GSPD           Y APE+L G K 
Sbjct: 127 LKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPD-----------YMAPEVLRG-KG 174

Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
           Y   VD W+ GC+  E L   P   GS+  +    +           W +    P Y + 
Sbjct: 175 YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK---------YWKETLQRPVYDDP 225

Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-QQALEHRYFSSAPL 299
           ++           + SD+A DL++K+   DP  R  + +    H +F     
Sbjct: 226 RF-----------NLSDEAWDLITKLIN-DPSRRFGSLEDIKNHPFFKEVDW 265

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  118 bits (297), Expect = 9e-31
 Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 14/200 (7%)

Query: 18  EVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLKELKSPH 72
           + LGEG +G VYK        K    VA+K ++    ++ +  F  LRE +++++L  P+
Sbjct: 5   KKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEF--LREARIMRKLDHPN 62

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +++L+     +  L++V E+ME  DL + +R     LS +D+ S+     +G+ +   K 
Sbjct: 63  VVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKN 122

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAKQ 188
            +HRD+   N L+G +  +K++DFGL+R     D  +  +   +  RW  APE L    +
Sbjct: 123 FIHRDLAARNCLVGENLVVKISDFGLSR-DLYDDDYYRKRGGKLPIRWM-APESLK-EGK 179

Query: 189 YGAGVDVWAAGCIFAELLNR 208
           + +  DVW+ G +  E+   
Sbjct: 180 FTSKSDVWSFGVLLWEIFTL 199

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  115 bits (290), Expect = 7e-30
 Identities = 76/288 (26%), Positives = 125/288 (43%), Gaps = 38/288 (13%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELKSP 71
           +    V+G+G +G V       T +  A+K +   K  +K  V    L E ++L+EL  P
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVR-NVLNERRILQELNHP 60

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            ++ L  +F  + N++LV + +   DL   +     F S   +K ++   +  L + H K
Sbjct: 61  FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKF-SEEQVKFWICEIVLALEYLHSK 119

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            ++HRD+KP+N+L+   G + + DF +A    +PD   T       Y APE+L     Y 
Sbjct: 120 GIIHRDIKPDNILLDEQGHVHITDFNIATKV-TPDTLTTSTSGTPGYMAPEVLCRQG-YS 177

Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             VD W+ G    E L  +RP+   S  I     I A   TA                  
Sbjct: 178 VAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQ--IRAKQETADV---------------- 219

Query: 250 YVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARI--TAQQALEHRYF 294
                    L+P+  S +A+D ++K+   DP+ R+    +    H YF
Sbjct: 220 ---------LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  115 bits (291), Expect = 7e-30
 Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 57/300 (19%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + +   E +G+G++G VYKAID +T Q VAIK I L + ++ +     +EI+ L + +SP
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEI-EDIQQEIQFLSQCRSP 59

Query: 72  HIIELIDAFPHKGNLHLVFEFME----TDL-------ETVIRNTNIFLSPADIKSYMQMT 120
           +I +   +F     L ++ E+       DL       ET I         A I   ++  
Sbjct: 60  YITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYI---------AFI---LREV 107

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRA 179
           L GL + H++  +HRD+K  N+L+   G +KLADFG++ ++  +  +R T  V   ++ A
Sbjct: 108 LLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF-VGTPFWMA 166

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PE++  +  Y    D+W+ G    EL    P L   SD+  +  +F              
Sbjct: 167 PEVIKQSG-YDEKADIWSLGITAIELAKGEPPL---SDLHPMRVLFL------------- 209

Query: 240 AYLPDYVEYQYVAAPPL--RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
             +P          PP    + F   S    D +S     DPK R +A++ L+H++   A
Sbjct: 210 --IPK-------NNPPSLEGNKF---SKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  114 bits (289), Expect = 1e-29
 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 15/201 (7%)

Query: 18  EVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLKELKSPH 72
           + LGEG +G VYK             VA+K ++    ++ +  F  LRE +++++L  P+
Sbjct: 5   KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEF--LREARIMRKLDHPN 62

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKK 130
           I++L+     +  L +V E+M   DL   +R      LS +D+ S+     +G+ +   K
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK 122

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
             +HRD+   N L+G +  +K++DFGL+R     D  +  +   +  RW  APE L    
Sbjct: 123 NFIHRDLAARNCLVGENLVVKISDFGLSR-DLYDDDYYKVKGGKLPIRWM-APESLK-EG 179

Query: 188 QYGAGVDVWAAGCIFAELLNR 208
           ++ +  DVW+ G +  E+   
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTL 200

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score =  114 bits (288), Expect = 1e-29
 Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 37/292 (12%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL----GKQKEGVNFTALREIKLLKELK 69
           +LK + LG G +   Y+A D KTG  +A+K++        ++E V     +EI+L+  L 
Sbjct: 2   WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN 61

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            PHII ++ A     + +L  E+M    +  ++     F     I  Y +  L+GL++ H
Sbjct: 62  HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIIN-YTEQLLRGLSYLH 120

Query: 129 KKWVLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRR---FTHQVFAR-WYRAPELL 183
           +  ++HRD+K  NLLI S GQ L++ADFG A    +       F  Q+     + APE+L
Sbjct: 121 ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVL 180

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA-AFGTATPSQWPDLAYL 242
            G +QYG   DVW+ GC+  E+   +P        + L  IF  A  T  PS       +
Sbjct: 181 RG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPS-------I 232

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           P+++      +P LR           D+  +     P+ R  +++ L+H  F
Sbjct: 233 PEHL------SPGLR-----------DVTLRCLELQPEDRPPSRELLKHPVF 267

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score =  113 bits (285), Expect = 3e-29
 Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 51/299 (17%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL------GKQKEGVNFTAL-REIKLL 65
           +++K  ++G G++G VY  ++  +G+ +A+K++ L       K ++     AL REI LL
Sbjct: 1   KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALL 60

Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           KEL+  +I++ + +     +L++  E++       + N         ++++++  LKGL 
Sbjct: 61  KELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLN 120

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-------IFGSPDRRFTHQVFARWYR 178
           + H + ++HRD+K  N+L+ + G +K++DFG+++          +   R + Q    W  
Sbjct: 121 YLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWM- 179

Query: 179 APELLFGAKQ--YGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           APE++   KQ  Y    D+W+ GC+  E+L  + PF     D  QL  IF     A+P  
Sbjct: 180 APEVV---KQTSYTRKADIWSLGCLVVEMLTGKHPF----PDCTQLQAIFKIGENASPE- 231

Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                                    PS  S +A+D L K F  D   R TA + L+H +
Sbjct: 232 ------------------------IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  113 bits (286), Expect = 3e-29
 Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 43/290 (14%)

Query: 15  LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
                LG G  GVV K +   TG+ +A+K IRL    E +    LRE+ +L +  SP+I+
Sbjct: 4   EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLE-INEAIQKQILRELDILHKCNSPYIV 62

Query: 75  ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHKKW-V 132
               AF + G++ +  E+M+      I        P  I   + +  LKGL + H+K  +
Sbjct: 63  GFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI 122

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           +HRD+KP+N+L+ S GQ+KL DFG++ ++  S  + F   V    Y APE + G   Y  
Sbjct: 123 IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF---VGTSSYMAPERIQGND-YSV 178

Query: 192 GVDVWAAGCIFAEL-LNRRPFLQ----GSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
             D+W+ G    EL   R P+           + L  I                      
Sbjct: 179 KSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI---------------------- 216

Query: 247 EYQYVAAPPLRSLFPSA--SDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               V  PP R   PS   S D  D ++     DP+ R + ++ LEH + 
Sbjct: 217 ----VNEPPPR--LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  114 bits (287), Expect = 4e-29
 Identities = 66/201 (32%), Positives = 108/201 (53%), Gaps = 10/201 (4%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G VY AID  TGQ VAIK++ L +Q  KE +    + EI +++E K 
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELI----INEILVMRENKH 75

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D++     L +V E++    L  V+  T   +    I +  +  L+ L F H 
Sbjct: 76  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHS 133

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+K +N+L+G  G +KL DFG          + +  V   ++ APE++   K Y
Sbjct: 134 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-TRKAY 192

Query: 190 GAGVDVWAAGCIFAELLNRRP 210
           G  VD+W+ G +  E++   P
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEP 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  110 bits (278), Expect = 4e-28
 Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 17/193 (8%)

Query: 18  EVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPH 72
           + LGEG +G VYK         T   VA+K ++ G  ++E   F  L E  ++K+L  P+
Sbjct: 5   KKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEF--LEEASIMKKLSHPN 62

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I+ L+        L++V E+M   DL   +R     L+  D+        KG+ +   K 
Sbjct: 63  IVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKN 122

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQ----VFARWYRAPELLFGA 186
            +HRD+   N L+  +  +K++DFGL+R I+     R        +  +W  APE L   
Sbjct: 123 FVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPI--KWM-APESLKDG 179

Query: 187 KQYGAGVDVWAAG 199
           K + +  DVW+ G
Sbjct: 180 K-FTSKSDVWSFG 191

Length = 258

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score =  109 bits (274), Expect = 2e-27
 Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 12/202 (5%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G V+ AID  TGQ VAIK+I L KQ  KE +    + EI ++KELK+
Sbjct: 20  KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELI----INEILVMKELKN 75

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D+F     L +V E++    L  V+  T   +  A I +  +  L+ L F H 
Sbjct: 76  PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVV--TETCMDEAQIAAVCRECLQALEFLHA 133

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
             V+HRD+K +N+L+G  G +KL DFG  A+I     +R T  V   ++ APE++   K 
Sbjct: 134 NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVV-TRKA 191

Query: 189 YGAGVDVWAAGCIFAELLNRRP 210
           YG  VD+W+ G +  E++   P
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEP 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  108 bits (273), Expect = 2e-27
 Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 18/206 (8%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKELKS 70
           + Y   + +G GTYG VYKA D  TG+ VAIK I+L   + G +F  ++ EI +LKE + 
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKL---EPGDDFEIIQQEISMLKECRH 59

Query: 71  PHIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           P+I+    ++  +  L +V E+       D+  V R     LS   I    + TLKGLA+
Sbjct: 60  PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGP---LSELQIAYVCRETLKGLAY 116

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFG 185
            H+   +HRD+K  N+L+   G +KLADFG+ A++  +  +R +      W  APE+   
Sbjct: 117 LHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWM-APEVAAV 175

Query: 186 AKQ--YGAGVDVWAAG--CI-FAELL 206
            ++  Y    D+WA G   I  AEL 
Sbjct: 176 ERKGGYDGKCDIWALGITAIELAELQ 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  108 bits (273), Expect = 2e-27
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 27/220 (12%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIR-----LGKQKEGVNFTALREIKLLKELKSPHII 74
           LG G +G V         +T A+K ++        Q+E +      E ++L+E   P I+
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHI----FSEKEILEECNHPFIV 56

Query: 75  ELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           +L   F  K  ++++ E+    +L T++R+  +F      + Y+   +    + H + ++
Sbjct: 57  KLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLF-DEYTARFYIACVVLAFEYLHNRGII 115

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT-----HQVFARWYRAPELLFGAKQ 188
           +RD+KP NLL+ S+G +KL DFG A+   S  + +T            Y APE++   K 
Sbjct: 116 YRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE------YVAPEIILN-KG 168

Query: 189 YGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA 227
           Y   VD W+ G +  ELL  R PF  G  D D + +I+  
Sbjct: 169 YDFSVDYWSLGILLYELLTGRPPF--GEDDEDPM-EIYND 205

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  110 bits (277), Expect = 3e-27
 Identities = 84/320 (26%), Positives = 135/320 (42%), Gaps = 67/320 (20%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKEL 68
           D +   +V+G G +G V+   D  TGQ  A+K +R   + K+ +  +  A R+I  L + 
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDI--LADA 58

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADI-KSYMQMTLKGLAF 126
            SP I++L  +F  + +L+LV E+M   DL  ++   ++F  P +  + Y+   +  L  
Sbjct: 59  DSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVF--PEETARFYIAELVLALDS 116

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-------------QVF 173
            HK   +HRD+KP+N+LI + G +KLADFGL +       R  +              V 
Sbjct: 117 VHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVR 176

Query: 174 ARW----------------YRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSS 216
            R                 Y APE+L G   YG   D W+ G I  E+L    PF   + 
Sbjct: 177 RRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235

Query: 217 DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFT 276
                 KI           W +    P                    S +A+DL+ ++  
Sbjct: 236 QETYN-KI---------INWKESLRFPPDPPV---------------SPEAIDLICRLLC 270

Query: 277 YDPKARIT-AQQALEHRYFS 295
            DP+ R+   ++   H +F 
Sbjct: 271 -DPEDRLGSFEEIKSHPFFK 289

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  107 bits (270), Expect = 7e-27
 Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 44/296 (14%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A D  TG+ VA+KK+ L KQ+         E+ ++++ + P
Sbjct: 22  DNFVK---IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR--RELLFNEVVIMRDYQHP 76

Query: 72  HIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +I+E+  ++     L +V EF+E    TD+ T  R     ++   I +     LK L+F 
Sbjct: 77  NIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLAVLKALSFL 131

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS--PDRRFTHQVFARWYRAPELLFG 185
           H + V+HRD+K +++L+ S G++KL+DFG         P R+    V   ++ APE++  
Sbjct: 132 HAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK--SLVGTPYWMAPEVI-S 188

Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
              YG  VD+W+ G +  E+++  P       +  + +I             D   LP  
Sbjct: 189 RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI------------RDN--LPPK 234

Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
           ++  +  +P LRS            L +M   DP  R TA + L H + + A  P+
Sbjct: 235 LKNLHKVSPRLRS-----------FLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  107 bits (269), Expect = 7e-27
 Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 42/296 (14%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D Y   EV+G G   VVY AI     + VAIK+I L K +  V+    +E++ + +   P
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDE-LRKEVQAMSQCNHP 59

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIR--NTNIFLSPADIKSYMQMTLKGLAFCH 128
           ++++   +F     L LV  ++    L  +++       L  A I + ++  LKGL + H
Sbjct: 60  NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDR----RFTHQVFARWYRAPELL 183
               +HRD+K  N+L+G  G +K+ADFG+ A +    DR    R T  V    + APE++
Sbjct: 120 SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTF-VGTPCWMAPEVM 178

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                Y    D+W+ G    EL                     A G A  S++P +  L 
Sbjct: 179 EQVHGYDFKADIWSFGITAIEL---------------------ATGAAPYSKYPPMKVLM 217

Query: 244 DYVEYQYVAAPPLRSLFPSASDDAL-----DLLSKMFTYDPKARITAQQALEHRYF 294
             ++      PP  SL   A           ++S     DP  R TA++ L+H++F
Sbjct: 218 LTLQ----NDPP--SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  107 bits (269), Expect = 8e-27
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 20/199 (10%)

Query: 18  EVLGEGTYGVVYKA-IDTKTGQT--VAIKKIRLGKQKEGV-NFTALREIKLLKELKSPHI 73
           + LGEG +G VYK  +  K G+T  VA+K ++    +E   +F  L+E +++K+L  P++
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDF--LKEARVMKKLGHPNV 58

Query: 74  IELIDAFPHKGNLHLVFEFME-TDLETVIRNTNI--------FLSPADIKSYMQMTLKGL 124
           + L+     +  L+LV E+ME  DL   +R +           LS  D+ S+     KG+
Sbjct: 59  VRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM 118

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQ--VFARWYRAPE 181
            +   K  +HRD+   N L+G    +K++DFGL+R ++     R      +  RW  APE
Sbjct: 119 EYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWM-APE 177

Query: 182 LLFGAKQYGAGVDVWAAGC 200
            L     + +  DVW+ G 
Sbjct: 178 SLKD-GIFTSKSDVWSFGV 195

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score =  107 bits (270), Expect = 1e-26
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 14/202 (6%)

Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIE 75
           RE+ G G++G VY A D +T + VAIKK+   GKQ        ++E++ L++L+ P+ IE
Sbjct: 21  REI-GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIE 79

Query: 76  LIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
               +  +    LV E+     +D+  V +     L   +I +     L+GLA+ H    
Sbjct: 80  YKGCYLREHTAWLVMEYCLGSASDILEVHKKP---LQEVEIAAICHGALQGLAYLHSHER 136

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYG 190
           +HRD+K  N+L+   G +KLADFG A +  SP   F   V   ++ APE++      QY 
Sbjct: 137 IHRDIKAGNILLTEPGTVKLADFGSASLV-SPANSF---VGTPYWMAPEVILAMDEGQYD 192

Query: 191 AGVDVWAAGCIFAELLNRRPFL 212
             VDVW+ G    EL  R+P L
Sbjct: 193 GKVDVWSLGITCIELAERKPPL 214

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score =  105 bits (264), Expect = 3e-26
 Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 38/278 (13%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G+YG VYK       Q  A+K++ LG   +     A+ EI++L  +  P+II   +A
Sbjct: 8   LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEA 67

Query: 80  FPHKGNLHLVFEFME-TDLETVIRNTNIF--LSPADI--KSYMQMTLKGLAFCHKKWVLH 134
           F     L +V E+    DL   I        L P     + ++Q+ L+GL   H++ +LH
Sbjct: 68  FLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQL-LRGLQALHEQKILH 126

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-QVFARWYRAPELLFGAKQYGAGV 193
           RD+K  N+L+ ++  +K+ D G++++           Q+    Y APE+  G + Y    
Sbjct: 127 RDLKSANILLVANDLVKIGDLGISKVLKK---NMAKTQIGTPHYMAPEVWKG-RPYSYKS 182

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ GC+  E+                    A F  A P +   +  L    + Q    
Sbjct: 183 DIWSLGCLLYEM--------------------ATF--APPFEARSMQDL--RYKVQRGKY 218

Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
           PP+  ++   S D  + +  M    PK R    + L  
Sbjct: 219 PPIPPIY---SQDLQNFIRSMLQVKPKLRPNCDKILAS 253

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score =  105 bits (263), Expect = 3e-26
 Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 6/203 (2%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y K  V+G G +G+V+        + V IK+I + +  +     A  E ++LK L  P+
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60

Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           IIE  + F     L +V E+    T  E + +  N  L    I  +    L  L   H K
Sbjct: 61  IIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120

Query: 131 WVLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            +LHRD+K  N+L+  H   +K+ DFG+++I  S  + +T  V    Y +PEL  G K Y
Sbjct: 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT-VVGTPCYISPELCEG-KPY 178

Query: 190 GAGVDVWAAGCIFAELLN-RRPF 211
               D+WA GC+  EL + +R F
Sbjct: 179 NQKSDIWALGCVLYELASLKRAF 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score =  105 bits (262), Expect = 5e-26
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y    V+GEG++G         + Q  A+K+IRL K    V   + +E  LL ++K P+
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVE-DSRKEAVLLAKMKHPN 59

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCHK 129
           I+   ++F   G+L++V E+ +  DL   I+     L P D  ++ ++QM L G+   H+
Sbjct: 60  IVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCL-GVQHIHE 118

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           K VLHRD+K  N+ +  +G++KL DFG AR+  SP       V   +Y  PE ++    Y
Sbjct: 119 KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPE-IWENMPY 177

Query: 190 GAGVDVWAAGCIFAELLN-RRPFLQGS 215
               D+W+ GCI  EL   + PF   S
Sbjct: 178 NNKSDIWSLGCILYELCTLKHPFQANS 204

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score =  105 bits (263), Expect = 6e-26
 Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G VY A+D  TGQ VAI+++ L +Q  KE +    + EI +++E K+
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 76

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D++     L +V E++    L  V+  T   +    I +  +  L+ L F H 
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHS 134

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+K +N+L+G  G +KL DFG          + +  V   ++ APE++   K Y
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-TRKAY 193

Query: 190 GAGVDVWAAGCIFAELLNRRP 210
           G  VD+W+ G +  E++   P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score =  105 bits (262), Expect = 9e-26
 Identities = 70/202 (34%), Positives = 113/202 (55%), Gaps = 12/202 (5%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G VY AID  TGQ VAIK++ L +Q  KE +    + EI +++E K+
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELI----INEILVMRENKN 75

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D++     L +V E++    L  V+  T   +    I +  +  L+ L F H 
Sbjct: 76  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALDFLHS 133

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
             V+HRD+K +N+L+G  G +KL DFG  A+I     +R T  V   ++ APE++   K 
Sbjct: 134 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVV-TRKA 191

Query: 189 YGAGVDVWAAGCIFAELLNRRP 210
           YG  VD+W+ G +  E++   P
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEP 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score =  103 bits (259), Expect = 3e-25
 Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---S 70
           Y + E++G G YG VY+     TG+ VA+K I L    + V+    RE+ LL +L+    
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVS-DIQREVALLSQLRQSQP 61

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I +   ++     L ++ E+ E   + T+++   I  +   I   ++  L  L + HK
Sbjct: 62  PNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPI--AEKYISVIIREVLVALKYIHK 119

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+K  N+L+ + G +KL DFG+A +      + +  V   ++ APE++   K Y
Sbjct: 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYY 179

Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
               D+W+ G    E+    P     SD+D   +       + P +  D  Y     E+
Sbjct: 180 DTKADIWSLGITIYEMATGNPPY---SDVDAF-RAMMLIPKSKPPRLEDNGYSKLLREF 234

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score =  102 bits (255), Expect = 1e-24
 Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 7/196 (3%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIELID 78
           +G G++G VY A ++ T + VA+KK+   GKQ        ++E+K L++LK P+ IE   
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
            +  +    LV E+       ++      L   +I +     L+GLA+ H   ++HRD+K
Sbjct: 89  CYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIK 148

Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGVDVW 196
             N+L+   GQ+KLADFG A    SP   F   V   ++ APE++      QY   VDVW
Sbjct: 149 AGNILLTEPGQVKLADFGSASK-SSPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVW 204

Query: 197 AAGCIFAELLNRRPFL 212
           + G    EL  R+P L
Sbjct: 205 SLGITCIELAERKPPL 220

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score =  101 bits (254), Expect = 1e-24
 Identities = 86/285 (30%), Positives = 126/285 (44%), Gaps = 32/285 (11%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G  G V K     TG  +A K + +G  K  V    LRE++++ E +SP+I+    A
Sbjct: 13  LGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGA 71

Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW-VLHRDM 137
           F ++ N+ +  EFM+   L+ + +     +    +       ++GL + +    ++HRD+
Sbjct: 72  FLNENNICMCMEFMDCGSLDRIYKKGGP-IPVEILGKIAVAVVEGLTYLYNVHRIMHRDI 130

Query: 138 KPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           KP+N+L+ S GQ+KL DFG++  +  S    F   V    Y +PE + G K Y    DVW
Sbjct: 131 KPSNILVNSRGQIKLCDFGVSGELINSIADTF---VGTSTYMSPERIQGGK-YTVKSDVW 186

Query: 197 AAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           + G    EL L + PF   + D D         G   P    DL         Q V  PP
Sbjct: 187 SLGISIIELALGKFPFAFSNIDDD---------GQDDPMGILDLL-------QQIVQEPP 230

Query: 256 LR---SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
            R   S FP    D  D +      DP  R T QQ      F  A
Sbjct: 231 PRLPSSDFPE---DLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  100 bits (252), Expect = 2e-24
 Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 22/217 (10%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKEL 68
              +   EV+GEGTYG VYKA   KTGQ VAIK   I   +++E        E  +L++ 
Sbjct: 5   TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEE-----IKEEYNILRKY 59

Query: 69  KS-PHIIELIDAF---PHKGN---LHLVFEFME----TDLETVIRNTNIFLSPADIKSYM 117
            + P+I     AF      GN   L LV E       TDL   +R     L    I   +
Sbjct: 60  SNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYIL 119

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
           + TL+GLA+ H+  V+HRD+K  N+L+  + ++KL DFG++    S   R    +   ++
Sbjct: 120 RETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYW 179

Query: 178 RAPELLFGAKQ----YGAGVDVWAAGCIFAELLNRRP 210
            APE++   +Q    Y A  DVW+ G    EL + +P
Sbjct: 180 MAPEVIACDEQPDASYDARSDVWSLGITAIELADGKP 216

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score =  101 bits (253), Expect = 3e-24
 Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 11/235 (4%)

Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIE 75
           RE+ G G++G VY A D +T + VAIKK+   GKQ        ++E+K L+ +K P+ IE
Sbjct: 31  REI-GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIE 89

Query: 76  LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               +  +    LV E+       ++      L   +I +     L+GLA+ H   ++HR
Sbjct: 90  YKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 149

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGV 193
           D+K  N+L+   GQ+KLADFG A I  SP   F   V   ++ APE++      QY   V
Sbjct: 150 DIKAGNILLTEPGQVKLADFGSASI-ASPANSF---VGTPYWMAPEVILAMDEGQYDGKV 205

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFG-TATPSQWPDLAYLPDYVE 247
           DVW+ G    EL  R+P L   + +  L  I      T   ++W D  Y  ++V+
Sbjct: 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSD--YFRNFVD 258

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  100 bits (252), Expect = 3e-24
 Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 35/211 (16%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKK------IRLGKQKEGVNFTALREIKLL 65
           D +   + LG G++G V       +G+  A+K       ++L KQ E V      E ++L
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKL-KQVEHVL----NEKRIL 55

Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYM-QMTLKG 123
           + ++ P ++ L  +F    NL+LV E++   +L + +R +  F  P   + Y  Q+ L  
Sbjct: 56  QSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEP-VARFYAAQVVL-A 113

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFAR 175
           L + H   +++RD+KP NLL+ S G +K+ DFG A+        + G+P+          
Sbjct: 114 LEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPE---------- 163

Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            Y APE++   K YG  VD WA G +  E+L
Sbjct: 164 -YLAPEIILS-KGYGKAVDWWALGILIYEML 192

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score =   99 bits (249), Expect = 4e-24
 Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 5/197 (2%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y+K + +GEG++G        + G+   IK+I + K        + +E+ +L  +K P+
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN 60

Query: 73  IIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCHK 129
           I++  ++F   GNL++V ++ E  DL   I      L P D  +  ++Q+ L  L   H 
Sbjct: 61  IVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICL-ALKHVHD 119

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           + +LHRD+K  N+ +   G +KL DFG+AR+  S        +   +Y +PE+    + Y
Sbjct: 120 RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEIC-ENRPY 178

Query: 190 GAGVDVWAAGCIFAELL 206
               D+WA GC+  E+ 
Sbjct: 179 NNKSDIWALGCVLYEMC 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 99.4 bits (248), Expect = 5e-24
 Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 34/282 (12%)

Query: 13  RYLKREVLGEGTYG--VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
            Y+   VLG+G +G   +Y+   T+    V  K++ L +  E     AL EI +L  L+ 
Sbjct: 1   HYIPIRVLGKGAFGEATLYRR--TEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH 58

Query: 71  PHIIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+II   + F     L +  E+    T  + ++R          +  Y+   +  +++ H
Sbjct: 59  PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH 118

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
           K  +LHRD+K  N+ +   G +KL DFG+++I GS        V   +Y +PEL  G  +
Sbjct: 119 KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQG-VK 177

Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
           Y    D+WA GC+  ELL  +     ++ ++ + KI     T   S +            
Sbjct: 178 YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY------------ 225

Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                          S + + L+  +   DP+ R TA + L+
Sbjct: 226 ---------------SSELISLVHSLLQQDPEKRPTADEVLD 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 99.9 bits (249), Expect = 5e-24
 Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 45/287 (15%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ----KEGVNFTALR-EIKLLKELKSPHII 74
           LG+G +G VY   D  TG+ +A+K++         K+ VN  AL  EI+LLK L+   I+
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVN--ALECEIQLLKNLQHERIV 67

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           +          L +  E+M    ++  ++     L+    + Y +  L+G+ + H   ++
Sbjct: 68  QYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGA-LTETVTRKYTRQILEGVEYLHSNMIV 126

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLA------RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           HRD+K  N+L  S G +KL DFG +         G+  +  T      ++ +PE++ G +
Sbjct: 127 HRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTG---TPYWMSPEVISG-E 182

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
            YG   DVW+ GC   E+L  +P                         W +  +      
Sbjct: 183 GYGRKADVWSVGCTVVEMLTEKP------------------------PWAE--FEAMAAI 216

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           ++    P    L    S DA + L + F  + K R +A++ L H + 
Sbjct: 217 FKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 99.6 bits (248), Expect = 8e-24
 Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 13/200 (6%)

Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           +E+LG G  G VYKA    T + +A+K I L    E +    + E+++L +  SP+II  
Sbjct: 6   QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVE-LQKQIMSELEILYKCDSPYIIGF 64

Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT-LKGLAFCHKKWVLHR 135
             AF  +  + +  EFM+     V R       P  +   + +  +KGL +     +LHR
Sbjct: 65  YGAFFVENRISICTEFMDGGSLDVYRKI-----PEHVLGRIAVAVVKGLTYLWSLKILHR 119

Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N+L+ + GQ+KL DFG++  +  S  + +   V    Y APE + G +QYG   D
Sbjct: 120 DVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTY---VGTNAYMAPERISG-EQYGIHSD 175

Query: 195 VWAAGCIFAEL-LNRRPFLQ 213
           VW+ G  F EL L R P+ Q
Sbjct: 176 VWSLGISFMELALGRFPYPQ 195

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 99.4 bits (248), Expect = 1e-23
 Identities = 82/290 (28%), Positives = 122/290 (42%), Gaps = 50/290 (17%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI------RLGKQKEGVNFTALREIKLLKELKSPHI 73
           LGEG  G V K     TG   A+K I       L KQ        LRE+++ K  KSP+I
Sbjct: 9   LGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQ-------ILRELEINKSCKSPYI 61

Query: 74  IELIDAF--PHKGNLHLVFEFMET-DLETV---IRNTNIFLSPADIKSYMQMTLKGLAFC 127
           ++   AF      ++ +  E+ E   L+++   ++     +    +    +  LKGL++ 
Sbjct: 62  VKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG-SPDRRFTHQVFARWYRAPELLFGA 186
           H + ++HRD+KP+N+L+   GQ+KL DFG++     S    FT   F   Y APE + G 
Sbjct: 122 HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSF---YMAPERIQG- 177

Query: 187 KQYGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
           K Y    DVW+ G    E+  NR PF         LG I                   + 
Sbjct: 178 KPYSITSDVWSLGLTLLEVAQNRFPFPP--EGEPPLGPI-------------------EL 216

Query: 246 VEYQYVAAPPLRSLFPSA----SDDALDLLSKMFTYDPKARITAQQALEH 291
           + Y      P     P      S++  D + +    DP  R T    LEH
Sbjct: 217 LSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 97.7 bits (243), Expect = 2e-23
 Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 45/294 (15%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI------RLGKQKEGVNFTALRE-IKLLK 66
           + K EVLG+G YG VY  + T  GQ +A+K++       L  +KE   +  L+E + LLK
Sbjct: 2   WTKGEVLGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKE---YEKLQEEVDLLK 57

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
            LK  +I++ +        + +  EF+    + +++        P     Y +  L G+A
Sbjct: 58  SLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPV-FCKYTKQILDGVA 116

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR------WYRA 179
           + H   V+HRD+K NN+++  +G +KL DFG AR         TH    +      ++ A
Sbjct: 117 YLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA 176

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PE++     YG   D+W+ GC   E+   +P L   + +D+L  +F              
Sbjct: 177 PEVI-NESGYGRKSDIWSIGCTVFEMATGKPPL---ASMDRLAAMFYIGAHRGL------ 226

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                         P L   F   S  A+D ++   T D   R +A Q L H +
Sbjct: 227 -------------MPRLPDSF---SAAAIDFVTSCLTRDQHERPSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 98.6 bits (245), Expect = 3e-23
 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIE 75
           RE+ G G++G VY A D +  + VAIKK+   GKQ        ++E++ L++L+ P+ I+
Sbjct: 21  REI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79

Query: 76  LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               +  +    LV E+       ++      L   +I +     L+GLA+ H   ++HR
Sbjct: 80  YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGV 193
           D+K  N+L+   G +KL DFG A I  +P   F   V   ++ APE++      QY   V
Sbjct: 140 DVKAGNILLSEPGLVKLGDFGSASIM-APANXF---VGTPYWMAPEVILAMDEGQYDGKV 195

Query: 194 DVWAAGCIFAELLNRRPFL 212
           DVW+ G    EL  R+P L
Sbjct: 196 DVWSLGITCIELAERKPPL 214

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 98.0 bits (244), Expect = 3e-23
 Identities = 83/296 (28%), Positives = 129/296 (43%), Gaps = 50/296 (16%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D     + LG+G YG VYK +   TG T+A+K+IRL   +   N   + E+ +L +  SP
Sbjct: 1   DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFN-QIIMELDILHKAVSP 59

Query: 72  HIIELIDAFPHKGNLHLVFEFMET---------DLETVIRNTNIFLSPADIKSYMQMTLK 122
           +I++   AF  +G +++  E+M+           + T     ++      I   +   LK
Sbjct: 60  YIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVL---RRITYAVVKGLK 116

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPE 181
            L   H   ++HRD+KP N+L+  +GQ+KL DFG++  +  S  +     +  + Y APE
Sbjct: 117 FLKEEHN--IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT---NIGCQSYMAPE 171

Query: 182 LL-----FGAKQYGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
            +          Y    DVW+ G    E+ L R P+   +        IFA         
Sbjct: 172 RIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQ-------- 218

Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                 L   V+      PP  +L    SDDA D ++K     P  R T  Q LEH
Sbjct: 219 ------LSAIVD----GDPP--TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 98.0 bits (244), Expect = 9e-23
 Identities = 84/281 (29%), Positives = 127/281 (45%), Gaps = 39/281 (13%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G  G VYK I   TG+  A+K I  G  ++ V     REI++L+++  P++++  D 
Sbjct: 82  IGSGAGGTVYKVIHRPTGRLYALKVI-YGNHEDTVRRQICREIEILRDVNHPNVVKCHDM 140

Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F H G + ++ EFM+   LE        FL  AD+    +  L G+A+ H++ ++HRD+K
Sbjct: 141 FDHNGEIQVLLEFMDGGSLEGTHIADEQFL--ADVA---RQILSGIAYLHRRHIVHRDIK 195

Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE-----LLFGAKQYGAGV 193
           P+NLLI S   +K+ADFG++RI           V    Y +PE     L  GA    AG 
Sbjct: 196 PSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAG- 254

Query: 194 DVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
           D+W+ G    E  L R PF  G                       D A L   +      
Sbjct: 255 DIWSLGVSILEFYLGRFPFGVGRQG--------------------DWASLMCAICMSQPP 294

Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
             P      +AS +    +S     +P  R +A Q L+H +
Sbjct: 295 EAP-----ATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330

Length = 353

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 95.1 bits (236), Expect = 4e-22
 Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 38/285 (13%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G +G VYKA + +TG   A K I    ++E  ++  + EI++L     P+I++L+ A
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY--MVEIEILATCNHPYIVKLLGA 77

Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F   G L ++ EF     ++ ++   +  L+   I+   +  L+ L + H   ++HRD+K
Sbjct: 78  FYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLK 137

Query: 139 PNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ----YGAGV 193
             N+L+   G +KLADFG+ A+   +  RR +  +   ++ APE++         Y    
Sbjct: 138 AGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSF-IGTPYWMAPEVVMCETMKDTPYDYKA 196

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYV 251
           D+W+ G    E+    P     + +  L KI  +     + PS+W               
Sbjct: 197 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKW--------------- 241

Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                       S +  D L       P+ R +A Q LEH + SS
Sbjct: 242 ------------SMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 94.1 bits (234), Expect = 8e-22
 Identities = 84/303 (27%), Positives = 128/303 (42%), Gaps = 43/303 (14%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           LG+G +G V       TG+  A KK+   RL K+++G    AL E K+L+++ S  I+ L
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRL-KKRKGEQM-ALNEKKILEKVSSRFIVSL 58

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLH 134
             AF  K +L LV   M   DL+  I N        A    Y    + GL   H++ +++
Sbjct: 59  AYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVY 118

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ-VFARWYRAPELLFGAKQYGAGV 193
           RD+KP N+L+  HG ++++D GLA        +          Y APE+L G + Y   V
Sbjct: 119 RDLKPENVLLDDHGNVRISDLGLAVEL--KGGKKIKGRAGTPGYMAPEVLQG-EVYDFSV 175

Query: 194 DVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
           D +A GC   E++  R PF Q    +++              +      L   VEY    
Sbjct: 176 DWFALGCTLYEMIAGRSPFRQRKEKVEK--------------EELKRRTLEMAVEYPDKF 221

Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPT-EPNKL 306
           +P  +           DL   +   DP+ R+     +A +  EH  F        E   L
Sbjct: 222 SPEAK-----------DLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGML 270

Query: 307 PRP 309
             P
Sbjct: 271 EPP 273

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 93.7 bits (233), Expect = 2e-21
 Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 35/310 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV K +   +G  +A K I L + K  +    +RE+K+L E  SP
Sbjct: 1   DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHL-EIKPAIRNQIIRELKVLHECNSP 59

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P +I   + +  L+GL +  +
Sbjct: 60  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PENILGKISIAVLRGLTYLRE 117

Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 118 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 173

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLP-- 243
            Y    D+W+ G    E+   R +     D  +L  +F               ++  P  
Sbjct: 174 HYTVQSDIWSLGLSLVEMAIGR-YPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPD 232

Query: 244 -----------DYVEYQYVAAPPLRSLFPSA--SDDALDLLSKMFTYDPKARITAQQALE 290
                      DY+    V  PP +   PS   SD+  D + K    +PK R   ++  +
Sbjct: 233 SPRPMAIFELLDYI----VNEPPPK--LPSGAFSDEFQDFVDKCLKKNPKERADLKELTK 286

Query: 291 HRYFSSAPLP 300
           H +   A L 
Sbjct: 287 HPFIKRAELE 296

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 91.5 bits (227), Expect = 4e-21
 Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 40/290 (13%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKT--GQTVAI-KKIRLGKQKEGVNFTALREIKLLKELK 69
           RY+ ++ LG+G++G VY   D K    + + + K+I +G+        A +E +LL +L 
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD 60

Query: 70  SPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR----NTNIFLSPADIKSYMQMTLKGL 124
            P I++   +F  +    ++ E+ E  DL+  +                + ++Q+ L G+
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL-GV 119

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFARWYRAPELL 183
            + H++ +LHRD+K  N+ +  +  LK+ DFG++R + GS D   T      +Y +PE L
Sbjct: 120 HYMHQRRILHRDLKAKNIFL-KNNLLKIGDFGVSRLLMGSCDLATTF-TGTPYYMSPEAL 177

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
              + Y +  D+W+ GCI  E+       +G + +  + +I       TPS       LP
Sbjct: 178 -KHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG---PTPS-------LP 226

Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
           +    Q  +                 ++  M   DP  R +A + L + +
Sbjct: 227 ETYSRQLNS-----------------IMQSMLNKDPSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 91.6 bits (227), Expect = 4e-21
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 6/191 (3%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELID 78
           +G G +  VY+A      + VA+KK+++ +  +       ++EI LLK+L  P++I+ +D
Sbjct: 10  IGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLD 69

Query: 79  AFPHKGNLHLVFEFMET-DLETVI---RNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           +F     L++V E  +  DL  +I   +     +    +  Y       +   H + V+H
Sbjct: 70  SFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMH 129

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+KP N+ I + G +KL D GL R F S        V   +Y +PE +     Y    D
Sbjct: 130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH-ENGYNFKSD 188

Query: 195 VWAAGCIFAEL 205
           +W+ GC+  E+
Sbjct: 189 IWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 92.4 bits (229), Expect = 4e-21
 Identities = 76/295 (25%), Positives = 143/295 (48%), Gaps = 44/295 (14%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + Y+K   +GEG+ G+V  A +  +G+ VA+K + L KQ+         E+ ++++ +  
Sbjct: 24  ENYIK---IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHQ 78

Query: 72  HIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +++E+  ++     L ++ EF++    TD+ +  R     L+   I +  +  L+ L + 
Sbjct: 79  NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTR-----LNEEQIATVCESVLQALCYL 133

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGS-PDRRFTHQVFARWYRAPELLFG 185
           H + V+HRD+K +++L+   G++KL+DFG  A+I    P R+    V   ++ APE++  
Sbjct: 134 HSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL--VGTPYWMAPEVI-S 190

Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
              YG  VD+W+ G +  E+++  P                 + + +P Q   +  L D 
Sbjct: 191 RTPYGTEVDIWSLGIMVIEMVDGEP----------------PYFSDSPVQ--AMKRLRD- 231

Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                 + PP        S    D L +M T +P+ R TAQ+ L+H +     LP
Sbjct: 232 ------SPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLP 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 92.0 bits (228), Expect = 5e-21
 Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 40/294 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A    +G+ VA+KK+ L KQ+         E+ ++++ +  
Sbjct: 23  DNFIK---IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 77

Query: 72  HIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +++E+ +++     L +V EF+E    TD+ T  R     ++   I +     LK L+  
Sbjct: 78  NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLKALSVL 132

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H + V+HRD+K +++L+   G++KL+DFG          R    V   ++ APEL+    
Sbjct: 133 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELI-SRL 191

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
            YG  VD+W+ G +  E+++  P       +  +  I                 LP  ++
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPKLK 237

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             +  +P L+             L ++   DP  R TA + L+H + + A  P+
Sbjct: 238 NLHKVSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPS 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 91.6 bits (227), Expect = 5e-21
 Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 36/283 (12%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G +G VYKA + +TG   A K I    ++E  ++  + EI +L     P+I++L+DA
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDA 70

Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F ++ NL ++ EF     ++ V+      L+   I+   + TL+ L + H+  ++HRD+K
Sbjct: 71  FYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLK 130

Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF----GAKQYGAGVD 194
             N+L    G +KLADFG++       +R    +   ++ APE++       + Y    D
Sbjct: 131 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 190

Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYVA 252
           VW+ G    E+    P     + +  L KI  +     A PS+W                
Sbjct: 191 VWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---------------- 234

Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                      S +  D L K    +  AR T  Q L+H + +
Sbjct: 235 -----------SSEFKDFLKKCLEKNVDARWTTTQLLQHPFVT 266

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 91.2 bits (226), Expect = 6e-21
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 7/204 (3%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           RY   + +GEG++G +Y A      +   IK+I L K        + +E+ LL ++K P+
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 73  IIELIDAFPHKGNLHLVFEFME-TDLETVI-RNTNIFLSPADIKS-YMQMTLKGLAFCHK 129
           I+    +F   G L +V E+ +  DL   I R   +  S   I S ++Q++L GL   H 
Sbjct: 61  IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISL-GLKHIHD 119

Query: 130 KWVLHRDMKPNNLLIGSHGQL-KLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
           + +LHRD+K  N+ +  +G + KL DFG+AR            V   +Y +PE+    + 
Sbjct: 120 RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEIC-QNRP 178

Query: 189 YGAGVDVWAAGCIFAELLN-RRPF 211
           Y    D+W+ GC+  EL   + PF
Sbjct: 179 YNNKTDIWSLGCVLYELCTLKHPF 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 91.0 bits (226), Expect = 1e-20
 Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 33/206 (16%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKK------IRLGKQKEGVNFTALREIKLLKELKSPHI 73
           +G GT+G V+   D  +    A+K       IRL KQ++ V+     E ++LKE+  P I
Sbjct: 9   VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRL-KQEQHVH----NEKRVLKEVSHPFI 63

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L      +  L+++ E++   +L + +RN+  F S +    Y    +  L + H K +
Sbjct: 64  IRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRF-SNSTGLFYASEIVCALEYLHSKEI 122

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYRAPELLF 184
           ++RD+KP N+L+   G +KL DFG A+        + G+P+           Y APE++ 
Sbjct: 123 VYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPE-----------YLAPEVI- 170

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRP 210
            +K +   VD WA G +  E+L   P
Sbjct: 171 QSKGHNKAVDWWALGILIYEMLVGYP 196

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 90.1 bits (223), Expect = 2e-20
 Identities = 75/294 (25%), Positives = 139/294 (47%), Gaps = 40/294 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A +  TG+ VA+KK+ L KQ+         E+ ++++    
Sbjct: 25  DSFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--RELLFNEVVIMRDYHHE 79

Query: 72  HIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +++++ +++     L +V EF+E    TD+ T  R     ++   I +     L+ L++ 
Sbjct: 80  NVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLSVLRALSYL 134

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H + V+HRD+K +++L+ S G++KL+DFG          +    V   ++ APE++    
Sbjct: 135 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVI-SRL 193

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
            YG  VD+W+ G +  E+++  P       +  + +I                 LP  V+
Sbjct: 194 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN--------------LPPRVK 239

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             +  +  LR          LDL   M   +P  R TAQ+ L+H +   A  P+
Sbjct: 240 DSHKVSSVLRGF--------LDL---MLVREPSQRATAQELLQHPFLKLAGPPS 282

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 90.3 bits (224), Expect = 3e-20
 Identities = 97/364 (26%), Positives = 143/364 (39%), Gaps = 73/364 (20%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKEL 68
             +  + ++G G +G V    +  TG   A+K ++   L  Q+    F   R+I  L   
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDI--LSIS 58

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
            SP I +L  AF  K NL+LV E+    DL +++            + Y+   +  +   
Sbjct: 59  NSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSV 118

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFG-LARI-----------FGSPDRRFTHQVFAR 175
           H+   +HRD+KP N+LI   G +KLADFG  AR+            G+PD          
Sbjct: 119 HQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPD---------- 168

Query: 176 WYRAPELL-----FGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFG 229
            Y APE+L      G   YG   D W+ G I  E++  R PF +G+S       I     
Sbjct: 169 -YIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-AKTYNNI----- 221

Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSL-FPS---ASDDALDLLSKMFTYDPKARITA 285
                           + +Q       R L FP     S D LDL+  +     K R+  
Sbjct: 222 ----------------MNFQ-------RFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGY 257

Query: 286 QQALEHRYFSSAPLPTEPNKLPR--PATKRASKASDFNPQEGPTVLSPPRKTRRVMPDRE 343
           +    H +FS        N LP   P  K     S+F+  E  +       T ++ P   
Sbjct: 258 EGLCCHPFFSKIDWNNIRNSLPPFVPTLKSDDDTSNFDEPEKNSTRRSQSSTTQLKP--N 315

Query: 344 GFEG 347
           GF G
Sbjct: 316 GFSG 319

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 89.1 bits (221), Expect = 3e-20
 Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 23/208 (11%)

Query: 16  KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           +R VLG+GTYG+VY A D  T   +AIK+I     +         EI L   LK  +I++
Sbjct: 12  ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPL--HEEIALHSYLKHRNIVQ 69

Query: 76  LIDAFPHKGNLHLVFEFMET----DLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHK 129
            + +    G   +   FME      L  ++R+    +  +   I  Y +  L+GL + H 
Sbjct: 70  YLGSDSENGFFKI---FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126

Query: 130 KWVLHRDMKPNNLLIGSH-GQLKLADFG----LARIFGSP-DRRFTHQVFARWYRAPELL 183
             ++HRD+K +N+L+ ++ G +K++DFG    LA I  +P    FT  +    Y APE++
Sbjct: 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI--NPCTETFTGTL---QYMAPEVI 181

Query: 184 -FGAKQYGAGVDVWAAGCIFAELLNRRP 210
             G + YGA  D+W+ GC   E+   +P
Sbjct: 182 DKGPRGYGAPADIWSLGCTIVEMATGKP 209

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 88.6 bits (219), Expect = 5e-20
 Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 31/278 (11%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKELKSPHIIELID 78
           +G GTYG VYKA +  TG+  AIK I+L   + G +F  ++ EI ++K+ K  +I+    
Sbjct: 17  IGSGTYGDVYKARNVNTGELAAIKVIKL---EPGEDFAVVQQEIIMMKDCKHSNIVAYFG 73

Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           ++  +  L +  EF        I +    LS + I    + TL+GL + H K  +HRD+K
Sbjct: 74  SYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIK 133

Query: 139 PNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ--YGAGVDV 195
             N+L+  +G +KLADFG+ A+I  +  +R +  +   ++ APE+    ++  Y    D+
Sbjct: 134 GANILLTDNGHVKLADFGVSAQITATIAKRKSF-IGTPYWMAPEVAAVERKGGYNQLCDI 192

Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           WA G    EL   +P +    D+  +  +F    T +  Q P L    D +++       
Sbjct: 193 WAVGITAIELAELQPPM---FDLHPMRALF--LMTKSNFQPPKLK---DKMKW------- 237

Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                   S+     +    T +PK R TA++ L+H +
Sbjct: 238 --------SNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 88.6 bits (219), Expect = 5e-20
 Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 8/195 (4%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKELKSPHIIELID 78
           +G GTYG VYKA +  TG+  A+K I+L   + G +F+ ++ EI ++KE K  +I+    
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKL---EPGDDFSLIQQEIFMVKECKHCNIVAYFG 73

Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           ++  +  L +  E+        I +    LS   I    + TL+GLA+ H K  +HRD+K
Sbjct: 74  SYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIK 133

Query: 139 PNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ--YGAGVDV 195
             N+L+  +G +KLADFG+ A+I  +  +R +  +   ++ APE+    K   Y    D+
Sbjct: 134 GANILLTDNGDVKLADFGVAAKITATIAKRKSF-IGTPYWMAPEVAAVEKNGGYNQLCDI 192

Query: 196 WAAGCIFAELLNRRP 210
           WA G    EL   +P
Sbjct: 193 WAVGITAIELAELQP 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 88.4 bits (219), Expect = 6e-20
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 14  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 70

Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 71  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 130

Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 131 AARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 187

Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 188 VWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 89.1 bits (221), Expect = 6e-20
 Identities = 86/297 (28%), Positives = 131/297 (44%), Gaps = 57/297 (19%)

Query: 23  GTYGVVYKAIDTKTGQTVAIKKIR-----LGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           G YG VY     +T Q  A+KKI      L  Q + V     R+I    E  +P ++ + 
Sbjct: 12  GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQV--FVERDILTFAE--NPFVVSMF 67

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADI-KSYMQMTLKGLAFCHKKWVLHR 135
            +F  K +L +V E++E  D  T+++N      P D+ + Y   T+  L + H   ++HR
Sbjct: 68  CSFETKRHLCMVMEYVEGGDCATLLKNIGAL--PVDMARMYFAETVLALEYLHNYGIVHR 125

Query: 136 DMKPNNLLIGSHGQLKLADFGLARI-------------FGSPDRRFT-HQVFAR-WYRAP 180
           D+KP+NLLI S G +KL DFGL++I                  R F   QV     Y AP
Sbjct: 126 DLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP 185

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++   + YG  VD WA G I  E L       G +  +  G++      +   +WP+  
Sbjct: 186 EVIL-RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI-----SDDIEWPEGD 239

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI---TAQQALEHRYF 294
                       A P          DA DL+S++   +P  R+    A +  +HR+F
Sbjct: 240 -----------EALP---------ADAQDLISRLLRQNPLERLGTGGAFEVKQHRFF 276

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 88.2 bits (218), Expect = 8e-20
 Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 30/280 (10%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K E +G+G++G V+K ID +T Q VAIK I L + ++ +     +EI +L +  SP++
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYV 64

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            +   ++     L ++ E++       +     F     I + ++  LKGL + H +  +
Sbjct: 65  TKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPF-DEFQIATMLKEILKGLDYLHSEKKI 123

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+   G +KLADFG+A        +    V   ++ APE++     Y +  
Sbjct: 124 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYDSKA 182

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ G    EL    P    +SD+  +  +F                +P          
Sbjct: 183 DIWSLGITAIELAKGEP---PNSDMHPMRVLF---------------LIPKN------NP 218

Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
           P L   F   S    + +      DP  R TA++ L+H++
Sbjct: 219 PTLTGEF---SKPFKEFIDACLNKDPSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 87.8 bits (218), Expect = 2e-19
 Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 72/357 (20%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLG--KQKEGVNFTALREIKLLKEL--KSPHII 74
           VLG+G++G V  A    T +  A+K ++     Q + V  T + E ++L  L  K P + 
Sbjct: 2   VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECT-MTEKRVL-ALAGKHPFLT 59

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           +L   F  K  L  V E++   DL   I+ +  F  P       ++ L GL F H++ ++
Sbjct: 60  QLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVL-GLQFLHERGII 118

Query: 134 HRDMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWYRAPEL 182
           +RD+K +N+L+ S G +K+ADFG+             F G+PD           Y APE+
Sbjct: 119 YRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPD-----------YIAPEI 167

Query: 183 LFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L     YG  VD WA G +  E+L  + PF     + D   ++F +              
Sbjct: 168 LSYQP-YGPAVDWWALGVLLYEMLAGQSPF-----EGDDEDELFQSI------------- 208

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSS 296
           L D V Y        R L    S +A  +L    T +P+ R+       Q    H +F  
Sbjct: 209 LEDEVRYP-------RWL----SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257

Query: 297 ---APLPTEPNKLP-RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGFEG 347
                L  +  K P +P  K     S+F+ +  +   VL+PP +      D+E F G
Sbjct: 258 IDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEKPVLTPPDEAIIRNIDQEEFRG 314

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 87.1 bits (216), Expect = 2e-19
 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 16/214 (7%)

Query: 12  DRYLKR-EVLGEGTYGVVYKA----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
            R+LK  + LGEG +G V       +   TG+ VA+K +     +E       REI++L+
Sbjct: 3   KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNH-SGEEQHRSDFEREIEILR 61

Query: 67  ELKSPHIIEL--IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L   +I++   +   P   +L L+ E++ +  L   ++     ++   +  +     KG
Sbjct: 62  TLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKG 121

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRA 179
           + +   +  +HRD+   N+L+ S   +K++DFGLA++       +      +    WY A
Sbjct: 122 MDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-A 180

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFL 212
           PE L  +K   A  DVW+ G    EL     P  
Sbjct: 181 PECLRTSKFSSAS-DVWSFGVTLYELFTYGDPSQ 213

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 87.0 bits (215), Expect = 2e-19
 Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 30/280 (10%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K E +G+G++G VYK ID +T + VAIK I L + ++ +     +EI +L +  SP+I
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYI 64

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
                ++     L ++ E++       +      L    I + ++  LKGL + H +  +
Sbjct: 65  TRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERKI 123

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+   G +KLADFG+A        +    V   ++ APE++     Y    
Sbjct: 124 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDFKA 182

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ G    EL    P    +SD+  +  +F     + P+           +E QY  +
Sbjct: 183 DIWSLGITAIELAKGEP---PNSDLHPMRVLFLIPKNSPPT-----------LEGQY--S 226

Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
            P +           + +      DP+ R TA++ L+H++
Sbjct: 227 KPFK-----------EFVEACLNKDPRFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 87.5 bits (217), Expect = 3e-19
 Identities = 99/352 (28%), Positives = 151/352 (42%), Gaps = 66/352 (18%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G++G V  A    T +  AIK  K  +  + + V  T +    L    + P +  L
Sbjct: 2   VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHL 61

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F  K +L  V E++   DL   I+++  F   A  + Y    + GL F HKK +++R
Sbjct: 62  FCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRF-DEARARFYAAEIICGLQFLHKKGIIYR 120

Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELLF 184
           D+K +N+L+   G +K+ADFG+ +             G+PD           Y APE+L 
Sbjct: 121 DLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPD-----------YIAPEILK 169

Query: 185 GAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
           G K Y   VD W+ G +  E+L  + PF     D D+L   F +     P       + P
Sbjct: 170 GQK-YNESVDWWSFGVLLYEMLIGQSPF--HGEDEDEL---FDSILNDRP-------HFP 216

Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-TAQQALEHRYFSSAPLPT- 301
            ++                 S +A D LSK+F  DP  R+       +H +F        
Sbjct: 217 RWI-----------------SKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERL 259

Query: 302 EPNKLP---RPATKRASKASDFNPQ---EGPTVLSPPRKTRRVMPDREGFEG 347
           E  ++P   +P  K  S AS+F+ +   E    LSP  K      D+E F G
Sbjct: 260 EKREIPPPFKPKVKSPSDASNFDREFTNEKVR-LSPVDKKLLASMDQEQFRG 310

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 86.4 bits (214), Expect = 3e-19
 Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 19/209 (9%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKI-------RLGKQKEGVNFTAL-REIKLLKE- 67
           E LG G +G VYK      GQ  +A+K+I          K++   +   +  E+ ++KE 
Sbjct: 6   EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ 65

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFME-----TDLETVIRNTNIFLSPADIKSYMQMTLK 122
           L+ P+I+     F     L++V + +E         ++      F        ++QM L 
Sbjct: 66  LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVL- 124

Query: 123 GLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            L + HK K ++HRD+ PNN+++G   ++ + DFGLA+    P+ + T  V    Y  PE
Sbjct: 125 ALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQ-KQPESKLTSVVGTILYSCPE 183

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           ++   + YG   DVWA GCI  ++   +P
Sbjct: 184 IVKN-EPYGEKADVWAFGCILYQMCTLQP 211

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 86.3 bits (213), Expect = 3e-19
 Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K E +G+G++G V+K ID +T + VAIK I L + ++ +     +EI +L +  SP++
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYV 64

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            +   ++     L ++ E++       +      L    I + ++  LKGL + H +  +
Sbjct: 65  TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 123

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+  HG++KLADFG+A        +    V   ++ APE++     Y +  
Sbjct: 124 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKA 182

Query: 194 DVWAAGCIFAELLNRRP 210
           D+W+ G    EL    P
Sbjct: 183 DIWSLGITAIELAKGEP 199

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 85.8 bits (212), Expect = 5e-19
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELID 78
           +G G +  VY+A     G  VA+KK+++    +       ++EI LLK+L  P++I+   
Sbjct: 10  IGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 69

Query: 79  AFPHKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           +F     L++V E  +  DL  +I++       +    +  Y       L   H + V+H
Sbjct: 70  SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMH 129

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+KP N+ I + G +KL D GL R F S        V   +Y +PE +     Y    D
Sbjct: 130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH-ENGYNFKSD 188

Query: 195 VWAAGCIFAEL 205
           +W+ GC+  E+
Sbjct: 189 IWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 84.3 bits (208), Expect = 1e-18
 Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 44/288 (15%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN--FTALR-EIKLLKELKSPHII 74
           ++LG+G +G VY   D  TG+ +A+K+++   +    +    AL  EI+LLK L    I+
Sbjct: 8   KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIV 67

Query: 75  ELIDAF--PHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +       P +  L +  E M    ++  +++    L+    + Y +  L+G+++ H   
Sbjct: 68  QYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGA-LTENVTRKYTRQILEGVSYLHSNM 126

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLAR------IFGSPDRRFTHQVFARWYRAPELLFG 185
           ++HRD+K  N+L  S G +KL DFG ++      + G+  +  T      ++ +PE++ G
Sbjct: 127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTG---TPYWMSPEVISG 183

Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
            + YG   D+W+ GC   E+L  +P     ++ + +  IF      T    P        
Sbjct: 184 -EGYGRKADIWSVGCTVVEMLTEKP---PWAEFEAMAAIFKIATQPTNPVLP-------- 231

Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                          P  SD   D L ++F  + K R +A + L H +
Sbjct: 232 ---------------PHVSDHCRDFLKRIFV-EAKLRPSADELLRHTF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 84.4 bits (209), Expect = 2e-18
 Identities = 79/297 (26%), Positives = 124/297 (41%), Gaps = 53/297 (17%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-------S 70
           E LG G YGVV K     TG  +A+K+IR       VN    +  +LL +L         
Sbjct: 7   EELGRGAYGVVDKMRHVPTGTIMAVKRIRAT-----VNSQEQK--RLLMDLDISMRSVDC 59

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNT---NIFLSPADIKSYMQMTL-KGLAF 126
           P+ +    A   +G++ +  E M+T L+   +      + + P DI   + +++ K L +
Sbjct: 60  PYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTI-PEDILGKIAVSIVKALEY 118

Query: 127 CHKKW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLF 184
            H K  V+HRD+KP+N+LI  +GQ+KL DFG++  +  S  +  T     + Y APE + 
Sbjct: 119 LHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK--TIDAGCKPYMAPERIN 176

Query: 185 G---AKQYGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
                K Y    DVW+ G    EL   R P+    +   QL                   
Sbjct: 177 PELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK------------------ 218

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
                   Q V  P  +      S +  D ++K    + K R    + L+H +F   
Sbjct: 219 --------QVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 84.7 bits (209), Expect = 2e-18
 Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 14/212 (6%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G  GVV K     +G  +A K I L + K  +    +RE+++L E  SP+I+    A
Sbjct: 13  LGAGNGGVVTKVQHKPSGLIMARKLIHL-EIKPAIRNQIIRELQVLHECNSPYIVGFYGA 71

Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT-LKGLAFCHKK-WVLHRD 136
           F   G + +  E M+   L+ V++       P +I   + +  L+GLA+  +K  ++HRD
Sbjct: 72  FYSDGEISICMEHMDGGSLDQVLKEAKRI--PEEILGKVSIAVLRGLAYLREKHQIMHRD 129

Query: 137 MKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           +KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G   Y    D+
Sbjct: 130 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT-HYSVQSDI 185

Query: 196 WAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFA 226
           W+ G    EL + R P      D  +L  IF 
Sbjct: 186 WSMGLSLVELAIGRYPI--PPPDAKELEAIFG 215

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 84.7 bits (209), Expect = 3e-18
 Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 35/313 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 5   DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 63

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT-LKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 64  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 121

Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 122 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 177

Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQW---------- 236
            Y    D+W+ G    E+ + R P      D  +L  +F       P++           
Sbjct: 178 HYSVQSDIWSMGLSLVEMAIGRYPI--PPPDAKELELMFGCPVEGDPAESETSPRPRPPG 235

Query: 237 -PDLAYLPD-------YVEYQYVAAPPLRSLFPSA--SDDALDLLSKMFTYDPKARITAQ 286
            P  +Y PD       +    Y+   P   L PS     +  D ++K    +P  R   +
Sbjct: 236 RPLSSYGPDSRPPMAIFELLDYIVNEPPPKL-PSGVFGAEFQDFVNKCLIKNPAERADLK 294

Query: 287 QALEHRYFSSAPL 299
           Q + H +   +  
Sbjct: 295 QLMVHAFIKRSEA 307

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 83.6 bits (206), Expect = 3e-18
 Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 44/288 (15%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN--FTALR-EIKLLKELKSPHII 74
           ++LG+G +G VY   D  TG+ +A K+++   +    +   +AL  EI+LLK L+   I+
Sbjct: 8   KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIV 67

Query: 75  ELIDAFPHKG--NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           +       +    L +  E+M              L+ +  + Y +  L+G+++ H   +
Sbjct: 68  QYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMI 127

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLAR------IFGSPDRRFTHQVFARWYRAPELLFGA 186
           +HRD+K  N+L  S G +KL DFG ++      + G+  R  T      ++ +PE++ G 
Sbjct: 128 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTG---TPYWMSPEVISG- 183

Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           + YG   DVW+ GC   E+L  +P     ++ + +  IF                     
Sbjct: 184 EGYGRKADVWSLGCTVVEMLTEKP---PWAEYEAMAAIFK-------------------- 220

Query: 247 EYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRY 293
               +A  P     PS  S+ A D L  +F  + + R +A++ L H +
Sbjct: 221 ----IATQPTNPQLPSHISEHARDFLGCIFV-EARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 84.5 bits (209), Expect = 3e-18
 Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 20/206 (9%)

Query: 17  REVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGK----QKEGVNFTALREIKLLKELK 69
            +VLG+G YG V+   K     TG+  A+K ++       QK+  +  A R I  L+ +K
Sbjct: 1   LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNI--LEAVK 58

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKS-YMQMTLKGLAFC 127
            P I++LI AF   G L+L+ E++   +L   +    IF+   D    Y+      L   
Sbjct: 59  HPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFME--DTACFYLSEISLALEHL 116

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
           H++ +++RD+KP N+L+ + G +KL DFGL +     G+    F   +    Y APE+L 
Sbjct: 117 HQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTI---EYMAPEILM 173

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRP 210
            +  +G  VD W+ G +  ++L   P
Sbjct: 174 RSG-HGKAVDWWSLGALMYDMLTGAP 198

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 83.2 bits (205), Expect = 4e-18
 Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 42/285 (14%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRL--GKQKEGVNFTALR-EIKLLKELKSPHII 74
           ++LG G +G VY   D  TG+ +A+K++      Q+      AL  EI+LLK L+   I+
Sbjct: 8   KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIV 67

Query: 75  ELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           +       P +  L +  E+M              L+    + Y +  L+G+++ H   +
Sbjct: 68  QYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMI 127

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLAR------IFGSPDRRFTHQVFARWYRAPELLFGA 186
           +HRD+K  N+L  S G +KL DFG ++      + G+  +  T      ++ +PE++ G 
Sbjct: 128 VHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTG---TPYWMSPEVISG- 183

Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           + YG   DVW+  C   E+L  +P     ++ + +  IF      T    PD        
Sbjct: 184 EGYGRKADVWSVACTVVEMLTEKP---PWAEYEAMAAIFKIATQPTKPMLPD-------- 232

Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                            SD   D L ++F  + K R TA+  L H
Sbjct: 233 ---------------GVSDACRDFLKQIF-VEEKRRPTAEFLLRH 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 84.1 bits (208), Expect = 5e-18
 Identities = 81/294 (27%), Positives = 122/294 (41%), Gaps = 52/294 (17%)

Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSP 71
            E LG G++G V  A    TG+  AIK     +I   KQ + V     +E  +L EL  P
Sbjct: 23  GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHV----AQEKSILMELSHP 78

Query: 72  HIIELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADI-KSYMQMTLKGLAFCHK 129
            I+ ++ +F  +  ++ + EF +  +L T +R    F  P D+ K Y    +    + H 
Sbjct: 79  FIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRF--PNDVAKFYHAELVLAFEYLHS 136

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           K +++RD+KP NLL+ + G +K+ DFG A+    PDR FT       Y APE++  +K +
Sbjct: 137 KDIIYRDLKPENLLLDNKGHVKVTDFGFAK--KVPDRTFT-LCGTPEYLAPEVI-QSKGH 192

Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
           G  VD W  G +  E +   P     +      KI A                       
Sbjct: 193 GKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG---------------------- 230

Query: 250 YVAAPPLRSLFPSASDD-ALDLLSKMFTYDPKARITA-----QQALEHRYFSSA 297
                  R  FP+  D  A DL+  +   D   R+            H YF  A
Sbjct: 231 -------RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277

Length = 329

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 83.1 bits (205), Expect = 5e-18
 Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           LG+G +G V       TG+  A KK+   RL K+K G    AL E ++L+++ SP I+ L
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRL-KKKSGEKM-ALLEKEILEKVNSPFIVNL 58

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             AF  K +L LV   M   DL+  I N     L    +  Y      G+   H   +++
Sbjct: 59  AYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVY 118

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RDMKP N+L+   G  +L+D GLA +     +  T +     Y APE+L   + Y   VD
Sbjct: 119 RDMKPENVLLDDQGNCRLSDLGLA-VELKDGKTITQRAGTNGYMAPEILK-EEPYSYPVD 176

Query: 195 VWAAGC-IFAELLNRRPF 211
            +A GC I+  +  R PF
Sbjct: 177 WFAMGCSIYEMVAGRTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 82.4 bits (204), Expect = 7e-18
 Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 14/204 (6%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V +      G+    VAIK ++ G   K+ ++F  L E  ++ +   P+I
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDF--LTEASIMGQFDHPNI 67

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + ++ E+ME   L+  +R  +   +   +   ++    G+ +  +   
Sbjct: 68  IRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY 127

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAKQY 189
           +HRD+   N+L+ S+   K++DFGL+R     +  +T +   +  RW  APE +   +++
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRW-TAPEAI-AYRKF 185

Query: 190 GAGVDVWAAGCIFAELLN--RRPF 211
            +  DVW+ G +  E+++   RP+
Sbjct: 186 TSASDVWSFGIVMWEVMSYGERPY 209

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 82.0 bits (203), Expect = 1e-17
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 31/221 (14%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-------KSPH 72
           +G G +G V K +   +G  +A+K+IR              + +LL +L         P+
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRS-------TVDEKEQKRLLMDLDVVMRSSDCPY 64

Query: 73  IIELIDAFPHKGNLHLVFEFMETDLETV------IRNTNIFLSPADIKSYMQM-TLKGLA 125
           I++   A   +G+  +  E M+  L+        +  + I   P +I   + + T+K L 
Sbjct: 65  IVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVI---PEEILGKIAVATVKALN 121

Query: 126 FCHKKW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELL 183
           +  ++  ++HRD+KP+N+L+  +G +KL DFG++ ++  S  +  T     R Y APE +
Sbjct: 122 YLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK--TRDAGCRPYMAPERI 179

Query: 184 --FGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQL 221
                  Y    DVW+ G    E+   + P+ + +S  DQL
Sbjct: 180 DPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQL 220

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 83.1 bits (205), Expect = 2e-17
 Identities = 83/315 (26%), Positives = 130/315 (41%), Gaps = 52/315 (16%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E    G  G  +  ID KT + V IK      Q+ G       E  +L+ +  P II+L 
Sbjct: 98  ETFTPGAEGFAFACIDNKTCEHVVIK----AGQRGG----TATEAHILRAINHPSIIQLK 149

Query: 78  DAFPHKGNLHLVFEFMETDLETVI---RNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             F +     L+    +TDL   +   RN  I     DI +  +  L+ + + H+  ++H
Sbjct: 150 GTFTYNKFTCLILPRYKTDLYCYLAAKRNIAI----CDILAIERSVLRAIQYLHENRIIH 205

Query: 135 RDMKPNNLLIGSHGQLKLADFGLA---------RIFGSPDRRFTHQVFARWYRAPELLFG 185
           RD+K  N+ I   G + L DFG A         + +G      T+        APELL  
Sbjct: 206 RDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATN--------APELL-A 256

Query: 186 AKQYGAGVDVWAAGCIFAEL------LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
              YG  VD+W+AG +  E+      L  +  L G  D D+  K+        P+++P  
Sbjct: 257 RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316

Query: 240 AYLPDYVEYQYVAA-------PPLRSLFPSASDDALD---LLSKMFTYDPKARITAQQAL 289
           A     ++  Y+         P  R L+ +  +  +D   L+ KM  +D   R +A+  L
Sbjct: 317 A--QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374

Query: 290 EHRYFSSAPLPTEPN 304
           +   F   P P  PN
Sbjct: 375 DFAAFQDIPDPY-PN 388

Length = 391

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 81.2 bits (200), Expect = 4e-17
 Identities = 83/326 (25%), Positives = 144/326 (44%), Gaps = 62/326 (19%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIE 75
           ++LG+G++G V+ A    T Q  AIK ++  +    + V  T + +  L    + P +  
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L   F  K NL  V E++   DL   I++ + F  P     Y    + GL F H K +++
Sbjct: 61  LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRA-TFYAAEIICGLQFLHSKGIVY 119

Query: 135 RDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELL 183
           RD+K +N+L+ + G +K+ADFG+ +             G+PD           Y APE+L
Sbjct: 120 RDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPD-----------YIAPEIL 168

Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
            G K Y   VD W+ G +  E+L  + PF       D+  ++F +     P         
Sbjct: 169 LGQK-YNTSVDWWSFGVLLYEMLIGQSPF----HGHDE-EELFQSIRMDNP-------CY 215

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL-EHRYFSS---AP 298
           P ++                   +A D+L K+F  +P+ R+  +  + +H +F     + 
Sbjct: 216 PRWLTR-----------------EAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSA 258

Query: 299 LPTEPNKLP-RPATKRASKASDFNPQ 323
           L     + P +P  K A+  S+F+ +
Sbjct: 259 LEEREIEPPFKPKVKSANDCSNFDKE 284

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 81.0 bits (200), Expect = 5e-17
 Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 53/294 (18%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           ++LG+GT+G V    +  TG+  A+K  K  +   K+ V  T L E ++L+  + P +  
Sbjct: 1   KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHT-LTESRVLQNTRHPFLTA 59

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L  +F     L  V E+    +L   +    +F S    + Y    +  L + H   V++
Sbjct: 60  LKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALGYLHSCDVVY 118

Query: 135 RDMKPNNLLIGSHGQLKLADFGLAR---IFGSPDRRF--THQVFARWYRAPELLFGAKQY 189
           RD+K  NL++   G +K+ DFGL +     G+  + F  T +     Y APE+L     Y
Sbjct: 119 RDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE-----YLAPEVL-EDNDY 172

Query: 190 GAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
           G  VD W  G +  E++  R PF   + D ++L                          +
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKL--------------------------F 204

Query: 249 QYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
           + +    +R  FP   S +A  LL+ +   DPK R+      A++ +EHR+F+S
Sbjct: 205 ELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 79.3 bits (195), Expect = 7e-17
 Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 6/196 (3%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y    V+G+G+YG V        G+   IKK+ L          A +E +LL +LK P+I
Sbjct: 2   YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI 61

Query: 74  IELIDAFP-HKGNLHLVFEFMET-DLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCHK 129
           +   +++    G L++V  F E  DL   ++     L P +  ++ ++Q+ +  L + H+
Sbjct: 62  VAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAM-ALQYLHE 120

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           K +LHRD+K  N+ +     +K+ D G+AR+  +     +  +   +Y +PE LF  K Y
Sbjct: 121 KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPE-LFSNKPY 179

Query: 190 GAGVDVWAAGCIFAEL 205
               DVWA GC   E+
Sbjct: 180 NYKSDVWALGCCVYEM 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 80.1 bits (198), Expect = 8e-17
 Identities = 70/237 (29%), Positives = 116/237 (48%), Gaps = 15/237 (6%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELKSPHIIELID 78
           +G GT G VYK    KTG  +A+K++R    KE  N   L ++  +LK    P+I++   
Sbjct: 23  IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVKCYG 81

Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHKKW-VLHRD 136
            F    ++ +  E M T L+ +++     + P DI   M +  +K L +  +K  V+HRD
Sbjct: 82  YFITDSDVFICMELMSTCLDKLLKRIQGPI-PEDILGKMTVAIVKALHYLKEKHGVIHRD 140

Query: 137 MKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELL---FGAKQYGAG 192
           +KP+N+L+ + G +KL DFG++ R+  S  +  T       Y APE +       +Y   
Sbjct: 141 VKPSNILLDASGNVKLCDFGISGRLVDSKAK--TRSAGCAAYMAPERIDPPDPNPKYDIR 198

Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
            DVW+ G    EL   + P+    ++ + L KI        PS  P+  + PD+  +
Sbjct: 199 ADVWSLGISLVELATGQFPYKNCKTEFEVLTKI---LQEEPPSLPPNEGFSPDFCSF 252

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 79.7 bits (196), Expect = 8e-17
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 11/202 (5%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           ++G G +G VY      TG+  A+K     +I++ KQ E +       + L+     P I
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 59

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + +  AF     L  + + M   DL   +    +F S  +++ Y    + GL   H ++V
Sbjct: 60  VCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVF-SEKEMRFYATEIILGLEHMHNRFV 118

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           ++RD+KP N+L+  HG ++++D GLA  F    ++    V    Y APE+L     Y + 
Sbjct: 119 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGTAYDSS 176

Query: 193 VDVWAAGCIFAELL-NRRPFLQ 213
            D ++ GC+  +LL    PF Q
Sbjct: 177 ADWFSLGCMLFKLLRGHSPFRQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 80.2 bits (198), Expect = 9e-17
 Identities = 96/358 (26%), Positives = 150/358 (41%), Gaps = 74/358 (20%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G++G V  A    T +  AIK  K  +  Q + V  T + +  L    K P + +L
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQL 66

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+ V E++   DL   I+    F  P  +  Y      GL F H K +++R
Sbjct: 67  HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAV-FYAAEIAIGLFFLHSKGIIYR 125

Query: 136 DMKPNNLLIGSHGQLKLADFGLAR--IF---------GSPDRRFTHQVFARWYRAPELLF 184
           D+K +N+++ + G +K+ADFG+ +  IF         G+PD           Y APE++ 
Sbjct: 126 DLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPD-----------YIAPEII- 173

Query: 185 GAKQ-YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
            A Q YG  VD WA G +  E+L  +P   G  D D+L   F +      S         
Sbjct: 174 -AYQPYGKSVDWWAFGVLLYEMLAGQPPFDG-EDEDEL---FQSIMEHNVS--------- 219

Query: 244 DYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI----TAQQAL-EHRYFSS- 296
                           +P S S +A+ +   + T  P  R+    T ++ + EH +F   
Sbjct: 220 ----------------YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263

Query: 297 -----APLPTEPNKLPRPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGFEG 347
                     +P   P+   +R   A +F+      P VL+PP K      D+  F+G
Sbjct: 264 DWEKLERREIQPPFKPKVKGRR--SAENFDKFFTREPPVLTPPDKLVIANIDQSEFQG 319

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 80.0 bits (197), Expect = 1e-16
 Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 43/313 (13%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIE 75
           +VLG+G++G V  A     G+  A+K ++  +    + V  T + +  L    ++P +  
Sbjct: 1   KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH 60

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVL 133
           L   F  K +L  V EF+   DL   I++   F L  A    Y    + GL F H K ++
Sbjct: 61  LYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATF--YAAEIVCGLQFLHSKGII 118

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           +RD+K +N+++   G +K+ADFG+ +  +FG  D R +       Y APE+L G K Y  
Sbjct: 119 YRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNRASTFCGTPDYIAPEILQGLK-YTF 175

Query: 192 GVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
            VD W+ G +  E+L  + PF     D D+L   F +    TP       + P ++    
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPF--HGDDEDEL---FESIRVDTP-------HYPRWI---- 219

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE-HRYFSSAPLPT-EPNKLPR 308
                        + ++ D+L K+F  DP  R+     +  H +F +      E  +L  
Sbjct: 220 -------------TKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTALEKRELDP 266

Query: 309 PATKRASKASDFN 321
           P   +    SD++
Sbjct: 267 PFKPKVKSPSDYS 279

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 28/217 (12%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G++G V  A    T +  AIK ++  +  Q + V  T + +  L  + K P + +L
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQL 66

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+ V E++   DL   I+    F  P  +    ++++ GL F H++ +++R
Sbjct: 67  HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISV-GLFFLHRRGIIYR 125

Query: 136 DMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWYRAPELLF 184
           D+K +N+++ S G +K+ADFG+           R F G+PD           Y APE++ 
Sbjct: 126 DLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPD-----------YIAPEII- 173

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221
             + YG  VD WA G +  E+L  +P   G  D D+L
Sbjct: 174 AYQPYGKSVDWWAYGVLLYEMLAGQPPFDG-EDEDEL 209

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 79.5 bits (196), Expect = 6e-16
 Identities = 76/273 (27%), Positives = 111/273 (40%), Gaps = 45/273 (16%)

Query: 36  TGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKELKSPHIIELID---AFPHKGNLHLVFE 91
           TG  VAIK +R    +E        RE  L   L  P+I+ L+D   A P  G L  VFE
Sbjct: 2   TGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPP--GLLFAVFE 59

Query: 92  FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-- 148
           ++    L  V+      L   +    M   L  LA  H + ++HRD+KP N+++   G  
Sbjct: 60  YVPGRTLREVLAADGA-LPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVR 118

Query: 149 -QLKLADFGLARI---FGSPDR----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGC 200
              K+ DFG+  +       D     R T  +    Y APE L G +      D++A G 
Sbjct: 119 PHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRG-EPVTPNSDLYAWGL 177

Query: 201 IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLF 260
           IF E L  +  +QG+S  + L +  +          P    LP      ++A  PL    
Sbjct: 178 IFLECLTGQRVVQGASVAEILYQQLS----------PVDVSLP-----PWIAGHPLG--- 219

Query: 261 PSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                    +L K    DP+ R  +  AL  R+
Sbjct: 220 --------QVLRKALNKDPRQRAASAPALAERF 244

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 77.3 bits (190), Expect = 7e-16
 Identities = 88/320 (27%), Positives = 130/320 (40%), Gaps = 53/320 (16%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELKSPHIIELI 77
           +G+G++G V +     T +  A+K IR      +  V  T L E  +L ++  P I+ L 
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHT-LAERTVLAQVNCPFIVPLK 59

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
            +F     L+LV  F+   +L   ++    F   +  + Y    L  L   HK  V++RD
Sbjct: 60  FSFQSPEKLYLVLAFINGGELFHHLQREGRF-DLSRARFYTAELLCALENLHKFNVIYRD 118

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +KP N+L+   G + L DFGL ++    D +         Y APELL G   Y   VD W
Sbjct: 119 LKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLG-HGYTKAVDWW 177

Query: 197 AAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-----YQYV 251
             G +  E+L   P                                P Y E     Y+ +
Sbjct: 178 TLGVLLYEMLTGLP--------------------------------PFYDENVNEMYRKI 205

Query: 252 AAPPLRSLFPSASD-DALDLLSKMFTYDPKARI---TAQQALEHRYFSSAPLPTEPNK-- 305
              PLR  FP   D DA DLL  + + DP  R+    AQ+   H +FS         K  
Sbjct: 206 LQEPLR--FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKLLMKGI 263

Query: 306 LP--RPATKRASKASDFNPQ 323
            P  +PA   A   S+F+ +
Sbjct: 264 QPPFKPAVSSAIDTSNFDEE 283

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 76.1 bits (187), Expect = 1e-15
 Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 25/204 (12%)

Query: 20  LGEGTYGVVYKA---IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           +G G +G+V+        K    VAIK IR G   E  +F  + E +++ +L  P +++L
Sbjct: 12  IGSGQFGLVWLGYWLEKRK----VAIKTIREGAMSEE-DF--IEEAQVMMKLSHPKLVQL 64

Query: 77  IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKWV 132
                 +  + LVFEFME   L   +R      S    ++ + M L   +G+A+     V
Sbjct: 65  YGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQ---ETLLGMCLDVCEGMAYLESSNV 121

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV---FARWYRAPELLFGAKQY 189
           +HRD+   N L+G +  +K++DFG+ R     D ++T      F   + +PE +F   +Y
Sbjct: 122 IHRDLAARNCLVGENQVVKVSDFGMTRFV--LDDQYTSSTGTKFPVKWSSPE-VFSFSKY 178

Query: 190 GAGVDVWAAGCIFAELLN--RRPF 211
            +  DVW+ G +  E+ +  + P+
Sbjct: 179 SSKSDVWSFGVLMWEVFSEGKTPY 202

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 77.3 bits (190), Expect = 1e-15
 Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 42/292 (14%)

Query: 18  EVLGEGTYGVVY---KAIDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKELKSP 71
           +VLG G YG V+   K     TG+  A+K ++   L ++ + V  T      L    +SP
Sbjct: 6   KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSP 65

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            ++ L  AF  +  LHL+ +++   ++ T +   + F S  +++ Y    +  L   HK 
Sbjct: 66  FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNF-SEDEVRFYSGEIILALEHLHKL 124

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQY 189
            +++RD+K  N+L+ S G + L DFGL++ F S ++  T+       Y APE++ G   +
Sbjct: 125 GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGH 184

Query: 190 GAGVDVWAAGCIFAELLN-RRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           G  VD W+ G +  ELL    PF L+G  +              T S+          V 
Sbjct: 185 GKAVDWWSLGILIFELLTGASPFTLEGERN--------------TQSE----------VS 220

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYF 294
            + +   P          +A DLL K+   DPK R+      A +  EH +F
Sbjct: 221 RRILKCDP--PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFF 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 76.9 bits (189), Expect = 1e-15
 Identities = 98/357 (27%), Positives = 149/357 (41%), Gaps = 73/357 (20%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIE 75
            VLG+G++G V  A   ++G+  A+K ++  +  Q + V  T   +  L      P + +
Sbjct: 1   RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L   F     L  V EF+   DL   I+ +  F   A  + Y       L F H K +++
Sbjct: 61  LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRF-DEARARFYAAEITSALMFLHDKGIIY 119

Query: 135 RDMKPNNLLIGSHGQLKLADFGLAR--IF---------GSPDRRFTHQVFARWYRAPELL 183
           RD+K +N+L+   G  KLADFG+ +  IF         G+PD           Y APE+L
Sbjct: 120 RDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPD-----------YIAPEIL 168

Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
                YG  VD WA G +  E+L    PF   + D      +F A              L
Sbjct: 169 -QEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAI-------------L 209

Query: 243 PDYVEYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITA------QQALEHRYFS 295
            D V Y            P+  S DA+D+L    T +P  R+ +      +  L H +F 
Sbjct: 210 NDEVVY------------PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFK 257

Query: 296 S---APLPTEPNKLP-RPATKRASKASDFNP---QEGPTVLSPPRKTRRVMPDREGF 345
                 L     + P RP  K     S+F+P   +E P VL+P  ++   M +++ F
Sbjct: 258 ELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKEDP-VLTPIEESLLPMINQDEF 313

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 75.7 bits (186), Expect = 2e-15
 Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 13/203 (6%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE---IKLLKELKSPH 72
           ++G G +G VY      TG+  A+K   K R+ K K+G    AL E   + L+     P 
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI-KMKQGETL-ALNERIMLSLVSTGDCPF 58

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I+ +  AF     L  + + M   DL   +    +F S A+++ Y    + GL   H ++
Sbjct: 59  IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEAEMRFYAAEIILGLEHMHNRF 117

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           V++RD+KP N+L+  HG ++++D GLA  F    ++    V    Y APE+L     Y +
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDS 175

Query: 192 GVDVWAAGCIFAELLN-RRPFLQ 213
             D ++ GC+  +LL    PF Q
Sbjct: 176 SADWFSLGCMLFKLLRGHSPFRQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 75.2 bits (185), Expect = 2e-15
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 30/202 (14%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-----KQKEGVNFTALREIKLLKELKSPH 72
           E +G+G +G VYK +  K    VA+K  R       K+K       L+E ++LK+   P+
Sbjct: 1   EKIGKGNFGDVYKGV-LKGNTEVAVKTCRSTLPPDLKRK------FLQEAEILKQYDHPN 53

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK---GLAFCH 128
           I++LI     K  +++V E +    L T +R     L+   +K  +QM+L    G+ +  
Sbjct: 54  IVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLT---VKKLLQMSLDAAAGMEYLE 110

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----IFGSPDRRFTHQVFARWYRAPELL 183
            K  +HRD+   N L+G +  LK++DFG++R     I+   D     Q+  +W  APE L
Sbjct: 111 SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL--KQIPIKW-TAPEAL 167

Query: 184 -FGAKQYGAGVDVWAAGCIFAE 204
            +G  +Y +  DVW+ G +  E
Sbjct: 168 NYG--RYTSESDVWSYGILLWE 187

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 75.6 bits (186), Expect = 2e-15
 Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 10/201 (4%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           VLG+G +G V       TG+  A KK+   R+ K+K      AL E ++L+++ S  ++ 
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG--EAMALNEKQILEKVNSRFVVS 64

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           L  A+  K  L LV   M   DL+  I N  N          Y      GL   H++ ++
Sbjct: 65  LAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+  +G ++++D GLA      +     +V    Y APE++   ++Y    
Sbjct: 125 YRDLKPENILLDDYGHIRISDLGLAVEIPEGE-TIRGRVGTVGYMAPEVV-KNERYTFSP 182

Query: 194 DVWAAGCIFAELLN-RRPFLQ 213
           D W  GC+  E++  + PF Q
Sbjct: 183 DWWGLGCLIYEMIEGKSPFRQ 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 75.3 bits (185), Expect = 2e-15
 Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 25/212 (11%)

Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLL 65
           RYLK+  VLGEG +G V    Y   +  TG+ VA+K +   K++ G   T+   +EI +L
Sbjct: 4   RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTL---KRECGQQNTSGWKKEINIL 60

Query: 66  KELKSPHIIELIDAFPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK 122
           K L   +I++       +G   L L+ E++    L   +    + L  A +  + Q   +
Sbjct: 61  KTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNL--AQLLLFAQQICE 118

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR------W 176
           G+A+ H +  +HRD+   N+L+ +   +K+ DFGLA+    P+    ++V         W
Sbjct: 119 GMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFW 176

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNR 208
           Y A E L   K   A  DVW+ G    ELL  
Sbjct: 177 Y-AVECLKENKFSYAS-DVWSFGVTLYELLTH 206

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 75.8 bits (186), Expect = 3e-15
 Identities = 88/353 (24%), Positives = 146/353 (41%), Gaps = 65/353 (18%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G++G V  A    T +  AIK ++  +  Q + V  T + +  L    K P + +L
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQL 66

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+ V E++   DL   I+    F  P  +    ++ + GL F H K +++R
Sbjct: 67  HSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAI-GLFFLHSKGIIYR 125

Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELLF 184
           D+K +N+++ S G +K+ADFG+ +             G+PD           Y APE++ 
Sbjct: 126 DLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPD-----------YIAPEII- 173

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             + YG  VD WA G +  E+L  +   +G  D D+L +       A P           
Sbjct: 174 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNVAYPK---------- 222

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPL 299
                            S S +A+ +   + T  P  R+       +   EH +F     
Sbjct: 223 -----------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 265

Query: 300 PT-EPNKLPRPATKRAS--KASDFNP--QEGPTVLSPPRKTRRVMPDREGFEG 347
              E  ++  P   +A    A +F+      P VL+PP +   +  D+  FEG
Sbjct: 266 EKLERKEVQPPYKPKACGRDAENFDKFFTRHPPVLTPPDQEVIMNLDQSEFEG 318

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 76.0 bits (187), Expect = 3e-15
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 38/232 (16%)

Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE 61
            L  K  D +   +V+G G +G V       + Q  A+K   K  + K+ +   F   R+
Sbjct: 37  KLRMKAED-FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERD 95

Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQM 119
           I  +    S  I++L  AF     L++V E+M   DL  ++ N +I   P    + Y   
Sbjct: 96  I--MAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDI---PEKWARFYTAE 150

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF---------GLAR---IFGSPDRR 167
            +  L   H    +HRD+KP+N+L+   G LKLADF         G+ R     G+PD  
Sbjct: 151 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPD-- 208

Query: 168 FTHQVFARWYRAPELLF---GAKQYGAGVDVWAAGCIFAELL-NRRPFLQGS 215
                    Y +PE+L    G   YG   D W+ G    E+L    PF   S
Sbjct: 209 ---------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 76.1 bits (187), Expect = 3e-15
 Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 22/262 (8%)

Query: 51  KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSP 110
           K G   T L E  LL+ +  P +I + D         +V     +DL T +   +  L  
Sbjct: 97  KIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPI 156

Query: 111 ADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170
                  +  L+GL + H + ++HRD+K  N+ I    Q+ + D G A+ F      F  
Sbjct: 157 DQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQ-FPVVAPAFLG 215

Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL----------NRRPFLQGSSDIDQ 220
                   APE+L   K Y +  D+W+AG +  E+L             P     S    
Sbjct: 216 LAGTVETNAPEVLARDK-YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSH 274

Query: 221 LGKIFAAFGTATPSQW---PDLAYLPDYVEYQYVAAPPLRSLFPSAS-----DDALDLLS 272
           L KI +      P ++   P    +  ++EY  +   P  + +P         D   L+ 
Sbjct: 275 LLKIISTLKV-HPEEFPRDPGSRLVRGFIEYASLERQP-YTRYPCFQRVNLPIDGEFLVH 332

Query: 273 KMFTYDPKARITAQQALEHRYF 294
           KM T+D   R +A++ L +  F
Sbjct: 333 KMLTFDAAMRPSAEEILNYPMF 354

Length = 357

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 74.4 bits (183), Expect = 4e-15
 Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 16/207 (7%)

Query: 16  KREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTA-LREIKLLKELKS 70
           K +VLG G +G VYK +    G+     VAIK +R  ++         L E  ++  +  
Sbjct: 11  KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLR--EETSPKANKEILDEAYVMASVDH 68

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           PH++ L+        + L+ + M    L   +RN    +    + ++     KG+++  +
Sbjct: 69  PHVVRLLGICLSS-QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE 127

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFGA 186
           K ++HRD+   N+L+ +   +K+ DFGLA++    ++ +     +V  +W  A E +   
Sbjct: 128 KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWM-ALESILHR 186

Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPF 211
             Y    DVW+ G    EL+    +P+
Sbjct: 187 I-YTHKSDVWSYGVTVWELMTFGAKPY 212

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 74.9 bits (184), Expect = 8e-15
 Identities = 81/301 (26%), Positives = 124/301 (41%), Gaps = 40/301 (13%)

Query: 20  LGEGTYGVVYKAIDTKTG----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           L  G+ G V+  + TK G    + V +K +  GK          REI +LK +    II 
Sbjct: 100 LTPGSEGEVF--VCTKHGDEQRKKVIVKAVTGGKTPG-------REIDILKTISHRAIIN 150

Query: 76  LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
           LI A+  K  + +V    + DL T +  +   L      +  +  L+ LA+ H + ++HR
Sbjct: 151 LIHAYRWKSTVCMVMPKYKCDLFTYVDRSGP-LPLEQAITIQRRLLEALAYLHGRGIIHR 209

Query: 136 DMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARW-----YRAPELLFGAKQY 189
           D+K  N+ +       L DFG A ++   PD   T Q +  W       +PELL     Y
Sbjct: 210 DVKTENIFLDEPENAVLGDFGAACKLDAHPD---TPQCYG-WSGTLETNSPELL-ALDPY 264

Query: 190 GAGVDVWAAGCIFAELL-NRRPFL--QGSSDIDQLGKIFAAFGTATPSQWP---DLAYLP 243
            A  D+W+AG +  E+          Q  S   QL  I        P ++P         
Sbjct: 265 CAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCM-QVHPLEFPQNGSTNLCK 323

Query: 244 DYVEYQYVAAPP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
            + +Y  V  PP      +R        D   L++KM T+D + R +AQ  L    F+  
Sbjct: 324 HFKQYAIVLRPPYTIPPVIRKYGMHM--DVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381

Query: 298 P 298
           P
Sbjct: 382 P 382

Length = 392

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 73.0 bits (179), Expect = 1e-14
 Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV+     +    VAIK I  G   E  +F  + E K++ +L  P +++L   
Sbjct: 12  LGSGQFGVVHLG-KWRAQIKVAIKAINEGAMSEE-DF--IEEAKVMMKLSHPKLVQLYGV 67

Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  L++V EFME   L   +R     LS   + S  Q   +G+ +  +   +HRD+ 
Sbjct: 68  CTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLA 127

Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+ S G +K++DFG+ R     D  +T    A++   +  PE +F   +Y +  DV
Sbjct: 128 ARNCLVSSTGVVKVSDFGMTRYV--LDDEYTSSSGAKFPVKWSPPE-VFNFSKYSSKSDV 184

Query: 196 WAAGCIFAELLN--RRPF 211
           W+ G +  E+    + PF
Sbjct: 185 WSFGVLMWEVFTEGKMPF 202

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 73.5 bits (180), Expect = 1e-14
 Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 17/221 (7%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIEL 76
           E +G+GTYG VYK  + K G   A+K +        V+     E  +L+ L + P++++ 
Sbjct: 28  ETIGKGTYGKVYKVTNKKDGSLAAVKIL---DPISDVDEEIEAEYNILQSLPNHPNVVKF 84

Query: 77  IDAFPHK-----GNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
              F        G L LV E       T+L   +      L  A I   +   L GL   
Sbjct: 85  YGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL 144

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H   ++HRD+K NN+L+ + G +KL DFG++    S   R    V   ++ APE++   +
Sbjct: 145 HNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ 204

Query: 188 Q----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
           Q    Y A  DVW+ G    EL +  P L     +  L KI
Sbjct: 205 QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKI 245

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 73.5 bits (180), Expect = 1e-14
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)

Query: 17  REVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHI 73
           ++V+GEG +G V KA   K G     AIK+++    + +  +F    E+ L K    P+I
Sbjct: 12  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNI 70

Query: 74  IELIDAFPHKGNLHLVFEF---------------METDLETVIRN-TNIFLSPADIKSYM 117
           I L+ A  H+G L+L  E+               +ETD    I N T   LS   +  + 
Sbjct: 71  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
               +G+ +  +K  +HRD+   N+L+G +   K+ADFGL+R      ++   ++  RW 
Sbjct: 131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 190

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
               L +    Y    DVW+ G +  E+++
Sbjct: 191 AIESLNYSV--YTTNSDVWSYGVLLWEIVS 218

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 73.7 bits (181), Expect = 1e-14
 Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 6/215 (2%)

Query: 17  REVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
            +VLG+G++G V+   K      GQ  A+K ++    K         E  +L E+  P I
Sbjct: 1   LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFI 60

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           ++L  AF  +G L+L+ +F+   DL T +    +F +  D+K Y+      L   H   +
Sbjct: 61  VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALALDHLHSLGI 119

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           ++RD+KP N+L+   G +KL DFGL++     +++         Y APE++   + +   
Sbjct: 120 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQS 178

Query: 193 VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
            D W+ G +  E+L      QG    + +  I  A
Sbjct: 179 ADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA 213

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 46/231 (19%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGV-NFTALREIKLLKELKSPHII 74
           +V+G G +G V       TG   A+KK+R  +  +KE V +  A R+I  L E  +P ++
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDI--LAEADNPWVV 64

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           +L  +F  +  L+L+ E++   D+ T++   + F +  + + Y+  T+  +   HK   +
Sbjct: 65  KLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTF-TEEETRFYIAETILAIDSIHKLGYI 123

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV--------------------- 172
           HRD+KP+NLL+ + G +KL+DFGL        R   +++                     
Sbjct: 124 HRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKR 183

Query: 173 -FARW----------------YRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
               W                Y APE +F    Y    D W+ G I  E+L
Sbjct: 184 KAETWKRNRRALAYSTVGTPDYIAPE-VFLQTGYNKECDWWSLGVIMYEML 233

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 73.0 bits (179), Expect = 2e-14
 Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 21/209 (10%)

Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           R+LKR   LGEG +G V    Y      TG+ VA+K ++       +     +EI++L+ 
Sbjct: 4   RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA-DLKKEIEILRN 62

Query: 68  LKSPHIIELIDAFPHKGN--LHLVFEFMETDL--ETVIRNTNIFLSPADIKSYMQMTLKG 123
           L   +I++        G   + L+ EF+ +    E + RN N       +K  +Q+  KG
Sbjct: 63  LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQIC-KG 121

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFARWY 177
           + +   +  +HRD+   N+L+ S  Q+K+ DFGL +   +    +T +      VF  WY
Sbjct: 122 MDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVF--WY 179

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K Y A  DVW+ G    ELL
Sbjct: 180 -APECLIQSKFYIAS-DVWSFGVTLYELL 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 73.5 bits (180), Expect = 2e-14
 Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 39/286 (13%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+G+G++G V  A     G   A+K   K  + K+KE  +  A R + LLK LK P ++
Sbjct: 1   KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNV-LLKNLKHPFLV 59

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L  +F     L+ V +++   +L   ++    FL P   + Y       + + H   ++
Sbjct: 60  GLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPR-ARFYAAEVASAIGYLHSLNII 118

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+ S G + L DFGL +    P+   +       Y APE+L   + Y   V
Sbjct: 119 YRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVL-RKEPYDRTV 177

Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D W  G +  E+L   P    S D+ Q+                          Y  +  
Sbjct: 178 DWWCLGAVLYEMLYGLPPFY-SRDVSQM--------------------------YDNILH 210

Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFS 295
            PL+ L    +  A DLL  +   D + R+ A     +   H +FS
Sbjct: 211 KPLQ-LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFS 255

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 72.4 bits (177), Expect = 3e-14
 Identities = 75/290 (25%), Positives = 116/290 (40%), Gaps = 42/290 (14%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIEL 76
           E +G+GTYG V+K ++ K G   A+K +        ++     E  +LK L   P++++ 
Sbjct: 24  ETIGKGTYGKVFKVLNKKNGSKAAVKIL---DPIHDIDEEIEAEYNILKALSDHPNVVKF 80

Query: 77  IDAFPHKG-----NLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
              +  K       L LV E       TDL          +    I   +   L GL   
Sbjct: 81  YGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL 140

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H    +HRD+K NN+L+ + G +KL DFG++    S   R    V   ++ APE++   +
Sbjct: 141 HVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ 200

Query: 188 Q----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
           Q    Y A  DVW+ G    EL +  P L     +  L KI        P   P   + P
Sbjct: 201 QLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKI--------PRNPPPTLHQP 252

Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
           +                   S++  D + K  T D + R T    L+H +
Sbjct: 253 EL-----------------WSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 72.0 bits (176), Expect = 4e-14
 Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 40/289 (13%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           VLG+G +G V       TG+  A KK+   R+ K+K      AL E ++L+++ S  ++ 
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG--ESMALNEKQILEKVNSRFVVS 64

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           L  A+  K  L LV   M   DL+  I +             Y      GL   H++ ++
Sbjct: 65  LAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+  HG ++++D GLA +     +    +V    Y APE++   ++Y    
Sbjct: 125 YRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSP 182

Query: 194 DVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
           D WA GC+  E++  + PF Q    I +                 ++  L   V+ +Y  
Sbjct: 183 DWWALGCLLYEMIAGQSPFQQRKKKIKR----------------EEVERLVKEVQEEYSE 226

Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
                      S DA  L   +   DPK R+      A++  EH  F  
Sbjct: 227 ---------KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 71.9 bits (176), Expect = 4e-14
 Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           VLG+G +G V       TG+  A K++   R+ K+K      AL E ++L+++ S  ++ 
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKG--ESMALNEKQILEKVNSQFVVN 64

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           L  A+  K  L LV   M   DL+  I N  N          Y    L GL   H++  +
Sbjct: 65  LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+  +G ++++D GLA      +     +V    Y APE+L   ++Y    
Sbjct: 125 YRDLKPENILLDDYGHIRISDLGLAVKIPEGE-SIRGRVGTVGYMAPEVL-NNQRYTLSP 182

Query: 194 DVWAAGCIFAELLN-RRPF 211
           D W  GC+  E++  + PF
Sbjct: 183 DYWGLGCLIYEMIEGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 71.2 bits (174), Expect = 5e-14
 Identities = 59/237 (24%), Positives = 115/237 (48%), Gaps = 16/237 (6%)

Query: 16  KREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
           K++V+G G +G V++ I    G+    VAIK ++ G  +K+  +F  L E  ++ +    
Sbjct: 9   KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDF--LSEASIMGQFSHH 66

Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +II L           ++ E+ME   L+  +R+ +   S   +   ++    G+ +    
Sbjct: 67  NIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM 126

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGA 186
             +HRD+   N+L+ S+ + K++DFGL+R+    P+  +T    ++  RW  APE +   
Sbjct: 127 NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRW-TAPEAI-AY 184

Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +++ +  DVW+ G +  E+++   RP+   S+  + +  I   F    P   P   Y
Sbjct: 185 RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-EVMKAINDGFRLPAPMDCPSAVY 240

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 70.9 bits (174), Expect = 5e-14
 Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 11/190 (5%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV+     +    VAIK IR G   E  +F  + E K++ +L  P++++L   
Sbjct: 12  LGSGQFGVVHLG-KWRGKIDVAIKMIREGAMSED-DF--IEEAKVMMKLSHPNLVQLYGV 67

Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + +V E+M    L   +R     L    +        + + +      +HRD+ 
Sbjct: 68  CTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLA 127

Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+G    +K++DFGLAR     D ++T     ++   +  PE+   ++ + +  DV
Sbjct: 128 ARNCLVGEDNVVKVSDFGLARYV--LDDQYTSSQGTKFPVKWAPPEVFDYSR-FSSKSDV 184

Query: 196 WAAGCIFAEL 205
           W+ G +  E+
Sbjct: 185 WSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 70.8 bits (173), Expect = 6e-14
 Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 19/200 (9%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E++GEG +G V +     TGQ VA+K I+     +      L E  ++ +L   +++ L+
Sbjct: 12  EIIGEGEFGAVLQG--EYTGQKVAVKNIKCDVTAQAF----LEETAVMTKLHHKNLVRLL 65

Query: 78  DAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKWVL 133
               H G L++V E M + +L   +R     L    +   +Q +L   +G+ +   K ++
Sbjct: 66  GVILHNG-LYIVMELMSKGNLVNFLRTRGRALVS--VIQLLQFSLDVAEGMEYLESKKLV 122

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+   N+L+   G  K++DFGLAR+          ++  +W  APE L   K++ +  
Sbjct: 123 HRDLAARNILVSEDGVAKVSDFGLARV--GSMGVDNSKLPVKW-TAPEAL-KHKKFSSKS 178

Query: 194 DVWAAGCIFAELLN--RRPF 211
           DVW+ G +  E+ +  R P+
Sbjct: 179 DVWSYGVLLWEVFSYGRAPY 198

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 70.8 bits (173), Expect = 7e-14
 Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 15/194 (7%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E+LG+G +G V+K    K    VA+K  +    +E +    L E ++LK+   P+I++LI
Sbjct: 1   ELLGKGNFGEVFKGT-LKDKTPVAVKTCKEDLPQE-LKIKFLSEARILKQYDHPNIVKLI 58

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                +  +++V E +   D  + +R     L    +  +      G+A+   K  +HRD
Sbjct: 59  GVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRD 118

Query: 137 MKPNNLLIGSHGQLKLADFGLAR-----IFGSPDRRFTHQVFARWYRAPELL-FGAKQYG 190
           +   N L+G +  LK++DFG++R     I+ S   +   Q+  +W  APE L +G  +Y 
Sbjct: 119 LAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK---QIPIKW-TAPEALNYG--RYS 172

Query: 191 AGVDVWAAGCIFAE 204
           +  DVW+ G +  E
Sbjct: 173 SESDVWSYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 70.9 bits (174), Expect = 7e-14
 Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 33/215 (15%)

Query: 18  EVLGEGTYGVVYKA-----IDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKELK 69
           E LGEG +G VYK       +  +  +VAIK ++     K ++   F   +E +L+ +L+
Sbjct: 11  EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQ--EFR--QEAELMSDLQ 66

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNI--------------FLSPADI 113
            P+I+ L+     +    ++FE++   DL E ++RN+                 L  +D 
Sbjct: 67  HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDF 126

Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQV 172
                    G+ +      +HRD+   N L+G    +K++DFGL+R   S D  R   + 
Sbjct: 127 LHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKS 186

Query: 173 F--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL 205
               RW     +L+G  ++    D+W+ G +  E+
Sbjct: 187 LLPVRWMPPEAILYG--KFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 70.8 bits (173), Expect = 8e-14
 Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 26/213 (12%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIE 75
           EV+G GTYG VYK    KTGQ  AIK + + + +E        EI +LK+  S H  I  
Sbjct: 22  EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEE---EIKLEINMLKKY-SHHRNIAT 77

Query: 76  LIDAF------PHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYM-QMTLKGL 124
              AF       H   L LV EF      TDL   ++NT       D  +Y+ +  L+GL
Sbjct: 78  YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDL---VKNTKGNALKEDWIAYICREILRGL 134

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELL 183
           A  H   V+HRD+K  N+L+  + ++KL DFG+ A++  +  RR T  +   ++ APE++
Sbjct: 135 AHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPYWMAPEVI 193

Query: 184 FGAKQ----YGAGVDVWAAGCIFAELLNRRPFL 212
              +     Y    D+W+ G    E+    P L
Sbjct: 194 ACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 70.6 bits (173), Expect = 9e-14
 Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQK--EGVNFTALREIKLLKELKSPHII 74
           LG+G +G V       TG+  A KK+   RL K+K  EG    A+ E ++L ++ S  I+
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEG----AMVEKRILAKVHSRFIV 56

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLAFCHK 129
            L  AF  K +L LV   M   DL   I N +     F  P     Y    + GL   H+
Sbjct: 57  SLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRAC-FYTAQIISGLEHLHQ 115

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           + +++RD+KP N+L+ + G ++++D GLA        +         + APELL G ++Y
Sbjct: 116 RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQG-EEY 174

Query: 190 GAGVDVWAAGCIFAELLNRR-PF 211
              VD +A G    E++  R PF
Sbjct: 175 DFSVDYFALGVTLYEMIAARGPF 197

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 70.3 bits (172), Expect = 9e-14
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 15/199 (7%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    +    VAIK I+ G   E   F  + E K++ +L    +++L   
Sbjct: 12  LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED-EF--IEEAKVMMKLSHEKLVQLYGV 67

Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  +++V E+M    L   +R       P+ +    +   +G+A+   K  +HRD+ 
Sbjct: 68  CTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLA 127

Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPELLFGAKQYGAGVD 194
             N L+   G +K++DFGL+R     D  +T  V +    RW   PE+L  +K + +  D
Sbjct: 128 ARNCLVDDQGCVKVSDFGLSRYV--LDDEYTSSVGSKFPVRW-SPPEVLLYSK-FSSKSD 183

Query: 195 VWAAGCIFAEL--LNRRPF 211
           VWA G +  E+  L + P+
Sbjct: 184 VWAFGVLMWEVYSLGKMPY 202

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 71.0 bits (174), Expect = 1e-13
 Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 27/216 (12%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELKSPHIIE 75
           +VLG+G++G V  A    T +  AIK ++     Q + V+ T   +  L    K P +  
Sbjct: 1   KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L   F  K  L  V E++   DL   I+ +  F  P       ++TL  L F H+  V++
Sbjct: 61  LHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTL-ALMFLHRHGVIY 119

Query: 135 RDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELL 183
           RD+K +N+L+ + G  KLADFG+ +             G+PD           Y APE+L
Sbjct: 120 RDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPD-----------YIAPEIL 168

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID 219
               +YG  VD WA G +  E++  +P  +  ++ D
Sbjct: 169 -QELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 72.5 bits (177), Expect = 1e-13
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 34/234 (14%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G +G V+     +T +    K I     KE      + E+ +++ELK  +I+  ID 
Sbjct: 21  IGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDR 80

Query: 80  FPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT---LKGLAFCHK---- 129
           F +K N  L+++ EF +  DL   I+         +  + + +T   L  LA+CH     
Sbjct: 81  FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDG 140

Query: 130 ---KWVLHRDMKPNNLLIGSH----GQL-------------KLADFGLARIFGSPDRRFT 169
              + VLHRD+KP N+ + +     G++             K+ DFGL++  G       
Sbjct: 141 PNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI--ESMA 198

Query: 170 HQ-VFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221
           H  V   +Y +PELL    K Y    D+WA GCI  EL + +     +++  QL
Sbjct: 199 HSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQL 252

Length = 1021

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 70.8 bits (173), Expect = 1e-13
 Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 51/259 (19%)

Query: 12  DRYLKREVLGEGTYGVVY------------KAIDTKTGQ--TVAIKKIRLGKQKEGVNFT 57
            +   +E LGEG +G V+            +      GQ   VA+K +R    K   N  
Sbjct: 5   QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARN-D 63

Query: 58  ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKS- 115
            L+EIK++  LK+P+II L+        L ++ E+ME  DL       N FLS  +I+S 
Sbjct: 64  FLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDL-------NQFLSQREIEST 116

Query: 116 ----------------YMQMTL-KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158
                           YM + +  G+ +      +HRD+   N L+G+H  +K+ADFG++
Sbjct: 117 FTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMS 176

Query: 159 RIFGSPD--RRFTHQVFA-RWYRAPELLFGAKQYGAGVDVWAAGCIFAE---LLNRRPF- 211
           R   S D  R     V   RW     +L G  ++    DVWA G    E   L   +P+ 
Sbjct: 177 RNLYSGDYYRIQGRAVLPIRWMAWESILLG--KFTTASDVWAFGVTLWEMFTLCKEQPYS 234

Query: 212 -LQGSSDIDQLGKIFAAFG 229
            L     I+  G+ F   G
Sbjct: 235 LLSDEQVIENTGEFFRNQG 253

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 71.2 bits (174), Expect = 1e-13
 Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 37/226 (16%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLK 66
           A+ Y   +V+G G +G V + +  K+ Q V     + K  + K+ +   F   R+I    
Sbjct: 42  AEDYDVVKVIGRGAFGEV-QLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 100

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
              SP +++L  AF     L++V E+M   DL  ++ N ++    A  K Y    +  L 
Sbjct: 101 --NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWA--KFYTAEVVLALD 156

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA------------RIFGSPDRRFTHQVF 173
             H   ++HRD+KP+N+L+  HG LKLADFG                 G+PD        
Sbjct: 157 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPD-------- 208

Query: 174 ARWYRAPELLF---GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGS 215
              Y +PE+L    G   YG   D W+ G  +F  L+   PF   S
Sbjct: 209 ---YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 70.2 bits (172), Expect = 1e-13
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 32/214 (14%)

Query: 12  DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++    +   +F   REI++LK
Sbjct: 3   ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFE--REIEILK 60

Query: 67  ELKSPHIIELIDAFPHKG--------NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYM 117
            L+  +I++      +KG        NL LV E++    L   ++     L    +  Y 
Sbjct: 61  SLQHDNIVK------YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYA 114

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------ 171
               KG+ +   K  +HRD+   N+L+ S  ++K+ DFGL ++       +  +      
Sbjct: 115 SQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESP 174

Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL 205
           +F  WY APE L  +K +    DVW+ G +  EL
Sbjct: 175 IF--WY-APESLTESK-FSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 33/219 (15%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKELKSPHII 74
            LGEG +G V KA   +         + +   KE  + + LR    E  LLK++  PH+I
Sbjct: 7   TLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVI 66

Query: 75  ELIDAFPHKGNLHLVFEFME-TDLETVIR----------------NTNIFLSP------- 110
           +L  A    G L L+ E+ +   L + +R                N++   +P       
Sbjct: 67  KLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTM 126

Query: 111 ADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---RR 167
            D+ S+     +G+ +  +  ++HRD+   N+L+    ++K++DFGL+R     D   +R
Sbjct: 127 GDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKR 186

Query: 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              ++  +W  A E LF    Y    DVW+ G +  E++
Sbjct: 187 SKGRIPVKWM-AIESLFD-HIYTTQSDVWSFGVLLWEIV 223

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 70.3 bits (172), Expect = 2e-13
 Identities = 73/269 (27%), Positives = 113/269 (42%), Gaps = 42/269 (15%)

Query: 12  DRYLKREVLGEGTYGVVYK--------------AIDTKTGQT--VAIKKIRLGKQKEGVN 55
            R   +E LGEG +G V+               ++D    Q   VA+K +R    K   N
Sbjct: 5   KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARN 64

Query: 56  FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL----------ETVIRNT 104
              L+EIK++  LK P+II L+        L ++ E+ME  DL          E   +  
Sbjct: 65  -DFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123

Query: 105 NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164
            + +S + +         G+ +      +HRD+   N L+G +  +K+ADFG++R   S 
Sbjct: 124 VVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSG 183

Query: 165 D--RRFTHQVFA-RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN---RRPFLQGSSD- 217
           D  R     V   RW     +L G  ++    DVWA G    E+L     +P+ Q S + 
Sbjct: 184 DYYRIQGRAVLPIRWMSWESILLG--KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241

Query: 218 -IDQLGKIFAAFGTAT----PSQWPDLAY 241
            I+  G+ F   G       P+  PD  Y
Sbjct: 242 VIENTGEFFRDQGRQVYLPKPALCPDSLY 270

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 31/225 (13%)

Query: 15  LKREVLGEGTYGVVYKAI--DTKTGQ---TVAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+ +      G+    VAIK +      +E + F  L E  ++KE 
Sbjct: 10  LIRE-LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEF--LNEASVMKEF 66

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNT------NIFLSPADIKSYMQMTL 121
              H++ L+          +V E M + DL++ +R+       N  L P  ++ ++QM  
Sbjct: 67  NCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAA 126

Query: 122 ---KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGS----PDRRFTHQVF 173
               G+A+   K  +HRD+   N ++     +K+ DFG+ R I+ +       +    V 
Sbjct: 127 EIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 185

Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSS 216
            RW  APE L     +    DVW+ G +  E+  L  +P+ QG S
Sbjct: 186 -RWM-APESLKDGV-FTTKSDVWSFGVVLWEMATLAEQPY-QGLS 226

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 69.0 bits (168), Expect = 4e-13
 Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 20/210 (9%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKS-PHIIE 75
           E++G GTYG VYK    KTGQ  AIK + + G ++E +     +EI +LK+     +I  
Sbjct: 12  ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK----QEINMLKKYSHHRNIAT 67

Query: 76  LIDAFPHKG------NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYM-QMTLKGLAFC 127
              AF  K        L LV EF     +  +I+NT       +  +Y+ +  L+GL+  
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGA 186
           H+  V+HRD+K  N+L+  + ++KL DFG+ A++  +  RR T  +   ++ APE++   
Sbjct: 128 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPYWMAPEVIACD 186

Query: 187 KQ----YGAGVDVWAAGCIFAELLNRRPFL 212
           +     Y    D+W+ G    E+    P L
Sbjct: 187 ENPDATYDFKSDLWSLGITAIEMAEGAPPL 216

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 69.0 bits (169), Expect = 4e-13
 Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 51/297 (17%)

Query: 19  VLGEGTYGVVY---KAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREIKLLKELKSP 71
           VLG G YG V+   K      G+  A+K ++    + K K   +    R++ L    + P
Sbjct: 7   VLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQV-LEAVRRCP 65

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            ++ L  AF     LHL+ +++   +L T +     F + ++++ Y+   +  L   H+ 
Sbjct: 66  FLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHF-TESEVRVYIAEIVLALDHLHQL 124

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQ- 188
            +++RD+K  N+L+ S G + L DFGL++ F + +    +       Y APE++ G    
Sbjct: 125 GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGG 184

Query: 189 YGAGVDVWAAGCIFAELLN-RRPF-LQG----SSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +   VD W+ G +  ELL    PF + G     S+I +  +I                  
Sbjct: 185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR--RILK---------------- 226

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI---TAQQALEHRYFSS 296
                    + PP        S +A D + K+   DPK R+    A +   H +F  
Sbjct: 227 ---------SKPPFPKTM---SAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQG 271

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 69.2 bits (169), Expect = 4e-13
 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 8/192 (4%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKE---LKSPHII 74
           +G+GT+G VY+     T +  A+K +  +    K+ V  T + E  +L      +SP I+
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHT-IGERNILVRTLLDESPFIV 59

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L  +F    +L+LV ++M   +L   ++    F S    K Y+   +  L   HK  ++
Sbjct: 60  GLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRF-SEDRAKFYIAELVLALEHLHKYDIV 118

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+ + G + L DFGL++   + ++          Y APE+L   K Y   V
Sbjct: 119 YRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHV 178

Query: 194 DVWAAGCIFAEL 205
           D W+ G +  E+
Sbjct: 179 DFWSLGVLVFEM 190

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 69.3 bits (170), Expect = 4e-13
 Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 62/353 (17%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS----PHII 74
           VLG G +G V  A   KTG+  AIK ++ G         +L   K + E  +    P ++
Sbjct: 6   VLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLV 65

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L   F  + ++  V E+    DL   I +T++F  P     Y    + GL + H+  ++
Sbjct: 66  NLFACFQTEDHVCFVMEYAAGGDLMMHI-HTDVFSEPR-AVFYAACVVLGLQYLHENKIV 123

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARI---FGSPDRRF--THQVFARWYRAPELLFGAKQ 188
           +RD+K +NLL+ + G +K+ADFGL +    FG     F  T +     + APE+L     
Sbjct: 124 YRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPE-----FLAPEVLTE-TS 177

Query: 189 YGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           Y   VD W  G  I+  L+   PF  G    D   ++F +              + D V 
Sbjct: 178 YTRAVDWWGLGVLIYEMLVGESPF-PG----DDEEEVFDSI-------------VNDEVR 219

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPTE 302
           Y        R L    S +A+ ++ ++   +P+ R+      A+   +  +F        
Sbjct: 220 YP-------RFL----SREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDL 268

Query: 303 PNKLPR----PATKRASKASDFNP---QEGPTVLSPPRKTRRVMP-DREGFEG 347
             +  +    P  K     S+F+     E P VL+PPR+ R +   ++E F G
Sbjct: 269 LARKIKPPFVPTIKGPEDVSNFDEEFTSEAP-VLTPPREPRLLTEEEQELFRG 320

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 69.5 bits (170), Expect = 5e-13
 Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 7/148 (4%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+G+G +G V       TG+  A+K   K  + K+ +  +  A R++  L E  SP ++
Sbjct: 7   KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDV--LAESDSPWVV 64

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L  +F     L+L+ EF+   DL T++   + F S    + YM   +  +   HK   +
Sbjct: 65  SLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTF-SEDVTRFYMAECVLAIEAVHKLGFI 123

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIF 161
           HRD+KP+N+LI   G +KL+DFGL+  F
Sbjct: 124 HRDIKPDNILIDRGGHIKLSDFGLSTGF 151

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 69.3 bits (169), Expect = 6e-13
 Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKELKS 70
           D +   +V+G G +G V       TG   A+K +R     E      +R E  +L E   
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG 60

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
             ++++  +F  K NL+L+ EF+   D+ T++   +  LS    + Y+  T+  +   H+
Sbjct: 61  AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDT-LSEEATQFYIAETVLAIDAIHQ 119

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGL 157
              +HRD+KP+NLL+ + G +KL+DFGL
Sbjct: 120 LGFIHRDIKPDNLLLDAKGHVKLSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 68.9 bits (168), Expect = 6e-13
 Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 3/142 (2%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKELKSPHIIEL 76
           +V+G G +G V       TG   A+K +R     E      +R E  +L E  S  ++++
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKM 66

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
             +F  K NL+L+ EF+   D+ T++   +  L+  + + Y+  T+  +   H+   +HR
Sbjct: 67  FYSFQDKLNLYLIMEFLPGGDMMTLLMKKDT-LTEEETQFYIAETVLAIDSIHQLGFIHR 125

Query: 136 DMKPNNLLIGSHGQLKLADFGL 157
           D+KP+NLL+ S G +KL+DFGL
Sbjct: 126 DIKPDNLLLDSKGHVKLSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 68.9 bits (168), Expect = 7e-13
 Identities = 89/321 (27%), Positives = 138/321 (42%), Gaps = 55/321 (17%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           +V+G+G++G V  A     G+  A+K    KI L + KE  +  A R + LLK +K P +
Sbjct: 1   KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNR-KEQKHIMAERNV-LLKNVKHPFL 58

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + L  +F     L+ V +F+   +L   ++    F  P   + Y       L + H   +
Sbjct: 59  VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPR-ARFYAAEIASALGYLHSINI 117

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ-YGA 191
           ++RD+KP N+L+ S G + L DFGL +   +     T       Y APE++   KQ Y  
Sbjct: 118 VYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVI--RKQPYDN 175

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            VD W  G +  E+L   P                      P    D+A + D + ++  
Sbjct: 176 TVDWWCLGAVLYEMLYGLP----------------------PFYCRDVAEMYDNILHK-- 211

Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL----EHRYFSSAP-LPTEPNKL 306
              PL  L P AS  A  +L ++   D + R+ A++      EH +F S      E  K+
Sbjct: 212 ---PL-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKI 267

Query: 307 PRPATKRASKASDFNPQ-EGP 326
           P P          FNP  EGP
Sbjct: 268 PPP----------FNPNVEGP 278

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 68.3 bits (167), Expect = 9e-13
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 11/198 (5%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           V+G+G++G V  A     G+  A+K   K  + K+KE  +  A R + LLK +K P ++ 
Sbjct: 2   VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNV-LLKNVKHPFLVG 60

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L  +F     L+ V +++   +L   ++    F  P   + Y       L + H   +++
Sbjct: 61  LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRA-RFYAAEIASALGYLHSLNIIY 119

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF--ARWYRAPELLFGAKQYGAG 192
           RD+KP N+L+ S G + L DFGL +     +   T   F     Y APE+L   + Y   
Sbjct: 120 RDLKPENILLDSQGHVVLTDFGLCK--EGIEHSKTTSTFCGTPEYLAPEVLR-KQPYDRT 176

Query: 193 VDVWAAGCIFAELLNRRP 210
           VD W  G +  E+L   P
Sbjct: 177 VDWWCLGAVLYEMLYGLP 194

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 67.4 bits (164), Expect = 1e-12
 Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 19/233 (8%)

Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           L+ EV LG+G +G V+      T + VAIK ++ G          L+E +++K+L+   +
Sbjct: 8   LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKL 63

Query: 74  IELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           ++L  A   +  +++V E+M     L+ +      +L    +         G+A+  +  
Sbjct: 64  VQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 122

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGAK 187
            +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G  
Sbjct: 123 YVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG-- 178

Query: 188 QYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           ++    DVW+ G +  EL    R P+  G  + + L ++   +    P + P+
Sbjct: 179 RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVLDQVERGYRMPCPPECPE 230

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 65/300 (21%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIE 75
           ++LG+GT+G V    +  TG+  A+K +R  +   K+ V  T + E ++L+  + P +  
Sbjct: 1   KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHPFLTA 59

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L  AF     L  V E+    +L   +    +F +    + Y    +  L + H + V++
Sbjct: 60  LKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVY 118

Query: 135 RDMKPNNLLIGSHGQLKLADFGLA----------RIF-GSPDRRFTHQVFARWYRAPELL 183
           RD+K  NL++   G +K+ DFGL           + F G+P+           Y APE+L
Sbjct: 119 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE-----------YLAPEVL 167

Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
                YG  VD W  G +  E++  R PF   + D ++L                     
Sbjct: 168 -EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------- 203

Query: 243 PDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
                ++ +    +R  FP + S +A  LL+ +   DPK R+      A++ +EHR+F S
Sbjct: 204 -----FELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 67.1 bits (164), Expect = 1e-12
 Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 29/207 (14%)

Query: 15  LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKELKSPHI 73
           L+R+ LG G +G V++ +  K    VAIK +   K  + +      +E++ LK L+  H+
Sbjct: 10  LERK-LGSGYFGEVWEGL-WKNRVRVAIKIL---KSDDLLKQQDFQKEVQALKRLRHKHL 64

Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL--------KGLA 125
           I L         ++++ E ME        +   FL   + +     +L        +G+A
Sbjct: 65  ISLFAVCSVGEPVYIITELMEKG------SLLAFLRSPEGQVLPVASLIDMACQVAEGMA 118

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI----FGSPDRRFTHQVFARWYRAPE 181
           +  ++  +HRD+   N+L+G     K+ADFGLAR+              ++  +W  APE
Sbjct: 119 YLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS---DKKIPYKW-TAPE 174

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNR 208
                  +    DVW+ G +  E+   
Sbjct: 175 AA-SHGTFSTKSDVWSFGILLYEMFTY 200

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 66.6 bits (162), Expect = 3e-12
 Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 7/197 (3%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+G+G++G V  A      +  A+K   K  + K+KE  +  + R + LLK +K P ++
Sbjct: 1   KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLV 59

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L  +F     L+ V +++   +L   ++    FL P   + Y       L + H   ++
Sbjct: 60  GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR-ARFYAAEIASALGYLHSLNIV 118

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+ S G + L DFGL +     +   +       Y APE+L   + Y   V
Sbjct: 119 YRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLH-KQPYDRTV 177

Query: 194 DVWAAGCIFAELLNRRP 210
           D W  G +  E+L   P
Sbjct: 178 DWWCLGAVLYEMLYGLP 194

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 66.1 bits (161), Expect = 3e-12
 Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 18/203 (8%)

Query: 16  KREVLGEGTYGVVYKAIDTKTGQT----VAIKKI--RLGKQKEGVNFTALREIKL-LKEL 68
           K ++LG G +G V+K I    G +    VAIK I  R G+Q     F  + +  L +  L
Sbjct: 11  KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQ----TFQEITDHMLAMGSL 66

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
              +I+ L+   P   +L LV +      L   +R     L P  + ++     KG+ + 
Sbjct: 67  DHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYL 125

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---THQVFARWYRAPELLF 184
            +  ++HR++   N+L+ S   +++ADFG+A +    D+++    H+   +W     +LF
Sbjct: 126 EEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF 185

Query: 185 GAKQYGAGVDVWAAGCIFAELLN 207
           G  +Y    DVW+ G    E+++
Sbjct: 186 G--RYTHQSDVWSYGVTVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 66.2 bits (161), Expect = 4e-12
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 28/226 (12%)

Query: 15  LKREVLGEGTYGVV-----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           LKRE LGEG +G V     Y     +    VA+K ++        +F   RE +LL  L+
Sbjct: 9   LKRE-LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH--REAELLTNLQ 65

Query: 70  SPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR------------NTNIFLSPADIKSY 116
             HI++          L +VFE+M+  DL   +R            N    L+ + +   
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHI 125

Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFA 174
            Q    G+ +   +  +HRD+   N L+G +  +K+ DFG++R   S D  R   H +  
Sbjct: 126 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 185

Query: 175 -RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSD 217
            RW     +++  +++    DVW+ G +  E+    ++P+ Q S++
Sbjct: 186 IRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 229

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 66.3 bits (161), Expect = 5e-12
 Identities = 90/353 (25%), Positives = 146/353 (41%), Gaps = 62/353 (17%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           ++LG+GT+G V    +  +G+  A+K  K  +   K+ V  T L E ++LK  + P +  
Sbjct: 1   KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHT-LTESRVLKNTRHPFLTS 59

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L  +F  K  L  V E++   +L   +    +F S    + Y    +  L + H   +++
Sbjct: 60  LKYSFQTKDRLCFVMEYVNGGELFFHLSRERVF-SEDRTRFYGAEIVSALDYLHSGKIVY 118

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF--ARWYRAPELLFGAKQYGAG 192
           RD+K  NL++   G +K+ DFGL +  G  D   T + F     Y APE+L     YG  
Sbjct: 119 RDLKLENLMLDKDGHIKITDFGLCK-EGITDAA-TMKTFCGTPEYLAPEVL-EDNDYGRA 175

Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VD W  G +  E++  R PF     +     K+F            +L  + D       
Sbjct: 176 VDWWGLGVVMYEMMCGRLPFYNQDHE-----KLF------------ELILMEDIK----- 213

Query: 252 AAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP-TEPN 304
                   FP + S DA  LLS +   DP  R+      A++ + H +F+          
Sbjct: 214 --------FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDK 265

Query: 305 KLPRPATKRASKASD-------FNPQEGPTVLSPPRKTRRVMPDREGFEGNAN 350
           KL  P   + +  +D       F  Q     ++PP K      D +G +   N
Sbjct: 266 KLVPPFKPQVTSETDTRYFDEEFTAQT--ITITPPEKY-----DEDGMDCMDN 311

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 65.4 bits (159), Expect = 5e-12
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 13/194 (6%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E +G G +G V+          VA+K  R     + +    L+E ++LK+   P+I+ LI
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIVRLI 59

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                K  +++V E ++  D  T +R     L   ++   ++    G+ +   K  +HRD
Sbjct: 60  GVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD 119

Query: 137 MKPNNLLIGSHGQLKLADFGLAR-----IFGSPDRRFTHQVFARWYRAPELL-FGAKQYG 190
           +   N L+     LK++DFG++R     ++ S       Q+  +W  APE L +G  +Y 
Sbjct: 120 LAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG--MKQIPVKW-TAPEALNYG--RYS 174

Query: 191 AGVDVWAAGCIFAE 204
           +  DVW+ G +  E
Sbjct: 175 SESDVWSFGILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 66.0 bits (161), Expect = 5e-12
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 53/227 (23%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           V+G G+Y  V      KT +  A+K I+    KE VN     +I  ++  K  H+ E   
Sbjct: 2   VIGRGSYAKVLLVELKKTRRIYAMKVIK----KELVNDD--EDIDWVQTEK--HVFETAS 53

Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK---------------G 123
             P    LH  F+  E+ L  VI     F+S  D+  +MQ   K                
Sbjct: 54  NHPFLVGLHSCFQ-TESRLFFVIE----FVSGGDLMFHMQRQRKLPEEHARFYSAEISLA 108

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQV 172
           L F H++ +++RD+K +N+L+ + G +KL D+G+ +             G+P+       
Sbjct: 109 LNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPN------- 161

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPF-LQGSSD 217
               Y APE+L G + YG  VD WA G +  E++  R PF + G SD
Sbjct: 162 ----YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSD 203

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 65.3 bits (159), Expect = 6e-12
 Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G V +    +  K    VAIK ++ G  +K+  +F  L E  ++ +   P+I
Sbjct: 10  EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDF--LSEASIMGQFDHPNI 67

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + ++ EFME   L++ +R  +   +   +   ++    G+ +  +   
Sbjct: 68  IHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY 127

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH----QVFARWYRAPELLFGA 186
           +HRD+   N+L+ S+   K++DFGL+R     + D  +T     ++  RW  APE +   
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRW-TAPEAI-AY 185

Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPF 211
           +++ +  DVW+ G +  E+++   RP+
Sbjct: 186 RKFTSASDVWSYGIVMWEVMSYGERPY 212

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 65.9 bits (160), Expect = 6e-12
 Identities = 78/282 (27%), Positives = 124/282 (43%), Gaps = 52/282 (18%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           V+G G+Y  V      KT +  A+K ++    KE VN     +I  ++  K  H+ E   
Sbjct: 2   VIGRGSYAKVLLVRLKKTERIYAMKVVK----KELVNDD--EDIDWVQTEK--HVFEQAS 53

Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK---------------G 123
             P    LH  F+  E+ L  VI     +++  D+  +MQ   K                
Sbjct: 54  NHPFLVGLHSCFQ-TESRLFFVIE----YVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 108

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           L + H++ +++RD+K +N+L+ S G +KL D+G+ +    P    +       Y APE+L
Sbjct: 109 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL 168

Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
            G + YG  VD WA G +  E++  R PF + GSSD               P Q  +   
Sbjct: 169 RG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD--------------NPDQNTE--- 210

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283
             DY+ +Q +    +R +  S S  A  +L      DPK R+
Sbjct: 211 --DYL-FQVILEKQIR-IPRSLSVKAASVLKSFLNKDPKERL 248

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 65.2 bits (159), Expect = 7e-12
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 18/200 (9%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA----LREIKLLKELKSPH-- 72
            LG G +G V +A      ++ A+ K+ +   K   + +     + E+K++  L   H  
Sbjct: 42  TLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHL-GNHEN 100

Query: 73  IIELIDAFPHKGNLHLVFEF-METDLETVI-RNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           I+ L+ A    G + ++ E+    DL   + R    FL+  D+ S+     KG+AF   K
Sbjct: 101 IVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK 160

Query: 131 WVLHRDMKPNNLLIGSHGQL-KLADFGLARIFGSPDRRFTHQVFAR----WYRAPELLFG 185
             +HRD+   N+L+ +HG++ K+ DFGLAR   + D  +  +  AR    W  APE +F 
Sbjct: 161 NCIHRDLAARNVLL-THGKIVKICDFGLARDIMN-DSNYVVKGNARLPVKWM-APESIFN 217

Query: 186 AKQYGAGVDVWAAGCIFAEL 205
              Y    DVW+ G +  E+
Sbjct: 218 C-VYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 64.6 bits (157), Expect = 7e-12
 Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 7/190 (3%)

Query: 20  LGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           LG G +G V K +    K+ +TVA+K ++       +    LRE  ++++L +P+I+ +I
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
                  +  LV E  E          N  ++  +I   +     G+ +  +   +HRD+
Sbjct: 63  -GICEAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDL 121

Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N+L+ +    K++DFGL++  G+ +  +  +   +W   + APE +   K + +  D
Sbjct: 122 AARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYK-FSSKSD 180

Query: 195 VWAAGCIFAE 204
           VW+ G +  E
Sbjct: 181 VWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 65.8 bits (160), Expect = 8e-12
 Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 35/221 (15%)

Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE 61
           DL  K  D Y   +V+G G +G V       T +  A+K   K  + K+ +   F   R+
Sbjct: 37  DLRMKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 95

Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT 120
           I       SP +++L  AF     L++V E+M   DL  ++ N ++    A  + Y    
Sbjct: 96  IMAFA--NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA--RFYTAEV 151

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA------------RIFGSPDRRF 168
           +  L   H    +HRD+KP+N+L+   G LKLADFG                 G+PD   
Sbjct: 152 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD--- 208

Query: 169 THQVFARWYRAPELLF---GAKQYGAGVDVWAAGCIFAELL 206
                   Y +PE+L    G   YG   D W+ G    E+L
Sbjct: 209 --------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 64.7 bits (158), Expect = 9e-12
 Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 28/214 (13%)

Query: 18  EVLGEGTYGVVYKA----IDTKTG-QTVAIKKIRLGK-QKEGVNFTALREIKLLKEL-KS 70
           + LGEG +G V KA    +D      TVA+K ++    +K+  +   + E++++K + K 
Sbjct: 18  KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDL--VSEMEMMKMIGKH 75

Query: 71  PHIIELIDAFPHKGNLHLVFEF---------------METDLETVI-RNTNIFLSPADIK 114
            +II L+     +G L++V E+                         R     L+  D+ 
Sbjct: 76  KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLV 135

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQV 172
           S+     +G+ F   K  +HRD+   N+L+     +K+ADFGLAR     D  R+ T+  
Sbjct: 136 SFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGR 195

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
               + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 196 LPVKWMAPEALF-DRVYTHQSDVWSFGVLLWEIF 228

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 14/162 (8%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKELKS 70
           ++K + +G G +G V       T    A+K +R   +  + +  +  A R+I  L E  +
Sbjct: 3   FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDI--LAEADN 60

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADI-KSYMQMTLKGLAFCH 128
             +++L  +F  K NL+ V +++   D+ +++    IF    D+ + Y+      +   H
Sbjct: 61  EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIF--EEDLARFYIAELTCAIESVH 118

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170
           K   +HRD+KP+N+LI   G +KL DFGL   F     R+TH
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF-----RWTH 155

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 12/200 (6%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           VLG+G +G V       TG+  A KK+   R+ K+K      AL E ++L+++ S  ++ 
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG--EAMALNEKRILEKVNSRFVVS 64

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           L  A+  K  L LV   M   DL+  I N  N          Y      GL    ++ ++
Sbjct: 65  LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQVFARWYRAPELLFGAKQYGAG 192
           +RD+KP N+L+   G ++++D GLA     P+      +V    Y APE++   K Y   
Sbjct: 125 YRDLKPENILLDDRGHIRISDLGLAVQI--PEGETVRGRVGTVGYMAPEVINNEK-YTFS 181

Query: 193 VDVWAAGCIFAELLN-RRPF 211
            D W  GC+  E++  + PF
Sbjct: 182 PDWWGLGCLIYEMIQGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 31/231 (13%)

Query: 9   KVADRYLKREVLGEGTYGVV-----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK 63
           K  D  LKRE LGEG +G V     Y    TK    VA+K ++        +F   RE +
Sbjct: 3   KRRDIVLKRE-LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ--REAE 59

Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR----NTNIFLSPADIKSYMQ 118
           LL  L+  HI++          L +VFE+M+  DL   +R    +  I +     ++  +
Sbjct: 60  LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 119

Query: 119 MTLK-----------GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           + L            G+ +   +  +HRD+   N L+G++  +K+ DFG++R   S D  
Sbjct: 120 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 179

Query: 166 RRFTHQVFA-RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQ 213
           R   H +   RW     +++  +++    DVW+ G I  E+    ++P+ Q
Sbjct: 180 RVGGHTMLPIRWMPPESIMY--RKFTTESDVWSFGVILWEIFTYGKQPWFQ 228

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 64.2 bits (156), Expect = 1e-11
 Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 11/200 (5%)

Query: 20  LGEGTYGVVYKAI-DTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           LG G +G V K +   +  Q  VAIK ++   +K  V    +RE +++ +L +P+I+ +I
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEK-SVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 78  DAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                   L LV E      L   +      ++ +++   M     G+ +   K  +HRD
Sbjct: 62  -GVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRD 120

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGV 193
           +   N+L+ +    K++DFGL++  G+ D  +  +   +W   + APE +   K + +  
Sbjct: 121 LAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRK-FSSRS 179

Query: 194 DVWAAGCIFAELLN--RRPF 211
           DVW+ G    E  +  ++P+
Sbjct: 180 DVWSYGITMWEAFSYGQKPY 199

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 64.3 bits (156), Expect = 1e-11
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 28/262 (10%)

Query: 20  LGEGTYGVVYKAI-----DTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           LG+G++G+VY+ I       +    VAIK +      +E + F  L E  ++KE    H+
Sbjct: 14  LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEFNCHHV 71

Query: 74  IELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT---LKG 123
           + L+          ++ E M   DL++ +R+       N   +P  +K  +QM      G
Sbjct: 72  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-ARWYRAP 180
           +A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   RW    
Sbjct: 132 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
            L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P   PD
Sbjct: 192 SLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGMSNEQVLRFVMEGGLLDKPDNCPD 248

Query: 239 LAYLPDYVEYQYVAAPPLRSLF 260
           + +    + +QY   P +R  F
Sbjct: 249 MLFELMRMCWQY--NPKMRPSF 268

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 64.2 bits (156), Expect = 2e-11
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 46/256 (17%)

Query: 13  RYLKREVLGEGTYGVVYKA--------------IDTKTGQT--VAIKKIRLGKQKEGVNF 56
             L +E LGEG +G V+                 + + G+   VA+K +R    K   N 
Sbjct: 6   HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARN- 64

Query: 57  TALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET----------DLETVIRNTNI 106
             L+E+K+L  LK P+II L+     +  L ++ E+ME            L+    N N 
Sbjct: 65  DFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGND 124

Query: 107 FLSPA------DIKSYMQMTLK---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157
            + PA         S + + L+   G+ +      +HRD+   N L+G +  +K+ADFG+
Sbjct: 125 AVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGM 184

Query: 158 ARIFGSPD--RRFTHQVFA-RWYRAPELLFGAKQYGAGVDVWAAGCIFAELL---NRRPF 211
           +R   + D  R     V   RW     +L G  ++    DVWA G    E+L     +P+
Sbjct: 185 SRNLYAGDYYRIQGRAVLPIRWMAWECILMG--KFTTASDVWAFGVTLWEILMLCKEQPY 242

Query: 212 LQGSSD--IDQLGKIF 225
            + + +  I+  G+ F
Sbjct: 243 GELTDEQVIENAGEFF 258

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 64.2 bits (156), Expect = 2e-11
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 10/198 (5%)

Query: 18  EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELK-SP 71
           +VLG G YG V+   K     +G+  A+K ++     QK         E ++L+ ++ SP
Sbjct: 6   KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 65

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            ++ L  AF     LHL+ +++   +L T +     F    +++ Y    +  L   HK 
Sbjct: 66  FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERF-KEQEVQIYSGEIVLALEHLHKL 124

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQ- 188
            +++RD+K  N+L+ S+G + L DFGL++ F   +    +       Y AP+++ G    
Sbjct: 125 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGG 184

Query: 189 YGAGVDVWAAGCIFAELL 206
           +   VD W+ G +  ELL
Sbjct: 185 HDKAVDWWSMGVLMYELL 202

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 63.9 bits (155), Expect = 2e-11
 Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 26/271 (9%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           V+G G+Y  V      K  Q  A+K ++  L    E +++    +    +   +P ++ L
Sbjct: 2   VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGL 61

Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
              F     L LV E++              L     + Y       L F H++ +++RD
Sbjct: 62  HSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRD 121

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +K +N+L+ + G +KL D+G+ +    P    +       Y APE+L G ++YG  VD W
Sbjct: 122 LKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG-EEYGFSVDWW 180

Query: 197 AAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           A G +  E++  R PF     DI               +  PD+    DY+ +Q +   P
Sbjct: 181 ALGVLMFEMMAGRSPF-----DI--------------ITDNPDMN-TEDYL-FQVILEKP 219

Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
           +R +    S  A  +L      DPK R+  Q
Sbjct: 220 IR-IPRFLSVKASHVLKGFLNKDPKERLGCQ 249

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 62.8 bits (153), Expect = 3e-11
 Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 24/238 (10%)

Query: 15  LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           L R+ LG G +G V++ +   T   VA+K ++ G      +F  L E +++K+L+ P +I
Sbjct: 10  LLRK-LGAGQFGEVWEGLWNNT-TPVAVKTLKPGTMDPK-DF--LAEAQIMKKLRHPKLI 64

Query: 75  ELIDAFPHKGNLHLVFEFM--ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           +L      +  +++V E M   + LE +       L    +         G+A+   +  
Sbjct: 65  QLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY 124

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL----FG 185
           +HRD+   N+L+G +   K+ADFGLAR+       +  +  A++   + APE      F 
Sbjct: 125 IHRDLAARNVLVGENNICKVADFGLARVIKEDI--YEAREGAKFPIKWTAPEAALYNRFS 182

Query: 186 AKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
            K      DVW+ G +  E++   R P+  G ++ + L ++   +    P   P   Y
Sbjct: 183 IKS-----DVWSFGILLTEIVTYGRMPY-PGMTNAEVLQQVDQGYRMPCPPGCPKELY 234

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 64.1 bits (156), Expect = 4e-11
 Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 9/143 (6%)

Query: 23  GTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL----LKELKSPHIIELID 78
           G +G VY        +  A+K +   K+ + +N   + +++     L   KSP I+ L  
Sbjct: 15  GAFGKVYLGRKKNNSKLYAVKVV---KKADMINKNMVHQVQAERDALALSKSPFIVHLYY 71

Query: 79  AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           +     N++LV E++   D+++++     F     +K   ++ L  L + H+  ++HRD+
Sbjct: 72  SLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVAL-ALDYLHRHGIIHRDL 130

Query: 138 KPNNLLIGSHGQLKLADFGLARI 160
           KP+N+LI + G +KL DFGL+++
Sbjct: 131 KPDNMLISNEGHIKLTDFGLSKV 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 63.2 bits (153), Expect = 4e-11
 Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 13/201 (6%)

Query: 15  LKR-EVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG--VNFTALREIKLLKELKS 70
           LKR +VLG G +G VYK I    G+TV I   I++  +  G   N   + E  ++  +  
Sbjct: 9   LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 68

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           PH++ L+        + LV + M     L+ V  + +   S   +   +Q+  KG+ +  
Sbjct: 69  PHLVRLL-GVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIA-KGMMYLE 126

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFG 185
           ++ ++HRD+   N+L+ S   +K+ DFGLAR+    ++ +     ++  +W     + + 
Sbjct: 127 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY- 185

Query: 186 AKQYGAGVDVWAAGCIFAELL 206
            +++    DVW+ G    EL+
Sbjct: 186 -RKFTHQSDVWSYGVTIWELM 205

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 62.5 bits (152), Expect = 5e-11
 Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 15/202 (7%)

Query: 18  EVLGEGTYGVVYKA--IDT-KTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
            V+G+G +G VY    ID+       A+K + R+   +E   F  L+E  ++K+   P++
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQF--LKEGIIMKDFSHPNV 58

Query: 74  IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+    P +G+  +V  +M+  DL   IR+     +  D+  +     KG+ +   K 
Sbjct: 59  LSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK 118

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR      + S       ++  +W  A E L   
Sbjct: 119 FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWM-ALESL-QT 176

Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 177 QKFTTKSDVWSFGVLLWELMTR 198

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 62.3 bits (151), Expect = 7e-11
 Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 22/209 (10%)

Query: 18  EVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+GEG +G V +A+  K G     AIK ++    + +  +F    E+ L K    P+II
Sbjct: 8   DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEV-LCKLGHHPNII 66

Query: 75  ELIDAFPHKGNLHLVFEF---------------METDLETVIRN-TNIFLSPADIKSYMQ 118
            L+ A  ++G L++  E+               +ETD      + T   L+   +  +  
Sbjct: 67  NLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFAS 126

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
               G+ +  +K  +HRD+   N+L+G +   K+ADFGL+R      ++   ++  RW  
Sbjct: 127 DVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMA 186

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN 207
              L +    Y    DVW+ G +  E+++
Sbjct: 187 IESLNYSV--YTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 62.0 bits (151), Expect = 9e-11
 Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 36/205 (17%)

Query: 26  GVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKELKSPHIIELIDAFPHKG 84
            +V+ A    T   VA+KKI L    +  +   L +EI   ++L+ P+I+  + +F    
Sbjct: 14  MIVHLAKHKPTNTLVAVKKINLDSCSKE-DLKLLQQEIITSRQLQHPNILPYVTSFIVDS 72

Query: 85  NLHLVFEFME----TDL----------ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            L++V   M      DL          E  I               ++  L  L + H K
Sbjct: 73  ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFI------------LKDVLNALDYIHSK 120

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT-------HQVFARWYRAPELL 183
             +HR +K +++L+   G++ L+    +       +R           V    + +PE+L
Sbjct: 121 GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVL 180

Query: 184 FGAKQ-YGAGVDVWAAGCIFAELLN 207
               Q Y    D+++ G    EL N
Sbjct: 181 QQNLQGYNEKSDIYSVGITACELAN 205

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 62.0 bits (150), Expect = 1e-10
 Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 64/300 (21%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           ++LG+GT+G V    +  TG+  A+K  K  +   K+ V  T L E ++L+  + P +  
Sbjct: 1   KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHPFLTA 59

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-KKWVL 133
           L  +F     L  V E+    +L   +    +F S    + Y    +  L + H +K V+
Sbjct: 60  LKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSEKNVV 118

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPEL 182
           +RD+K  NL++   G +K+ DFGL +             G+P+           Y APE+
Sbjct: 119 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE-----------YLAPEV 167

Query: 183 LFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L     YG  VD W  G +  E++  R PF     +     K+F                
Sbjct: 168 L-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLF---------------- 205

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
             + +  + +  P  R+L P A      LLS +   DPK R+      A++ ++H++F+ 
Sbjct: 206 --ELILMEEIRFP--RTLSPEAK----SLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG 257

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 61.5 bits (149), Expect = 1e-10
 Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 15/204 (7%)

Query: 19  VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHII 74
           V+G G +G V      +  K    VAIK ++ G  +K+  +F  L E  ++ +   P+II
Sbjct: 11  VIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDF--LSEASIMGQFDHPNII 68

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L         + +V E+ME   L+  +R  +   +   +   ++    G+ +      +
Sbjct: 69  HLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYV 128

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQY 189
           HRD+   N+L+ S+   K++DFGL+R+    P+  +T    ++  RW  APE +   +++
Sbjct: 129 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TAPEAI-AYRKF 186

Query: 190 GAGVDVWAAGCIFAELLN--RRPF 211
            +  DVW+ G +  E+++   RP+
Sbjct: 187 TSASDVWSYGIVMWEVMSYGERPY 210

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 61.9 bits (150), Expect = 1e-10
 Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 14/193 (7%)

Query: 20  LGEGTYG-VVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           LG G++G V+      +    VAIK   K ++ KQK+  +     E K+L  +  P  + 
Sbjct: 38  LGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDH--VFSERKILNYINHPFCVN 95

Query: 76  LIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKS-YMQMTLKGLAFCHKKWVL 133
           L  +F  +  L+LV EF +  +  T +R    F  P D+   Y    +    +     ++
Sbjct: 96  LYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRF--PNDVGCFYAAQIVLIFEYLQSLNIV 153

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP NLL+   G +K+ DFG A++    D R         Y APE+L     +G   
Sbjct: 154 YRDLKPENLLLDKDGFIKMTDFGFAKVV---DTRTYTLCGTPEYIAPEILLNVG-HGKAA 209

Query: 194 DVWAAGCIFAELL 206
           D W  G    E+L
Sbjct: 210 DWWTLGIFIYEIL 222

Length = 340

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 12/199 (6%)

Query: 16  KREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK I    G+     VAIK +R     +  N   L E  ++  + SP
Sbjct: 11  KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA-NKEILDEAYVMAGVGSP 69

Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           ++  L+        + LV + M    L   +R     +   D+ ++     KG+++  + 
Sbjct: 70  YVCRLL-GICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV 128

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFGAK 187
            ++HRD+   N+L+ S   +K+ DFGLAR+    +  +     +V  +W     +L   +
Sbjct: 129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL--HR 186

Query: 188 QYGAGVDVWAAGCIFAELL 206
           ++    DVW+ G    EL+
Sbjct: 187 RFTHQSDVWSYGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 15/189 (7%)

Query: 20  LGEGTYGVVYKAI-DTKTGQ--TVAIKKIRLGKQKEGVNFTA--LREIKLLKELKSPHII 74
           LG G +G V K +   K+G+   VA+K +   KQ+         LRE  ++ +L  P I+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTL---KQEHIAAGKKEFLREASVMAQLDHPCIV 59

Query: 75  ELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            LI     +  L LV E      L   ++        +D+K        G+A+   K  +
Sbjct: 60  RLIGVCKGEP-LMLVMELAPLGPLLKYLKKRREI-PVSDLKELAHQVAMGMAYLESKHFV 117

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYG 190
           HRD+   N+L+ +  Q K++DFG++R  G+    +      RW   + APE +   K + 
Sbjct: 118 HRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGK-FS 176

Query: 191 AGVDVWAAG 199
           +  DVW+ G
Sbjct: 177 SKSDVWSYG 185

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 61.9 bits (150), Expect = 1e-10
 Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 16/171 (9%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK---QKEGVNFTALREIKLLKELKS 70
           ++K + LG G +G V  A    T    A+K +R      + +  +  A R+I  L E  +
Sbjct: 3   FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDI--LAEADN 60

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADI-KSYMQMTLKGLAFCH 128
             ++ L  +F  K NL+ V +++   D+ +++    IF  P D+ + Y+      +   H
Sbjct: 61  EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIF--PEDLARFYIAELTCAVESVH 118

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
           K   +HRD+KP+N+LI   G +KL DFGL   F     R+TH   +++Y++
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF-----RWTHD--SKYYQS 162

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 33/216 (15%)

Query: 20  LGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +G+G +G V++A     +  +    VA+K ++     + +     RE  L+ E   P+I+
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD-MQADFQREAALMAEFDHPNIV 71

Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIF----------------LSPADIKSYM 117
           +L+        + L+FE+M   DL   +R+ +                  L+P  +    
Sbjct: 72  KLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTE 131

Query: 118 QMTLK-----GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172
           Q+ +      G+A+  ++  +HRD+   N L+G +  +K+ADFGL+R   S D     + 
Sbjct: 132 QLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASEN 191

Query: 173 FA---RWYRAPELLFGAKQYGAGVDVWAAGCIFAEL 205
            A   RW   PE +F  + Y    DVWA G +  E+
Sbjct: 192 DAIPIRWM-PPESIFYNR-YTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 61.0 bits (148), Expect = 1e-10
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 21/204 (10%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LG G +G V+          VAIK ++ G          L E  L+K+L+ P ++ L 
Sbjct: 12  KKLGAGQFGEVWMGY-YNGHTKVAIKSLKQGSMSPE---AFLAEANLMKQLQHPRLVRL- 66

Query: 78  DAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
            A   +  ++++ E+ME    ++ +     I L+   +        +G+AF  +K  +HR
Sbjct: 67  YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHR 126

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGA- 191
           D++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE    A  YG  
Sbjct: 127 DLRAANILVSETLCCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----AINYGTF 180

Query: 192 --GVDVWAAGCIFAELLN--RRPF 211
               DVW+ G +  E++   R P+
Sbjct: 181 TIKSDVWSFGILLTEIVTYGRIPY 204

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 26/209 (12%)

Query: 20  LGEGTYGVVYK--AID---TKTG-QTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPH 72
           LG G +G VY+  A D     +G   VA+K +R G   +E   F  L+E  L+     P+
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEF--LKEAHLMSNFNHPN 60

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI--FLSPA-DIKSYMQMTL---KGLA 125
           I++L+         +++ E ME  DL + +R+  +  F  P   +K  + + L   KG  
Sbjct: 61  IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ-----LKLADFGLARIFGSPD---RRFTHQVFARWY 177
           +  +   +HRD+   N L+   G      +K+ DFGLAR     D   +     +  RW 
Sbjct: 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWM 180

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L   K +    DVW+ G +  E+L
Sbjct: 181 -APESLLDGK-FTTQSDVWSFGVLMWEIL 207

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 38/204 (18%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL--- 76
           LG G +G V+      T + VA+K ++ G       F  L+E +++K+L+   +++L   
Sbjct: 14  LGAGQFGEVWMGTWNGTTK-VAVKTLKPGTMSPE-AF--LQEAQIMKKLRHDKLVQLYAV 69

Query: 77  ---------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
                    +  +  KG+L    +F+++     +R   +    A I         G+A+ 
Sbjct: 70  CSEEEPIYIVTEYMSKGSL---LDFLKSGEGKKLRLPQLVDMAAQIAE-------GMAYL 119

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLF 184
             +  +HRD+   N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE   
Sbjct: 120 ESRNYIHRDLAARNILVGENLVCKIADFGLARLI--EDDEYTAREGAKFPIKWTAPE--- 174

Query: 185 GAKQYGA---GVDVWAAGCIFAEL 205
            A  YG      DVW+ G +  E+
Sbjct: 175 -AANYGRFTIKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 60.9 bits (147), Expect = 2e-10
 Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 22/209 (10%)

Query: 18  EVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+GEG +G V KA   K G     AIK+++    + +  +F    E+ L K    P+II
Sbjct: 1   DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNII 59

Query: 75  ELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF---------------LSPADIKSYMQ 118
            L+ A  H+G L+L  E+    +L   +R + +                LS   +  +  
Sbjct: 60  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 119

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
              +G+ +  +K  +HRD+   N+L+G +   K+ADFGL+R      ++   ++  RW  
Sbjct: 120 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 179

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN 207
              L +    Y    DVW+ G +  E+++
Sbjct: 180 IESLNYSV--YTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 60.5 bits (146), Expect = 2e-10
 Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 18/202 (8%)

Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ +V LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 8   LRLDVKLGQGCFGEVW--MGTWNGTTKVAIKTLKPGTMMPE---AFLQEAQIMKKLRHDK 62

Query: 73  IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           ++ L  A   +  +++V EFM     L+ +      +L    +         G+A+  + 
Sbjct: 63  LVPLY-AVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM 121

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 122 NYIHRDLRAANILVGDNLVCKIADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 178

Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
            ++    DVW+ G +  EL+ +
Sbjct: 179 -RFTIKSDVWSFGILLTELVTK 199

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 20/172 (11%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK----LLKELK 69
           ++K + LG G +G V  A    T    A+K +R   +K+ +N   +  +K    +L E  
Sbjct: 3   FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLR---KKDVLNRNQVAHVKAERDILAEAD 59

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSY--MQMTLKGLAF 126
           +  +++L  +F  K NL+ V +++   D+ +++    +F  P  +  +   ++TL  +  
Sbjct: 60  NEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVF--PEVLARFYIAELTL-AIES 116

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
            HK   +HRD+KP+N+LI   G +KL DFGL   F     R+TH   +++Y+
Sbjct: 117 VHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGF-----RWTHN--SKYYQ 161

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 21/198 (10%)

Query: 15  LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
                +G+G +G V        GQ VA+K ++         F  L E  ++  L+ P+++
Sbjct: 9   KLGATIGKGEFGDVMLG--DYRGQKVAVKCLK-DDSTAAQAF--LAEASVMTTLRHPNLV 63

Query: 75  ELIDAFPHKGNLHLVFEFMETD-----LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           +L+        L++V E+M        L +  R        A    +     +G+ +  +
Sbjct: 64  QLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITL---AQQLGFALDVCEGMEYLEE 120

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV--FARWYRAPELLFGAK 187
           K  +HRD+   N+L+      K++DFGLA+     +             + APE L   K
Sbjct: 121 KNFVHRDLAARNVLVSEDLVAKVSDFGLAK-----EASQGQDSGKLPVKWTAPEAL-REK 174

Query: 188 QYGAGVDVWAAGCIFAEL 205
           ++    DVW+ G +  E+
Sbjct: 175 KFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 59.2 bits (143), Expect = 5e-10
 Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 17/196 (8%)

Query: 20  LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG G +G V+    T  G T VA+K ++ G        + L E +++K+L+   +++L  
Sbjct: 14  LGNGQFGEVWMG--TWNGNTKVAVKTLKPGTMSPE---SFLEEAQIMKKLRHDKLVQLY- 67

Query: 79  AFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
           A   +  +++V E+M     L+ +       L   ++         G+A+  +   +HRD
Sbjct: 68  AVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 127

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGAKQYGAG 192
           ++  N+L+G     K+ADFGLAR+    D  +T +  A++   + APE  L+G  ++   
Sbjct: 128 LRSANILVGDGLVCKIADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG--RFTIK 183

Query: 193 VDVWAAGCIFAELLNR 208
            DVW+ G +  EL+ +
Sbjct: 184 SDVWSFGILLTELVTK 199

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 59.8 bits (145), Expect = 6e-10
 Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 35/228 (15%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+G G +G V       TGQ  A+K   K  + K+ E   F   R++  L       I 
Sbjct: 7   KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDV--LVNGDRRWIT 64

Query: 75  ELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L  AF  + NL+LV ++ +  DL T++      L     + Y+   +  +   H+   +
Sbjct: 65  NLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYV 124

Query: 134 HRDMKPNNLLIGSHGQLKLADFG-LARI-----------FGSPDRRFTHQVFARWYRAPE 181
           HRD+KP+N+L+  +G ++LADFG   R+            G+PD           Y +PE
Sbjct: 125 HRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPD-----------YISPE 173

Query: 182 LLF----GAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKI 224
           +L     G  +YG   D W+ G C++  L    PF    S ++  GKI
Sbjct: 174 ILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKI 220

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 59.3 bits (143), Expect = 8e-10
 Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+G G +G V         +  A+K   K  + K+ E   F   R++  L    +  I 
Sbjct: 7   KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV--LVNGDNQWIT 64

Query: 75  ELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L  AF  + NL+LV ++ +  DL T++      L     + Y+   +  +   H+   +
Sbjct: 65  TLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV 124

Query: 134 HRDMKPNNLLIGSHGQLKLADFG------------LARIFGSPDRRFTHQVFARWYRAPE 181
           HRD+KP+N+L+  +G ++LADFG             +   G+PD           Y +PE
Sbjct: 125 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD-----------YISPE 173

Query: 182 LLF----GAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIF 225
           +L     G  +YG   D W+ G C++  L    PF    S ++  GKI 
Sbjct: 174 ILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIM 221

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 30/233 (12%)

Query: 9   KVADRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIK 63
           K  D  LK E LGEG +G V+ A     +  +    VA+K ++   +    +F   RE +
Sbjct: 3   KRRDIVLKWE-LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAE 59

Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNI---FLSPADIKSYMQM 119
           LL  L+  HI+           L +VFE+M   DL   +R+       L+  +  +  Q+
Sbjct: 60  LLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQL 119

Query: 120 TL-----------KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRR 167
           TL            G+ +      +HRD+   N L+G    +K+ DFG++R I+ +   R
Sbjct: 120 TLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 179

Query: 168 FTHQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
              +     RW     +L+  +++    D+W+ G +  E+    ++P+ Q S+
Sbjct: 180 VGGRTMLPIRWMPPESILY--RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 58.5 bits (141), Expect = 1e-09
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 23/203 (11%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +G V+ A   K  + VA+K ++ G          L E  ++K L+   +++L  A
Sbjct: 14  LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKL-HA 68

Query: 80  FPHKGNLHLVFEFMET-DLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
              K  ++++ EFM    L   +++   +    P  I    Q+  +G+AF  ++  +HRD
Sbjct: 69  VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA-EGMAFIEQRNYIHRD 127

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGV 193
           ++  N+L+ +    K+ADFGLAR+    D  +T +  A++   + APE    A  +G+  
Sbjct: 128 LRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPE----AINFGSFT 181

Query: 194 ---DVWAAGCIFAELLN--RRPF 211
              DVW+ G +  E++   R P+
Sbjct: 182 IKSDVWSFGILLMEIVTYGRIPY 204

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 14/202 (6%)

Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + K +VLG G +G VYK +    G+     VAIK++R     +  N   L E  ++  + 
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMASVD 67

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +PH+  L+        + L+ + M     L+ V  + +   S   +   +Q+  KG+ + 
Sbjct: 68  NPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-KGMNYL 125

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLF 184
            ++ ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +     +V  +W     +L 
Sbjct: 126 EERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESIL- 184

Query: 185 GAKQYGAGVDVWAAGCIFAELL 206
             + Y    DVW+ G    EL+
Sbjct: 185 -HRIYTHQSDVWSYGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 58.5 bits (141), Expect = 1e-09
 Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 29/215 (13%)

Query: 18  EVLGEGTYGVVYKA----IDTKTGQTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPH 72
           E LGE  +G +YK           Q VAIK ++ +   ++   F   +E  L+ EL  P+
Sbjct: 11  EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQ--QEASLMAELHHPN 68

Query: 73  IIELIDAFPHKGNLHLVFEFM-ETDLET--VIRNTN-----------IFLSPADIKSYMQ 118
           I+ L+     +  + ++FE++ + DL    ++R+ +              S  D   ++ 
Sbjct: 69  IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128

Query: 119 MTLK---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVF- 173
           + ++   G+ +    + +H+D+   N+LIG    +K++D GL+R I+ +   R   +   
Sbjct: 129 IAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLL 188

Query: 174 -ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
             RW     +++G  ++ +  D+W+ G +  E+ +
Sbjct: 189 PIRWMPPEAIMYG--KFSSDSDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 67/257 (26%), Positives = 98/257 (38%), Gaps = 54/257 (21%)

Query: 17  REVLGEGTYGVVY-------KAIDTKTGQT---------VAIKKIRLGKQKEGVN-FTAL 59
            E LGEG +G V+       +    K             VA+K +R          F  L
Sbjct: 10  VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDF--L 67

Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLS--------- 109
           +E+K+L  L  P+I  L+        L ++ E+ME  DL       N FL          
Sbjct: 68  KEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDL-------NQFLQKHVAETSGL 120

Query: 110 PADIKSYMQMTLK--------GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161
             + KS    TL         G+ +      +HRD+   N L+G +  +K+ADFG++R  
Sbjct: 121 ACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNL 180

Query: 162 GSPD--RRFTHQVFA-RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN---RRPFLQGS 215
            S D  R         RW  A E +   K +    DVWA G    E+L     +P+   +
Sbjct: 181 YSSDYYRVQGRAPLPIRWM-AWESVLLGK-FTTKSDVWAFGVTLWEILTLCREQPYEHLT 238

Query: 216 SD--IDQLGKIFAAFGT 230
               I+  G  F   G 
Sbjct: 239 DQQVIENAGHFFRDDGR 255

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 16/220 (7%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +K+ A +Y    VLG G  G V  A     G+  A+K + +    E     A  E+  L 
Sbjct: 27  AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLL 86

Query: 67  ELKSPHIIELIDAFPHKGN--------LHLVFEFMET-DLETVIRN---TNIFLSPADIK 114
                 I++  + F  K          + LV ++    DL   I++   TN      +  
Sbjct: 87  NCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAG 146

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF- 173
                 L  +   H K ++HRD+K  N+L+ S+G +KL DFG ++++ +       + F 
Sbjct: 147 LLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFC 206

Query: 174 -ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPF 211
              +Y APE ++  K Y    D+++ G +  ELL  +RPF
Sbjct: 207 GTPYYVAPE-IWRRKPYSKKADMFSLGVLLYELLTLKRPF 245

Length = 496

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 36/229 (15%)

Query: 15  LKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTA----LREIKLL 65
           LKRE LGEG +G V+             + VA+K +     KE  +  A     RE +LL
Sbjct: 9   LKRE-LGEGAFGKVFLGECYHLEPENDKELVAVKTL-----KETASNDARKDFEREAELL 62

Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIR----NTNIFLSPAD------IK 114
              +  +I++            +VFE+ME  DL   +R    +     SP        + 
Sbjct: 63  TNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122

Query: 115 SYMQMTLK---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFT 169
             +Q+ ++   G+ +   +  +HRD+   N L+G    +K+ DFG++R   + D  R   
Sbjct: 123 QLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGG 182

Query: 170 HQVFA-RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGS 215
           H +   RW     +++   ++    DVW+ G +  E+    ++P+   S
Sbjct: 183 HTMLPIRWMPPESIMYR--KFTTESDVWSFGVVLWEIFTYGKQPWYGLS 229

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 59.0 bits (143), Expect = 3e-09
 Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 54/241 (22%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
           RY    ++G+G  G VY A D    + VA+KKIR    +   +    LRE K+  +L  P
Sbjct: 3   RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHP 62

Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLK----- 122
            I+ +         ++    ++E   L++++++             K+ +   L      
Sbjct: 63  GIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKI 122

Query: 123 --GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA---------------------- 158
              + + H K VLHRD+KP+N+L+G  G++ + D+G A                      
Sbjct: 123 CATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICY 182

Query: 159 -------RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRP 210
                  +I G+PD           Y APE L G        D++A G I  ++L    P
Sbjct: 183 SSMTIPGKIVGTPD-----------YMAPERLLGVPA-SESTDIYALGVILYQMLTLSFP 230

Query: 211 F 211
           +
Sbjct: 231 Y 231

Length = 932

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)

Query: 18  EVLGEGTYGVVYKAI-DTKTGQT--VAIKKIRLGKQKEGV-NFTALREIKLLKELKSPHI 73
           + LG+G++GVV +    T  G+   VA+K ++  K  + + +F  L+E  ++  L   ++
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDF--LKEAAIMHSLDHENL 58

Query: 74  IEL---IDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           I L   +   P    L +V E     + L+ + ++       + +  Y      G+ +  
Sbjct: 59  IRLYGVVLTHP----LMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE 114

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV-----FARWYRAPELL 183
            K  +HRD+   N+L+ S  ++K+ DFGL R     +  +  +      FA W  APE L
Sbjct: 115 SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFA-WC-APESL 172

Query: 184 FGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKI 224
              + +    DVW  G    E+      P+  G S    L KI
Sbjct: 173 -RTRTFSHASDVWMFGVTLWEMFTYGEEPWA-GLSGSQILKKI 213

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 30/214 (14%)

Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 23  LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 81

Query: 72  HIIELIDAFPHKGNLHLVFEF-----------------METDLETVIRNTNIFLSPADIK 114
           +II L+ A    G L+++ E+                 ME   + + R  +  ++  D+ 
Sbjct: 82  NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-IARVPDEQMTFKDLV 140

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQV 172
           S      +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+  
Sbjct: 141 SCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGR 200

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
               + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 201 LPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 233

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 37/229 (16%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+G G +G V       T +  A+K   K  + K+ E   F   R +  L       I 
Sbjct: 7   KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNV--LVNGDCQWIT 64

Query: 75  ELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADI-KSYMQMTLKGLAFCHKKWV 132
            L  AF  +  L+LV ++ +  DL T++      L P D+ + Y+   +  +   H+   
Sbjct: 65  TLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRL-PEDMARFYIAEMVLAIHSIHQLHY 123

Query: 133 LHRDMKPNNLLIGSHGQLKLADFG------------LARIFGSPDRRFTHQVFARWYRAP 180
           +HRD+KP+N+L+  +G ++LADFG             +   G+PD           Y +P
Sbjct: 124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPD-----------YISP 172

Query: 181 ELLF----GAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKI 224
           E+L     G  +YG   D W+ G C++  L    PF    S ++  GKI
Sbjct: 173 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKI 220

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 56.7 bits (137), Expect = 4e-09
 Identities = 66/290 (22%), Positives = 109/290 (37%), Gaps = 64/290 (22%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHI 73
             +GEG +G VY+ +          VA+K  +          F  L+E  ++++   PHI
Sbjct: 12  RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKF--LQEAYIMRQFDHPHI 69

Query: 74  IELIDA-----------FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           ++LI                 G L     +++ +  +        L  A +  Y      
Sbjct: 70  VKLIGVITENPVWIVMELAPLGELR---SYLQVNKYS--------LDLASLILYSYQLST 118

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA---RWYRA 179
            LA+   K  +HRD+   N+L+ S   +KL DFGL+R     +  +         +W  A
Sbjct: 119 ALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL-EDESYYKASKGKLPIKWM-A 176

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           PE +   +++ +  DVW  G    E+L    +PF QG  + D +G+I        P   P
Sbjct: 177 PESI-NFRRFTSASDVWMFGVCMWEILMLGVKPF-QGVKNNDVIGRIENGERLPMPPNCP 234

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
                           P L S           L++K + YDP  R    +
Sbjct: 235 ----------------PTLYS-----------LMTKCWAYDPSKRPRFTE 257

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 56.6 bits (136), Expect = 4e-09
 Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 21/232 (9%)

Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +G V+      + + VA+K ++ G          L E  L+K L+   ++ L   
Sbjct: 14  LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAV 69

Query: 80  FPHKGNLHLVFEFMET----DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              +  ++++ E+M      D         + L P  I    Q+  +G+A+  +K  +HR
Sbjct: 70  VTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIA-EGMAYIERKNYIHR 127

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGA 191
           D++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE + FG+  +  
Sbjct: 128 DLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGS--FTI 183

Query: 192 GVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             DVW+ G +  E++   + P+  G S+ D +  +   +        PD  Y
Sbjct: 184 KSDVWSFGILLYEIVTYGKIPY-PGMSNSDVMSALQRGYRMPRMENCPDELY 234

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 56.7 bits (137), Expect = 5e-09
 Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 43/235 (18%)

Query: 12  DRYLKREVLGEGTYGVVYKAI--DTKTG--QTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           DR    ++L EGT+G ++  I  D K G  + V +K ++    +  V    L+E  LL  
Sbjct: 6   DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLL-LQESCLLYG 64

Query: 68  LKSPHI-------IELID------AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK 114
           L   +I       IE  +       + + GNL L   F+         N    LS   + 
Sbjct: 65  LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKL---FL-QQCRLGEANNPQALSTQQLV 120

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IF-------GSPDR 166
                   G+++ HK+ V+H+D+   N +I    Q+K+ D  L+R +F       G  + 
Sbjct: 121 HMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNEN 180

Query: 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDID 219
           R       +W  A E L   K+Y +  DVW+ G +  EL  L + P++    +ID
Sbjct: 181 RPV-----KWM-ALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYV----EID 224

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 56.6 bits (136), Expect = 5e-09
 Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 28/221 (12%)

Query: 12  DRYLKREVLGEGTYGVVYKA----IDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G V  A    +D +       VA+K ++    ++ ++   + E+++
Sbjct: 18  DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 76

Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   +R                    
Sbjct: 77  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136

Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 196

Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 197 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 236

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 77/342 (22%), Positives = 123/342 (35%), Gaps = 77/342 (22%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           ++LG+G  G V+      TG+  A+K   K  + K+ +       +EI  L  L  P + 
Sbjct: 7   KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEI--LATLDHPFLP 64

Query: 75  ELIDAFPHKGNLHLVFEF-METDLETVI--RNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
            L  +F  +  L LV ++    +L  ++  +      S    + Y    L  L + H   
Sbjct: 65  TLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCL-SEEVARFYAAEVLLALEYLHLLG 123

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGL-------------ARIFGSPDRRFTHQVFARW-- 176
           +++RD+KP N+L+   G + L+DF L             A   GS            +  
Sbjct: 124 IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSE 183

Query: 177 --------------YRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQL 221
                         Y APE++ G   +G+ VD W  G +  E+L    PF +GS+  +  
Sbjct: 184 EPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPF-KGSNRDETF 241

Query: 222 GKIFAAFGTAT-PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPK 280
             I       T P   P                          S  A DL+ K+   DP 
Sbjct: 242 SNILK--KEVTFPGSPPV-------------------------SSSARDLIRKLLVKDPS 274

Query: 281 ARI----TAQQALEHRYFSSAPLP----TEPNKLPRPATKRA 314
            R+     A +  +H +F          T P  +PRP     
Sbjct: 275 KRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRPDDGID 316

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 56.1 bits (135), Expect = 2e-08
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)

Query: 51  KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSP 110
           K G   +++ E +LL+ L  P ++ L+D     G   LV     +DL T +      L  
Sbjct: 200 KAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGL 259

Query: 111 ADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFT 169
           A + +  +  L  + + H + ++HRD+K  N+L+     + L DFG A    GS    F 
Sbjct: 260 AQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319

Query: 170 HQVFARW-YRAPELLFGAKQYGAGVDVWAAGCIFAE 204
           + +       APE+L G   Y   VD+W+AG +  E
Sbjct: 320 YGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFE 354

Length = 461

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 25/223 (11%)

Query: 15  LKREVLGEGTYGVVYKAI--DTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+    D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 10  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 66

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 67  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 126

Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
           +   G+A+ + K  +HRD+   N ++     +K+ DFG+ R     D  R+    +    
Sbjct: 127 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSD 217
           + APE L     +    D+W+ G +  E+  L  +P+ QG S+
Sbjct: 187 WMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPY-QGLSN 227

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 20/208 (9%)

Query: 19  VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           +LG+G +G V +A    +  + Q VA+K ++            LRE   +KE   P++I+
Sbjct: 6   MLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIK 65

Query: 76  LIDAFPH---KGNL---HLVFEFME-TDLETVIRNTNIFLSPADIK-----SYMQMTLKG 123
           LI        KG L    ++  FM+  DL T +  + I   P  +       +M     G
Sbjct: 66  LIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---RRFTHQVFARWYRAP 180
           + +   K  +HRD+   N ++  +  + +ADFGL++   S D   +    ++  +W    
Sbjct: 126 MEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALE 185

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNR 208
            L      Y    DVWA G    E++ R
Sbjct: 186 SL--ADNVYTTHSDVWAFGVTMWEIMTR 211

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 54.3 bits (130), Expect = 4e-08
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 5/104 (4%)

Query: 107 FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD 165
            L+  D+  Y     KG+ F   +  +HRD+   N+L+  +  +K+ DFGLAR I+  PD
Sbjct: 175 VLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD 234

Query: 166 --RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
             R+   ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 235 YVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 53.9 bits (129), Expect = 5e-08
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 30/214 (14%)

Query: 20  LGEGTYGVVYKA----ID---TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID        TVA+K ++     + ++   + E++++K + K  
Sbjct: 20  LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLS-DLVSEMEMMKMIGKHK 78

Query: 72  HIIELIDAFPHKGNLHLVFEF-----------------METDLETVIRNTNIFLSPADIK 114
           +II L+ A    G L+++ E+                 M+   +T  +     L+  D+ 
Sbjct: 79  NIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTC-KLPEEQLTFKDLV 137

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQV 172
           S      +G+ +   +  +HRD+   N+L+     +K+ADFGLAR   + D  ++ T+  
Sbjct: 138 SCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGR 197

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
               + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 198 LPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIF 230

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 54.1 bits (130), Expect = 5e-08
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 107 FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD 165
            L+  D+ SY     +G+ F   +  +HRD+   N+L+  +  +K+ DFGLAR I+  PD
Sbjct: 169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD 228

Query: 166 --RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL 205
             R+   ++  +W  APE +F  K Y    DVW+ G +  E+
Sbjct: 229 YVRKGDARLPLKWM-APESIFD-KVYTTQSDVWSFGVLLWEI 268

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 53.5 bits (128), Expect = 8e-08
 Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 8/109 (7%)

Query: 105 NIFLSP---ADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-I 160
           +++ SP    D+  Y     +G+ F   +  +HRD+   N+L+  +  +K+ DFGLAR I
Sbjct: 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI 224

Query: 161 FGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           +  PD  R+ + ++  +W  APE +F  K Y    DVW+ G +  E+ +
Sbjct: 225 YKDPDYVRKGSARLPLKWM-APESIFD-KVYTTQSDVWSFGVLLWEIFS 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 28/213 (13%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLG--KQKEGVNFTALREIKLLKELKSPH 72
           ++LGEG +G V +     D  +   VA+K ++L      E   F  L E   +K+   P+
Sbjct: 5   KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEF--LSEAACMKDFDHPN 62

Query: 73  IIELIDAFPHKGNLH------LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK--- 122
           +++LI       +L       ++  FM+  DL + +  + +   P  +   +Q  LK   
Sbjct: 63  VMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLP--LQTLLKFMV 120

Query: 123 ----GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTH--QVFAR 175
               G+ +   +  +HRD+   N ++     + +ADFGL++   S D  R     ++  +
Sbjct: 121 DIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 180

Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR 208
           W  A E L   + Y +  DVWA G    E+  R
Sbjct: 181 WI-AIESL-ADRVYTSKSDVWAFGVTMWEIATR 211

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 52.4 bits (125), Expect = 2e-07
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 17/195 (8%)

Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ-V 172
           ++ M+  L  + + H K ++HRD+K  N+ +   G++ L DFG A  F      F +  V
Sbjct: 270 RAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWV 329

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR--PFLQGSSDI-DQLGKIFAAFG 229
                 +PE+L G   Y    D+W+ G I  ++L+    P   G      QL KI  +  
Sbjct: 330 GTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSL- 387

Query: 230 TATPSQWPD-----LAYLPDYVEYQYV--AAPPL-RSLFPSASDDALDLLSKMFTYDPKA 281
           +    ++PD       Y+ D  E  +   + PPL R+L   A  D    L KM T+D   
Sbjct: 388 SVCDEEFPDPPCKLFDYI-DSAEIDHAGHSVPPLIRNLGLPA--DFEYPLVKMLTFDWHL 444

Query: 282 RITAQQALEHRYFSS 296
           R  A + L    FS+
Sbjct: 445 RPGAAELLALPLFSA 459

Length = 501

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 33/217 (15%)

Query: 18  EVLGEGTYGVVYKA--IDTKTG---QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           E LGE  +G VYK     T  G   Q VAIK ++  K +  +      E  +   L+ P+
Sbjct: 11  EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLK-DKAEGPLREEFKHEAMMRSRLQHPN 69

Query: 73  IIELIDAFPHKGNLHLVF---------EFM----------ETDLETVIRNTNIFLSPADI 113
           I+ L+     +  L ++F         EF+           TD +  +++T   L PAD 
Sbjct: 70  IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKST---LEPADF 126

Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQ 171
              +     G+ F     V+H+D+   N+L+     +K++D GL R   + D  +   + 
Sbjct: 127 VHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNS 186

Query: 172 VFA-RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           +   RW     +++G  ++    D+W+ G +  E+ +
Sbjct: 187 LLPIRWMSPEAIMYG--KFSIDSDIWSYGVVLWEVFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 50.0 bits (119), Expect = 9e-07
 Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 30/222 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKA----IDTKTGQ---TVAIKKIR-LGKQKEGVNFTALREIK 63
           DR +  + LGEG +G V +A    ID        TVA+K ++     K+  +  +  E++
Sbjct: 12  DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLIS--EME 69

Query: 64  LLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET----------------DLETVIRNTNI 106
           L+K + K  +II L+     +G L+++ E+                       + +    
Sbjct: 70  LMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEE 129

Query: 107 FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD- 165
            LS  D+ S      +G+ +   +  +HRD+   N+L+     +K+ADFGLAR     D 
Sbjct: 130 QLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY 189

Query: 166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            ++ ++      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 190 YKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIF 230

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 34/167 (20%)

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF--ARWYRAPELLFG 185
           H + ++HRD+K  N+ +   G +KL DFG ++ +           F    +Y APE L+ 
Sbjct: 186 HSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPE-LWE 244

Query: 186 AKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            K+Y    D+W+ G I  ELL   RPF +G S  + + ++   +G   P           
Sbjct: 245 RKRYSKKADMWSLGVILYELLTLHRPF-KGPSQREIMQQVL--YGKYDP----------- 290

Query: 245 YVEYQYVAAPPLRSLFPSASDDALD-LLSKMFTYDPKARITAQQALE 290
                          FP      +  LL  + + +P  R T QQ L 
Sbjct: 291 ---------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322

Length = 478

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 48.1 bits (114), Expect = 3e-06
 Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 35/216 (16%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQT--VAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + LGEG +G V +    +      VA+K  KI +  + E  +F  L E   +KE   P++
Sbjct: 5   KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDF--LSEAVCMKEFDHPNV 62

Query: 74  IELI---------DAFP---------HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
           + LI         + +P           G+LH    F+   L + + +   +L    +  
Sbjct: 63  MRLIGVCLQTVESEGYPSPVVILPFMKHGDLH---SFL---LYSRLGDCPQYLPTQMLVK 116

Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF-- 173
           +M     G+ +   K  +HRD+   N ++  +  + +ADFGL++   + D     ++   
Sbjct: 117 FMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKM 176

Query: 174 -ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR 208
             +W     L    + Y    DVW+ G    E+  R
Sbjct: 177 PVKWIAIESL--ADRVYTTKSDVWSFGVTMWEIATR 210

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 33/246 (13%)

Query: 20  LGEGTYGVVYKA-IDTKTGQT-VAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIEL 76
           +G G +G V          +  V +K++R      E + F  L+E++  +EL  P++++ 
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLF--LQEVQPYRELNHPNVLQC 60

Query: 77  ----IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM----TLKGLAFC 127
               I++ P      LV EF    DL+  +R+    ++    K  +Q        GL + 
Sbjct: 61  LGQCIESIP----YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWL 116

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL-- 182
           H+   +H D+   N  + +   +K+ D+GLA      D   T   H V  RW  APEL  
Sbjct: 117 HQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWL-APELVE 175

Query: 183 -----LFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
                L    Q     ++W+ G    EL     +P+    SD   L ++        P  
Sbjct: 176 IRGQDLLPKDQTKKS-NIWSLGVTMWELFTAADQPYPD-LSDEQVLKQVVREQDIKLPKP 233

Query: 236 WPDLAY 241
             DL Y
Sbjct: 234 QLDLKY 239

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 22/46 (47%), Positives = 30/46 (65%)

Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158
           IK  M+  L GL   H+  ++HRD+KP NLL+   GQ+K+ DFG A
Sbjct: 311 IKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAA 356

Length = 507

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 47.6 bits (113), Expect = 6e-06
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 13/130 (10%)

Query: 92  FMETDLETVI-RNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150
           +++ D+ + I     + L   D+ S+     KG++F   K  +HRD+   N+L+ +HG++
Sbjct: 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL-THGRI 252

Query: 151 -KLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            K+ DFGLAR   + D  +  +  AR    + APE +F    Y    DVW+ G +  E+ 
Sbjct: 253 TKICDFGLARDIRN-DSNYVVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEI- 309

Query: 207 NRRPFLQGSS 216
               F  GSS
Sbjct: 310 ----FSLGSS 315

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 46.5 bits (110), Expect = 9e-06
 Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 15/199 (7%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + +G+G +G V   +    G  VA+K I+     +   F A  E  ++ +L+  ++++L+
Sbjct: 12  QTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQA--FLA--EASVMTQLRHSNLVQLL 65

Query: 78  DAF-PHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTL-KGLAFCHKKWVLH 134
                 KG L++V E+M +  L   +R+    +   D      + + + + +      +H
Sbjct: 66  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVH 125

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+   N+L+      K++DFGL +   S     T ++  +W  APE L   K++    D
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEAL-REKKFSTKSD 181

Query: 195 VWAAGCIFAEL--LNRRPF 211
           VW+ G +  E+    R P+
Sbjct: 182 VWSFGILLWEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 22/195 (11%)

Query: 26  GVVYKAI---DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH 82
           GV+ K +   DT+T QT  +K +R  K  E       RE   +     P+++ L      
Sbjct: 4   GVIDKVLLVMDTRTQQTFILKGLR--KSSE-----YSRERLTIIPHCVPNMVCLHKYIVS 56

Query: 83  KGNLHLVFEFME--TDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDMKP 139
           + ++ LV +  E       + +  NI   P + +K +    +  L   H++ ++ RD+ P
Sbjct: 57  EDSVFLVLQHAEGGKLWSHISKFLNI---PEECVKRWAAEMVVALDALHREGIVCRDLNP 113

Query: 140 NNLLIGSHGQLKLADFG-LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAA 198
           NN+L+   G ++L  F   + +  S D     +     Y APE + G  +     D W+ 
Sbjct: 114 NNILLDDRGHIQLTYFSRWSEVEDSCDG----EAVENMYCAPE-VGGISEETEACDWWSL 168

Query: 199 GCIFAELLNRRPFLQ 213
           G I  ELL  +  ++
Sbjct: 169 GAILFELLTGKTLVE 183

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 9/169 (5%)

Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDR 166
           L+  D+ S+     +G+ F   K  +HRD+   N+L+     +K+ DFGLAR I    + 
Sbjct: 234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY 293

Query: 167 RFTHQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLG 222
                 F   +W  APE +F    Y    DVW+ G +  E+  L   P+     D     
Sbjct: 294 VSKGSTFLPVKWM-APESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN 351

Query: 223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLL 271
           KI + +  A P       Y  D +   + + P  R  F   SD    LL
Sbjct: 352 KIKSGYRMAKPDHATQEVY--DIMVKCWNSEPEKRPSFLHLSDIVESLL 398

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 6/115 (5%)

Query: 95  TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLAD 154
           T  +T+I N +  LS  D+  +      G+ F   K  +HRD+   N+LI     +K+ D
Sbjct: 224 TRRDTLI-NESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD 282

Query: 155 FGLAR-IFGSPDRRFTHQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           FGLAR I    +       F   +W  APE +F    Y    DVW+ G +  E+ 
Sbjct: 283 FGLARDIMRDSNYISKGSTFLPLKWM-APESIFN-NLYTTLSDVWSFGILLWEIF 335

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 46/198 (23%)

Query: 132 VLHRDMKPNNLLIGSHG----------------QLKLADFGLARIFGSPDRRF--THQVF 173
           ++H D+KP N+L+ +                  ++++ D G     G  D R   T  V 
Sbjct: 253 LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLG-----GCCDERHSRTAIVS 307

Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
            R YR+PE++ G   +    D+W+ GCI  EL   +       +++ L  +    G   P
Sbjct: 308 TRHYRSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGR-LP 365

Query: 234 SQWP-------------DLAYLPDYVEYQYVA----APPLRSLFPSASDDAL-DLLSKMF 275
           S+W                  L    + +++A    A P+R +     DD L DL+  + 
Sbjct: 366 SEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVI---RDDLLCDLIYGLL 422

Query: 276 TYDPKARITAQQALEHRY 293
            YD + R+ A+Q   H Y
Sbjct: 423 HYDRQKRLNARQMTTHPY 440

Length = 467

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 27/207 (13%)

Query: 20  LGEGTYG-VVYKAIDTKTGQT-VAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIEL 76
           +G G +G V+   I T TG   V +K+++     KE   F  L++    + L+ P+I++ 
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEF--LQQGDPYRILQHPNILQC 60

Query: 77  I----DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK---GLAFCH 128
           +    +A P+     LVFE+ E  DL++ +         + +    +M  +   G+   H
Sbjct: 61  LGQCVEAIPYL----LVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH 116

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH--QVFARWYRAPEL---- 182
           K   LH D+   N  + S   +K+ D+G+       D   T   +     + APEL    
Sbjct: 117 KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEF 176

Query: 183 ---LFGAKQYGAGVDVWAAGCIFAELL 206
              L  A+Q     +VWA G    EL 
Sbjct: 177 HGGLITAEQTKPS-NVWALGVTLWELF 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 10/110 (9%)

Query: 110 PADIKSYMQMTLK---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166
           P D+   ++ + +   G+ F   K  +HRD+   N+L+      K+ DFGLAR   + D 
Sbjct: 208 PLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMN-DS 266

Query: 167 RFTHQVFARW---YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPF 211
            +  +  AR    + APE +F    Y    DVW+ G +  E+  L + P+
Sbjct: 267 NYVVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGKSPY 315

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 19/162 (11%)

Query: 19  VLGEGTYGVVYKAI-----DTKTGQTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPH 72
            LG G +G VY+ +            VA+K +     +++  +F  L E  ++ +    +
Sbjct: 13  ALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDF--LMEALIMSKFNHQN 70

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVI---RNTNIFLSPADIKSYMQMTL---KGLA 125
           I+ LI     +    ++ E M   DL++ +   R      S   +K  +       KG  
Sbjct: 71  IVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCK 130

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLAR-IFGS 163
           +  +   +HRD+   N L+   G     K+ADFG+AR I+ +
Sbjct: 131 YLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRA 172

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 13/113 (11%)

Query: 104 TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFG 162
               LS A++K  ++  ++ L   HK  ++H D+K  N+L   +  ++ L D+GL +I G
Sbjct: 102 KEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161

Query: 163 SP---DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR-PF 211
           +P   D   T   F     +PE + G   Y    D WA G +  ELL  + PF
Sbjct: 162 TPSCYDG--TLDYF-----SPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPF 206

Length = 267

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 12/111 (10%)

Query: 97  LETVIRNTNIFLSPAD------IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150
           LE ++ NT              IK+ M+  L  L + H+  + H D+KP N+++  + + 
Sbjct: 106 LEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165

Query: 151 KLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCI 201
            + D+G+A  F        H     + +  + L     Y AG+D     C+
Sbjct: 166 YIIDYGIASHF------IIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACV 210

Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	397
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	100.0
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
PRK09188	365	serine/threonine protein kinase; Provisional	99.96
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.96
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.94
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.94
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.93
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.92
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.92
PRK12274	218	serine/threonine protein kinase; Provisional	99.92
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.91
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.9
PRK10345	210	hypothetical protein; Provisional	99.89
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.88
smart00090	237	RIO RIO-like kinase.	99.88
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.87
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.84
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.84
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.83
PRK14879	211	serine/threonine protein kinase; Provisional	99.82
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.8
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.8
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.79
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.79
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.77
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.76
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.73
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.71
KOG1243	690	consensus Protein kinase [General function predict	99.63
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.61
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.6
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.57
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.56
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.53
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.45
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.43
KOG3087	229	consensus Serine/threonine protein kinase [General	99.38
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.33
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.33
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.24
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.22
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.17
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.11
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.07
PRK09902	216	hypothetical protein; Provisional	98.91
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.87
COG4248	637	Uncharacterized protein with protein kinase and he	98.86
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.84
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.74
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.7
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.7
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.49
PF01636	239	APH: Phosphotransferase enzyme family This family	98.48
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.48
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.45
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.43
PLN02876	822	acyl-CoA dehydrogenase	98.4
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.3
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.21
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	98.19
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.11
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.09
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	98.0
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.98
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.95
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.88
KOG2270	520	consensus Serine/threonine protein kinase involved	97.87
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.82
PRK05231	319	homoserine kinase; Provisional	97.82
PRK10593	297	hypothetical protein; Provisional	97.78
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.69
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.64
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.61
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.55
PRK12396	409	5-methylribose kinase; Reviewed	97.48
PLN02236	344	choline kinase	97.35
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.32
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.29
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.16
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.15
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	97.08
PLN02756	418	S-methyl-5-thioribose kinase	97.03
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.79
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.7
PTZ00384	383	choline kinase; Provisional	96.66
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.53
PRK06148	1013	hypothetical protein; Provisional	96.42
PTZ00296	442	choline kinase; Provisional	96.21
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.1
PRK11768	325	serine/threonine protein kinase; Provisional	95.97
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	95.2
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.14

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.4e-75  Score=501.75  Aligned_cols=300  Identities=73%  Similarity=1.202  Sum_probs=293.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|...++||+|.||+||+|++..+|+.||||+++.....+..+..++|||+.|+.++|+||+.++|+|.+.+.+.+|+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            68999999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      |++.||...++.....++..+++.|+.+++.||+|||+++|+||||||+|+||+++|.+||+|||+|+.++++....++.
T Consensus        82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~  161 (318)
T KOG0659|consen   82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ  161 (318)
T ss_pred             eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      +.|+||+|||.++|++.|+..+||||.|||+.||+.|.|+|.|.++.+++..|+..+|++.+..||++..++++.++++.
T Consensus       162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~  241 (318)
T KOG0659|consen  162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF  241 (318)
T ss_pred             eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCccc
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT  311 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~  311 (397)
                      ..++...+++..+.++.||+.+||.+||.+|+|+.|+|+|+||++.+.++.+...+.|..
T Consensus       242 P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~~  301 (318)
T KOG0659|consen  242 PKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPST  301 (318)
T ss_pred             CCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCcc
Confidence            999999999999999999999999999999999999999999999999999888887765

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.1e-66  Score=456.90  Aligned_cols=304  Identities=43%  Similarity=0.807  Sum_probs=277.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~~~   87 (397)
                      -.+.|++++.|++|+||.||+|+++++++.||+|.++....++..-...+|||.+|.+++|||||.+-++..  +-+.+|
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy  153 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY  153 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence            367899999999999999999999999999999999988888888888899999999999999999988763  345799


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||||+.||..++.....+|...+++.++.|++.||+|||.++|+||||||+|+|++..|.+||+|||+|+.++++-..
T Consensus       154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~  233 (419)
T KOG0663|consen  154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP  233 (419)
T ss_pred             eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCccc
Confidence            99999999999999988888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ++..+-|.||+|||.|+|.+.|++++|+||+|||+.||++++|.|.|.++.+++.+|+..+|.+....||+...++..-.
T Consensus       234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~  313 (419)
T KOG0663|consen  234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKK  313 (419)
T ss_pred             CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998887643


Q ss_pred             ccc--ccCCCccccCCCCC--HHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCccccc
Q 015948          248 YQY--VAAPPLRSLFPSAS--DDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPATKR  313 (397)
Q Consensus       248 ~~~--~~~~~~~~~~~~~s--~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~  313 (397)
                      ..+  ..-..++..|+.++  +...+|+..+|.+||.+|.||+|+|+|.||...+.+..+...|.-+.+.
T Consensus       314 ~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P~k~  383 (419)
T KOG0663|consen  314 MTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWPAKS  383 (419)
T ss_pred             cccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCcccc
Confidence            333  33345667777654  9999999999999999999999999999999988887776665444433

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2.1e-67  Score=458.70  Aligned_cols=285  Identities=41%  Similarity=0.703  Sum_probs=256.9

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|+.+.++|+|+||+||+|+++.||+.||||++..+........-++|||++|++|+|+|+|.++++|.....+++|+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            67999999999999999999999999999999998777666777788999999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ||+.++++.+......++++.++.|++|++.|++|||++++||||||||||||+.+|.+||||||+|+.+..+...++..
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY  161 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY  161 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh
Confidence            99999999988877679999999999999999999999999999999999999999999999999999998888899999


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc---
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY---  248 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---  248 (397)
                      +.|+||+|||.+.|..+|+..+||||+||++.||++|.|+|+|.++.+++..|...+|...|+...-...-+-+...   
T Consensus       162 VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP  241 (396)
T KOG0593|consen  162 VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLP  241 (396)
T ss_pred             hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecC
Confidence            99999999999999899999999999999999999999999999999999999999998777543211111111111   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ......+++..+|.++.-+.||+.+||..||.+|++.+|+|.|+||.+
T Consensus       242 ~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  242 EPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             CCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            112344677888999999999999999999999999999999999954

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.7e-65  Score=472.12  Aligned_cols=302  Identities=45%  Similarity=0.822  Sum_probs=271.4

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--   83 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--   83 (397)
                      +...-.+.|+.+++||+|.||.||+|++..+|+.||+|+++.....+..-..+.|||.||++|.||||++|.+...+.  
T Consensus       111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~  190 (560)
T KOG0600|consen  111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS  190 (560)
T ss_pred             ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC
Confidence            344457889999999999999999999999999999999999887777777888999999999999999999987665  


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      +.+|||||||+.||..++......|++.+++.|+.||+.||+|||++||+|||||.+|||||.+|.+||+|||+|+++..
T Consensus       191 ~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~  270 (560)
T KOG0600|consen  191 GSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP  270 (560)
T ss_pred             ceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence            78999999999999999999888899999999999999999999999999999999999999999999999999998755


Q ss_pred             CC-CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          164 PD-RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       164 ~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .. ..++..+-|.||+|||+|+|...|+.++|+||.||||.||++|+|+|+|.++.+++..|++..|.+....|+ ...+
T Consensus       271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kL  349 (560)
T KOG0600|consen  271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKL  349 (560)
T ss_pred             CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccC
Confidence            44 348889999999999999999999999999999999999999999999999999999999999999999999 5555


Q ss_pred             ccccccccc--cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCC
Q 015948          243 PDYVEYQYV--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPR  308 (397)
Q Consensus       243 ~~~~~~~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~  308 (397)
                      +....+.-.  ....++..+..++..+.+|+..||..||.+|.||.++|+|+||+..+.+..+..++.
T Consensus       350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp~  417 (560)
T KOG0600|consen  350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLPK  417 (560)
T ss_pred             CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCCC
Confidence            544433322  223456667888999999999999999999999999999999987777776665554

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-65  Score=468.37  Aligned_cols=289  Identities=40%  Similarity=0.700  Sum_probs=261.8

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC-e
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG-N   85 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~-~   85 (397)
                      ..+.++|.+.++||.|.||.||+|+.+.+|..||||.+++.... .....-+||++.|++|+ |||||++.+.+.+.+ .
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~   84 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI   84 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence            34689999999999999999999999999999999998765433 22223468999999999 999999999998877 9


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      +|+|||||+.+|+++++.++..|++..++.|++||++||+|+|.+|+.|||||||||||.....+||+|||+|+.+.+ .
T Consensus        85 L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S-k  163 (538)
T KOG0661|consen   85 LYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS-K  163 (538)
T ss_pred             EeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc-C
Confidence            999999999999999999999999999999999999999999999999999999999999888899999999998754 3


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ..++..+.|+||+|||+|+....|+.++||||+|||++|+.+-+|+|.|.++.+++.+|...+|++....|+....+...
T Consensus       164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~  243 (538)
T KOG0661|consen  164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA  243 (538)
T ss_pred             CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence            46788999999999999999889999999999999999999999999999999999999999999999999886666665


Q ss_pred             cccccccC--CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          246 VEYQYVAA--PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       246 ~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ..+++...  .++..+.+.++.++.+||.+||.+||.+||||+|+|+||||+...
T Consensus       244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence            66655444  457788899999999999999999999999999999999998643

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-63  Score=451.58  Aligned_cols=270  Identities=30%  Similarity=0.472  Sum_probs=230.6

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-----ccchHHHHHHHHHhcCCCCeeEEEeee
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-----VNFTALREIKLLKELKSPHIIELIDAF   80 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~l~~~~   80 (397)
                      ..+.+.+.|.+.+.||+|+||.|-+|.++++|+.||||++.+.+....     ......+|+++|++|+|||||+++++|
T Consensus       166 ~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f  245 (475)
T KOG0615|consen  166 PPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF  245 (475)
T ss_pred             ccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee
Confidence            455689999999999999999999999999999999999988764331     222346899999999999999999999


Q ss_pred             ecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeec
Q 015948           81 PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFG  156 (397)
Q Consensus        81 ~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG  156 (397)
                      +..+..||||||++ |+|++.+... +.+.+...+.+++||+.|+.|||++||+||||||+|||+..+   -.+||+|||
T Consensus       246 ~~~ds~YmVlE~v~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFG  324 (475)
T KOG0615|consen  246 EVPDSSYMVLEYVEGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFG  324 (475)
T ss_pred             ecCCceEEEEEEecCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccc
Confidence            99999999999999 5888888764 458999999999999999999999999999999999999876   679999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID-QLGKIFAAFGTATP  233 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~  233 (397)
                      +|+..+ ....+.+.|||+.|.|||++.+.  ..|..++|||||||+||-+++|.+||.+..... ..++|.++--...|
T Consensus       325 lAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p  403 (475)
T KOG0615|consen  325 LAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGP  403 (475)
T ss_pred             hhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccC
Confidence            999887 45677889999999999999652  335568999999999999999999999876554 66666554222222


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                      .                        .+..+|+++++||.+||..||++|||++|+|+||||...+...
T Consensus       404 ~------------------------~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~s  447 (475)
T KOG0615|consen  404 L------------------------QWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCLS  447 (475)
T ss_pred             h------------------------hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccccc
Confidence            2                        2346799999999999999999999999999999999765433

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.2e-61  Score=435.15  Aligned_cols=289  Identities=50%  Similarity=0.838  Sum_probs=265.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCC-----
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKG-----   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~-----   84 (397)
                      ...|..+++||+|+||+||+|+++.+|+.||+|+++.....+..-....+|+.+|+.|+|+| ||.+++.+....     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            56688899999999999999999999999999999988776777778899999999999999 999999997766     


Q ss_pred             -eEEEEEEccccCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           85 -NLHLVFEFMETDLETVIRNTN---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        85 -~~~lv~e~~~g~L~~~~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                       .+++||||+.-+|..++....   ..++...++.+++||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.
T Consensus        90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence             899999999999999998876   3588899999999999999999999999999999999999999999999999998


Q ss_pred             eCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      +.-+...+++.++|.||+|||++.+...|+..+||||+|||++||+++++.|.+.++.+++..|+..+|++....||...
T Consensus       170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~  249 (323)
T KOG0594|consen  170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS  249 (323)
T ss_pred             hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence            88788889999999999999999999899999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccc-ccccc-CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          241 YLPDYVE-YQYVA-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       241 ~~~~~~~-~~~~~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      .++++-. +.... ...+....+..++++.+++.+||+++|.+|.|++.+|+||||.....
T Consensus       250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE  310 (323)
T ss_pred             ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence            8888763 22222 44566777788899999999999999999999999999999987543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-62  Score=439.05  Aligned_cols=271  Identities=28%  Similarity=0.446  Sum_probs=238.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|+++++||+|+||+||.++.+.+++.||+|++++....+. .......|..||.+++||+||+++..|++.+.+|+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            7899999999999999999999999999999999988765443 344577899999999999999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      +||+.| +|...+.+ .+.+++..++.|+.+|+.||.|||++|||||||||+||||+.+|+++|+|||+++.........
T Consensus       104 ld~~~GGeLf~hL~~-eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t  182 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQR-EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDAT  182 (357)
T ss_pred             EeccCCccHHHHHHh-cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCcc
Confidence            999996 66666665 4459999999999999999999999999999999999999999999999999999766666666


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      .+.|||+.|||||++.+ ..|+..+|+||||+++|||++|.+||.+.+....+.+|.+.-.                   
T Consensus       183 ~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~-------------------  242 (357)
T KOG0598|consen  183 RTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL-------------------  242 (357)
T ss_pred             ccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC-------------------
Confidence            77899999999999988 5799999999999999999999999999999998888876521                   


Q ss_pred             ccccCCCccccCCC-CCHHHHHHHHHhcCcCCCCCC----CHHHHhcCCCCCCCCCCCCCCCCCCccc
Q 015948          249 QYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARI----TAQQALEHRYFSSAPLPTEPNKLPRPAT  311 (397)
Q Consensus       249 ~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~R~----t~~e~l~hp~~~~~~~~~~~~~~~~~~~  311 (397)
                               ...+. +|.++++||.++|+.||++|.    .++++.+||||.+..|.........|+.
T Consensus       243 ---------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF  301 (357)
T KOG0598|consen  243 ---------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPF  301 (357)
T ss_pred             ---------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCe
Confidence                     11222 589999999999999999996    6889999999999988765444443433

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.6e-61  Score=453.68  Aligned_cols=260  Identities=28%  Similarity=0.462  Sum_probs=234.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+|...++||+|||++||.+++..+|+.||+|++.+.. .+........+||+|.++|+|||||+++++|++..++|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            57999999999999999999999999999999998754 45556677889999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |+|. |+|..+++ +.+.++|.+|+.|++||+.||.|||+++|+|||||..|+||+++.+|||+|||+|+.+..+..+-.
T Consensus        98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~  176 (592)
T KOG0575|consen   98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK  176 (592)
T ss_pred             EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence            9999 56666665 667799999999999999999999999999999999999999999999999999999988777788


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      +.||||.|.|||++.+ ...+..+||||+|||||.||.|+|||...+-.+.+.+|...-                     
T Consensus       177 TlCGTPNYIAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~---------------------  234 (592)
T KOG0575|consen  177 TLCGTPNYIAPEVLNK-SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE---------------------  234 (592)
T ss_pred             eecCCCcccChhHhcc-CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC---------------------
Confidence            8999999999999986 779999999999999999999999999998899998886641                     


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                             ...+..+|.++++||.+||+.||.+|||++++|.|+||+..-.|.
T Consensus       235 -------Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~  279 (592)
T KOG0575|consen  235 -------YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPA  279 (592)
T ss_pred             -------cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCC
Confidence                   112235699999999999999999999999999999996654443

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-61  Score=432.31  Aligned_cols=292  Identities=39%  Similarity=0.676  Sum_probs=253.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-----C
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-----K   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----~   83 (397)
                      .+..+|...+.||.|+||.|+.|.++.+|+.||||++.......-...+..||+++|+.++|+||+.+.+.+..     -
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            35677888899999999999999999999999999998655555556678899999999999999999999855     3


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ..+|+|+|+|+.||.+.++... .+++..++.+++||+.||+|+|+.||+||||||.|+|++.+..+||||||+|+....
T Consensus        99 ~DvYiV~elMetDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen   99 NDVYLVFELMETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK  177 (359)
T ss_pred             ceeEEehhHHhhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence            4799999999999999988754 399999999999999999999999999999999999999999999999999998753


Q ss_pred             --CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC-
Q 015948          164 --PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA-  240 (397)
Q Consensus       164 --~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-  240 (397)
                        .....+..+.|+||+|||++.....|+.++||||+||||.||++|++.|.|.+..+++..|+..+|++.+..+.... 
T Consensus       178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s  257 (359)
T KOG0660|consen  178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS  257 (359)
T ss_pred             cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence              34456888999999999999988999999999999999999999999999999999999999999988665443222 


Q ss_pred             --CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          241 --YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       241 --~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                        ..+...........++..+++++++.+.||+.+||.+||.+|+|++|+|+|||+...-.+.
T Consensus       258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~  320 (359)
T KOG0660|consen  258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE  320 (359)
T ss_pred             HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence              1111112233455678889999999999999999999999999999999999998654443

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-59  Score=436.30  Aligned_cols=264  Identities=30%  Similarity=0.472  Sum_probs=234.2

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCe
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGN   85 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~   85 (397)
                      ++-..+|.+.+.||.|+|++|++|+++.+++.||||++.+... ++....-+.+|-.+|.+| .||.|++|+..|+++..
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            4557789999999999999999999999999999999977643 233333456799999999 89999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|+|+||++ |+|+.+|.+.+ .|++..++.|+.||+.||+|||++||||||||||||||+.+|++||+|||.|+.+...
T Consensus       149 LYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~  227 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS  227 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence            999999998 89999999864 5999999999999999999999999999999999999999999999999999887432


Q ss_pred             C-------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          165 D-------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       165 ~-------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      .             ......+||..|.+||+|.. ...+.++|||+||||||+|+.|.|||.+.++...+.+|++.--  
T Consensus       228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y--  304 (604)
T KOG0592|consen  228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY--  304 (604)
T ss_pred             hccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc--
Confidence            1             11256899999999999976 6789999999999999999999999999999999999988621  


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                                                .+.+..++.++|||.++|..||.+|+|++||.+||||.++.|..
T Consensus       305 --------------------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  305 --------------------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             --------------------------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence                                      23345689999999999999999999999999999999988764

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-58  Score=376.22  Aligned_cols=286  Identities=48%  Similarity=0.833  Sum_probs=271.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .+|...++||+|.||+||+|++..+++.||+|.++.....+..-..+++|+-+|+.++|.|||++++....+..+-+|+|
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence            45788899999999999999999999999999999998888888899999999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ||..+|..++...++.++.+.++.++.|++.||.|||++++.||||||.|+||+.+|++||+|||+|+.++-+-+.+...
T Consensus        82 ~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae  161 (292)
T KOG0662|consen   82 FCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE  161 (292)
T ss_pred             HhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999888888889


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      +.|.||++|.+++|.+-|+.+.|+||.|||+.|+.. |+|.|.+++..+++.+|+..+|.+....||.+..++++..+-.
T Consensus       162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~  241 (292)
T KOG0662|consen  162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPI  241 (292)
T ss_pred             eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCC
Confidence            999999999999999999999999999999999985 9999999999999999999999999999999999999887765


Q ss_pred             ccC-CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          251 VAA-PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       251 ~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      ..+ ..+..+.|.++...+||++++|..+|.+|++++++++||||++.
T Consensus       242 ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  242 YPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             ccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence            544 45677888899999999999999999999999999999999864

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-58  Score=415.19  Aligned_cols=257  Identities=28%  Similarity=0.462  Sum_probs=219.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe-EEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN-LHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~-~~lv   89 (397)
                      ..+.+.++.||+|+.|+||+|+|+.|++.||+|++... ..+....++.+|+++++.++|||||.+|++|.+++. ++|+
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~  156 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISIC  156 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEee
Confidence            45788899999999999999999999999999999443 445566678899999999999999999999999994 9999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||+| +|...+.. -+.++|.....++.++++||.|||+ ++||||||||+||||+..|+|||||||.+..+.+.  .
T Consensus       157 mEYMDgGSLd~~~k~-~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~  233 (364)
T KOG0581|consen  157 MEYMDGGSLDDILKR-VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--I  233 (364)
T ss_pred             hhhcCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--h
Confidence            999995 55555554 4569999999999999999999995 89999999999999999999999999999887554  5


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC-----CcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-----SDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ..+.+||..|||||.+.+ ..|+.++||||||++++||++|+.||...     +..+.+..|...    .+...|..   
T Consensus       234 a~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~----ppP~lP~~---  305 (364)
T KOG0581|consen  234 ANTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE----PPPRLPEG---  305 (364)
T ss_pred             cccccccccccChhhhcC-CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC----CCCCCCcc---
Confidence            678899999999999988 67999999999999999999999998875     334444444332    11111110   


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                         ..|+++++||..||++||.+|+++.|+++|||+....
T Consensus       306 -------------------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  306 -------------------EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             -------------------cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence                               2599999999999999999999999999999997643

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.8e-57  Score=424.39  Aligned_cols=265  Identities=30%  Similarity=0.485  Sum_probs=228.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++++.||+|+||.||+|+.+.||..||+|++++... ...+....+.|-++|....+|+||+|+.+|++..++|||
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi  219 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI  219 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence            6789999999999999999999999999999999998763 334445677899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC-----
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS-----  163 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~-----  163 (397)
                      |||++ ||+..++.+.+ .|+++.+++|+.+++.|++.||+.|+|||||||+|+|||..|++||+|||++.-+..     
T Consensus       220 MEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~  298 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE  298 (550)
T ss_pred             EEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence            99999 58888887765 499999999999999999999999999999999999999999999999999853211     


Q ss_pred             --------------------C-----C-----------------CcccccccCceeeChhcccCccCCCCcchHHHHHHH
Q 015948          164 --------------------P-----D-----------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCI  201 (397)
Q Consensus       164 --------------------~-----~-----------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~i  201 (397)
                                          +     .                 ......+|||.|+|||++.+ +.|+..+|+||||||
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~I  377 (550)
T KOG0605|consen  299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCI  377 (550)
T ss_pred             hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHH
Confidence                                0     0                 01235789999999999998 679999999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC
Q 015948          202 FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA  281 (397)
Q Consensus       202 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  281 (397)
                      +||||.|.|||.+++..+...+|+..-....   +|      .               -..+|++++|||.+||. ||.+
T Consensus       378 myEmLvGyPPF~s~tp~~T~rkI~nwr~~l~---fP------~---------------~~~~s~eA~DLI~rll~-d~~~  432 (550)
T KOG0605|consen  378 MYEMLVGYPPFCSETPQETYRKIVNWRETLK---FP------E---------------EVDLSDEAKDLITRLLC-DPEN  432 (550)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc---CC------C---------------cCcccHHHHHHHHHHhc-CHHH
Confidence            9999999999999999999999876421111   00      0               11347999999999999 9999


Q ss_pred             CCC---HHHHhcCCCCCCCCCCCC
Q 015948          282 RIT---AQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       282 R~t---~~e~l~hp~~~~~~~~~~  302 (397)
                      |..   ++||.+||||.++.|...
T Consensus       433 RLG~~G~~EIK~HPfF~~v~W~~l  456 (550)
T KOG0605|consen  433 RLGSKGAEEIKKHPFFKGVDWDHL  456 (550)
T ss_pred             hcCcccHHHHhcCCccccCCcchh
Confidence            985   899999999999998754

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-58  Score=400.21  Aligned_cols=260  Identities=26%  Similarity=0.407  Sum_probs=230.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      -.++|++++.||.|+||.|.+++++.+|.+||+|++.+... +-.+.+...+|..+|+.+.||+++++++.|.+.+++||
T Consensus        42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym  121 (355)
T KOG0616|consen   42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM  121 (355)
T ss_pred             chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence            46789999999999999999999999999999999987652 22233456689999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||++| .|..++++.+ +|++..++.|+.||+.||+|||+++|++|||||||||||.+|.+||+|||+|+....   .
T Consensus       122 vmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---r  197 (355)
T KOG0616|consen  122 VMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---R  197 (355)
T ss_pred             EEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC---c
Confidence            9999995 6777777654 599999999999999999999999999999999999999999999999999998743   3


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ..+.||||.|+|||++.. +.|+.++|+|||||++|||+.|.+||.+.+....+++|+++--                  
T Consensus       198 T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v------------------  258 (355)
T KOG0616|consen  198 TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV------------------  258 (355)
T ss_pred             EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc------------------
Confidence            678899999999999976 7899999999999999999999999999999999999987622                  


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~~~  302 (397)
                                .+++.+|.++++||.++|+.|-.+|.     ...+|..||||.+..|...
T Consensus       259 ----------~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i  308 (355)
T KOG0616|consen  259 ----------KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAI  308 (355)
T ss_pred             ----------cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHH
Confidence                      12234589999999999999999994     5789999999999887654

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-57  Score=408.76  Aligned_cols=285  Identities=37%  Similarity=0.660  Sum_probs=242.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----   83 (397)
                      ...=.|.-.+++|.|+||+||.|....+++.||||++-....-.      -+|+.+|+.+.|||||+|..+|...     
T Consensus        21 ~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~   94 (364)
T KOG0658|consen   21 KVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK------NRELQIMRKLDHPNIVRLLYFFSSSTESDE   94 (364)
T ss_pred             ceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCCch
Confidence            34556889999999999999999999999999999986443211      2799999999999999999888432     


Q ss_pred             CeEEEEEEccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccce
Q 015948           84 GNLHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLAR  159 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~  159 (397)
                      -++.+||||++-+|...++.   .+..++.-.++-|.+||++||.|||+.||+||||||.|||+|.+ |.+||||||.|+
T Consensus        95 ~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK  174 (364)
T KOG0658|consen   95 VYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAK  174 (364)
T ss_pred             hHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence            25678999999999999885   35568999999999999999999999999999999999999976 999999999999


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .+...... .+.+.|++|+|||.++|++.|+.++||||.||++.||+-|+|.|.|.+..+++..|++.+|.++.+....+
T Consensus       175 ~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m  253 (364)
T KOG0658|consen  175 VLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM  253 (364)
T ss_pred             eeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence            88655443 66778999999999999999999999999999999999999999999999999999999999887765544


Q ss_pred             CCCccccccccccCCCccc-cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRS-LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      ...-....+......++.. +....++++.+|+.++|.++|.+|.++.|++.||||.....+
T Consensus       254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence            3322223333344444444 667889999999999999999999999999999999865544

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-57  Score=408.75  Aligned_cols=262  Identities=32%  Similarity=0.520  Sum_probs=227.4

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ...++|.+.+.||+|+||+||+|+++.++..||||.+.+.+......+.+..|+++|+.++|||||.++|+++.++++|+
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l   86 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL   86 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence            45788999999999999999999999999999999998876555555667899999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC------CcEEEeeeccceee
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH------GQLKLADFGLARIF  161 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~------~~~kl~DFG~a~~~  161 (397)
                      |||||. |||..++++.+ .+++..++.++.||+.||++||+++||||||||+||||+..      -.+||+|||+|+.+
T Consensus        87 VMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   87 VMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            999999 68888888765 49999999999999999999999999999999999999875      35899999999988


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      . +.....+.||++.|||||++.. .+|+.|+|+||+|+|+|+|++|++||...+..+.+..+.+.-...          
T Consensus       166 ~-~~~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~----------  233 (429)
T KOG0595|consen  166 Q-PGSMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV----------  233 (429)
T ss_pred             C-chhHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc----------
Confidence            6 4556678899999999999965 679999999999999999999999999999888877554331100          


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                     ..+...++....+|+..+|+.++..|.+..+-+.|++....+
T Consensus       234 ---------------~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  234 ---------------PVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             ---------------CchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence                           011123467778999999999999999999999999987654

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-56  Score=429.96  Aligned_cols=310  Identities=23%  Similarity=0.358  Sum_probs=253.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~   87 (397)
                      -.++|++.++||+|+||+|++|..+.+++.||||++++... .....+..+.|..|+...+ ||+++.++.+|++.+++|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            36889999999999999999999999999999999998763 3334456678888888875 999999999999999999


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      +||||+.|+.+..+. +...|++..++.|+..|+.||+|||++||||||||.+|||+|.+|++||+|||+++..-.....
T Consensus       446 fvmey~~Ggdm~~~~-~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~  524 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHI-HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR  524 (694)
T ss_pred             EEEEecCCCcEEEEE-ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCc
Confidence            999999965533333 3345999999999999999999999999999999999999999999999999999987666678


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      .++.|||+.|||||++.+ ..|+.++|||||||+|||||.|.+||.|.++.+....|+..           ..       
T Consensus       525 TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d-----------~~-------  585 (694)
T KOG0694|consen  525 TSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND-----------EV-------  585 (694)
T ss_pred             cccccCChhhcChhhhcc-CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC-----------CC-------
Confidence            889999999999999987 67999999999999999999999999999999999888652           11       


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCCCCCCCCCCCccc----cccCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPTEPNKLPRPAT----KRASKAS  318 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~~~~~~~~~~~~~----~~~~~~~  318 (397)
                                .++..+|.++.+++.++|++||++|+.+     ++|..||||....|....+....|+.    +...+.+
T Consensus       586 ----------~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~s  655 (694)
T KOG0694|consen  586 ----------RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVS  655 (694)
T ss_pred             ----------CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhhhc
Confidence                      1122459999999999999999999864     78999999999988654443333322    2222344


Q ss_pred             CCCC--CCCCcccCCcccccCCCCCCCCCCCCC
Q 015948          319 DFNP--QEGPTVLSPPRKTRRVMPDREGFEGNA  349 (397)
Q Consensus       319 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (397)
                      ++..  ..+.+++.|+........+++.|.+.+
T Consensus       656 nFd~eFt~e~p~Lt~~~~~~l~~~~q~~F~~Fs  688 (694)
T KOG0694|consen  656 NFDEEFTSEKPALTPSDPRPLTEEEQEAFRDFS  688 (694)
T ss_pred             ccchhhhcCCCccCCCCccccchhhHHHhcCcc
Confidence            4432  345556666555555555666666554

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-58  Score=390.64  Aligned_cols=264  Identities=32%  Similarity=0.471  Sum_probs=237.4

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ....+.+.|.+.+.||+|.|+.||++.+..+|+.||+|++...+......+.+.+|+.|-+.|+|||||+|.+.+.+.++
T Consensus         5 ~~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~   84 (355)
T KOG0033|consen    5 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF   84 (355)
T ss_pred             cccccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccce
Confidence            56678999999999999999999999999999999999998777666667778899999999999999999999999999


Q ss_pred             EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeeccceee
Q 015948           86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIF  161 (397)
Q Consensus        86 ~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~a~~~  161 (397)
                      .|+|+|++.| +|...|..+ ..++|..+..+++||++||+|||.+||||||+||+|+|+.+.   ..+||+|||+|..+
T Consensus        85 ~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l  163 (355)
T KOG0033|consen   85 HYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV  163 (355)
T ss_pred             eEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence            9999999995 788777765 448999999999999999999999999999999999999654   35999999999998


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      + ........+|||.|||||++.. ..|+..+|||+-|||||-|+.|++||.+.+....+++|++.--...+.+      
T Consensus       164 ~-~g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~------  235 (355)
T KOG0033|consen  164 N-DGEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPE------  235 (355)
T ss_pred             C-CccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcc------
Confidence            7 4556677899999999999976 6799999999999999999999999999999999999988644333333      


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                        ++.+++++++||++||..||++|+|+.|+|+|||+.+
T Consensus       236 ------------------w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  236 ------------------WDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             ------------------cCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence                              4567999999999999999999999999999999975

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=4.7e-55  Score=406.27  Aligned_cols=283  Identities=41%  Similarity=0.778  Sum_probs=243.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|++..++..||+|++..... ......+.+|+.+++.++||||+++++++.+++..|+||
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF   82 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            3679999999999999999999999999999999875432 223345778999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||++|+|.+.+......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...........
T Consensus        83 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~  162 (288)
T cd07871          83 EYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSN  162 (288)
T ss_pred             eCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccC
Confidence            99999999998877667899999999999999999999999999999999999999999999999999876554444556


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....|+.......+..+.+
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd07871         163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLF  242 (288)
T ss_pred             ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcccc
Confidence            67889999999987766789999999999999999999999999999999999999999888888876554333322221


Q ss_pred             c--cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 V--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 ~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .  ...+.....+.++.++++||.+||++||.+|||++|+++||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         243 PQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             CccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            1  1122233446789999999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=6.4e-55  Score=417.60  Aligned_cols=288  Identities=33%  Similarity=0.579  Sum_probs=235.2

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-C-----CCeeEEEeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-S-----PHIIELIDAF   80 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-h-----p~iv~l~~~~   80 (397)
                      .+.+..+|.|.++||+|+||.|-+|++.+|++.||||+++...   ........|+.+|..|+ |     -|+|+++|+|
T Consensus       181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F  257 (586)
T KOG0667|consen  181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF  257 (586)
T ss_pred             cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence            3446679999999999999999999999999999999997543   33445668999999997 3     4899999999


Q ss_pred             ecCCeEEEEEEccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC--cEEEeeecc
Q 015948           81 PHKGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG--QLKLADFGL  157 (397)
Q Consensus        81 ~~~~~~~lv~e~~~g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~--~~kl~DFG~  157 (397)
                      ...+|+|||+|.++-+|.++++..+. .|+...++.++.||+.||.+||+.||||+|||||||||...+  .|||+|||.
T Consensus       258 ~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGS  337 (586)
T KOG0667|consen  258 YFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGS  337 (586)
T ss_pred             ccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccc
Confidence            99999999999999999999988643 489999999999999999999999999999999999998654  699999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      |+....   .....+.+++|+|||+++| ..|+.+.||||||||++||++|.|+|.|.++.+++..|++.+|.+++.-+.
T Consensus       338 Sc~~~q---~vytYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~  413 (586)
T KOG0667|consen  338 SCFESQ---RVYTYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLD  413 (586)
T ss_pred             ccccCC---cceeeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            997643   2337889999999999999 679999999999999999999999999999999999999999976543111


Q ss_pred             ---C------C-CCCcccc-c----------------------cccc-cCCCccccCC-CCCHHHHHHHHHhcCcCCCCC
Q 015948          238 ---D------L-AYLPDYV-E----------------------YQYV-AAPPLRSLFP-SASDDALDLLSKMFTYDPKAR  282 (397)
Q Consensus       238 ---~------~-~~~~~~~-~----------------------~~~~-~~~~~~~~~~-~~s~~~~~li~~~L~~dP~~R  282 (397)
                         .      . ...+... +                      .... ....+....+ .....+.|||.+||.+||.+|
T Consensus       414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R  493 (586)
T KOG0667|consen  414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER  493 (586)
T ss_pred             hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence               0      0 0010000 0                      0000 1112222222 234567999999999999999


Q ss_pred             CCHHHHhcCCCCCCCCCCC
Q 015948          283 ITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       283 ~t~~e~l~hp~~~~~~~~~  301 (397)
                      +|+.|+|+||||+......
T Consensus       494 ~tp~qal~Hpfl~~~~~~~  512 (586)
T KOG0667|consen  494 ITPAQALNHPFLTGTSLER  512 (586)
T ss_pred             CCHHHHhcCcccccccccc
Confidence            9999999999999765543

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.3e-56  Score=392.41  Aligned_cols=290  Identities=44%  Similarity=0.781  Sum_probs=249.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~   85 (397)
                      ...|++.+.||+|.||.||+|..++++.    .||||++...+........+.||+.+++.++||||+.|...|-. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            4679999999999999999997666543    68999998887777888899999999999999999999999866 889


Q ss_pred             EEEEEEccccCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC----CcEEEeeecc
Q 015948           86 LHLVFEFMETDLETVIRNT----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGL  157 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~----~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~----~~~kl~DFG~  157 (397)
                      +++++||++.||+..|+-.    ...++...++.++.||+.|+.|||+++|+||||||.||||..+    |.|||+|||+
T Consensus       103 v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl  182 (438)
T KOG0666|consen  103 VWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL  182 (438)
T ss_pred             EEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence            9999999999999998653    2458999999999999999999999999999999999999887    8999999999


Q ss_pred             ceeeCCCCCc---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---------cHHHHHHHH
Q 015948          158 ARIFGSPDRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---------DIDQLGKIF  225 (397)
Q Consensus       158 a~~~~~~~~~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---------~~~~~~~i~  225 (397)
                      ++.+.++-..   ....+-|.||+|||.++|.+.|+.++|||++|||+.||++-.|.|.+..         ..+++.+|+
T Consensus       183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf  262 (438)
T KOG0666|consen  183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF  262 (438)
T ss_pred             HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence            9998766443   3456679999999999999999999999999999999999999998743         468899999


Q ss_pred             HHhCCCCCCCCCCCCCCccccc-cc-----cccC---CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          226 AAFGTATPSQWPDLAYLPDYVE-YQ-----YVAA---PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      +.+|.+....||++..+|++.. ..     +...   ..+-.....-++.+.+|+.+||++||.+|+|++|+|+|+||..
T Consensus       263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~  342 (438)
T KOG0666|consen  263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTE  342 (438)
T ss_pred             HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccccc
Confidence            9999999999999999988721 11     1111   1111222334677999999999999999999999999999998


Q ss_pred             CCCC
Q 015948          297 APLP  300 (397)
Q Consensus       297 ~~~~  300 (397)
                      .+.|
T Consensus       343 d~lp  346 (438)
T KOG0666|consen  343 DPLP  346 (438)
T ss_pred             CCCC
Confidence            7665

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-55  Score=413.84  Aligned_cols=259  Identities=33%  Similarity=0.493  Sum_probs=228.6

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELK-SPHIIELIDAFPHKG   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~   84 (397)
                      ...++|.+.+.||+|+||+|++|++..+|..||+|++.+....   ......+.+|+.+++.+. ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            5678999999999999999999999999999999977664222   133445668999999999 999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceeeC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFG  162 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~~  162 (397)
                      .+|+|||||. |+|++.+.+ .+++.|..++.+++||+.|++|||++||+||||||+|||++.+ +++||+|||++....
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~  172 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP  172 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence            9999999998 599999998 6679999999999999999999999999999999999999999 999999999999875


Q ss_pred             CCCCcccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .......+.+||+.|+|||++.+.. +.+.++||||+||+||.|++|+.||...+....+..|...-             
T Consensus       173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~-------------  239 (370)
T KOG0583|consen  173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGE-------------  239 (370)
T ss_pred             CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCC-------------
Confidence            4566788899999999999998855 44699999999999999999999999987777777755431             


Q ss_pred             CccccccccccCCCccccCCCC-CHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~-s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                     -.+...+ |.++++||.+||..||.+|+|+.++++||||+.
T Consensus       240 ---------------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  240 ---------------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             ---------------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence                           0122234 899999999999999999999999999999987

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=4.8e-56  Score=415.49  Aligned_cols=256  Identities=32%  Similarity=0.517  Sum_probs=232.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+....+.....+.+|++|++.|+|||||.++++|+...++|+|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            68999999999999999999999999999999999888777667778899999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ||.|+|..++.. ++.++|+.++.++.+++.||.|||+++|+|||+||.|||+..+|.+|+||||+|+..+......+..
T Consensus        82 ~a~g~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi  160 (808)
T KOG0597|consen   82 YAVGDLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI  160 (808)
T ss_pred             hhhhhHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeec
Confidence            999988888775 4569999999999999999999999999999999999999999999999999999998877777888


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      -|||.|||||++.+ ..|+..+|+||||||+|||+.|+|||...+-.+....|...     +..||              
T Consensus       161 kGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d-----~v~~p--------------  220 (808)
T KOG0597|consen  161 KGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD-----PVKPP--------------  220 (808)
T ss_pred             cCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC-----CCCCc--------------
Confidence            89999999999986 77999999999999999999999999988776666666542     22222              


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                               +.+|.++++|+..+|.+||.+|+|..+++.|||++..
T Consensus       221 ---------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  221 ---------STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             ---------ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence                     2568999999999999999999999999999998754

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.4e-55  Score=415.70  Aligned_cols=267  Identities=28%  Similarity=0.450  Sum_probs=237.3

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecC-CccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .....+-|.+.+.||.|+.|.|-+|+|..||+..|||++.+. .........+.+||-||+.+.||||+++||.|+++.+
T Consensus         7 ~~~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~   86 (786)
T KOG0588|consen    7 HKNTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH   86 (786)
T ss_pred             ccccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCce
Confidence            345577899999999999999999999999999999999887 4455566678899999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|+|+||++ |.|++++..++ ++++.++..+++||+.|+.|||..+|+||||||+|+||+..+++||+|||+|... .+
T Consensus        87 lylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe-~~  164 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE-VP  164 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc-cC
Confidence            999999998 67888888755 5999999999999999999999999999999999999999999999999999764 45


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      +....+.||++.|.|||++.|.++.+.++||||.|||||.||+|+.||++.+-...+.++..+.                
T Consensus       165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~----------------  228 (786)
T KOG0588|consen  165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV----------------  228 (786)
T ss_pred             CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc----------------
Confidence            6778889999999999999998888999999999999999999999999877777777776541                


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP  303 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~  303 (397)
                                  -..+..+|.++++||.+||..||++|+|.+||++|||+....-....
T Consensus       229 ------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  229 ------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS  275 (786)
T ss_pred             ------------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence                        12234679999999999999999999999999999999876544433

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-56  Score=387.58  Aligned_cols=252  Identities=28%  Similarity=0.494  Sum_probs=218.1

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEe-eeecCC-
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID-AFPHKG-   84 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~-~~~~~~-   84 (397)
                      .......|+|.++||+|+||+||++++..+|..+|.|.+...............|+.+|++|+|||||++++ .|.++. 
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e   93 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE   93 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence            355567899999999999999999999999999999999877666666777889999999999999999988 554444 


Q ss_pred             eEEEEEEccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHh--CC--ccccCCCCCcEEEccCCcEEEeeec
Q 015948           85 NLHLVFEFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHK--KW--VLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~--~~--ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                      -++||||||+ |||.+.++.   ....++|..+|.++.|++.||.+||+  ..  |+||||||.||+|+.+|.+||+|||
T Consensus        94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG  173 (375)
T KOG0591|consen   94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG  173 (375)
T ss_pred             hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence            4999999999 788887754   45679999999999999999999999  44  9999999999999999999999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      +++.+.+......+.+|||+||+||.+.+ ..|+.++|||||||++|||+.-++||.|.+-...-.+|.++--    ...
T Consensus       174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~----~~~  248 (375)
T KOG0591|consen  174 LGRFLSSKTTFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY----PPL  248 (375)
T ss_pred             hHhHhcchhHHHHhhcCCCcccCHHHHhc-CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC----CCC
Confidence            99999888777888999999999999987 6799999999999999999999999999966666666654310    001


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA  285 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~  285 (397)
                      |+                      ...|.++..+|..|+..||+.||+.
T Consensus       249 p~----------------------~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  249 PD----------------------EHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             cH----------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence            10                      1238999999999999999999985

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.6e-53  Score=398.79  Aligned_cols=287  Identities=42%  Similarity=0.746  Sum_probs=235.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||+||+|++..+++.||||++...... .....+.+|+.+++.++||||+++++++.++...|+||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF   82 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence            47899999999999999999999999999999998754322 22345678999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||+.++|.+.+.+....+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++............
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  162 (303)
T cd07869          83 EYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSN  162 (303)
T ss_pred             ECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCC
Confidence            99999999999887677999999999999999999999999999999999999999999999999999876544444556


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+++.|+|||++.+...++.++|||||||++|+|++|.+||.+..+ .+.+..+...++......|+.....+......
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (303)
T cd07869         163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER  242 (303)
T ss_pred             CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccc
Confidence            67889999999987766789999999999999999999999988655 45667777777766666665543322211111


Q ss_pred             c--ccCCCccccCC--CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          250 Y--VAAPPLRSLFP--SASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       250 ~--~~~~~~~~~~~--~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      +  .....+...+.  ..++++++||.+||+.||++|||++|+++||||.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence            0  11111111111  2467899999999999999999999999999998753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.9e-52  Score=392.66  Aligned_cols=287  Identities=40%  Similarity=0.777  Sum_probs=244.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||+||+|++..+++.||+|.+..... ......+.+|+.+++.++||||+++++++..++..|+||
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   83 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF   83 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence            4789999999999999999999999999999999876543 223345678999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||++++|...+...+..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++............
T Consensus        84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  163 (309)
T cd07872          84 EYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN  163 (309)
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccccc
Confidence            99999999998877777899999999999999999999999999999999999999999999999999876554444455


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....|+.......+..+.+
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (309)
T cd07872         164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNF  243 (309)
T ss_pred             ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhc
Confidence            67788999999987766789999999999999999999999999998899999999988887777776544332222211


Q ss_pred             c--cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          251 V--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       251 ~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      .  .........+.++.++++||.+||..||.+|||++|+++||||....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         244 PKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             CccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            1  11122234466899999999999999999999999999999998643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=3e-52  Score=387.60  Aligned_cols=280  Identities=41%  Similarity=0.751  Sum_probs=234.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEeeee-----c
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFP-----H   82 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~-----~   82 (397)
                      ++|++.+.||+|+||+||+|++.. ++..||+|.+............+.+|+.+++.+   .||||+++++++.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            479999999999999999999865 468899999876655444444566788887776   6999999999874     3


Q ss_pred             CCeEEEEEEccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           83 KGNLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        83 ~~~~~lv~e~~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      ...+++||||++++|..++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T cd07862          81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  160 (290)
T ss_pred             CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence            4579999999999999988764 345899999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ... .......+++.|+|||++.+ ..++.++|||||||++|||++|.+||.+.++.+.+..++...+...+..|+....
T Consensus       161 ~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  238 (290)
T cd07862         161 SFQ-MALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA  238 (290)
T ss_pred             cCC-cccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhc
Confidence            433 33445668899999999976 5689999999999999999999999999999999999999888877777765443


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ++... +......++..+.+.++..+++||.+||+.||++|||+.|+|+||||
T Consensus       239 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         239 LPRQA-FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             ccchh-ccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            33221 12223334455667789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2e-52  Score=388.17  Aligned_cols=282  Identities=37%  Similarity=0.658  Sum_probs=227.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|.+.+.||+|+||+||+|+++.+++.||+|++............+.+|+.+++.++||||++++++|..++.+|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            47999999999999999999999999999999998765544555567889999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Ccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTH  170 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~~~  170 (397)
                      |++++++..+......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... .....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence            99998888877666679999999999999999999999999999999999999999999999999998764332 22334


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..+++.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..+.+..+....+......+......+.......
T Consensus       161 ~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07848         161 YVATRWYRSPELLLG-APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRF  239 (287)
T ss_pred             cccccccCCcHHHcC-CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccccc
Confidence            568889999999976 4589999999999999999999999999888777777666554433221110000000000000


Q ss_pred             c----cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 V----AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 ~----~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .    ...........+|.++.+||.+||+.||++|||++|+|+||||
T Consensus       240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            0    0000112234578999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.5e-54  Score=371.93  Aligned_cols=267  Identities=29%  Similarity=0.490  Sum_probs=235.2

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc------cchHHHHHHHHHhc-CCCCeeEEE
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV------NFTALREIKLLKEL-KSPHIIELI   77 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~------~~~~~~E~~~l~~l-~hp~iv~l~   77 (397)
                      +..+.+.+.|.-.+.||.|..++|-++.++.+|+.+|+|++.........      .+.-.+|+.||+++ .||+|+++.
T Consensus        10 ~aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~   89 (411)
T KOG0599|consen   10 DAAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQ   89 (411)
T ss_pred             hhHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEee
Confidence            45677889999999999999999999999999999999999765432211      12234799999998 699999999


Q ss_pred             eeeecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948           78 DAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        78 ~~~~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                      |.|+.+.++++|+|.|+ |.|.+++.+.- .+++...+.+++||++|+.|||.++||||||||+|||++++.++||+|||
T Consensus        90 D~yes~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   90 DVYESDAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             eeccCcchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc
Confidence            99999999999999999 88999887654 49999999999999999999999999999999999999999999999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhccc-----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLF-----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~-----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      +|+.+.. .......||||.|+|||.+.     +...|+..+|+|++|||+|.|+.|.|||......-.+..|+++--..
T Consensus       169 Fa~~l~~-GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF  247 (411)
T KOG0599|consen  169 FACQLEP-GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQF  247 (411)
T ss_pred             eeeccCC-chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccccc
Confidence            9998854 55778899999999999984     34579999999999999999999999999888888888888876666


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      ....|.|                        +|.+++|||.+||+.||.+|+|++|+|.||||...
T Consensus       248 ~speWad------------------------is~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  248 RSPEWAD------------------------ISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI  289 (411)
T ss_pred             CCcchhh------------------------ccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence            6666654                        48999999999999999999999999999999543

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6e-53  Score=382.66  Aligned_cols=264  Identities=25%  Similarity=0.345  Sum_probs=227.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++++.||.|.-|+||+|+...++..+|+|++.+.... .....++..|-+||+.+.||+++.||..|+.+.+.|+|
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~  155 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV  155 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence            57899999999999999999999999999999999876543 33344566799999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC----
Q 015948           90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS----  163 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~----  163 (397)
                      ||||. |+|..+.+++ +..|++..++.|+.+++.||+|||-.|||+||||||||||.++|+|-|+||.++.....    
T Consensus       156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~  235 (459)
T KOG0610|consen  156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL  235 (459)
T ss_pred             EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence            99999 5777777766 45699999999999999999999999999999999999999999999999998742100    


Q ss_pred             -------------------------------C---------------------CCcccccccCceeeChhcccCccCCCC
Q 015948          164 -------------------------------P---------------------DRRFTHQVFARWYRAPELLFGAKQYGA  191 (397)
Q Consensus       164 -------------------------------~---------------------~~~~~~~~~t~~y~aPE~l~~~~~~~~  191 (397)
                                                     .                     .......+||..|+|||++.| ...+.
T Consensus       236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgs  314 (459)
T KOG0610|consen  236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGS  314 (459)
T ss_pred             eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec-CCCCc
Confidence                                           0                     012235678889999999988 56899


Q ss_pred             cchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHH
Q 015948          192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLL  271 (397)
Q Consensus       192 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li  271 (397)
                      ++|||+||+++|||+.|..||.|.++.+.+..|+..-.     ..                     ...+.+|..++|||
T Consensus       315 AVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l-----~F---------------------p~~~~vs~~akDLI  368 (459)
T KOG0610|consen  315 AVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL-----KF---------------------PEEPEVSSAAKDLI  368 (459)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC-----cC---------------------CCCCcchhHHHHHH
Confidence            99999999999999999999999999999888865311     11                     11125689999999


Q ss_pred             HHhcCcCCCCCCC----HHHHhcCCCCCCCCCCC
Q 015948          272 SKMFTYDPKARIT----AQQALEHRYFSSAPLPT  301 (397)
Q Consensus       272 ~~~L~~dP~~R~t----~~e~l~hp~~~~~~~~~  301 (397)
                      +++|.+||.+|+.    |+||.+||||.++.|.-
T Consensus       369 r~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaL  402 (459)
T KOG0610|consen  369 RKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWAL  402 (459)
T ss_pred             HHHhccChhhhhccccchHHhhcCccccCCChhh
Confidence            9999999999998    99999999999999874

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-53  Score=386.50  Aligned_cols=260  Identities=29%  Similarity=0.497  Sum_probs=213.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC--eEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--NLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~l   88 (397)
                      .-+|...+.||+|+||+||++.+.++|..+|||.+.......  ...+.+|+.+|++|+|||||++++......  .+++
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i   93 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI   93 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence            456889999999999999999999999999999987662211  345778999999999999999999754444  6999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCC---
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGS---  163 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~---  163 (397)
                      +|||+. |+|.+++.+.++.+++..++.|.+||++||.|||++||+||||||+||||+. +|.+||+|||++.....   
T Consensus        94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            999998 6888888876657999999999999999999999999999999999999999 79999999999987753   


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .........||+.|||||++......+.++|||||||++.||+||.+||...  .+....++......            
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~------------  239 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED------------  239 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC------------
Confidence            1233446789999999999985233345999999999999999999999874  22222222211111            


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 ....++..+|.++++||.+||..||++||||+++|+|||..+.
T Consensus       240 -----------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  240 -----------SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             -----------CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence                       1113445679999999999999999999999999999998764

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-53  Score=391.03  Aligned_cols=264  Identities=28%  Similarity=0.429  Sum_probs=222.1

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------------ccchHHHHHHHHHhcCCCCee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------------VNFTALREIKLLKELKSPHII   74 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------------~~~~~~~E~~~l~~l~hp~iv   74 (397)
                      ..+..++|++.+.||+|.||.|.+|++..+++.||||++.+......            ..+...+||.||++|.|||||
T Consensus        92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV  171 (576)
T KOG0585|consen   92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV  171 (576)
T ss_pred             cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence            45678999999999999999999999999999999999976542211            124567899999999999999


Q ss_pred             EEEeeeec--CCeEEEEEEccccCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948           75 ELIDAFPH--KGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        75 ~l~~~~~~--~~~~~lv~e~~~g~L~~~~~~~~~~-l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                      +|+++..+  .+.+|||+|||..+-..+.-. +.. +++.+++.|++.++.||+|||.+|||||||||+|+||+++|++|
T Consensus       172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~-d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK  250 (576)
T KOG0585|consen  172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPP-DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK  250 (576)
T ss_pred             EEEEeecCcccCceEEEEEeccCCccccCCC-CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence            99999855  568999999998443333322 333 89999999999999999999999999999999999999999999


Q ss_pred             EeeeccceeeC-----CCCCcccccccCceeeChhcccCc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015948          152 LADFGLARIFG-----SPDRRFTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGK  223 (397)
Q Consensus       152 l~DFG~a~~~~-----~~~~~~~~~~~t~~y~aPE~l~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  223 (397)
                      |+|||.+..+.     ..+......+|||.|+|||.+.+.   ...+.+.|||||||+||.|+.|+.||.++...+...+
T Consensus       251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K  330 (576)
T KOG0585|consen  251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK  330 (576)
T ss_pred             eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH
Confidence            99999998762     223345568999999999999772   3457889999999999999999999999999999998


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      |.+.--.                          -...+.+.++++|||.+||.+||.+|++..+|..|||....
T Consensus       331 Ivn~pL~--------------------------fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  331 IVNDPLE--------------------------FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             HhcCccc--------------------------CCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            8764111                          11223457899999999999999999999999999998754

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-53  Score=399.75  Aligned_cols=258  Identities=29%  Similarity=0.499  Sum_probs=228.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ...|...++||+|+.|.||.|+...+++.||||.+.+..+..  .+.+++|+.+|+..+|+|||++++.|-.++.+|+||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM  349 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM  349 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence            567999999999999999999999999999999998776543  346789999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++| +|.+.+...  .++|.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+........
T Consensus       350 Eym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~  427 (550)
T KOG0578|consen  350 EYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS  427 (550)
T ss_pred             eecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence            99996 555554433  399999999999999999999999999999999999999999999999999999887777888


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      +.+||++|||||++.. +.|+.++||||||+++.||+-|.|||-..+....+..|... |.+..                
T Consensus       428 TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~l----------------  489 (550)
T KOG0578|consen  428 TMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKL----------------  489 (550)
T ss_pred             cccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCc----------------
Confidence            9999999999999976 78999999999999999999999999988888877777553 22211                


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                              .....+|+.+++||.+||+.|+.+|+++.|+|+||||....
T Consensus       490 --------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~  530 (550)
T KOG0578|consen  490 --------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK  530 (550)
T ss_pred             --------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence                    22346799999999999999999999999999999996543

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=9.4e-52  Score=391.59  Aligned_cols=263  Identities=34%  Similarity=0.543  Sum_probs=234.2

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELK-SPHIIELIDAFPHKG   84 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~   84 (397)
                      ...+.+.|.+.+.||+|.||.||+|+++.+|+.||+|++.+...... ....+.+|+.+|++++ |||||.++++|++..
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~  109 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD  109 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence            45678899999999999999999999999999999999988765432 3456789999999998 999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC----CcEEEeeeccce
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLAR  159 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~----~~~kl~DFG~a~  159 (397)
                      .+|+|||+|. |.|.+.+.+.  .+++..+..+++||+.|++|||+.||+||||||+|+|+...    +.+|++|||++.
T Consensus       110 ~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~  187 (382)
T KOG0032|consen  110 SVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK  187 (382)
T ss_pred             eEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence            9999999999 5888888877  39999999999999999999999999999999999999754    479999999999


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .... .......+||+.|+|||++.. ..|+..+||||+||++|.|++|.+||.+.+.......|..+--...       
T Consensus       188 ~~~~-~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~-------  258 (382)
T KOG0032|consen  188 FIKP-GERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFT-------  258 (382)
T ss_pred             EccC-CceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCC-------
Confidence            8876 667888999999999999975 6799999999999999999999999999998888877766532222       


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                       ...|+.+|..+++||.+||..||.+|+|+.++|+|||+.+.
T Consensus       259 -----------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  259 -----------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             -----------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence                             23445679999999999999999999999999999999875

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-53  Score=360.11  Aligned_cols=256  Identities=27%  Similarity=0.433  Sum_probs=229.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|.+.+.||+|.||.||+|+.++++..||+|++.+... .......+.+|++|...|+||||+++|++|.++..+|+
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            47889999999999999999999999999999999988763 34455567899999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           89 VFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      ++||.. |.++..+..+ ...+++..+..|++|++.||.|||.++++||||||+|+|++..|.+||+|||.+....  ..
T Consensus       100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p--~~  177 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SN  177 (281)
T ss_pred             EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC--CC
Confidence            999998 7888888854 4559999999999999999999999999999999999999999999999999997653  55


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ...+.|||..|.+||+..+ ..++..+|+|++|++.||++.|.+||...+..+.+.+|.+.--                 
T Consensus       178 kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~-----------------  239 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL-----------------  239 (281)
T ss_pred             CceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc-----------------
Confidence            6778999999999999977 6789999999999999999999999999998888888876411                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                 .+...+|.+++|||.+||.++|.+|.+..|++.|||...
T Consensus       240 -----------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  240 -----------KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             -----------cCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence                       122467999999999999999999999999999999753

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.2e-51  Score=404.41  Aligned_cols=280  Identities=34%  Similarity=0.609  Sum_probs=225.1

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-------   82 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-------   82 (397)
                      ..++|.+.+.||+|+||+||+|.+..+++.||||++....      ....+|+.+|+.++||||++++++|..       
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~  137 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE  137 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence            3568999999999999999999999999999999885432      123479999999999999999887633       


Q ss_pred             -CCeEEEEEEccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeecc
Q 015948           83 -KGNLHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGL  157 (397)
Q Consensus        83 -~~~~~lv~e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~  157 (397)
                       ..++++||||+++++...+..   .+..+++..++.++.||+.||+|||++||+||||||+||||+.++ .+||+|||+
T Consensus       138 ~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl  217 (440)
T PTZ00036        138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS  217 (440)
T ss_pred             CceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence             235789999999988777653   345699999999999999999999999999999999999998665 699999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      |+.+.... .....++|+.|+|||++.+...|+.++|||||||++|||++|.+||.+.+..+.+.++...++.+....+.
T Consensus       218 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  296 (440)
T PTZ00036        218 AKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK  296 (440)
T ss_pred             chhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            98764332 23346789999999998876679999999999999999999999999999999999998887765443322


Q ss_pred             CCCCCccccc--cccccCCCccccC-CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          238 DLAYLPDYVE--YQYVAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       238 ~~~~~~~~~~--~~~~~~~~~~~~~-~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ...  +.+..  +.......+...+ ...++++++||.+||++||.+|+|+.|+|+||||....
T Consensus       297 ~~~--~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        297 EMN--PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             Hhc--hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            111  01111  1111112222222 35789999999999999999999999999999997653

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2e-51  Score=390.35  Aligned_cols=286  Identities=38%  Similarity=0.640  Sum_probs=227.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----CeEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----GNLH   87 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~~~~   87 (397)
                      +|++.+.||+|+||.||+|++..+|..||||++............+.+|+.+++.++||||+++++++...     ..+|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            69999999999999999999999999999999875433333334577899999999999999999987432     3589


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--  165 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--  165 (397)
                      +|||||+++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......  
T Consensus        81 lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  159 (338)
T cd07859          81 VVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT  159 (338)
T ss_pred             EEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence            999999999998887644 58999999999999999999999999999999999999999999999999998643221  


Q ss_pred             -CcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 -RRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 -~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                       ......++++.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+...++.+.+..+.......
T Consensus       160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  239 (338)
T cd07859         160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK  239 (338)
T ss_pred             cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence             122456789999999998642 468899999999999999999999999988887777777766654433221111000


Q ss_pred             --cc-cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          244 --DY-VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       244 --~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                        .. .........++...++.+++++.+||.+||+.||++|||++|+++||||.+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence              00 000111122233445677899999999999999999999999999999986443

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=6.2e-51  Score=380.21  Aligned_cols=292  Identities=67%  Similarity=1.151  Sum_probs=254.0

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      +|.+.+.||+|+||.||+|.+..+|+.||||.+......   ......+.+|+.+++.++|+||+++++++.++...|+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            589999999999999999999999999999999866543   23344567899999999999999999999999999999


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |||+.|+|..++......+++..+..++.||+.||.|||++||+|+||||+||+++.+|.++|+|||+++..........
T Consensus        81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~  160 (298)
T cd07841          81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT  160 (298)
T ss_pred             EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccc
Confidence            99998889988876654699999999999999999999999999999999999999999999999999988766554455


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||.+.+...++.++|+|||||++|+|++|.++|.+.++.+.+.++...++......|+.......+....
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T cd07841         161 HQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFK  240 (298)
T ss_pred             ccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccccc
Confidence            55678889999998765678899999999999999999999999999988899998888877777777766666665555


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN  304 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~  304 (397)
                      .....+....+...+..+.+||.+||..||++|||+.|++.|+||.+...++.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~~~  295 (298)
T cd07841         241 PFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTPPS  295 (298)
T ss_pred             ccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCCCC
Confidence            5555556667778899999999999999999999999999999999887766443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6.3e-51  Score=380.92  Aligned_cols=287  Identities=39%  Similarity=0.749  Sum_probs=241.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||.|+||.||+|++..++..||+|.+...... .....+.+|+.+++.++|+||+++++++..++.+|+||
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~   83 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   83 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence            57899999999999999999999999999999998755432 22335678999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||++++|...+......+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++............
T Consensus        84 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (301)
T cd07873          84 EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSN  163 (301)
T ss_pred             eccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccc
Confidence            99999999998877667999999999999999999999999999999999999999999999999999876544444445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++......|+.......+..+..
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (301)
T cd07873         164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNY  243 (301)
T ss_pred             cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccccc
Confidence            56788899999987766688999999999999999999999999888888888888888777777765432221111111


Q ss_pred             --ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          251 --VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       251 --~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                        ..........+.+++++++||.+||+.||.+|||++|+++||||....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         244 PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             CccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence              111112234456789999999999999999999999999999997643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=2.4e-51  Score=380.33  Aligned_cols=282  Identities=47%  Similarity=0.825  Sum_probs=237.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|++.+.||+|+||.||+|++..+|+.||+|.+............+.+|+.+++.++|+||+++++++.+.+.+|+|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            58999999999999999999999999999999976554444455677899999999999999999999999999999999


Q ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948           93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV  172 (397)
Q Consensus        93 ~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~  172 (397)
                      ++++|...+......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..............
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  160 (284)
T cd07839          81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEV  160 (284)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCc
Confidence            99999998887667799999999999999999999999999999999999999999999999999987655544455566


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC-CCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP-FLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      ++..|+|||++.+...++.++|||||||++|+|++|.. +|.+.+..+.+..++..++......|+.....++...+...
T Consensus       161 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd07839         161 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMY  240 (284)
T ss_pred             cccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCC
Confidence            78889999998776668999999999999999998765 46777777888888888777666656544443333222111


Q ss_pred             c-CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          252 A-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       252 ~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      . ...+....+.+++++++||.+||..||.+|||++++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            1 111234456789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=8.5e-51  Score=377.38  Aligned_cols=279  Identities=40%  Similarity=0.758  Sum_probs=231.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEeeeec-----CC
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFPH-----KG   84 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~~-----~~   84 (397)
                      +|++.+.||+|+||+||+|+++.+|+.||+|.+..............+|+.+++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            59999999999999999999999999999999876544444444566788877766   69999999998754     34


Q ss_pred             eEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      .+++||||+.++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~  160 (288)
T cd07863          81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC  160 (288)
T ss_pred             eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence            689999999999988887643 3489999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . .......++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+.++...++......|+.....+
T Consensus       161 ~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07863         161 Q-MALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP  238 (288)
T ss_pred             c-ccCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence            2 22334567888999999976 568999999999999999999999999999889999998888877766666433222


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .. .+............+.++.++.+||.+||+.||++|||+.|++.||||
T Consensus       239 ~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         239 RG-AFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cc-ccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            11 111122233445566789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-51  Score=375.65  Aligned_cols=269  Identities=28%  Similarity=0.383  Sum_probs=224.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+.|++.++||.|..++||+|+.+.++..||||++...+.... ...+.+|+..|+.++||||++++..|..+..+|+||
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            6789999999999999999999999999999999998876655 456789999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-  167 (397)
                      .||. |++++.++.. ...++|..+..+++++++||.|||++|.||||||+.||||+.+|.|||+|||.+..+.+...+ 
T Consensus       104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~  183 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ  183 (516)
T ss_pred             hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence            9998 6888887764 334999999999999999999999999999999999999999999999999987665433322 


Q ss_pred             ---ccccccCceeeChhcc-cCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          168 ---FTHQVFARWYRAPELL-FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       168 ---~~~~~~t~~y~aPE~l-~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                         +.+.+||++|||||++ .....|+.++||||||++..||.+|+.||........+-.-++   ..+|...  ...++
T Consensus       184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq---n~pp~~~--t~~~~  258 (516)
T KOG0582|consen  184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ---NDPPTLL--TSGLD  258 (516)
T ss_pred             eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc---CCCCCcc--cccCC
Confidence               2566899999999994 4456799999999999999999999999998877665544332   2222111  11111


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                   .......+..++.+|..||++||++|||++++|+|+||+...
T Consensus       259 -------------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  259 -------------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK  300 (516)
T ss_pred             -------------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence                         011123467899999999999999999999999999998764

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=5.2e-51  Score=386.17  Aligned_cols=260  Identities=25%  Similarity=0.357  Sum_probs=220.1

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ....++|.+.+.||+|+||+||+|++..+++.||+|++..... .......+.+|+.+++.++||||++++++|.+++.+
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   93 (329)
T PTZ00263         14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRV   93 (329)
T ss_pred             CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEE
Confidence            3346889999999999999999999999999999999976432 222334577899999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||+. |+|...+.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+++......
T Consensus        94 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~  172 (329)
T PTZ00263         94 YFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT  172 (329)
T ss_pred             EEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence            99999998 5777777654 458999999999999999999999999999999999999999999999999998764322


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                         ...+|++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+.....                
T Consensus       173 ---~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~----------------  232 (329)
T PTZ00263        173 ---FTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL----------------  232 (329)
T ss_pred             ---ceecCChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc----------------
Confidence               34578999999999976 5689999999999999999999999988777666655543200                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP  300 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~  300 (397)
                                  .+...++..+++||.+||+.||.+|++     ++++++||||.+..+.
T Consensus       233 ------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~  280 (329)
T PTZ00263        233 ------------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD  280 (329)
T ss_pred             ------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence                        011234789999999999999999997     7999999999875543

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=3.4e-50  Score=377.41  Aligned_cols=294  Identities=43%  Similarity=0.793  Sum_probs=247.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~l   88 (397)
                      .++|.+.+.||.|+||.||+|.+..+|+.||+|.+..............+|+.++++++|+||+++++++...  +.+|+
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            5789999999999999999999999999999999976554444444567899999999999999999998654  57899


Q ss_pred             EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||||++++|..++......+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++..........
T Consensus        86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~  165 (309)
T cd07845          86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM  165 (309)
T ss_pred             EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC
Confidence            99999999998888766679999999999999999999999999999999999999999999999999998876544444


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ....++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++......|++....+....+
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (309)
T cd07845         166 TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF  245 (309)
T ss_pred             CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccc
Confidence            44556788999999977667899999999999999999999999999999999999998888777777766555443322


Q ss_pred             ccc--cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 015948          249 QYV--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN  304 (397)
Q Consensus       249 ~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~  304 (397)
                      ...  ....+...++..++++.+||.+||..||++|||+++++.||||...+++..+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~  303 (309)
T cd07845         246 TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPE  303 (309)
T ss_pred             cccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCC
Confidence            221  11122233445689999999999999999999999999999999877765443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.7e-50  Score=374.70  Aligned_cols=282  Identities=50%  Similarity=0.870  Sum_probs=238.3

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|.+.+.||+|++|.||+|.+..++..||+|++............+.+|+.+++.++||||+++++++.+++.+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            58999999999999999999999999999999876544444445677899999999999999999999999999999999


Q ss_pred             cccCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           93 METDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        93 ~~g~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ++++|...+....  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++............
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (285)
T cd07861          81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH  160 (285)
T ss_pred             CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccC
Confidence            9999988886543  56899999999999999999999999999999999999999999999999999876555444455


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc-c
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-Q  249 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~  249 (397)
                      ..++..|+|||++.+...++.++|+|||||++|+|++|++||.+.+..+.+..+...++......|+....+.++... .
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
T cd07861         161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFP  240 (285)
T ss_pred             CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhcc
Confidence            677888999999877566889999999999999999999999999888888888888877766667655444332211 1


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .............+++++++||.+||..||.+|||+.++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         241 KWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             ccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            111112233345679999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.6e-53  Score=361.79  Aligned_cols=291  Identities=42%  Similarity=0.752  Sum_probs=252.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-------   82 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-------   82 (397)
                      ....|+.+.+||+|.||.||+|+.+++|+.||+|++.....++..-..+++|+++|..|+|+|++.+++.+..       
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r   94 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR   94 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence            4677999999999999999999999999999999988777778888889999999999999999999987743       


Q ss_pred             -CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           83 -KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        83 -~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                       ...+|+||.+|+.||..++-.....++..+++.++.+++.||.|+|++.|+|||+||+|+||+.+|.+||+|||+|+.+
T Consensus        95 ~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen   95 DRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             ccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence             3359999999999999999888888999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCC----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          162 GSPD----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       162 ~~~~----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      ....    ..++..+.|.||++||.++|.+.|+.+.|||..|||+.||++|.|.|.++++..++..|....|..++..||
T Consensus       175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP  254 (376)
T KOG0669|consen  175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP  254 (376)
T ss_pred             ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence            5432    346677889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccccccCC--CccccC-----CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAP--PLRSLF-----PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~--~~~~~~-----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      +...++-+........+  ..+.+.     -.-++++.||+.+||..||.+|+++.+++.|.||...+.|
T Consensus       255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence            98776554433211100  011110     0125789999999999999999999999999999865543

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.1e-50  Score=382.96  Aligned_cols=253  Identities=26%  Similarity=0.390  Sum_probs=213.2

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g-   95 (397)
                      +.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+++.++||||++++++|..++.+|+||||++| 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            479999999999999999999999999976432 222234567899999999999999999999999999999999985 


Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCc
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR  175 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~  175 (397)
                      +|...+.. +..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus        81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  159 (323)
T cd05571          81 ELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP  159 (323)
T ss_pred             cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCc
Confidence            67666655 44689999999999999999999999999999999999999999999999999986544444445567899


Q ss_pred             eeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCC
Q 015948          176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP  255 (397)
Q Consensus       176 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (397)
                      .|+|||++.+ ..++.++|||||||++|||++|..||.+.+.......+...-                           
T Consensus       160 ~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~---------------------------  211 (323)
T cd05571         160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---------------------------  211 (323)
T ss_pred             cccChhhhcC-CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---------------------------
Confidence            9999999976 568999999999999999999999998776655554443210                           


Q ss_pred             ccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948          256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP  300 (397)
Q Consensus       256 ~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~  300 (397)
                       ..+...+++++.+||.+||..||++||     ++.++++||||.+..+.
T Consensus       212 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~  260 (323)
T cd05571         212 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQ  260 (323)
T ss_pred             -CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence             011234589999999999999999999     89999999999886543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-51  Score=378.02  Aligned_cols=278  Identities=30%  Similarity=0.538  Sum_probs=228.7

Q ss_pred             ccChhhh-cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-----C---CCeeE
Q 015948            5 DLSKKVA-DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-----S---PHIIE   75 (397)
Q Consensus         5 ~~~~~~~-~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-----h---p~iv~   75 (397)
                      -+++.+. .||.++++||+|.|+|||+|+|+.+.++||+|+++-   ...+.+.++.||++|++++     |   .+||+
T Consensus        70 ~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~  146 (590)
T KOG1290|consen   70 RIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ  146 (590)
T ss_pred             eccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence            4566676 999999999999999999999999999999999863   3344557889999999983     2   57999


Q ss_pred             EEeeeec----CCeEEEEEEccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEE-----
Q 015948           76 LIDAFPH----KGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLI-----  144 (397)
Q Consensus        76 l~~~~~~----~~~~~lv~e~~~g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl-----  144 (397)
                      |+|.|..    +.++|||+|+++.+|+.+|++.+. .++...+++|++|||.||+|||.+ ||||.||||+|||+     
T Consensus       147 LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~  226 (590)
T KOG1290|consen  147 LLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEI  226 (590)
T ss_pred             eeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecccc
Confidence            9999965    459999999999999999988643 499999999999999999999965 89999999999999     


Q ss_pred             --------------------------------------------------------------------------------
Q 015948          145 --------------------------------------------------------------------------------  144 (397)
Q Consensus       145 --------------------------------------------------------------------------------  144 (397)
                                                                                                      
T Consensus       227 ~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~  306 (590)
T KOG1290|consen  227 DPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNE  306 (590)
T ss_pred             chhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------------c------------------------------------------------
Q 015948          145 -------------------------------G------------------------------------------------  145 (397)
Q Consensus       145 -------------------------------~------------------------------------------------  145 (397)
                                                     .                                                
T Consensus       307 ~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~  386 (590)
T KOG1290|consen  307 PRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPL  386 (590)
T ss_pred             cCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCC
Confidence                                           0                                                


Q ss_pred             --cCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC------Cc
Q 015948          146 --SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS------SD  217 (397)
Q Consensus       146 --~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~------~~  217 (397)
                        .+-+|||+|||.|+++   ...++..+.|+.|+|||++.| ..|++.+||||++|++|||+||..+|...      .+
T Consensus       387 ~~~di~vKIaDlGNACW~---~khFT~DIQTRQYRapEVllG-sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rD  462 (590)
T KOG1290|consen  387 PECDIRVKIADLGNACWV---HKHFTEDIQTRQYRAPEVLLG-SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRD  462 (590)
T ss_pred             CccceeEEEeeccchhhh---hhhhchhhhhhhccCcceeec-CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCcc
Confidence              0013899999999985   556788999999999999999 56999999999999999999999999754      37


Q ss_pred             HHHHHHHHHHhCCCCCC-------------------------CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHH
Q 015948          218 IDQLGKIFAAFGTATPS-------------------------QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLS  272 (397)
Q Consensus       218 ~~~~~~i~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  272 (397)
                      .++++.|++.+|..+..                         .|+....+.+.+.+..           .-..++.+||.
T Consensus       463 EDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~-----------e~A~~fsdFL~  531 (590)
T KOG1290|consen  463 EDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSE-----------EDAQQFSDFLS  531 (590)
T ss_pred             HHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCH-----------HHHHHHHHHHH
Confidence            89999999999875432                         2221111111111111           11356789999


Q ss_pred             HhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          273 KMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       273 ~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      -||+++|++|+||.++|+|||+.....+
T Consensus       532 PmLef~PeKR~tA~~cl~hPwLn~~~~~  559 (590)
T KOG1290|consen  532 PMLEFDPEKRPTAAQCLKHPWLNPVAGP  559 (590)
T ss_pred             HHHhcCccccccHHHHhcCccccCCCCC
Confidence            9999999999999999999999876554

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.9e-50  Score=384.13  Aligned_cols=283  Identities=34%  Similarity=0.548  Sum_probs=224.0

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----   84 (397)
                      .+.++|++.+.||+|+||.||+|++..+|..||+|++............+.+|+.+++.++||||++++++|...+    
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            5689999999999999999999999999999999999765444444556778999999999999999999986543    


Q ss_pred             --eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           85 --NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        85 --~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                        .+|+||||++++|...+..   .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus        98 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876          98 FQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC  174 (359)
T ss_pred             cceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence              5799999999998887753   38899999999999999999999999999999999999999999999999997653


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC-
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY-  241 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-  241 (397)
                      . ........+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.+....+..... 
T Consensus       175 ~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (359)
T cd07876         175 T-NFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT  252 (359)
T ss_pred             c-CccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence            3 223345678889999999976 5689999999999999999999999999888877777776665433211100000 


Q ss_pred             -------Cccccc------cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          242 -------LPDYVE------YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       242 -------~~~~~~------~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                             .+....      +.....+.........+.++++||.+||..||++|||+.|+|+||||..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                   000000      0000000111112234788999999999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-51  Score=386.11  Aligned_cols=257  Identities=28%  Similarity=0.478  Sum_probs=237.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe-EEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN-LHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~-~~lv   89 (397)
                      .++|.+++++|+|+||.+++++++..++.|++|.+......+.....+.+|+.+++++.|||||.+.+.|..++. +|||
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            468999999999999999999999999999999999988887777788999999999999999999999999888 9999


Q ss_pred             EEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |+||+ |++.+.+.+++ ..++++.+..|+.||+.|+.|||+++|+|||||+.||+++.++.|||+|||+|+.++.....
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~  162 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL  162 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence            99999 58888887776 67999999999999999999999999999999999999999999999999999999887778


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ..+.+||+.||+||++.+ .+|+.++|||||||++|||++-++.|.+.+-.....+|+.....+.+.             
T Consensus       163 a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~-------------  228 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPS-------------  228 (426)
T ss_pred             hheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCc-------------
Confidence            888999999999999987 789999999999999999999999999999999999998876444333             


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                                    ..|.+++.+|..||..+|..||++.++|.+|...
T Consensus       229 --------------~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  229 --------------MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             --------------cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence                          3489999999999999999999999999998764

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=2e-50  Score=374.62  Aligned_cols=263  Identities=24%  Similarity=0.364  Sum_probs=216.9

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .|.+.+.||+|+||+||+|.+..+|+.||+|.+....... .....+.+|+.+++.++|+||++++++|.+++.+|+|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            3889999999999999999999999999999987654322 223356789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |+. |+|...+... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ....
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~  159 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-ETVR  159 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-Ceec
Confidence            998 5777666543 345899999999999999999999999999999999999999999999999999875332 2334


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+|+..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+........                 
T Consensus       160 ~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------------  221 (285)
T cd05631         160 GRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ-----------------  221 (285)
T ss_pred             CCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc-----------------
Confidence            5678999999999976 5689999999999999999999999987765443333333221110                 


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPT  301 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~  301 (397)
                             ..+...++.++.+||.+||+.||.+|++     ++++++||||.+..+..
T Consensus       222 -------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~  271 (285)
T cd05631         222 -------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKR  271 (285)
T ss_pred             -------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHH
Confidence                   1122345899999999999999999997     89999999998866543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-51  Score=378.12  Aligned_cols=256  Identities=26%  Similarity=0.343  Sum_probs=217.9

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.++..+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            4799999999999999999999999999999998754321 223345678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||+. |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......   ..
T Consensus        81 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---~~  156 (291)
T cd05612          81 EYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---TW  156 (291)
T ss_pred             eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---cc
Confidence            9998 5788877654 45899999999999999999999999999999999999999999999999999876432   23


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+...-.                    
T Consensus       157 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--------------------  215 (291)
T cd05612         157 TLCGTPEYLAPEVIQS-KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL--------------------  215 (291)
T ss_pred             cccCChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc--------------------
Confidence            4568899999999876 5689999999999999999999999998877666666543210                    


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP  300 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~  300 (397)
                              .+...++..+++||.+||+.||.+|++     ++++++||||....+.
T Consensus       216 --------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~  263 (291)
T cd05612         216 --------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD  263 (291)
T ss_pred             --------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence                    112234789999999999999999995     9999999999876553

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=8.5e-51  Score=391.24  Aligned_cols=286  Identities=34%  Similarity=0.575  Sum_probs=230.3

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----eEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NLH   87 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----~~~   87 (397)
                      +|.+.+.||+|+||+||+|.+..+|+.||||++............+.+|+.+|+.++|+||+++++++....     .+|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            478999999999999999999999999999998654333233346778999999999999999999998776     899


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-C
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-R  166 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~  166 (397)
                      +||||+.++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... .
T Consensus        81 lv~e~~~~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~  159 (372)
T cd07853          81 VVTELMQSDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK  159 (372)
T ss_pred             EEeeccccCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence            99999999998888654 459999999999999999999999999999999999999999999999999998754332 2


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC-ccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL-PDY  245 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~  245 (397)
                      ......+++.|+|||++.+...++.++|||||||++|||++|++||.+.+..+++..+...++.+....+...... ...
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~  239 (372)
T cd07853         160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH  239 (372)
T ss_pred             cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence            2344567889999999987667899999999999999999999999999999999998888776554322111000 000


Q ss_pred             cccccccCCC---ccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          246 VEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       246 ~~~~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ........+.   ...+....++++.+||.+||+.||++|||+.|+|+||||.....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~  296 (372)
T cd07853         240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRL  296 (372)
T ss_pred             HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCcc
Confidence            0000000111   11223456899999999999999999999999999999987543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.2e-50  Score=388.49  Aligned_cols=279  Identities=25%  Similarity=0.326  Sum_probs=218.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||.||+|++..+++.||+|....        ..+.+|+.+|++++||||++++++|..+...|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~  162 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL  162 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence            3679999999999999999999999999999997431        24568999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC-CCccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP-DRRFT  169 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~-~~~~~  169 (397)
                      |++.++|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..... .....
T Consensus       163 e~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~  241 (391)
T PHA03212        163 PRYKTDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY  241 (391)
T ss_pred             ecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence            999999988887653 5899999999999999999999999999999999999999999999999999754322 22334


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC-------CcHHHHHHHHHHhCCCCCCCCCCCC-C
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-------SDIDQLGKIFAAFGTATPSQWPDLA-Y  241 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~-~  241 (397)
                      ..+||+.|+|||++.+ ..++.++|||||||++|||++|..||...       ....++..++...+..+.....+.. .
T Consensus       242 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~  320 (391)
T PHA03212        242 GWAGTIATNAPELLAR-DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN  320 (391)
T ss_pred             cccCccCCCChhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence            5678999999999976 56899999999999999999998665432       2345666677766654322111100 0


Q ss_pred             Ccccc-c--cccccCCCcc---ccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          242 LPDYV-E--YQYVAAPPLR---SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       242 ~~~~~-~--~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      +.... .  ......+..+   .....++.++.+||.+||++||.+|||++|+|+||||...+.
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~  384 (391)
T PHA03212        321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD  384 (391)
T ss_pred             HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence            00000 0  0000000000   111235678999999999999999999999999999987543

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=5.9e-50  Score=384.09  Aligned_cols=263  Identities=25%  Similarity=0.369  Sum_probs=215.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|++.+.||+|+||+||+|++..+++.||||++.+.... ......+.+|+.++..++|+||+++++.|.+...+|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            5799999999999999999999999999999999764322 223345678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC---
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR---  166 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~---  166 (397)
                      |||+ |+|...+.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+++.+.....   
T Consensus        81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~  159 (363)
T cd05628          81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF  159 (363)
T ss_pred             cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence            9998 4777777654 4599999999999999999999999999999999999999999999999999875432110   


Q ss_pred             --------------------------------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 015948          167 --------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG  214 (397)
Q Consensus       167 --------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  214 (397)
                                                      .....+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence                                            0124578999999999976 5689999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCC---CCCCHHHHhcC
Q 015948          215 SSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPK---ARITAQQALEH  291 (397)
Q Consensus       215 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~---~R~t~~e~l~h  291 (397)
                      .+..+...++........   .                 ++    ...+++++++||.+|+. +|.   .||+++|+++|
T Consensus       239 ~~~~~~~~~i~~~~~~~~---~-----------------p~----~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         239 ETPQETYKKVMNWKETLI---F-----------------PP----EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             CCHHHHHHHHHcCcCccc---C-----------------CC----cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence            887776666654211000   0                 00    01358999999999775 555   45899999999


Q ss_pred             CCCCCCCCCC
Q 015948          292 RYFSSAPLPT  301 (397)
Q Consensus       292 p~~~~~~~~~  301 (397)
                      |||.+..+..
T Consensus       294 p~f~~~~~~~  303 (363)
T cd05628         294 PFFEGVDWEH  303 (363)
T ss_pred             CCCCCCCHHH
Confidence            9999876543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.9e-50  Score=382.61  Aligned_cols=264  Identities=26%  Similarity=0.358  Sum_probs=221.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||+||+|++..+|+.||+|++..... .......+.+|+.+++.++|+||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            479999999999999999999999999999999986543 2223345668999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~  168 (397)
                      ||++ |+|.+++.+....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..+..... ..
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~  160 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS  160 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence            9997 688888877656799999999999999999999999999999999999999999999999999987654332 22


Q ss_pred             cccccCceeeChhcccC-----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          169 THQVFARWYRAPELLFG-----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      ....||+.|+|||++..     ...++.++|||||||++|+|++|..||...+....+..+......   ..++      
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~------  231 (330)
T cd05601         161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF---LKFP------  231 (330)
T ss_pred             ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc---cCCC------
Confidence            34568899999999863     345789999999999999999999999988777766666542110   0000      


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                                     ..+.++.++.+||.+||. ||++|||++++++||||....+.
T Consensus       232 ---------------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~  272 (330)
T cd05601         232 ---------------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWN  272 (330)
T ss_pred             ---------------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHH
Confidence                           113468999999999998 99999999999999999876543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-51  Score=372.77  Aligned_cols=257  Identities=29%  Similarity=0.516  Sum_probs=228.4

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ..+.-+|++.+.||+|.||.|-+|++...|+.||||.|++.+.+. .....+.+||+||..|+||||+.+|+.|++.+.+
T Consensus        49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI  128 (668)
T KOG0611|consen   49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI  128 (668)
T ss_pred             cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence            456789999999999999999999999999999999999887544 3445678999999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      .|||||.. |+|++++.+++ .|++.+++.+++||..|+.|||+++++|||||.+|||+|.++++||+|||++..+.. .
T Consensus       129 vivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~-~  206 (668)
T KOG0611|consen  129 VIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD-K  206 (668)
T ss_pred             EEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc-c
Confidence            99999998 68999888765 599999999999999999999999999999999999999999999999999987744 5


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ....+.||++.|.+||++.|..+-+..+|.|||||+||.|+.|..||+|.+......+|-.+--..              
T Consensus       207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE--------------  272 (668)
T KOG0611|consen  207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE--------------  272 (668)
T ss_pred             cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC--------------
Confidence            677889999999999999997777999999999999999999999999998877777775441111              


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                                     |.-+.++.-||+.||..||++|.|+++|-.|=|..
T Consensus       273 ---------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  273 ---------------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             ---------------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence                           12256789999999999999999999999996653

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=9.5e-50  Score=382.88  Aligned_cols=284  Identities=33%  Similarity=0.547  Sum_probs=227.9

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----   83 (397)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|...     
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            467899999999999999999999999999999999876544444445677899999999999999999987543     


Q ss_pred             -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                       ..+|+||||++++|...+..   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       101 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         101 FQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             cCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence             36899999999999888754   37899999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .. .......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..++..++.+.+..+......
T Consensus       178 ~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (364)
T cd07875         178 TS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  255 (364)
T ss_pred             CC-CcccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence            32 23345678899999999976 56899999999999999999999999999998888888887776554322221100


Q ss_pred             --------cccccc------ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 --------PDYVEY------QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 --------~~~~~~------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                              +.+..+      .....+.........+..+++||.+||+.||.+|||+.|+|+||||...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~  324 (364)
T cd07875         256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  324 (364)
T ss_pred             HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence                    000000      0000011111122346789999999999999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.6e-50  Score=384.02  Aligned_cols=261  Identities=26%  Similarity=0.417  Sum_probs=215.7

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|++.+.||+|+||+||+|++..+|+.||||++...... ......+.+|+.+|+.++||||++++++|.+++++|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4799999999999999999999999999999999764322 223345678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC---
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR---  166 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~---  166 (397)
                      |||. |+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..+.....   
T Consensus        81 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  159 (364)
T cd05599          81 EYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF  159 (364)
T ss_pred             CCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence            9998 5677777654 4599999999999999999999999999999999999999999999999999876432110   


Q ss_pred             -----------------------------------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCC
Q 015948          167 -----------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPF  211 (397)
Q Consensus       167 -----------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~p  211 (397)
                                                         .....+||+.|+|||++.+ ..++.++|||||||++|||++|.+|
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~P  238 (364)
T cd05599         160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPP  238 (364)
T ss_pred             cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCC
Confidence                                               1113468999999999876 5689999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHH
Q 015948          212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQA  288 (397)
Q Consensus       212 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~  288 (397)
                      |.+.+..+....+.......   ..+                     ....+++++++||.+||. +|.+|++   ++|+
T Consensus       239 f~~~~~~~~~~~i~~~~~~~---~~~---------------------~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l  293 (364)
T cd05599         239 FCSDNPQETYRKIINWKETL---QFP---------------------DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI  293 (364)
T ss_pred             CCCCCHHHHHHHHHcCCCcc---CCC---------------------CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence            99887766665554321000   000                     001358999999999997 9999998   9999


Q ss_pred             hcCCCCCCCCC
Q 015948          289 LEHRYFSSAPL  299 (397)
Q Consensus       289 l~hp~~~~~~~  299 (397)
                      ++||||....+
T Consensus       294 l~h~~~~~~~~  304 (364)
T cd05599         294 KSHPFFKGVDW  304 (364)
T ss_pred             hcCCCcCCCCH
Confidence            99999987654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-51  Score=378.48  Aligned_cols=263  Identities=28%  Similarity=0.455  Sum_probs=239.5

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++.+-|.+.+.||+|.|++|.+|+|--+|..||||++.+.+........+++|+..|+.++|||||+||+....+..+|
T Consensus        14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKly   93 (864)
T KOG4717|consen   14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLY   93 (864)
T ss_pred             cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEE
Confidence            45788899999999999999999999999999999999998887777778899999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc-cCCcEEEeeeccceeeCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~-~~~~~kl~DFG~a~~~~~~~  165 (397)
                      +|+|+-. |+|.++|.+....+.|..++.|++||+.|+.|||+..+|||||||+||.+- .-|-+||+|||++..+. +.
T Consensus        94 LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-PG  172 (864)
T KOG4717|consen   94 LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-PG  172 (864)
T ss_pred             EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-Cc
Confidence            9999988 699999999988899999999999999999999999999999999998765 56899999999998874 45


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ....+.||+..|.|||+|+|..+..+++||||||||||-|++|++||+..++.+.+-.|+.+-                 
T Consensus       173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK-----------------  235 (864)
T KOG4717|consen  173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK-----------------  235 (864)
T ss_pred             chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc-----------------
Confidence            677889999999999999997777789999999999999999999999999999988887641                 


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                                 ...+..+|.++++||..||..||++|.+.+||..|+|++....
T Consensus       236 -----------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  236 -----------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             -----------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence                       1223456999999999999999999999999999999987643

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=6.4e-50  Score=386.23  Aligned_cols=262  Identities=26%  Similarity=0.360  Sum_probs=212.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .|++++.||+|+||+||+|++..+++.||||++..... .......+.+|+.+++.++|+||++++++|.+.+++|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            58999999999999999999999999999999976432 22333457789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-----
Q 015948           92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-----  165 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-----  165 (397)
                      ||+ |+|..++.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.+|++||+|||++..+....     
T Consensus        82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~  160 (381)
T cd05626          82 YIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY  160 (381)
T ss_pred             cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence            998 5777777654 458999999999999999999999999999999999999999999999999976431100     


Q ss_pred             ------------------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHH
Q 015948          166 ------------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFA  203 (397)
Q Consensus       166 ------------------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~  203 (397)
                                                                ......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~  239 (381)
T cd05626         161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILF  239 (381)
T ss_pred             cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHHH
Confidence                                                      00123578999999999976 56899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCc--CCCC
Q 015948          204 ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTY--DPKA  281 (397)
Q Consensus       204 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~--dP~~  281 (397)
                      ||++|.+||...+..+....+.......   .+                     .....+++++++||.+||..  ++..
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~---------------------~~~~~~s~~~~dli~~ll~~~~~~~~  295 (381)
T cd05626         240 EMLVGQPPFLAPTPTETQLKVINWENTL---HI---------------------PPQVKLSPEAVDLITKLCCSAEERLG  295 (381)
T ss_pred             HHHhCCCCCcCCCHHHHHHHHHcccccc---CC---------------------CCCCCCCHHHHHHHHHHccCcccccC
Confidence            9999999998877665555543211100   00                     01124589999999996644  5555


Q ss_pred             CCCHHHHhcCCCCCCCCCC
Q 015948          282 RITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       282 R~t~~e~l~hp~~~~~~~~  300 (397)
                      |++++++++||||....+.
T Consensus       296 R~~~~~~l~hp~f~~~~~~  314 (381)
T cd05626         296 RNGADDIKAHPFFSEVDFS  314 (381)
T ss_pred             CCCHHHHhcCcccCCCChh
Confidence            9999999999999876553

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.1e-50  Score=383.23  Aligned_cols=284  Identities=35%  Similarity=0.611  Sum_probs=228.6

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----   83 (397)
                      .+.++|.+.+.||+|+||+||+|.+..+++.||||++............+.+|+.+|+.++|+||++++++|...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            467899999999999999999999999999999999875443333334567899999999999999999988543     


Q ss_pred             -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                       ..+|+++|+++++|...+...  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        92 ~~~~~~~~~~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~  169 (343)
T cd07878          92 FNEVYLVTNLMGADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD  169 (343)
T ss_pred             cCcEEEEeecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence             357999999988988777543  49999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .   .....++++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+...+..+.....-
T Consensus       170 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T cd07878         170 D---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE  246 (343)
T ss_pred             C---CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence            3   2345578999999999987667899999999999999999999999998888888888777665443222111000


Q ss_pred             cc--cc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 PD--YV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 ~~--~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      ..  +. .........+...+...++.+.+||.+||..||.+|||+.|+|+||||...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         247 HARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             hHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence            00  00 000111122333445668889999999999999999999999999999764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.7e-49  Score=379.86  Aligned_cols=284  Identities=33%  Similarity=0.542  Sum_probs=226.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----   83 (397)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            468999999999999999999999999999999999876544444445677899999999999999999988543     


Q ss_pred             -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                       ..+|+||||+++++...+..   .+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++...
T Consensus        94 ~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874          94 FQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_pred             cceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence             35799999999998887754   38899999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .. .......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....++..++...+..+......
T Consensus       171 ~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (355)
T cd07874         171 TS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT  248 (355)
T ss_pred             Cc-cccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence            32 23345678899999999976 56899999999999999999999999998888888887777665544322211100


Q ss_pred             --------cccccc------ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 --------PDYVEY------QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 --------~~~~~~------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                              +.+...      .....+.........+.++++||.+||..||++|||+.|+|+||||...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence                    000000      0000011111223346789999999999999999999999999999743

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=2e-49  Score=374.58  Aligned_cols=255  Identities=24%  Similarity=0.381  Sum_probs=212.7

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHH---HhcCCCCeeEEEeeeecCCeEEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLL---KELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l---~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      |.+.+.||+|+||.||+|.+..+|+.||||++.+.... ......+.+|+.++   +.++||||++++++|.+++++|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            78899999999999999999999999999999764321 22233455666554   566899999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||++| +|...+..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus        81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05589          81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRT  158 (324)
T ss_pred             EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcc
Confidence            999995 66666543  358999999999999999999999999999999999999999999999999987644333444


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.....                   
T Consensus       159 ~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~-------------------  218 (324)
T cd05589         159 STFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV-------------------  218 (324)
T ss_pred             cccccCccccCHhHhcC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-------------------
Confidence            55678999999999976 5689999999999999999999999998877766666543210                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                               .....++.++.+||.+||+.||.+||     ++.++++||||.+..+
T Consensus       219 ---------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~  265 (324)
T cd05589         219 ---------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW  265 (324)
T ss_pred             ---------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence                     11134589999999999999999999     7999999999987654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=2.4e-49  Score=368.92  Aligned_cols=284  Identities=46%  Similarity=0.803  Sum_probs=239.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCe-----
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGN-----   85 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~-----   85 (397)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|++............+.+|+.+++.+. |+||+++++++.....     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            5799999999999999999999999999999998766544444556788999999995 5999999999876665     


Q ss_pred             EEEEEEccccCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeecccee
Q 015948           86 LHLVFEFMETDLETVIRNTN----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARI  160 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~  160 (397)
                      .|+||||++++|..++....    ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++..
T Consensus        81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~  160 (295)
T cd07837          81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA  160 (295)
T ss_pred             EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence            89999999999988886542    35899999999999999999999999999999999999998 88999999999987


Q ss_pred             eCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      +...........+++.|+|||++.+...++.++|+|||||++|+|++|.+||.+.++...+..++..++......|+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T cd07837         161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS  240 (295)
T ss_pred             cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence            65544445556678889999998766678999999999999999999999999999988888888887776666666554


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                      .......+............+.++..+.+||.+||..||.+||++.|++.||||.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            4444333332223333444567899999999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.3e-50  Score=381.62  Aligned_cols=262  Identities=29%  Similarity=0.456  Sum_probs=221.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||+||+|++..+|+.||||++....... .....+.+|+.++..++|+||++++++|.+++++|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            57999999999999999999999999999999997653222 33445678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----  165 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----  165 (397)
                      ||+. |+|..++.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++.......    
T Consensus        81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~  159 (350)
T cd05573          81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY  159 (350)
T ss_pred             cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence            9997 5788887765 569999999999999999999999999999999999999999999999999998765433    


Q ss_pred             -------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015948          166 -------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ  220 (397)
Q Consensus       166 -------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  220 (397)
                                               .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~  238 (350)
T cd05573         160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET  238 (350)
T ss_pred             cccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence                                     23345678999999999977 5789999999999999999999999998887666


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-HHHHhcCCCCCCCCC
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-AQQALEHRYFSSAPL  299 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-~~e~l~hp~~~~~~~  299 (397)
                      ..++.........                        .....+++++.+||.+||. ||.+|++ ++++++||||....+
T Consensus       239 ~~~i~~~~~~~~~------------------------p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~  293 (350)
T cd05573         239 YNKIINWKESLRF------------------------PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDW  293 (350)
T ss_pred             HHHHhccCCcccC------------------------CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCH
Confidence            6665442111000                        0011258999999999997 9999999 999999999987655


Q ss_pred             C
Q 015948          300 P  300 (397)
Q Consensus       300 ~  300 (397)
                      .
T Consensus       294 ~  294 (350)
T cd05573         294 E  294 (350)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.7e-49  Score=366.68  Aligned_cols=283  Identities=49%  Similarity=0.910  Sum_probs=244.3

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|.+.+.||.|+||.||+|.+..+|..||+|++............+.+|+.++++++|+||+++++++..+..+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            58999999999999999999999999999999987654444455688999999999999999999999999999999999


Q ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Cccccc
Q 015948           93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQ  171 (397)
Q Consensus        93 ~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~~~~  171 (397)
                      ++++|...+......+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....... ......
T Consensus        81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  160 (286)
T cd07832          81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ  160 (286)
T ss_pred             cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccc
Confidence            9779999888766779999999999999999999999999999999999999999999999999998765433 234456


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      .++.+|+|||++.+...++.++|||||||++|+|++|.++|.+.++...+..+...++...+..|+....+.++....+.
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07832         161 VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFP  240 (286)
T ss_pred             cCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCC
Confidence            78889999999877666799999999999999999999999999999999999998888877777766555444332222


Q ss_pred             cC--CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          252 AA--PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       252 ~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                      ..  ..+...++..+.++.+||.+||..||.+|||++++++||||.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         241 ESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            22  223455667789999999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=6.1e-50  Score=380.10  Aligned_cols=258  Identities=24%  Similarity=0.332  Sum_probs=218.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCC-cEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      -.++|.+.+.||+|+||.||+|.+..++ ..||+|++..... .......+.+|+.+++.++||||++++++|.+.+.+|
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            3678999999999999999999876655 6899999875432 2223345678999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||+. |+|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......  
T Consensus       108 lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~--  184 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR--  184 (340)
T ss_pred             EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC--
Confidence            9999997 5777777654 45899999999999999999999999999999999999999999999999999876432  


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                       ....+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.......+.....                 
T Consensus       185 -~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~-----------------  245 (340)
T PTZ00426        185 -TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII-----------------  245 (340)
T ss_pred             -cceecCChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-----------------
Confidence             234678999999999976 5689999999999999999999999998877666666543210                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP  300 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~  300 (397)
                                 .+.+.+++.+.+||.+||+.||++|+     +++++++||||.+..+.
T Consensus       246 -----------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~  293 (340)
T PTZ00426        246 -----------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWV  293 (340)
T ss_pred             -----------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence                       11234588999999999999999995     89999999999876543

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=5.8e-50  Score=386.76  Aligned_cols=261  Identities=25%  Similarity=0.365  Sum_probs=213.9

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      +|++.+.||+|+||+||+|++..+++.||+|++.+... .......+.+|+.+++.++|+||+++++.|.+++.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            69999999999999999999999999999999875432 22233456789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-----
Q 015948           92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-----  165 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-----  165 (397)
                      ||+ |+|...+.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.+....     
T Consensus        82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~  160 (382)
T cd05625          82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (382)
T ss_pred             CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence            998 5788777654 458999999999999999999999999999999999999999999999999975321000     


Q ss_pred             ------------------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHH
Q 015948          166 ------------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFA  203 (397)
Q Consensus       166 ------------------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~  203 (397)
                                                                ......+||+.|+|||++.+ ..|+.++|||||||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~  239 (382)
T cd05625         161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILY  239 (382)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHH
Confidence                                                      00123468999999999976 56899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC
Q 015948          204 ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI  283 (397)
Q Consensus       204 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  283 (397)
                      ||++|++||.+.+..+....+.......   ..                     .....+++++.+||.+|+ .+|.+|+
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~---------------------p~~~~~s~~~~~li~~l~-~~p~~R~  294 (382)
T cd05625         240 EMLVGQPPFLAQTPLETQMKVINWQTSL---HI---------------------PPQAKLSPEASDLIIKLC-RGPEDRL  294 (382)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHccCCCc---CC---------------------CCcccCCHHHHHHHHHHc-cCHhHcC
Confidence            9999999999887766655554321100   00                     011345899999999987 5999999


Q ss_pred             C---HHHHhcCCCCCCCCCC
Q 015948          284 T---AQQALEHRYFSSAPLP  300 (397)
Q Consensus       284 t---~~e~l~hp~~~~~~~~  300 (397)
                      +   ++++++||||....+.
T Consensus       295 ~~~~~~ei~~hp~f~~~~~~  314 (382)
T cd05625         295 GKNGADEIKAHPFFKTIDFS  314 (382)
T ss_pred             CCCCHHHHhcCCCcCCcChH
Confidence            7   9999999999876543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2.6e-49  Score=373.10  Aligned_cols=252  Identities=27%  Similarity=0.390  Sum_probs=212.1

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||+||+|+++.+++.||||++.+... .......+.+|+.++..+ +||||++++++|...+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999999999999999976432 223334566788888876 699999999999999999999999985


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.............||
T Consensus        81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  159 (320)
T cd05590          81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGT  159 (320)
T ss_pred             chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccC
Confidence             777666554 459999999999999999999999999999999999999999999999999988654333444556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....                         
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~-------------------------  213 (320)
T cd05590         160 PDYIAPEILQE-MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-------------------------  213 (320)
T ss_pred             ccccCHHHHcC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC-------------------------
Confidence            99999999976 5689999999999999999999999998887776666543210                         


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCH------HHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITA------QQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~------~e~l~hp~~~~~~~  299 (397)
                         .....++.++++||.+||+.||++|+++      +++++||||....+
T Consensus       214 ---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~  261 (320)
T cd05590         214 ---VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW  261 (320)
T ss_pred             ---CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence               1112358899999999999999999998      99999999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-49  Score=383.39  Aligned_cols=261  Identities=28%  Similarity=0.401  Sum_probs=213.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||+||+|.+..+++.||||++.+... .......+.+|+.+++.++||||++++++|.+..++|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            579999999999999999999999999999999875432 2222345678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC---
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR---  166 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~---  166 (397)
                      |||+ |+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....   
T Consensus        81 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~  159 (377)
T cd05629          81 EFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY  159 (377)
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence            9998 5787777654 4589999999999999999999999999999999999999999999999999964311000   


Q ss_pred             --------------------------------------------cccccccCceeeChhcccCccCCCCcchHHHHHHHH
Q 015948          167 --------------------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIF  202 (397)
Q Consensus       167 --------------------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il  202 (397)
                                                                  .....+||+.|+|||++.+ ..++.++|||||||++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  238 (377)
T cd05629         160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIM  238 (377)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchhh
Confidence                                                        0012468999999999976 5689999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCC
Q 015948          203 AELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR  282 (397)
Q Consensus       203 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  282 (397)
                      |||++|.+||.+.+..+.+..+......   -.+++                     ...++.++++||.+||. +|.+|
T Consensus       239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p~---------------------~~~~s~~~~dli~~lL~-~~~~r  293 (377)
T cd05629         239 FECLIGWPPFCSENSHETYRKIINWRET---LYFPD---------------------DIHLSVEAEDLIRRLIT-NAENR  293 (377)
T ss_pred             hhhhcCCCCCCCCCHHHHHHHHHccCCc---cCCCC---------------------CCCCCHHHHHHHHHHhc-CHhhc
Confidence            9999999999988776666655432100   00110                     11358899999999998 77765


Q ss_pred             ---CCHHHHhcCCCCCCCCC
Q 015948          283 ---ITAQQALEHRYFSSAPL  299 (397)
Q Consensus       283 ---~t~~e~l~hp~~~~~~~  299 (397)
                         +++.|++.||||.+..+
T Consensus       294 ~~r~~~~~~l~hp~~~~~~~  313 (377)
T cd05629         294 LGRGGAHEIKSHPFFRGVDW  313 (377)
T ss_pred             CCCCCHHHHhcCCCcCCCCH
Confidence               59999999999987554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.9e-49  Score=373.57  Aligned_cols=274  Identities=38%  Similarity=0.699  Sum_probs=215.4

Q ss_pred             eeeeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeEEEEEEc
Q 015948           17 REVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHLVFEF   92 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~lv~e~   92 (397)
                      .++||+|+||+||+|+++  .+++.||+|.+....    ....+.+|+.+|+.++||||++++++|..  +..+|+||||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY   81 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence            468999999999999865  467899999986432    23356789999999999999999999844  5678999999


Q ss_pred             cccCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE----ccCCcEEEeeecccee
Q 015948           93 METDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARI  160 (397)
Q Consensus        93 ~~g~L~~~~~~~--------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl----~~~~~~kl~DFG~a~~  160 (397)
                      ++++|...+...        ...+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+++.
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07868          82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence            999998887542        2248999999999999999999999999999999999999    4567899999999987


Q ss_pred             eCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---------HHHHHHHHHHh
Q 015948          161 FGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---------IDQLGKIFAAF  228 (397)
Q Consensus       161 ~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---------~~~~~~i~~~~  228 (397)
                      ......   .....++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+...         .+.+..++..+
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  241 (317)
T cd07868         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM  241 (317)
T ss_pred             cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence            654322   234567899999999998766789999999999999999999999976543         46677788887


Q ss_pred             CCCCCCCCCCCCCCccccccc------cccCC----CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          229 GTATPSQWPDLAYLPDYVEYQ------YVAAP----PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~------~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      +.+....|.+....+......      .....    .+.......+.++.+||.+||+.||.+|||++|+|+||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            777666665543332211100      00000    0111112346789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-49  Score=377.81  Aligned_cols=263  Identities=28%  Similarity=0.407  Sum_probs=219.6

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||.||+|++..+++.||||++.+.... ......+.+|+.+++.++||||+++++++.+.+++|+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            4799999999999999999999999999999999765322 223345678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++ |+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....   ...
T Consensus        81 e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~  156 (333)
T cd05600          81 EYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YAN  156 (333)
T ss_pred             eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccC
Confidence            9998 5777777654 4589999999999999999999999999999999999999999999999999986543   334


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+|++.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+..+....+.........                
T Consensus       157 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~----------------  219 (333)
T cd05600         157 SVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR----------------  219 (333)
T ss_pred             CcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC----------------
Confidence            5678999999999977 47899999999999999999999999988777666655432111000                


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                          +........+++++.+||.+||..+|.+|++++++++||||....+
T Consensus       220 ----~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~  265 (333)
T cd05600         220 ----PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW  265 (333)
T ss_pred             ----CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence                0000001346899999999999999999999999999999987544

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.4e-49  Score=372.03  Aligned_cols=253  Identities=26%  Similarity=0.383  Sum_probs=211.4

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      +.||+|+||+||+|++..+++.||||++.+... .......+.+|+.++..+ +||||++++++|.+.+.+|+||||+. 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999999999999999986532 222233456788999888 69999999999999999999999998 


Q ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      |+|...+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+|+
T Consensus        81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~  159 (318)
T cd05570          81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGT  159 (318)
T ss_pred             CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecC
Confidence            4677666654 459999999999999999999999999999999999999999999999999997643333344456789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      ..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+....                          
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~--------------------------  212 (318)
T cd05570         160 PDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE--------------------------  212 (318)
T ss_pred             ccccCHHHhcC-CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence            99999999976 568999999999999999999999998877666555543210                          


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLP  300 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~~  300 (397)
                        ..+...++.++.+||.+||..||.+||++     .++++||||....+.
T Consensus       213 --~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~  261 (318)
T cd05570         213 --VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD  261 (318)
T ss_pred             --CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence              01112458899999999999999999999     999999999886553

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=8.5e-50  Score=377.66  Aligned_cols=252  Identities=25%  Similarity=0.390  Sum_probs=211.3

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g-   95 (397)
                      +.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||||++| 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999999999999999999976432 222334567899999999999999999999999999999999985 


Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCc
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR  175 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~  175 (397)
                      +|...+.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus        81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  159 (328)
T cd05593          81 ELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTP  159 (328)
T ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCc
Confidence            67666654 44699999999999999999999999999999999999999999999999999986443333444567899


Q ss_pred             eeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCC
Q 015948          176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP  255 (397)
Q Consensus       176 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (397)
                      .|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+...-                           
T Consensus       160 ~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~---------------------------  211 (328)
T cd05593         160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED---------------------------  211 (328)
T ss_pred             CccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC---------------------------
Confidence            9999999976 568999999999999999999999998776655544432110                           


Q ss_pred             ccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       256 ~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                       ..+...++.++.+||.+||..||++|+     ++.|+++||||.+..+
T Consensus       212 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~  259 (328)
T cd05593         212 -IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNW  259 (328)
T ss_pred             -ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence             011234589999999999999999997     8999999999987654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.3e-48  Score=362.03  Aligned_cols=283  Identities=42%  Similarity=0.726  Sum_probs=229.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|+||+++++++.....+|+|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            57999999999999999999999999999999987654433344456789999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      |++++++..+......+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++.............
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY  160 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence            99988777776666669999999999999999999999999999999999999999999999999998875544344445


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC---CCCCCCcccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW---PDLAYLPDYVEY  248 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~  248 (397)
                      .++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++...+...   ............
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07847         161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIP  240 (286)
T ss_pred             ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCC
Confidence            67788999999877566889999999999999999999999998888877777666554332110   000000000000


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ......+.....+.++..+.+||.+||+.||++||++.|++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            0001112233456678999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=2.8e-49  Score=379.66  Aligned_cols=264  Identities=25%  Similarity=0.359  Sum_probs=217.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.+++.++||||++++++|.+++.+|+
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            35789999999999999999999999999999999975332 22223346689999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      |||||+ |+|..++...  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|........ 
T Consensus       121 v~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~  198 (370)
T cd05621         121 VMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV  198 (370)
T ss_pred             EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence            999998 5788877654  489999999999999999999999999999999999999999999999999987643322 


Q ss_pred             cccccccCceeeChhcccCcc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          167 RFTHQVFARWYRAPELLFGAK---QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .....+||+.|+|||++.+..   .++.++|||||||++|+|++|.+||.+.+....+..+.......   .++.     
T Consensus       199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~---~~p~-----  270 (370)
T cd05621         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL---NFPE-----  270 (370)
T ss_pred             ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc---CCCC-----
Confidence            234567899999999986532   37899999999999999999999999888777776665431110   1110     


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPL  299 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~  299 (397)
                                      ...++..+++||.+||..++.+  |++++|+++||||....+
T Consensus       271 ----------------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~  312 (370)
T cd05621         271 ----------------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW  312 (370)
T ss_pred             ----------------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCCc
Confidence                            1135889999999999865544  889999999999987543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=5.8e-49  Score=371.48  Aligned_cols=257  Identities=25%  Similarity=0.356  Sum_probs=216.0

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~   90 (397)
                      +|.+.+.||+|+||.||+|++..+++.||||++.+... .......+..|+.++..+.| ++|++++++|.+.+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            58999999999999999999999999999999976432 22233456789999999977 46888999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++ |+|...+... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++...........
T Consensus        81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~  159 (324)
T cd05587          81 EYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR  159 (324)
T ss_pred             cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence            9998 5777777654 4589999999999999999999999999999999999999999999999999876443344445


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.....                    
T Consensus       160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------------------  218 (324)
T cd05587         160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------------------  218 (324)
T ss_pred             eecCCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------------------
Confidence            5678999999999976 5689999999999999999999999998877766666543210                    


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPL  299 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~  299 (397)
                              .+...++.++++||.+||..||.+|++.     +++++||||....+
T Consensus       219 --------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~  265 (324)
T cd05587         219 --------SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW  265 (324)
T ss_pred             --------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence                    1122458899999999999999999976     89999999987654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=3.5e-49  Score=379.31  Aligned_cols=264  Identities=25%  Similarity=0.323  Sum_probs=219.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      -.++|++.+.||+|+||+||+|++..+++.||+|++.+.... ......+.+|+.+++.++||||++++++|.++..+|+
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            367899999999999999999999999999999999754322 2223346689999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      |||||+ |+|..++...  .+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++........ 
T Consensus       121 v~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~  198 (370)
T cd05596         121 VMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV  198 (370)
T ss_pred             EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence            999998 5777776543  489999999999999999999999999999999999999999999999999987643322 


Q ss_pred             cccccccCceeeChhcccCc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          167 RFTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .....+||+.|+|||++.+.   ..++.++|||||||++|||++|.+||.+.+....+..+......   ..++      
T Consensus       199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~---~~~~------  269 (370)
T cd05596         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS---LTFP------  269 (370)
T ss_pred             cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc---CCCC------
Confidence            23456789999999998653   24789999999999999999999999988877666666542110   0011      


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPL  299 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~  299 (397)
                                     ....+|.++++||.+||..+|.+  |++++++++||||.+..+
T Consensus       270 ---------------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~  312 (370)
T cd05596         270 ---------------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQW  312 (370)
T ss_pred             ---------------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence                           11235899999999999999988  999999999999987544

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.3e-49  Score=372.97  Aligned_cols=258  Identities=25%  Similarity=0.340  Sum_probs=216.9

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      +|.+.+.||+|+||.||+|++..+++.||+|++.+.... .........|..++..+ .|++|+++++++.+.+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            589999999999999999999999999999999865322 22223456788888877 5799999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++ |+|...+... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus        81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~  159 (323)
T cd05616          81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK  159 (323)
T ss_pred             cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence            9998 5787777654 4589999999999999999999999999999999999999999999999999986544344445


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..+.+..+.....                    
T Consensus       160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~--------------------  218 (323)
T cd05616         160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--------------------  218 (323)
T ss_pred             cCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------------
Confidence            5678999999999976 5689999999999999999999999998887776666554210                    


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP  300 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~  300 (397)
                              .+...++.++.+||.+||+.||.+|++     ..++++||||....+.
T Consensus       219 --------~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~  266 (323)
T cd05616         219 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE  266 (323)
T ss_pred             --------CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHH
Confidence                    111245899999999999999999997     4899999999876654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.1e-49  Score=376.23  Aligned_cols=252  Identities=26%  Similarity=0.393  Sum_probs=211.6

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g-   95 (397)
                      +.||+|+||.||+|++..+|..||+|++...... ......+.+|+.+++.++||||++++++|...+.+|+||||++| 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4799999999999999999999999999764321 22233456899999999999999999999999999999999985 


Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCc
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR  175 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~  175 (397)
                      +|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............|++
T Consensus        81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  159 (323)
T cd05595          81 ELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP  159 (323)
T ss_pred             cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCc
Confidence            66666654 44689999999999999999999999999999999999999999999999999886544334444567899


Q ss_pred             eeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCC
Q 015948          176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP  255 (397)
Q Consensus       176 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (397)
                      .|+|||++.+ ..++.++|||||||++|||++|..||.+.+.......+....                           
T Consensus       160 ~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~---------------------------  211 (323)
T cd05595         160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---------------------------  211 (323)
T ss_pred             CcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------------------------
Confidence            9999999976 568999999999999999999999998877666555543210                           


Q ss_pred             ccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       256 ~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                       ..+...+++++.+||.+||..||++|+     ++.++++|+||....+
T Consensus       212 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~  259 (323)
T cd05595         212 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  259 (323)
T ss_pred             -CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence             011234589999999999999999998     8999999999987554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.3e-49  Score=383.61  Aligned_cols=261  Identities=24%  Similarity=0.354  Sum_probs=213.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+|++.+.||+|+||+||+|++..+++.||||++.+... .......+.+|+.+|+.++|+||+++++.|.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            369999999999999999999999999999999865432 2223345678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----  165 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----  165 (397)
                      |||+ |+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..+....    
T Consensus        81 E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~  159 (376)
T cd05598          81 DYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY  159 (376)
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence            9998 5787777664 458999999999999999999999999999999999999999999999999985331000    


Q ss_pred             ---------------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH
Q 015948          166 ---------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL  206 (397)
Q Consensus       166 ---------------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell  206 (397)
                                                             ......+||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell  238 (376)
T cd05598         160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML  238 (376)
T ss_pred             cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehh
Confidence                                                   00123578999999999976 56899999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC---
Q 015948          207 NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI---  283 (397)
Q Consensus       207 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~---  283 (397)
                      +|++||.+.+..+....+.......   ..                     .....++.++.+||.+|+ .+|.+|+   
T Consensus       239 ~G~~Pf~~~~~~~~~~~i~~~~~~~---~~---------------------~~~~~~s~~~~~li~~l~-~~p~~R~~~~  293 (376)
T cd05598         239 VGQPPFLADTPAETQLKVINWETTL---HI---------------------PSQAKLSREASDLILRLC-CGAEDRLGKN  293 (376)
T ss_pred             hCCCCCCCCCHHHHHHHHhccCccc---cC---------------------CCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence            9999999887766555443210000   00                     011245899999999977 5999999   


Q ss_pred             CHHHHhcCCCCCCCCC
Q 015948          284 TAQQALEHRYFSSAPL  299 (397)
Q Consensus       284 t~~e~l~hp~~~~~~~  299 (397)
                      ++.++++||||....+
T Consensus       294 t~~ell~h~~~~~~~~  309 (376)
T cd05598         294 GADEIKAHPFFKGIDF  309 (376)
T ss_pred             CHHHHhCCCCcCCCCH
Confidence            9999999999987543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=7.9e-49  Score=372.29  Aligned_cols=295  Identities=44%  Similarity=0.814  Sum_probs=250.5

Q ss_pred             Chhhhcceee-eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------------ccchHHHHHHHHHhcCCCCe
Q 015948            7 SKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------------VNFTALREIKLLKELKSPHI   73 (397)
Q Consensus         7 ~~~~~~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------------~~~~~~~E~~~l~~l~hp~i   73 (397)
                      ...+.++|.. .+.||.|+||+||+|.+..+++.||||++........            ....+.+|+.+++.++|+||
T Consensus         3 ~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   82 (335)
T PTZ00024          3 SFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI   82 (335)
T ss_pred             ccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce
Confidence            3457889975 5779999999999999999999999999875432221            11246789999999999999


Q ss_pred             eEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEe
Q 015948           74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLA  153 (397)
Q Consensus        74 v~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~  153 (397)
                      ++++++|..++..|+||||+.|+|...+... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+
T Consensus        83 v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~  161 (335)
T PTZ00024         83 MGLVDVYVEGDFINLVMDIMASDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIA  161 (335)
T ss_pred             eeeeEEEecCCcEEEEEeccccCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEEC
Confidence            9999999999999999999999999888654 458999999999999999999999999999999999999999999999


Q ss_pred             eeccceeeCC--------------CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 015948          154 DFGLARIFGS--------------PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID  219 (397)
Q Consensus       154 DFG~a~~~~~--------------~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  219 (397)
                      |||++.....              .........++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.++.+
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~  241 (335)
T PTZ00024        162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID  241 (335)
T ss_pred             CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999987651              11222334567789999999776668999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      .+..++..++.+....|+.....+....+............+..+.++.+||.+||+.+|++||+++|++.||||.....
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence            99999999888888888877766666555555555566667778999999999999999999999999999999987665


Q ss_pred             CCC
Q 015948          300 PTE  302 (397)
Q Consensus       300 ~~~  302 (397)
                      +-.
T Consensus       322 ~~~  324 (335)
T PTZ00024        322 PCD  324 (335)
T ss_pred             CCC
Confidence            543

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=9.7e-49  Score=364.18  Aligned_cols=283  Identities=42%  Similarity=0.795  Sum_probs=234.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|++|+||+|.++.+++.||||.+...... .....+.+|+.+++.++|+||+++++++.++...|+||
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF   82 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence            47899999999999999999999999999999998764322 22334678999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||+.++|.+.+......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...........
T Consensus        83 e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  162 (291)
T cd07844          83 EYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSN  162 (291)
T ss_pred             ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccc
Confidence            99999999988876667899999999999999999999999999999999999999999999999998765433333334


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..++..|+|||++.+...++.++|||||||++|+|++|.+||.+.. ..+.+..+....+...+..|+............
T Consensus       163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS  242 (291)
T ss_pred             cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence            4567789999998765668899999999999999999999998766 456677777777777666666554443333222


Q ss_pred             c--ccCCCccccCCCCC--HHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          250 Y--VAAPPLRSLFPSAS--DDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       250 ~--~~~~~~~~~~~~~s--~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .  .....+....+.++  .++.++|.+||+.||++|||+.++++||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            2  11222333444555  899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-49  Score=374.22  Aligned_cols=249  Identities=28%  Similarity=0.413  Sum_probs=210.3

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL   97 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L   97 (397)
                      ||+|+||+||+|++..+++.||+|++..... .......+.+|+.+|+.++||||++++++|.+.+.+|+||||++ |+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            7999999999999999999999999875432 22233456789999999999999999999999999999999998 577


Q ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCcee
Q 015948           98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY  177 (397)
Q Consensus        98 ~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y  177 (397)
                      ...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||+.|
T Consensus        81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y  159 (312)
T cd05585          81 FHHLQRE-GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEY  159 (312)
T ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCccc
Confidence            7777654 458999999999999999999999999999999999999999999999999998654433444556789999


Q ss_pred             eChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcc
Q 015948          178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR  257 (397)
Q Consensus       178 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (397)
                      +|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+....                            .
T Consensus       160 ~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~----------------------------~  210 (312)
T cd05585         160 LAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP----------------------------L  210 (312)
T ss_pred             CCHHHHcC-CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC----------------------------C
Confidence            99999976 568999999999999999999999998877666555543210                            0


Q ss_pred             ccCCCCCHHHHHHHHHhcCcCCCCCC---CHHHHhcCCCCCCCC
Q 015948          258 SLFPSASDDALDLLSKMFTYDPKARI---TAQQALEHRYFSSAP  298 (397)
Q Consensus       258 ~~~~~~s~~~~~li~~~L~~dP~~R~---t~~e~l~hp~~~~~~  298 (397)
                      .+...+++++++||.+||..||.+|+   ++.|++.||||....
T Consensus       211 ~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~  254 (312)
T cd05585         211 RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS  254 (312)
T ss_pred             CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence            11234589999999999999999997   589999999998753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=5.1e-49  Score=371.38  Aligned_cols=252  Identities=26%  Similarity=0.369  Sum_probs=212.8

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||.||+|++..+++.||||++.+... .......+..|..++..+ +||||++++++|.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            469999999999999999999999999976432 222334466788888866 799999999999999999999999984


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..............|+
T Consensus        81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  159 (321)
T cd05591          81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGT  159 (321)
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccC
Confidence             777776654 458999999999999999999999999999999999999999999999999998754444445556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.....                         
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~-------------------------  213 (321)
T cd05591         160 PDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV-------------------------  213 (321)
T ss_pred             ccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------------
Confidence            99999999876 5689999999999999999999999998887777766654210                         


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCC-------CHHHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARI-------TAQQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~-------t~~e~l~hp~~~~~~~  299 (397)
                         .....++.++.+||.+||+.||++|+       +++++++||||....+
T Consensus       214 ---~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~  262 (321)
T cd05591         214 ---LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW  262 (321)
T ss_pred             ---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence               01123478999999999999999999       8999999999987544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=3.9e-49  Score=365.47  Aligned_cols=282  Identities=50%  Similarity=0.879  Sum_probs=236.6

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|++.+.||.|+||.||+|++..+|..||||.+............+.+|++++++++||||+++++++.+++..|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            48999999999999999999999999999999876554444455678899999999999999999999999999999999


Q ss_pred             cccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           93 METDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        93 ~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      +.++|...+... +..+++..++.++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++.............
T Consensus        81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (284)
T cd07860          81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE  160 (284)
T ss_pred             cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence            998988887654 3458999999999999999999999999999999999999999999999999998765544445556


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-ccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQY  250 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~  250 (397)
                      .++..|+|||++.+...++.++|||||||++|+|++|+.||.+.++.+.+.++...++......|+.....+.... +..
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd07860         161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPK  240 (284)
T ss_pred             cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccc
Confidence            6788899999987766678899999999999999999999999988888888888877766555554333222111 111


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .....+....+.++.+++++|.+||+.||++|||++++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         241 WARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             ccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            11222334455678999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.4e-49  Score=379.54  Aligned_cols=263  Identities=27%  Similarity=0.408  Sum_probs=216.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|++.+.||+|+||+||+|++..+++.||+|++..... .......+.+|+.++..++|+||+++++.|.+++++|+||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            479999999999999999999999999999999975432 2233445678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----  165 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----  165 (397)
                      |||+ |+|..++.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||++..+....    
T Consensus        81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~  159 (360)
T cd05627          81 EFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF  159 (360)
T ss_pred             eCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence            9998 4777777654 458999999999999999999999999999999999999999999999999987542211    


Q ss_pred             -------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 015948          166 -------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG  214 (397)
Q Consensus       166 -------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  214 (397)
                                                     ......+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCC
Confidence                                           01124578999999999976 6689999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC---CHHHHhcC
Q 015948          215 SSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI---TAQQALEH  291 (397)
Q Consensus       215 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~---t~~e~l~h  291 (397)
                      .+.......+.......   .++                 +    ...++.++++||.+|+. ||.+|+   +++++++|
T Consensus       239 ~~~~~~~~~i~~~~~~~---~~p-----------------~----~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         239 ETPQETYRKVMNWKETL---VFP-----------------P----EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             CCHHHHHHHHHcCCCce---ecC-----------------C----CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            87776666654311000   000                 0    01258999999999875 999998   58999999


Q ss_pred             CCCCCCCCCC
Q 015948          292 RYFSSAPLPT  301 (397)
Q Consensus       292 p~~~~~~~~~  301 (397)
                      |||.+..+..
T Consensus       294 p~f~~~~~~~  303 (360)
T cd05627         294 PFFEGVDWGH  303 (360)
T ss_pred             CCCCCCCHHH
Confidence            9999876643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1e-48  Score=368.43  Aligned_cols=252  Identities=27%  Similarity=0.418  Sum_probs=208.7

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHh-cCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      +.||+|+||+||+|++..+++.||||+++..... .........|..++.. ++||||+++++++..++.+|+||||++ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999999999999999999864322 2223344567777765 489999999999999999999999998 


Q ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      |+|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus        81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt  159 (316)
T cd05592          81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGT  159 (316)
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCC
Confidence            5676666654 459999999999999999999999999999999999999999999999999998754444445566789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+.+..+....                          
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--------------------------  212 (316)
T cd05592         160 PDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR--------------------------  212 (316)
T ss_pred             ccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence            99999999976 568999999999999999999999999887766665543210                          


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCH-HHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-QQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-~e~l~hp~~~~~~~  299 (397)
                        ..+...++.++.+||.+||..||.+|+++ .++++||||....+
T Consensus       213 --~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05592         213 --PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDW  256 (316)
T ss_pred             --CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCH
Confidence              01112358899999999999999999986 58889999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-51  Score=359.95  Aligned_cols=264  Identities=25%  Similarity=0.367  Sum_probs=229.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ...++|..+++||+|.||+|-+|+.+.+++.||||++++...-. .....-+.|-.+|+..+||++..|-..|+..+++|
T Consensus       165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC  244 (516)
T KOG0690|consen  165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC  244 (516)
T ss_pred             eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence            35788999999999999999999999999999999998765321 12223456889999999999999999999999999


Q ss_pred             EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||+.| .|...+.. ...+++..++.|...|+.||.|||+++||+||||.+|+|++.+|++||+|||+++.--....
T Consensus       245 FVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~  323 (516)
T KOG0690|consen  245 FVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD  323 (516)
T ss_pred             EEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccc
Confidence            99999995 56555544 34499999999999999999999999999999999999999999999999999997666667


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ...+.||||.|+|||++.. ..|+.++|+|.+||++|||++|+.||...+.....+.|+..-.                 
T Consensus       324 t~kTFCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~-----------------  385 (516)
T KOG0690|consen  324 TTKTFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL-----------------  385 (516)
T ss_pred             eeccccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc-----------------
Confidence            7888999999999999976 6799999999999999999999999998888777777655311                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~  302 (397)
                                 .++..+|++++.|+..+|.+||.+|..     +.|+.+|+||.+..|...
T Consensus       386 -----------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~  435 (516)
T KOG0690|consen  386 -----------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEAT  435 (516)
T ss_pred             -----------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHH
Confidence                       233467999999999999999999984     789999999999988654

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.7e-48  Score=363.22  Aligned_cols=286  Identities=49%  Similarity=0.850  Sum_probs=240.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|.+.+.||+|++|+||+|.+..+|+.||+|.+............+.+|+++++.++|+||+++++++..+.+.|+|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            67999999999999999999999999999999987654444444567789999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCCCCCccc
Q 015948           92 FMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |++++|...+..... .+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.+||+|||++...........
T Consensus        82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~  161 (294)
T PLN00009         82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT  161 (294)
T ss_pred             cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccc
Confidence            999999888865433 3688999999999999999999999999999999999985 56799999999987654444445


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||++.+...++.++|||||||++|+|++|.+||...+..+.+.+++..++.+....|.+...++++....
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (294)
T PLN00009        162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF  241 (294)
T ss_pred             cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence            56678889999998775678899999999999999999999999988888888888888877777776655555542111


Q ss_pred             c-ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          250 Y-VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       250 ~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      . ..........+.+++++.++|.+||+.||++||++.++++||||.+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence            1 11122233456779999999999999999999999999999999864

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=7.3e-49  Score=365.45  Aligned_cols=284  Identities=45%  Similarity=0.841  Sum_probs=239.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~l   88 (397)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|.++...........+.+|+.++++++||||+++++++...  ..+|+
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l   83 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM   83 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence            4679999999999999999999999999999999986654444444567899999999999999999998777  89999


Q ss_pred             EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||||++++|...+......+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++..........
T Consensus        84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  163 (293)
T cd07843          84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY  163 (293)
T ss_pred             EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc
Confidence            99999999998887766679999999999999999999999999999999999999999999999999998876654444


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ....++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+.+++..++.+....|+....++.....
T Consensus       164 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (293)
T cd07843         164 TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKK  243 (293)
T ss_pred             ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccc
Confidence            55667888999999877566789999999999999999999999999999999999888887777666654443332211


Q ss_pred             cc--ccCCCccccCCC--CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          249 QY--VAAPPLRSLFPS--ASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       249 ~~--~~~~~~~~~~~~--~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ..  .....+...++.  +++.+.+||.+||+.||++|||+.|++.|+||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         244 TFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             ccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            11  111122333444  48999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.3e-48  Score=369.89  Aligned_cols=253  Identities=25%  Similarity=0.352  Sum_probs=206.1

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||.||+|++..+++.||+|++.+..... .....+.+|+.+++.+ +||||++++++|.+.+.+|+|||||+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            47999999999999999999999999998654322 2233466899999998 699999999999999999999999984


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus        81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  159 (329)
T cd05588          81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGT  159 (329)
T ss_pred             CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCC
Confidence             777666544 469999999999999999999999999999999999999999999999999997543333344556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--------HHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--------IDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      +.|+|||++.+ ..++.++|+|||||++|+|++|+.||.....        .+.+.+....   .               
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---~---------------  220 (329)
T cd05588         160 PNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE---K---------------  220 (329)
T ss_pred             ccccCHHHHcC-CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---C---------------
Confidence            99999999976 5689999999999999999999999963211        1111111110   0               


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC------HHHHhcCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRYFSSAPL  299 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t------~~e~l~hp~~~~~~~  299 (397)
                               ...+...++.++.+||.+||..||.+|++      ++++++||||....+
T Consensus       221 ---------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~  270 (329)
T cd05588         221 ---------QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW  270 (329)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence                     00122346899999999999999999987      789999999987654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.3e-48  Score=367.72  Aligned_cols=252  Identities=26%  Similarity=0.399  Sum_probs=208.8

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHh-cCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      +.||+|+||.||+|+++.+|+.||+|++...... .........|..++.. ++||||++++++|.+++++|+||||+. 
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4799999999999999999999999999764321 2223345678888875 489999999999999999999999998 


Q ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      |+|...+... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+|+
T Consensus        81 g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (316)
T cd05620          81 GDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGT  159 (316)
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCC
Confidence            5777777654 458999999999999999999999999999999999999999999999999987543333344556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+....+....    +                     
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~----~---------------------  213 (316)
T cd05620         160 PDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT----P---------------------  213 (316)
T ss_pred             cCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----C---------------------
Confidence            99999999976 568999999999999999999999998877665555443210    0                     


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCH-HHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-QQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-~e~l~hp~~~~~~~  299 (397)
                         .+...++.++++||.+||..||++|+++ +++++||||....+
T Consensus       214 ---~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~  256 (316)
T cd05620         214 ---HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINW  256 (316)
T ss_pred             ---CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCH
Confidence               1112358899999999999999999997 58889999987543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=3e-49  Score=373.59  Aligned_cols=252  Identities=25%  Similarity=0.387  Sum_probs=210.3

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g-   95 (397)
                      +.||+|+||+||+|++..+|+.||+|++...... ......+.+|+.+++.++||||++++++|...+.+|+||||++| 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999999999999999764322 22234566899999999999999999999999999999999985 


Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      +|...+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||+++............+|+
T Consensus        81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  159 (325)
T cd05594          81 ELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT  159 (325)
T ss_pred             cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCC
Confidence            66655554 4468999999999999999999997 799999999999999999999999999998654333344456789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+...-                          
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~--------------------------  212 (325)
T cd05594         160 PEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--------------------------  212 (325)
T ss_pred             cccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC--------------------------
Confidence            99999999976 568999999999999999999999998877655554443210                          


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                        ..+...+++++.+||.+||+.||++|+     ++.++++||||.+..+
T Consensus       213 --~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~  260 (325)
T cd05594         213 --IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVW  260 (325)
T ss_pred             --CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence              011234589999999999999999997     8999999999987544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-51  Score=374.77  Aligned_cols=258  Identities=29%  Similarity=0.457  Sum_probs=219.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ...|..++.||+|+||.||+|.+..+++.||+|++....... ....+.+|+.+|.+++++||.++|+.|-.+..++++|
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d-eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM   90 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED-EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM   90 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcch-hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence            456888899999999999999999999999999998765443 3446778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |||.| ++++++.. +..+.+..+..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||.+..+........
T Consensus        91 ey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen   91 EYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             HHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence            99995 55555554 44469999999999999999999999999999999999999999999999999998877777778


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      +.+||++|||||++.+ ..|+.++||||||++.|||++|.||+........+..|    ..                   
T Consensus       170 tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI----pk-------------------  225 (467)
T KOG0201|consen  170 TFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI----PK-------------------  225 (467)
T ss_pred             cccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec----cC-------------------
Confidence            8999999999999985 78999999999999999999999998765542111111    00                   


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                        ..||  .+-...|+.+++||..||.+||+.||+|.++|+|+|++...
T Consensus       226 --~~PP--~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~  270 (467)
T KOG0201|consen  226 --SAPP--RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK  270 (467)
T ss_pred             --CCCC--ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence              0111  11125589999999999999999999999999999997643

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-50  Score=368.74  Aligned_cols=269  Identities=26%  Similarity=0.378  Sum_probs=225.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..+.|..-++||+|+||.||-++.+.||+.||+|++.+...+ ..-...+++|..||.+++.++||.+-.+|++.+.+|+
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl  262 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL  262 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence            356788999999999999999999999999999998765432 3334467899999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           89 VFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      |+..|+ |||...|.+.+ ..|++..++.|+.+|+.||++||+.+||+|||||+|||+|+.|+++|+|+|+|..+.... 
T Consensus       263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~-  341 (591)
T KOG0986|consen  263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK-  341 (591)
T ss_pred             EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCC-
Confidence            999998 57877776654 459999999999999999999999999999999999999999999999999999885543 


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+||..|||||++.+.. |+.+.|+|||||++|||+.|+.||........-+.+-....+..              
T Consensus       342 ~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~--------------  406 (591)
T KOG0986|consen  342 PIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP--------------  406 (591)
T ss_pred             ccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch--------------
Confidence            344459999999999998754 99999999999999999999999988765544433322211111              


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPTEPN  304 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~~~  304 (397)
                                ..+....|+++++|...+|++||.+|..     ++++.+||||++.+|.....
T Consensus       407 ----------~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rlea  459 (591)
T KOG0986|consen  407 ----------EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEA  459 (591)
T ss_pred             ----------hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhc
Confidence                      1222355999999999999999999984     67999999999998876433

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=6.3e-49  Score=372.53  Aligned_cols=262  Identities=26%  Similarity=0.405  Sum_probs=211.0

Q ss_pred             ceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCc--cCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNL   86 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~   86 (397)
                      +|++.+.||+|+||+||+|++.   .+++.||+|++.+...  .......+.+|+.+++.++ |+||++++++|..++.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5899999999999999999864   4789999999975432  1222345668999999994 89999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||+. |+|...+.... .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.+....
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~  159 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE  159 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence            99999998 57877776543 58999999999999999999999999999999999999999999999999998654332


Q ss_pred             -CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       166 -~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                       ......+||+.|+|||++.+...++.++|||||||++|||++|..||...........+........            
T Consensus       160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~------------  227 (332)
T cd05614         160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD------------  227 (332)
T ss_pred             CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC------------
Confidence             2233467899999999998755688999999999999999999999975432221122211111000            


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                                  ..+...+++.+.+||.+||..||++|+     +++++++||||....+
T Consensus       228 ------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  275 (332)
T cd05614         228 ------------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW  275 (332)
T ss_pred             ------------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence                        012234589999999999999999999     8899999999987544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-48  Score=368.86  Aligned_cols=265  Identities=25%  Similarity=0.333  Sum_probs=217.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|++.+.||+|+||+||++++..+++.||+|++.+... .......+.+|+.+++.++|+||++++++|.+++++|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            579999999999999999999999999999999975322 2223344678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~  168 (397)
                      ||+. |+|..++.+....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+..... ..
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS  160 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence            9997 588888876666799999999999999999999999999999999999999999999999999977644332 22


Q ss_pred             cccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ...+||+.|+|||++.+    ...++.++|||||||++|+|++|+.||.+.+..+....+.......             
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~-------------  227 (331)
T cd05597         161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHF-------------  227 (331)
T ss_pred             cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcc-------------
Confidence            33568999999999863    2457889999999999999999999998877766666654321100             


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPL  299 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~  299 (397)
                                .+....+.+++++++||.+||..++.+  |++++++++||||.+..+
T Consensus       228 ----------~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~  274 (331)
T cd05597         228 ----------QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDW  274 (331)
T ss_pred             ----------cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCH
Confidence                      011112346899999999998764443  789999999999987654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.4e-48  Score=361.29  Aligned_cols=256  Identities=25%  Similarity=0.345  Sum_probs=209.3

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL   97 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L   97 (397)
                      ||+|+||+||+|.+..+++.||+|++....... .....+..|+.+++.++|+||++++++|..+..+|+||||++ |+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999999999999999987643322 122356689999999999999999999999999999999998 567


Q ss_pred             HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           98 ETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        98 ~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      ...+..   .+..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++..............|+
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence            666543   34468999999999999999999999999999999999999999999999999998765544444456788


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|+|||||++|+|++|+.||...........+........                      
T Consensus       161 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------  217 (280)
T cd05608         161 PGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS----------------------  217 (280)
T ss_pred             cCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC----------------------
Confidence            89999999976 5688999999999999999999999987654322222222111000                      


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP  300 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~  300 (397)
                        ..+.+.++.++.+|+.+||+.||++|+     +++++++||||++..+.
T Consensus       218 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~  266 (280)
T cd05608         218 --VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR  266 (280)
T ss_pred             --CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence              012234689999999999999999999     88999999999886554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=8.2e-49  Score=388.10  Aligned_cols=276  Identities=24%  Similarity=0.386  Sum_probs=215.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC------CCeeEEEeeeecC-
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS------PHIIELIDAFPHK-   83 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~l~~~~~~~-   83 (397)
                      .++|.+.+.||+|+||+||+|++..+++.||||+++...   ........|+.+++.+.|      .++++++++|... 
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~  204 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET  204 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence            578999999999999999999999999999999986432   122234568888887755      4589999988764 


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCC--------------
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHG--------------  148 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~--------------  148 (397)
                      +++|+|||+++++|++++.+. ..+++..++.++.||+.||+|||+ .||+||||||+|||++.++              
T Consensus       205 ~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~  283 (467)
T PTZ00284        205 GHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD  283 (467)
T ss_pred             ceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence            589999999999999988765 359999999999999999999998 5999999999999998765              


Q ss_pred             --cEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 015948          149 --QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA  226 (397)
Q Consensus       149 --~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~  226 (397)
                        .+||+|||.+....   ......+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.++.+.+..+..
T Consensus       284 ~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~  359 (467)
T PTZ00284        284 PCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK  359 (467)
T ss_pred             CceEEECCCCccccCc---cccccccCCccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence              49999999886432   23345678999999999987 5699999999999999999999999999998888888887


Q ss_pred             HhCCCCCCCCCCCCCCcc---cccc--------------ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948          227 AFGTATPSQWPDLAYLPD---YVEY--------------QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL  289 (397)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~---~~~~--------------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l  289 (397)
                      .++..+. .|........   ....              .......+...  ..++.+.|||.+||.+||.+|||++|+|
T Consensus       360 ~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dli~~mL~~dP~~R~ta~e~L  436 (467)
T PTZ00284        360 TLGRLPS-EWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV--IRDDLLCDLIYGLLHYDRQKRLNARQMT  436 (467)
T ss_pred             HcCCCCH-HHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh--hchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence            7765432 2211100000   0000              00000000000  1256788999999999999999999999


Q ss_pred             cCCCCCCC
Q 015948          290 EHRYFSSA  297 (397)
Q Consensus       290 ~hp~~~~~  297 (397)
                      +||||...
T Consensus       437 ~Hp~~~~~  444 (467)
T PTZ00284        437 THPYVLKY  444 (467)
T ss_pred             cCcccccc
Confidence            99999763

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-50  Score=400.17  Aligned_cols=266  Identities=25%  Similarity=0.360  Sum_probs=231.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|.|+++||+|+||.|.+++++.+++.||+|++.+-... .....-|..|-++|..-+.+=|++++.+|+++.++|+|
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence            68899999999999999999999999999999999873322 22233466789999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC-CCCCc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG-SPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~-~~~~~  167 (397)
                      |||++ |||+.++-+.. .+++..+++|+..|+.||+-||+.|+|||||||+||||+..|++||+|||.+-.+. ++...
T Consensus       154 MdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~  232 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR  232 (1317)
T ss_pred             EecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE
Confidence            99998 68999998877 79999999999999999999999999999999999999999999999999998876 44556


Q ss_pred             ccccccCceeeChhcccC---c-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          168 FTHQVFARWYRAPELLFG---A-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~---~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      ....+|||.|.|||+|..   . ..|+..+|||||||++|||+.|..||...+-.+.+.+|+..-....   +|      
T Consensus       233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~---FP------  303 (1317)
T KOG0612|consen  233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS---FP------  303 (1317)
T ss_pred             eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC---CC------
Confidence            678899999999999842   2 4699999999999999999999999999999999999987511100   01      


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHHhcCCCCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~l~hp~~~~~~~~~~  302 (397)
                      +               -..+|.++++||++++. +|+.|.+   ++++..||||.+..|...
T Consensus       304 ~---------------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~i  349 (1317)
T KOG0612|consen  304 D---------------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNI  349 (1317)
T ss_pred             c---------------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhh
Confidence            0               01369999999999886 8999998   999999999999999543

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=3.5e-48  Score=363.54  Aligned_cols=285  Identities=45%  Similarity=0.788  Sum_probs=239.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-------   82 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-------   82 (397)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++............+.+|+++++.++|+||+++++.+..       
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   85 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR   85 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence            3689999999999999999999999999999999997665444444567789999999999999999988743       


Q ss_pred             -CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           83 -KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        83 -~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                       ...+|+|+||+.+++...+......+++..++.++.||++||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus        86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence             3457999999999999888876667999999999999999999999999999999999999999999999999999865


Q ss_pred             CCCCC-----------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 015948          162 GSPDR-----------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT  230 (397)
Q Consensus       162 ~~~~~-----------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  230 (397)
                      .....           ..+...+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+.......+....+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT  245 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            43221           1233456788999999877666899999999999999999999999999999999999988888


Q ss_pred             CCCCCCCCCCCCcccccc--ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          231 ATPSQWPDLAYLPDYVEY--QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ..+..|++...++.....  .....+.+...+..++.++.+||.+||..||++|||+.|++.||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            877777776655543321  1112222334455677899999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.4e-48  Score=368.70  Aligned_cols=253  Identities=26%  Similarity=0.441  Sum_probs=211.3

Q ss_pred             eeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCcc--CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           17 REVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++.||+|+||.||+|++.   .+++.||+|++......  ......+.+|+.+|+.++||||++++++|..++.+|+|||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            368999999999999864   47889999999764321  1223345689999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |+.| +|...+.. ...+.+..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...........
T Consensus        81 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  159 (323)
T cd05584          81 YLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT  159 (323)
T ss_pred             CCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccc
Confidence            9985 67666655 445889999999999999999999999999999999999999999999999999865444444445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..|++.|+|||++.+ ..++.++|||||||++|||++|++||.+.+....+..+....                      
T Consensus       160 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~----------------------  216 (323)
T cd05584         160 FCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK----------------------  216 (323)
T ss_pred             cCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC----------------------
Confidence            678999999999976 568899999999999999999999999887766666554321                      


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                            ..+.+.+++++.+||.+||..||++|+     +++++++||||....+
T Consensus       217 ------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~  264 (323)
T cd05584         217 ------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW  264 (323)
T ss_pred             ------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence                  012234588999999999999999999     8999999999987543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1.1e-47  Score=357.18  Aligned_cols=283  Identities=44%  Similarity=0.763  Sum_probs=228.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||.||+|.+..+|..||+|.+..... ......+.+|+.+++.++|+||+++++++..++..|+||
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            4689999999999999999999999999999999865432 233345678999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||+.++++..+......+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++...........
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  162 (291)
T cd07870          83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS  162 (291)
T ss_pred             ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence            99999999888776666889999999999999999999999999999999999999999999999999865444433445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..++..|+|||++.+...++.++|||||||++|+|++|.+||.+.++ .+.+..+...++.+....++.....+.+....
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07870         163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW  242 (291)
T ss_pred             ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence            56788899999987655688899999999999999999999987654 46666666666665555554443333322211


Q ss_pred             cc--cCCCccccCCC--CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          250 YV--AAPPLRSLFPS--ASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       250 ~~--~~~~~~~~~~~--~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ..  ........+..  .+.++.+++.+||..||++|||+.|++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            11  11111121211  26789999999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=6.7e-49  Score=370.11  Aligned_cols=253  Identities=26%  Similarity=0.428  Sum_probs=213.6

Q ss_pred             eeeeeecCcEEEEEEEE---CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           17 REVLGEGTYGVVYKAID---TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      ++.||+|+||.||++++   ..+|+.||+|++............+.+|+.+|++++||||++++++|.+++.+|+||||+
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence            36799999999999986   357899999999865443333445678999999999999999999999999999999999


Q ss_pred             c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948           94 E-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV  172 (397)
Q Consensus        94 ~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~  172 (397)
                      + |+|...+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............
T Consensus        81 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  159 (318)
T cd05582          81 RGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC  159 (318)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceeccc
Confidence            8 5777777553 4589999999999999999999999999999999999999999999999999987655444445567


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA  252 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (397)
                      |++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....                       
T Consensus       160 g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~-----------------------  215 (318)
T cd05582         160 GTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL-----------------------  215 (318)
T ss_pred             CChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence            8999999999976 5688999999999999999999999998877666665543210                       


Q ss_pred             CCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948          253 APPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL  299 (397)
Q Consensus       253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~  299 (397)
                           .+...+++++.+||.+||+.||++||+     .++++.||||....+
T Consensus       216 -----~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~  262 (318)
T cd05582         216 -----GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW  262 (318)
T ss_pred             -----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence                 112345899999999999999999999     778999999987644

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=2.5e-48  Score=373.38  Aligned_cols=264  Identities=25%  Similarity=0.343  Sum_probs=216.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      -.++|++.+.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+++++|+
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            35899999999999999999999999999999999875332 22223346689999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      |||||+ |+|..++...  .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........ 
T Consensus       121 v~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~  198 (371)
T cd05622         121 VMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV  198 (371)
T ss_pred             EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc
Confidence            999998 5777777654  389999999999999999999999999999999999999999999999999987643322 


Q ss_pred             cccccccCceeeChhcccCcc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          167 RFTHQVFARWYRAPELLFGAK---QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .....+||+.|+|||++.+..   .++.++|||||||++|||++|.+||.+.+.......+.......   .++      
T Consensus       199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~---~~~------  269 (371)
T cd05622         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL---TFP------  269 (371)
T ss_pred             cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc---cCC------
Confidence            234567899999999986532   37899999999999999999999999887776666665421110   011      


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPL  299 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~  299 (397)
                                     ....++..+++||.+||..++.+  |++++++++|+||.+..+
T Consensus       270 ---------------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~  312 (371)
T cd05622         270 ---------------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  312 (371)
T ss_pred             ---------------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence                           11346899999999999844433  789999999999987544

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.1e-48  Score=369.56  Aligned_cols=252  Identities=25%  Similarity=0.377  Sum_probs=209.2

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHH-HHHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIK-LLKELKSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~-~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||+||+|++..+|+.||||++.+.... ......+..|.. +++.++||||+++++.|...+.+|+||||+.|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4799999999999999999999999999764322 122233445554 56789999999999999999999999999985


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+.. +..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.............+|+
T Consensus        81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (323)
T cd05575          81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGT  159 (323)
T ss_pred             CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCC
Confidence             67666655 4468999999999999999999999999999999999999999999999999997654444444556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+....                          
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--------------------------  212 (323)
T cd05575         160 PEYLAPEVLRK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP--------------------------  212 (323)
T ss_pred             hhhcChhhhcC-CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence            99999999976 568999999999999999999999999877666655554320                          


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~  299 (397)
                        ..+.+.++..+.+||.+||+.||.+|+++    .++++||||....+
T Consensus       213 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~  259 (323)
T cd05575         213 --LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW  259 (323)
T ss_pred             --CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence              01223458999999999999999999987    69999999987654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-48  Score=359.67  Aligned_cols=263  Identities=25%  Similarity=0.380  Sum_probs=217.0

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .|++.+.||+|+||+||++.+..+++.||+|++....... .....+.+|+.+++.++|+||+++++.+..+.++|+|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4899999999999999999999999999999987643322 223346789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |+. |+|...+... ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....... ...
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~  159 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-TIR  159 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-ccc
Confidence            998 5777776553 3458999999999999999999999999999999999999999999999999998754322 223


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+|+..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+...+....                 
T Consensus       160 ~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------------  221 (285)
T cd05605         160 GRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ-----------------  221 (285)
T ss_pred             cccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc-----------------
Confidence            4578889999999976 5688999999999999999999999988765544444433221111                 


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~~  301 (397)
                             ......++..+.+||.+||..||++||     +++++++||||....+..
T Consensus       222 -------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~  271 (285)
T cd05605         222 -------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKR  271 (285)
T ss_pred             -------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHH
Confidence                   011234588999999999999999999     899999999998765543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=2.2e-48  Score=371.85  Aligned_cols=257  Identities=27%  Similarity=0.419  Sum_probs=207.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||+||+|++..+++.||||++..... ......+.+|+.+++.++|+||++++++|..++.+|+||
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  151 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL  151 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence            5779999999999999999999999999999999865432 223346778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||+.| +|..     .....+..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+........
T Consensus       152 e~~~~~~L~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~  226 (353)
T PLN00034        152 EFMDGGSLEG-----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN  226 (353)
T ss_pred             ecCCCCcccc-----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccc
Confidence            99996 4432     22367888899999999999999999999999999999999999999999999987654443445


Q ss_pred             ccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          170 HQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ..+|+..|+|||++..    ...++.++|||||||++|||++|+.||......+....+........             
T Consensus       227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------  293 (353)
T PLN00034        227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP-------------  293 (353)
T ss_pred             ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-------------
Confidence            5678999999999743    23356789999999999999999999975433222221111100000             


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 ......++.++++||.+||..||++|||+.|+++||||...
T Consensus       294 -----------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        294 -----------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             -----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence                       11123458899999999999999999999999999999864

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=5.3e-48  Score=357.75  Aligned_cols=281  Identities=45%  Similarity=0.842  Sum_probs=234.6

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|++.+.||.|++|+||+|++..+|..||||++...... .....+.+|+.+++.++|+||+++++++.+.+..|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY   79 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence            589999999999999999999999999999999765432 2334567899999999999999999999999999999999


Q ss_pred             cccCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           93 METDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        93 ~~g~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ++|+|..++....  ..+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++............
T Consensus        80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (284)
T cd07836          80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN  159 (284)
T ss_pred             CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence            9999998887644  45899999999999999999999999999999999999999999999999999876544444445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-cc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQ  249 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~  249 (397)
                      ..++..|++||++.+...++.++|+|||||++|+|++|.+||.+.+..+....++.....+....|......+.... +.
T Consensus       160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07836         160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP  239 (284)
T ss_pred             ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence            66788899999987766688999999999999999999999999988888888888777666655554443322211 01


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .........+.+.++..++++|.+||+.||.+||++.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            111112233445678999999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=4.4e-48  Score=366.08  Aligned_cols=253  Identities=24%  Similarity=0.357  Sum_probs=205.2

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||+||+|++..+++.||+|++.+..... .....+.+|+.++.++ +||||++++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            47999999999999999999999999998654322 2233466788888876 799999999999999999999999994


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus        81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  159 (329)
T cd05618          81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGT  159 (329)
T ss_pred             CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCC
Confidence             67666654 3459999999999999999999999999999999999999999999999999997644334344556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--------cHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--------DIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ..|+|||++.+ ..++.++|||||||++|+|++|..||....        ....+.+....   .               
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~---~---------------  220 (329)
T cd05618         160 PNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---K---------------  220 (329)
T ss_pred             ccccCHHHHcC-CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc---C---------------
Confidence            99999999976 568999999999999999999999995311        11111111110   0               


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC------HHHHhcCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRYFSSAPL  299 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t------~~e~l~hp~~~~~~~  299 (397)
                               ...++..++..+.+||.+||+.||++|++      ++++++||||.+..+
T Consensus       221 ---------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         221 ---------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence                     01122356899999999999999999998      589999999987655

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=6.2e-48  Score=364.24  Aligned_cols=257  Identities=25%  Similarity=0.365  Sum_probs=214.6

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~   90 (397)
                      +|.+.+.||+|+||+||+|+++.+|+.||+|++.+... .......+..|+.++..+.| ++|++++++|.+.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            47889999999999999999999999999999976432 22223346678899988865 77888999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++ |+|...+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus        81 Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~  159 (323)
T cd05615          81 EYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR  159 (323)
T ss_pred             cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence            9998 5777776554 4599999999999999999999999999999999999999999999999999986543333344


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+.....                    
T Consensus       160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------------------  218 (323)
T cd05615         160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------------------  218 (323)
T ss_pred             CccCCccccCHHHHcC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------------
Confidence            5668999999999976 5689999999999999999999999998877666666554210                    


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL  299 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~  299 (397)
                              .+...++.++.+|+.+||+.||.+|++     .+++++||||....+
T Consensus       219 --------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~  265 (323)
T cd05615         219 --------SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW  265 (323)
T ss_pred             --------CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence                    111245889999999999999999997     578999999997654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-48  Score=357.51  Aligned_cols=281  Identities=53%  Similarity=0.934  Sum_probs=236.6

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      |++.+.||.|++|.||+|.+..+|..||+|++............+.+|+.+++.++|+||+++++++.+++..|++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            67899999999999999999999999999999866544444456778999999999999999999999999999999999


Q ss_pred             ccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948           94 ETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV  172 (397)
Q Consensus        94 ~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~  172 (397)
                      +++|..++.... ..+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++..............
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~  160 (283)
T cd07835          81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEV  160 (283)
T ss_pred             CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccc
Confidence            989988887654 3589999999999999999999999999999999999999999999999999987654444444556


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-cccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYV  251 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~  251 (397)
                      ++..|+|||++.+...++.++|+|||||++|+|++|.+||.+.++...+..++..++.+....|+.....++... +...
T Consensus       161 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd07835         161 VTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKW  240 (283)
T ss_pred             cccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccc
Confidence            678899999987755678999999999999999999999999988888888888877766665554444333221 1111


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .........+.++..+.++|.+||+.||++|||++|+++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         241 ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            2223344566788999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1e-47  Score=361.51  Aligned_cols=253  Identities=26%  Similarity=0.421  Sum_probs=209.7

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHh-cCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      +.||+|+||+||+|++..+++.||||++..... ..........|..+++. ++||||+++++++.+.+.+|+||||++ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            479999999999999999999999999976532 12223345668888876 489999999999999999999999998 


Q ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      |+|...+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............||
T Consensus        81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (316)
T cd05619          81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGT  159 (316)
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCC
Confidence            5787777654 458999999999999999999999999999999999999999999999999998654333344556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      ..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+....    +                     
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~----~---------------------  213 (316)
T cd05619         160 PDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN----P---------------------  213 (316)
T ss_pred             ccccCHHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----C---------------------
Confidence            99999999976 568999999999999999999999998877665555443210    0                     


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCHH-HHhcCCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQ-QALEHRYFSSAPLP  300 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~-e~l~hp~~~~~~~~  300 (397)
                         .+...++.++++||.+||+.||++|+++. ++++||||....+.
T Consensus       214 ---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~  257 (316)
T cd05619         214 ---CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWS  257 (316)
T ss_pred             ---CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHH
Confidence               01123478999999999999999999996 89999999886553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=7e-48  Score=365.31  Aligned_cols=266  Identities=23%  Similarity=0.329  Sum_probs=218.6

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||+||+++++.+++.||+|++.+... .......+.+|+.++..++|+||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            579999999999999999999999999999999865322 2222334667999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~  168 (397)
                      ||+. |+|.+++.+....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~  160 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS  160 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence            9998 688888887666799999999999999999999999999999999999999999999999999976543222 22


Q ss_pred             cccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ...+||+.|+|||++.+    ...++.++|||||||++|||++|+.||.+.+..+.+..+.......   .         
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---~---------  228 (332)
T cd05623         161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF---Q---------  228 (332)
T ss_pred             cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc---c---------
Confidence            34578999999999863    3458899999999999999999999999888777776664321100   0         


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~~  300 (397)
                                 +......++.++++||.+||..++.+  |++++++++||||.+..+.
T Consensus       229 -----------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~  275 (332)
T cd05623         229 -----------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWD  275 (332)
T ss_pred             -----------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCHH
Confidence                       01112346899999999999765554  6899999999999886653

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.1e-47  Score=361.58  Aligned_cols=274  Identities=39%  Similarity=0.714  Sum_probs=214.4

Q ss_pred             eeeeeecCcEEEEEEEECC--CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCCeEEEEEEc
Q 015948           17 REVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGNLHLVFEF   92 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~~~lv~e~   92 (397)
                      ..+||+|+||+||+|++..  ++..||+|.+....    ....+.+|+.+|+.++||||+++++++.  .+..+|+||||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY   81 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence            3689999999999998653  66889999886432    2335678999999999999999999884  45688999999


Q ss_pred             cccCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE----ccCCcEEEeeecccee
Q 015948           93 METDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARI  160 (397)
Q Consensus        93 ~~g~L~~~~~~~--------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl----~~~~~~kl~DFG~a~~  160 (397)
                      ++++|...+...        ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++.
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867          82 AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             eCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            999998887532        2248899999999999999999999999999999999999    4567899999999987


Q ss_pred             eCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---------HHHHHHHHHHh
Q 015948          161 FGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---------IDQLGKIFAAF  228 (397)
Q Consensus       161 ~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---------~~~~~~i~~~~  228 (397)
                      ......   ......+|..|+|||++.+...++.++|||||||++|||++|.+||....+         ...+..++..+
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  241 (317)
T cd07867         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM  241 (317)
T ss_pred             cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence            654322   233456788999999997766789999999999999999999999976442         35567777777


Q ss_pred             CCCCCCCCCCCCCCcccccccc------ccCC----CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          229 GTATPSQWPDLAYLPDYVEYQY------VAAP----PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      +......|.+....+.+.....      ....    .........+..+.+||.+||+.||.+|||++|+|+||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            7776666665443332211110      0000    0111122346789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.4e-47  Score=359.24  Aligned_cols=285  Identities=42%  Similarity=0.731  Sum_probs=228.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----   84 (397)
                      ..++|.+.+.||+|+||.||+|.+..+++.||||.+............+.+|+.++++++||||+++++++...+     
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            356799999999999999999999999999999998765444444445678999999999999999999875543     


Q ss_pred             ---eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           85 ---NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        85 ---~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                         ..|+||||++++|...+...+..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++...
T Consensus        90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  169 (310)
T cd07865          90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAF  169 (310)
T ss_pred             CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence               56999999999999998877667999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCC----cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          162 GSPDR----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       162 ~~~~~----~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      .....    ......++..|+|||++.+...++.++|+|||||++|+|++|.+||.+.+....+..+....+...+..++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (310)
T cd07865         170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP  249 (310)
T ss_pred             cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence            43321    22344567789999998775667899999999999999999999999888877777777776666665555


Q ss_pred             CCCCCccccccccccCCC--c-ccc-CCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          238 DLAYLPDYVEYQYVAAPP--L-RSL-FPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~--~-~~~-~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      +.................  . ..+ ....+..+.+||.+||..||.+|||++|+++||||
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             cccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            543222111111100000  0 000 11236788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=9e-48  Score=364.41  Aligned_cols=282  Identities=26%  Similarity=0.422  Sum_probs=215.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||.||+|++..++..||+|.+..... ......+.+|+++|+.++||||+++++++..++.+|+||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence            5789999999999999999999999999999999875422 223446789999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||++| +|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++......  ..
T Consensus        83 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~  159 (331)
T cd06649          83 EHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA  159 (331)
T ss_pred             ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--cc
Confidence            99985 777777654 3589999999999999999999986 6999999999999999999999999999865332  23


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC-CCCCCc----
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP-DLAYLP----  243 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~----  243 (397)
                      ....++..|+|||++.+ ..++.++|||||||++|||++|+.||...+..+.. .++...........+ ......    
T Consensus       160 ~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (331)
T cd06649         160 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE-AIFGRPVVDGEEGEPHSISPRPRPPG  237 (331)
T ss_pred             ccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHhcccccccccCCccccCccccccc
Confidence            34568889999999976 56899999999999999999999999766544332 222110000000000 000000    


Q ss_pred             ------------cc--cc-ccc-ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          244 ------------DY--VE-YQY-VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       244 ------------~~--~~-~~~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                  ..  .. ..+ .............++++++||.+||.+||++|||+.++++||||....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence                        00  00 000 000000111124688999999999999999999999999999998644

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=4.9e-48  Score=366.17  Aligned_cols=266  Identities=23%  Similarity=0.322  Sum_probs=217.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||+||++++..+++.||+|++.+... .......+.+|+.++..++|+||++++++|.+.+.+|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            579999999999999999999999999999999875322 1222334667999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~  168 (397)
                      ||+. |+|..++.+....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  160 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS  160 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence            9998 588888877666799999999999999999999999999999999999999999999999999987654332 22


Q ss_pred             cccccCceeeChhcccCc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          169 THQVFARWYRAPELLFGA----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ...+|++.|+|||++.+.    ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......             
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-------------  227 (331)
T cd05624         161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF-------------  227 (331)
T ss_pred             ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc-------------
Confidence            335689999999998642    357889999999999999999999999887766666654321100             


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~~  300 (397)
                                ++......++.++++||.+||..++++  |++++++++|+||....+.
T Consensus       228 ----------~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~  275 (331)
T cd05624         228 ----------QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWE  275 (331)
T ss_pred             ----------cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHH
Confidence                      011122345899999999999876654  4689999999999876543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-48  Score=363.01  Aligned_cols=252  Identities=25%  Similarity=0.357  Sum_probs=212.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcE-EEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-eEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-NLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~-~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-~~~l   88 (397)
                      .+...+.+.||+|+||+||+|...  |.. ||+|++............+.+|+.+|.+++|||||++++++.+.. .+++
T Consensus        40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i  117 (362)
T KOG0192|consen   40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI  117 (362)
T ss_pred             hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence            445566777999999999999765  555 999999876544444667889999999999999999999998877 7999


Q ss_pred             EEEccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhHhCC-ccccCCCCCcEEEccCC-cEEEeeeccceeeCCC
Q 015948           89 VFEFME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKW-VLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSP  164 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~-ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~  164 (397)
                      ||||++ |+|..++.. .+..++...+..++.+|+.|+.|||+++ ||||||||+||||+.++ ++||||||+++.....
T Consensus       118 VtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  118 VTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             EEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            999999 678888877 3677999999999999999999999999 99999999999999998 9999999999987654


Q ss_pred             CCcccccccCceeeChhcccC-ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          165 DRRFTHQVFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      ....+...||..|||||++.+ ...|+.++||||||+++|||+||..||.+.........+......+            
T Consensus       198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp------------  265 (362)
T KOG0192|consen  198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRP------------  265 (362)
T ss_pred             cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC------------
Confidence            344555789999999999985 3679999999999999999999999999998866665554332111            


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    .+....++.+..|+.+||..||.+||+..+++.
T Consensus       266 --------------~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  266 --------------PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             --------------CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence                          111125789999999999999999999999875

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=9.3e-48  Score=363.64  Aligned_cols=254  Identities=25%  Similarity=0.366  Sum_probs=207.1

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||+||+|++..+++.||+|++.+.... ......+.+|+.++.++ .||||++++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4799999999999999999999999999865432 22233466899999888 689999999999999999999999984


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus        81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (327)
T cd05617          81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGT  159 (327)
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCC
Confidence             676666544 459999999999999999999999999999999999999999999999999998644334444567789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS------DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      +.|+|||++.+ ..++.++|||||||++|+|++|..||....      ..+.+.+....   . +               
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---~-~---------------  219 (327)
T cd05617         160 PNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE---K-P---------------  219 (327)
T ss_pred             cccCCHHHHCC-CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh---C-C---------------
Confidence            99999999976 568999999999999999999999996432      11222222111   0 0               


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC------HHHHhcCCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRYFSSAPLP  300 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t------~~e~l~hp~~~~~~~~  300 (397)
                              ..+...++..+.++|.+||..||++|++      .+++++||||....+.
T Consensus       220 --------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~  269 (327)
T cd05617         220 --------IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWD  269 (327)
T ss_pred             --------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence                    0122345889999999999999999998      5799999999987654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=4.2e-48  Score=365.17  Aligned_cols=252  Identities=25%  Similarity=0.391  Sum_probs=206.9

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHH-HHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREI-KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~-~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||+||+|++..+++.||+|++.+... .......+.+|+ .+++.++||||++++++|.+.+.+|+|||||+|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999999999999999975432 112223344555 467889999999999999999999999999985


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+.. ...+++..++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||+++............+|+
T Consensus        81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (321)
T cd05603          81 GELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGT  159 (321)
T ss_pred             CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCC
Confidence             67666654 4458999999999999999999999999999999999999999999999999988644444444556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.......+...     +                     
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-----~---------------------  212 (321)
T cd05603         160 PEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK-----P---------------------  212 (321)
T ss_pred             cccCCHHHhcC-CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC-----C---------------------
Confidence            99999999876 56899999999999999999999999887765555554321     0                     


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~  299 (397)
                        ..+.+..+.++.++|.+||+.||.+|+++    .++++|+||....+
T Consensus       213 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~  259 (321)
T cd05603         213 --LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW  259 (321)
T ss_pred             --CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence              01123457899999999999999999875    59999999987554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.8e-48  Score=366.92  Aligned_cols=252  Identities=24%  Similarity=0.375  Sum_probs=208.5

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHH-HHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREI-KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~-~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||+||+|++..+++.||+|++...... ......+..|. .+++.++||||++++++|...+.+|+||||+.|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4799999999999999999999999999754321 11222344444 457889999999999999999999999999995


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus        81 ~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt  159 (325)
T cd05602          81 GELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGT  159 (325)
T ss_pred             CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCC
Confidence             67666655 4458899999999999999999999999999999999999999999999999998654444444566789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+....                          
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--------------------------  212 (325)
T cd05602         160 PEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--------------------------  212 (325)
T ss_pred             ccccCHHHHcC-CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--------------------------
Confidence            99999999976 568999999999999999999999999887766666554320                          


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCHH----HHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQ----QALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~----e~l~hp~~~~~~~  299 (397)
                        ....+.++..+.+||.+||+.||.+|+++.    ++++|+||....+
T Consensus       213 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~  259 (325)
T cd05602         213 --LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW  259 (325)
T ss_pred             --cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence              012245689999999999999999999875    8999999987654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.1e-48  Score=369.13  Aligned_cols=275  Identities=24%  Similarity=0.350  Sum_probs=213.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ..+|.+.+.||+|+||.||+|++..++..||+|+....        ....|+.+++.++|+||+++++++......|+||
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            45799999999999999999999999999999974321        2346999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||+.|+|..++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... ......
T Consensus       137 e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~-~~~~~~  215 (357)
T PHA03209        137 PHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV-APAFLG  215 (357)
T ss_pred             EccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc-Cccccc
Confidence            9999999999988777899999999999999999999999999999999999999999999999999975432 222334


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCc---------HHHHHHHHHHhCCCCCCCCCCC-
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSD---------IDQLGKIFAAFGTATPSQWPDL-  239 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~---------~~~~~~i~~~~~~~~~~~~~~~-  239 (397)
                      ..||..|+|||++.+ ..++.++|||||||++|||+++ .++|.....         ...+..++..++.... .++.. 
T Consensus       216 ~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~  293 (357)
T PHA03209        216 LAGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE-EFPRDP  293 (357)
T ss_pred             ccccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh-hcCCCC
Confidence            568899999999976 5689999999999999999974 556554321         2333444444443322 22211 


Q ss_pred             --CCCccccccccccCCCccc----cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          240 --AYLPDYVEYQYVAAPPLRS----LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       240 --~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                        .....+..+......+...    ....++.++.+||.+||+.||++|||+.|+|+||||++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence              0000111111001011100    11245788999999999999999999999999999975

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=2.4e-47  Score=356.58  Aligned_cols=287  Identities=43%  Similarity=0.774  Sum_probs=239.6

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC---
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG---   84 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---   84 (397)
                      ....++|++.+.||+|+||+||+|.++.+|+.||+|.+............+.+|+.+++.++||||+++++++.+..   
T Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~   82 (302)
T cd07864           3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL   82 (302)
T ss_pred             hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence            45678999999999999999999999999999999999765544444456678999999999999999999886654   


Q ss_pred             -------eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948           85 -------NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        85 -------~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                             .+|+|+||+++++...+......+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||+
T Consensus        83 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~  162 (302)
T cd07864          83 DFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL  162 (302)
T ss_pred             hccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence                   8999999999999888887666799999999999999999999999999999999999999999999999999


Q ss_pred             ceeeCCCCC-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          158 ARIFGSPDR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       158 a~~~~~~~~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      +........ ......++..|+|||++.+...++.++|||||||++|+|++|++||...+..+.+..+....+...+..|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (302)
T cd07864         163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW  242 (302)
T ss_pred             cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence            987644332 2233445677999999876556789999999999999999999999999889999999888888888777


Q ss_pred             CCCCCCcccccccc--ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          237 PDLAYLPDYVEYQY--VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       237 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ++....+.......  .........+..++..+.+||.+||..||.+||++.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            76654443221111  11112333445678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=8.4e-48  Score=356.77  Aligned_cols=283  Identities=37%  Similarity=0.683  Sum_probs=228.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|.+............+.+|+++++.++||||+++++++..++..|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            57999999999999999999999999999999987654443344567789999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      |++++++..+......+++..++.++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++.............
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY  160 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence            99987666665555568999999999999999999999999999999999999999999999999998765544444556


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc---cccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD---YVEY  248 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~  248 (397)
                      .++..|+|||++.+...++.++|||||||++|+|++|.++|.+.+..+....+...++.............+.   ....
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07846         161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP  240 (286)
T ss_pred             cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence            7888999999987656678899999999999999999999998888777777776655432211000000000   0000


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ............+.++..+.+|+.+||..||++||++.++++|+||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            0001112233456789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=8.5e-48  Score=365.49  Aligned_cols=288  Identities=38%  Similarity=0.671  Sum_probs=234.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----C
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----G   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~   84 (397)
                      +.++|.+.+.||+|+||+||+|++..++..||||.+............+.+|+.+++.++|+||+++++++...     .
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN   82 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence            56789999999999999999999999999999999876433333344567899999999999999999987544     3


Q ss_pred             eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .+|+|+||++++|...+... ..+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus        83 ~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  161 (337)
T cd07858          83 DVYIVYELMDTDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK  161 (337)
T ss_pred             cEEEEEeCCCCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence            58999999999998888754 45999999999999999999999999999999999999999999999999999876544


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC--
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL--  242 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--  242 (397)
                      ........++..|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+...++...+..+......  
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07858         162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA  241 (337)
T ss_pred             cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence            333445567888999999876556899999999999999999999999988877777777777776655444211110  


Q ss_pred             cccc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          243 PDYV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       243 ~~~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ..+. .......+......+.+++++.+||.+||+.||++|||++++++||||....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            0000 0011112233445567899999999999999999999999999999997653

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=5.5e-48  Score=364.96  Aligned_cols=252  Identities=25%  Similarity=0.374  Sum_probs=208.2

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHH-HHHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIK-LLKELKSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~-~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||+||+|++..+|+.||+|++.+.... ......+..|.. +++.++||||++++++|..++.+|+||||+.|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4699999999999999999999999999754321 222234455554 57789999999999999999999999999985


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|...+.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++............+|+
T Consensus        81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  159 (325)
T cd05604          81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGT  159 (325)
T ss_pred             CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCC
Confidence             66666654 4569999999999999999999999999999999999999999999999999997654334444556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      +.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+....                          
T Consensus       160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~--------------------------  212 (325)
T cd05604         160 PEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP--------------------------  212 (325)
T ss_pred             hhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence            99999999976 568899999999999999999999999877666655554310                          


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~  299 (397)
                        ....+.++..+.++|.+||..||.+||++    .++++||||....+
T Consensus       213 --~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~  259 (325)
T cd05604         213 --LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSW  259 (325)
T ss_pred             --ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence              01123468899999999999999999976    58999999987544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-48  Score=369.59  Aligned_cols=252  Identities=24%  Similarity=0.370  Sum_probs=206.9

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhc---CCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL---KSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      ||+|+||+||+|++..+|+.||||++.+.... .........|..++..+   .||||+++++.|.+...+|+||||+. 
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            79999999999999999999999998754321 12222345677777765   69999999999999999999999998 


Q ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      |+|...+.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.............+||
T Consensus        81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt  159 (330)
T cd05586          81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT  159 (330)
T ss_pred             ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence            477766665 4459999999999999999999999999999999999999999999999999997654444444556789


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      ..|+|||++.+...++.++|||||||++|+|++|..||.+.+..+.+..+.....     .++                 
T Consensus       160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----~~~-----------------  217 (330)
T cd05586         160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV-----RFP-----------------  217 (330)
T ss_pred             ccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC-----CCC-----------------
Confidence            9999999997756689999999999999999999999988776655555432100     000                 


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCC----CHHHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARI----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~----t~~e~l~hp~~~~~~~  299 (397)
                           ...+++++.+||.+||..||.+||    +++++++||||....+
T Consensus       218 -----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~  261 (330)
T cd05586         218 -----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDW  261 (330)
T ss_pred             -----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCH
Confidence                 013488999999999999999998    7999999999987543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-47  Score=352.56  Aligned_cols=283  Identities=42%  Similarity=0.736  Sum_probs=231.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++............+.+|+++++.++|+||+++++.+..++..|+|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            47999999999999999999999999999999987655545555678899999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTH  170 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~~~  170 (397)
                      |++++++..+......+++..++.++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++........ ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence            999888877766666699999999999999999999999999999999999999999999999999987654433 3445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++.+|+|||++.+...++.++|+|||||++|+|++|.+||.+.+..+.+..+...++...+..+..............
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF  240 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence            66788899999998754789999999999999999999999998888887777777666555433322221111111000


Q ss_pred             cc---CCCccccCC-CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 VA---APPLRSLFP-SASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 ~~---~~~~~~~~~-~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ..   .......++ .++.++++||.+||..+|++||+++++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            00   000111222 348999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.7e-47  Score=370.60  Aligned_cols=283  Identities=26%  Similarity=0.359  Sum_probs=220.5

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ...+..+|.+.+.||+|+||.||+|...  .++..||+|.+....       ...+|+.+|+.++||||++++++|....
T Consensus        87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~  159 (392)
T PHA03207         87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKS  159 (392)
T ss_pred             chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCC
Confidence            3445678999999999999999999754  356789999875431       3457999999999999999999999999


Q ss_pred             eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .+|+|||++.++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus       160 ~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        160 TVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             EEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence            9999999999999998843 456999999999999999999999999999999999999999999999999999876433


Q ss_pred             CC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHHHhCCCCCCCCCCC
Q 015948          165 DR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       165 ~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      ..  ......||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+..   ....+..+...++..... ++..
T Consensus       239 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~-~~~~  316 (392)
T PHA03207        239 PDTPQCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE-FPQN  316 (392)
T ss_pred             cccccccccccccCccCHhHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc-cCCc
Confidence            22  2234578999999999976 568999999999999999999998887653   356666677666543322 1111


Q ss_pred             CCC---ccccccccccCCCc--ccc--CCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          240 AYL---PDYVEYQYVAAPPL--RSL--FPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       240 ~~~---~~~~~~~~~~~~~~--~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ...   .....+.....++.  ...  ....+.++.+||.+||..||++|||+.|+|.||||...++
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence            000   00001111111110  011  1235778999999999999999999999999999986543

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.8e-47  Score=372.85  Aligned_cols=275  Identities=23%  Similarity=0.303  Sum_probs=213.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ..+|.+.+.||+|+||.||+|.+..+++.||||...        ...+.+|+.+|++++|+|||++++++..++..|+||
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~  239 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL  239 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            558999999999999999999999999999999632        123568999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RF  168 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~  168 (397)
                      |++.++|..++......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.......  ..
T Consensus       240 e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~  319 (461)
T PHA03211        240 PKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH  319 (461)
T ss_pred             EccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence            9999999999887666799999999999999999999999999999999999999999999999999987643221  12


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC-CCCCCC------cHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP-FLQGSS------DIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~-pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ....||..|+|||++.+ ..++.++|||||||+||||++|.. +|....      ....+.+++...+.... .++....
T Consensus       320 ~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~  397 (461)
T PHA03211        320 YGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD-EFPQHAG  397 (461)
T ss_pred             cccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc-cCCCCcc
Confidence            23568999999999977 568999999999999999998764 454332      13445555544332211 1111000


Q ss_pred             ---Cccccc------cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          242 ---LPDYVE------YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       242 ---~~~~~~------~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                         ...+..      ......+.+ ..+..++.++.+||.+||+.||.+|||+.|+|+||||++
T Consensus       398 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        398 SRLVSQYRHRAARNRRPAYTRPAW-TRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             hHHHHHHHhhhhcccCCccCCcch-hhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence               000000      000000111 112246789999999999999999999999999999974

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-49  Score=375.02  Aligned_cols=261  Identities=26%  Similarity=0.430  Sum_probs=222.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+.|.|+..||.|+||.||+|.++.++-..|.|+|..  ..+.....++-||.||..+.||+||+|+++|..++.++|+.
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili  108 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI  108 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence            5678899999999999999999998888888998853  23334456778999999999999999999999999999999


Q ss_pred             EccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |||+|+ ....+..-+..|.+.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+......-....
T Consensus       109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRD  188 (1187)
T KOG0579|consen  109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRD  188 (1187)
T ss_pred             eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhc
Confidence            999965 5556666677799999999999999999999999999999999999999999999999999877655555667


Q ss_pred             ccccCceeeChhccc----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          170 HQVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ..+|||+|||||++.    ...+|++++||||||++|.||.-+.||...-+.-.++-+|.+.   .              
T Consensus       189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---e--------------  251 (1187)
T KOG0579|consen  189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---E--------------  251 (1187)
T ss_pred             cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---C--------------
Confidence            899999999999973    3467999999999999999999999998877776666665442   1              


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                              |+.---+...|..+.||+.+||.+||..||+++++|+||||++.+
T Consensus       252 --------PPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  252 --------PPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP  296 (1187)
T ss_pred             --------CCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence                    111111233478999999999999999999999999999998654

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-47  Score=352.46  Aligned_cols=281  Identities=59%  Similarity=0.980  Sum_probs=239.0

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      |.+.+.||.|++|.||+|.+..+|+.+++|.+............+.+|+.+++.++|+||+++++++.++..+|+|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            67889999999999999999999999999998765544444556778999999999999999999999999999999999


Q ss_pred             ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948           94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF  173 (397)
Q Consensus        94 ~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  173 (397)
                      ++++.+.+......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+..............+
T Consensus        81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~  160 (283)
T cd05118          81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVV  160 (283)
T ss_pred             CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccC
Confidence            99999998887677999999999999999999999999999999999999999999999999999887655434445667


Q ss_pred             CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc--c
Q 015948          174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY--V  251 (397)
Q Consensus       174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~  251 (397)
                      +..|+|||.+.+...++.++|+|||||++|+|++|+++|.+.+..+.+..+...++...+..|+............+  .
T Consensus       161 ~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd05118         161 TRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKK  240 (283)
T ss_pred             cccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccc
Confidence            88899999997755789999999999999999999999999999998888888877776666655443222222111  1


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .........+.++.++.+||.+||..||.+||++.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         241 AGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             cccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            1222334455678999999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-47  Score=357.51  Aligned_cols=282  Identities=41%  Similarity=0.770  Sum_probs=225.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECC--CCcEEEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLH   87 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~--~~~~~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~   87 (397)
                      +|.+.+.||+|+||.||+|.+..  ++..||+|.+.... ........+.+|+.+++.++||||+++++++.+.  ..+|
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            58999999999999999999988  88999999998644 2233344567899999999999999999999888  8899


Q ss_pred             EEEEccccCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc----CCcEEEeeeccce
Q 015948           88 LVFEFMETDLETVIRNT----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLAR  159 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~----~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~----~~~~kl~DFG~a~  159 (397)
                      +||||+++++...+...    ...+++..++.++.||+.||.|||++||+||||||+||+++.    ++.+||+|||++.
T Consensus        81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~  160 (316)
T cd07842          81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR  160 (316)
T ss_pred             EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence            99999999888877543    236899999999999999999999999999999999999999    8999999999998


Q ss_pred             eeCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---------HHHHHHHHH
Q 015948          160 IFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI---------DQLGKIFAA  227 (397)
Q Consensus       160 ~~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---------~~~~~i~~~  227 (397)
                      .......   ......++..|+|||++.+...++.++|||||||++|+|++|.+||.+....         ..+..++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T cd07842         161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV  240 (316)
T ss_pred             ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence            7644332   2233466888999999877667899999999999999999999999876542         356667777


Q ss_pred             hCCCCCCCCCCCCCCcccccccccc----C--CCccc---cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVA----A--PPLRS---LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~---~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ++...+..|.+...++++.......    .  .....   .....+.++.++|.+||+.||++|||+.|+++||||
T Consensus       241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            7766666555444443332210000    0  00000   011567899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=2.9e-47  Score=361.44  Aligned_cols=290  Identities=38%  Similarity=0.670  Sum_probs=233.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee----cCCe
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP----HKGN   85 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~----~~~~   85 (397)
                      +.++|.+.+.||.|+||.||+|.+..+|..||+|++............+.+|+.+|+.++||||++++++|.    ....
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence            568999999999999999999999999999999998765433334456678999999999999999999875    3457


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      +|+||||++|+|...+... ..+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||++.......
T Consensus        83 ~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  161 (334)
T cd07855          83 VYVVMDLMESDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP  161 (334)
T ss_pred             EEEEEehhhhhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence            8999999999988887654 449999999999999999999999999999999999999999999999999998764332


Q ss_pred             C----cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 R----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~----~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .    .....+++.+|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+...++.+.+..+.....
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  241 (334)
T cd07855         162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS  241 (334)
T ss_pred             cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence            1    123456788899999987656689999999999999999999999999888888888777777655443322110


Q ss_pred             C--cccc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          242 L--PDYV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       242 ~--~~~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      -  .... .+......++....+..+.++.+||.+||+.||.+||++++++.||||.....+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~  303 (334)
T cd07855         242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP  303 (334)
T ss_pred             hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence            0  0000 011111222334456779999999999999999999999999999999865443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-47  Score=360.91  Aligned_cols=287  Identities=39%  Similarity=0.680  Sum_probs=226.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----C
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----G   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~   84 (397)
                      +.++|.+.+.||+|+||.||+|++..+|+.||+|++..... ......+.+|+.+++.++|+||+++++++...     .
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence            56899999999999999999999999999999999864322 22334567899999999999999999876543     4


Q ss_pred             eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .+|+|+||+++++...+...  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        82 ~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  159 (336)
T cd07849          82 DVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE  159 (336)
T ss_pred             eEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence            68999999999998887653  4899999999999999999999999999999999999999999999999999876433


Q ss_pred             CC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 DR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ..   .....+++..|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+...++...+..+.....
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (336)
T cd07849         160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS  239 (336)
T ss_pred             ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence            22   123356788899999987656789999999999999999999999998877777777777666544433221110


Q ss_pred             Ccc--cc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          242 LPD--YV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       242 ~~~--~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ...  +. ........++....+.++.++.+||.+||+.||++|||+.|+++||||.....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence            000  00 00001111222334567899999999999999999999999999999986543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-49  Score=364.94  Aligned_cols=260  Identities=29%  Similarity=0.425  Sum_probs=226.6

Q ss_pred             hhcceee--eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLK--REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i--~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      +..-|+|  .++||+|.||+||-|+++++|+.||||+|.+..........+++|+.||..+.||.||.+-..|+..+.++
T Consensus       560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervF  639 (888)
T KOG4236|consen  560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVF  639 (888)
T ss_pred             HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEE
Confidence            3445555  68999999999999999999999999999998877777778889999999999999999999999999999


Q ss_pred             EEEEccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeeccceeeCC
Q 015948           88 LVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGS  163 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~a~~~~~  163 (397)
                      +|||.+.||.+..|... .+.+++...+.++.||+.||+|||.+||+|+||||+|||+.+.   -++||||||+|++++.
T Consensus       640 VVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE  719 (888)
T KOG4236|consen  640 VVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE  719 (888)
T ss_pred             EEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence            99999999999998765 5679999999999999999999999999999999999999765   3699999999999865


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . ......+||+.|+|||++.. +.|+.+-|+||+|||+|.-+.|..||....  +.-.+|.+.--..++..|       
T Consensus       720 k-sFRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW-------  788 (888)
T KOG4236|consen  720 K-SFRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPW-------  788 (888)
T ss_pred             h-hhhhhhcCCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCch-------
Confidence            3 34567889999999999987 789999999999999999999998886544  344455444333334444       


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                       ..+|+++.|||..+|+..-++|.+.++.|.|||+++-
T Consensus       789 -----------------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  789 -----------------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             -----------------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence                             3569999999999999999999999999999999864

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2e-50  Score=352.15  Aligned_cols=263  Identities=27%  Similarity=0.422  Sum_probs=226.6

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      +.-.+-|.++++||+|+||.||+|.|+.+|..+|||.+...    ...+.+.+|+.|+.++..|++|++|+.|-....++
T Consensus        29 K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLW  104 (502)
T KOG0574|consen   29 KPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLW  104 (502)
T ss_pred             CChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceE
Confidence            33467789999999999999999999999999999998643    33456889999999999999999999988888999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      ||||||+ |+..+.++.++.+++++++..+++..+.||+|||...-+|||||..|||++.+|..||+|||.|-.+.+.-.
T Consensus       105 IVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA  184 (502)
T KOG0574|consen  105 IVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA  184 (502)
T ss_pred             eehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence            9999999 899999999999999999999999999999999999999999999999999999999999999988877667


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ...+.+||+.|||||++.. ..|+..+||||||++..||..|+||+.+-..   +..|+....                 
T Consensus       185 KRNTVIGTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---MRAIFMIPT-----------------  243 (502)
T KOG0574|consen  185 KRNTVIGTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHP---MRAIFMIPT-----------------  243 (502)
T ss_pred             hhCccccCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCcccccc---cceeEeccC-----------------
Confidence            7778999999999999975 7799999999999999999999999875432   122221111                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                           ..|+.-..+...|.++.|||++||.++|++|.|+.++++|||.++.+..
T Consensus       244 -----~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~  292 (502)
T KOG0574|consen  244 -----KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC  292 (502)
T ss_pred             -----CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence                 1112222223458999999999999999999999999999999887543

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.9e-46  Score=384.67  Aligned_cols=267  Identities=26%  Similarity=0.400  Sum_probs=218.7

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--   82 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--   82 (397)
                      +....+.++|++++.||+|+||+||+|++..++..||+|++............+.+|+.+|+.|+|||||+++++|.+  
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~   85 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA   85 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence            446667889999999999999999999999999999999998665444445567889999999999999999998844  


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhC-------CccccCCCCCcEEEccC----
Q 015948           83 KGNLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKK-------WVLHRDMKPNNLLIGSH----  147 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~-------~ivHrDlkp~NILl~~~----  147 (397)
                      ...+|||||||. |+|..++...   ...+++..++.|+.||+.||.|||+.       +|+||||||+||||+.+    
T Consensus        86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l  165 (1021)
T PTZ00266         86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI  165 (1021)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence            467999999998 5888887653   34699999999999999999999984       49999999999999642    


Q ss_pred             -------------CcEEEeeeccceeeCCCCCcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCC
Q 015948          148 -------------GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQ  213 (397)
Q Consensus       148 -------------~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~  213 (397)
                                   +.+||+|||++..+... ......+||+.|+|||++.+. ..++.++||||||||||+|++|..||.
T Consensus       166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~-s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~  244 (1021)
T PTZ00266        166 GKITAQANNLNGRPIAKIGDFGLSKNIGIE-SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH  244 (1021)
T ss_pred             ccccccccccCCCCceEEccCCcccccccc-ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                         34899999999876432 233456789999999998642 458899999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          214 GSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       214 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                      ..+....+...+...   ..                        ......+.++.+||..||..+|.+||++.|+|.|+|
T Consensus       245 ~~~~~~qli~~lk~~---p~------------------------lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~  297 (1021)
T PTZ00266        245 KANNFSQLISELKRG---PD------------------------LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQI  297 (1021)
T ss_pred             cCCcHHHHHHHHhcC---CC------------------------CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence            776655444333211   00                        001234789999999999999999999999999999


Q ss_pred             CCCCCC
Q 015948          294 FSSAPL  299 (397)
Q Consensus       294 ~~~~~~  299 (397)
                      +.....
T Consensus       298 ik~i~~  303 (1021)
T PTZ00266        298 IKNVGP  303 (1021)
T ss_pred             HhhcCC
Confidence            986544

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=8.5e-48  Score=351.40  Aligned_cols=259  Identities=34%  Similarity=0.539  Sum_probs=215.1

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      |++.+.||+|+||+||+|++..+++.||+|++..............+|+.++++++|+||+++++++.+....|+||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999999999877654444444456999999999999999999999999999999999


Q ss_pred             cc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948           94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV  172 (397)
Q Consensus        94 ~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~  172 (397)
                      .+ +|..++.. ...+++..+..++.||+.||.+||++||+|+||||+||+++.++.++|+|||.+..............
T Consensus        81 ~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  159 (260)
T PF00069_consen   81 PGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV  159 (260)
T ss_dssp             TTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred             ccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            96 88888873 34589999999999999999999999999999999999999999999999999987544445566677


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA  252 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (397)
                      ++..|+|||++.....++.++|+||||+++|+|++|..||......+....+...........+.               
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------  224 (260)
T PF00069_consen  160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ---------------  224 (260)
T ss_dssp             SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT---------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc---------------
Confidence            88899999998734678999999999999999999999999874444443333221110000000               


Q ss_pred             CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                            .....+..+.++|.+||+.||++||++.++++||||
T Consensus       225 ------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  225 ------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             ------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             ------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence                  000113789999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=4.7e-47  Score=376.39  Aligned_cols=261  Identities=25%  Similarity=0.373  Sum_probs=218.4

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC---
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG---   84 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---   84 (397)
                      ....++|.+.+.||+|+||+||+|++..+|+.||||++............+.+|+.++..++|+||+++++.|....   
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence            34578999999999999999999999999999999999776544444456778999999999999999988774332   


Q ss_pred             -----eEEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeee
Q 015948           85 -----NLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF  155 (397)
Q Consensus        85 -----~~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DF  155 (397)
                           .+++||||+. |+|.+.+...   ...+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+||
T Consensus       108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF  187 (496)
T PTZ00283        108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF  187 (496)
T ss_pred             cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence                 4789999998 6888887643   346899999999999999999999999999999999999999999999999


Q ss_pred             ccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948          156 GLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP  233 (397)
Q Consensus       156 G~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  233 (397)
                      |+++.+....  ......+||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+.+..+.....    
T Consensus       188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~----  262 (496)
T PTZ00283        188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY----  262 (496)
T ss_pred             ccCeeccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC----
Confidence            9998764321  22345678999999999976 5689999999999999999999999988776665555433210    


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                             ..+.+.+++++.+||.+||..||.+||++.++++|||+..
T Consensus       263 -----------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        263 -----------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             -----------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence                                   1123456899999999999999999999999999999764

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.2e-47  Score=359.64  Aligned_cols=287  Identities=42%  Similarity=0.694  Sum_probs=238.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----eEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NLH   87 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----~~~   87 (397)
                      +|.+.+.||.|+||.||+|++..+++.||||++............+.+|+.+++.++|+||+++++++....     .+|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            699999999999999999999999999999998765433444456788999999999999999999987765     799


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--  165 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--  165 (397)
                      +||||++++|...+.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......  
T Consensus        81 lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~  159 (330)
T cd07834          81 IVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE  159 (330)
T ss_pred             EEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence            999999998888887644 69999999999999999999999999999999999999999999999999998875543  


Q ss_pred             -CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC--CCCC
Q 015948          166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD--LAYL  242 (397)
Q Consensus       166 -~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~  242 (397)
                       .......++.+|+|||++.+...++.++|+|||||++|+|++|.+||.+.+..+.+..++..++...+..+..  ....
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  239 (330)
T cd07834         160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA  239 (330)
T ss_pred             cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence             2344556788999999998754789999999999999999999999999999999999988887766554431  1111


Q ss_pred             ccccc-cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          243 PDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       243 ~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      ..+.. ........+....+.++.++.+||.+||+.||.+|||+++++.||||.+...+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            11111 11112223444566789999999999999999999999999999999875543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-47  Score=349.87  Aligned_cols=281  Identities=52%  Similarity=0.904  Sum_probs=240.2

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      |++.+.||+|+||.||+|++..+++.||+|++............+.+|+.+++.++|+||+++++++.+.+.+|+||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            67889999999999999999999999999999876544445556778999999999999999999999999999999999


Q ss_pred             ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948           94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF  173 (397)
Q Consensus        94 ~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  173 (397)
                      +++|.+++.+....+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||.+..............+
T Consensus        81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (282)
T cd07829          81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV  160 (282)
T ss_pred             CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcccc
Confidence            99999999877556999999999999999999999999999999999999999999999999999877655444555666


Q ss_pred             CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc-cccccccc
Q 015948          174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD-YVEYQYVA  252 (397)
Q Consensus       174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  252 (397)
                      +..|+|||.+.+...++.++|+|||||++|||++|.+||.+.+..+.+.++...++......|+....... ...+....
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (282)
T cd07829         161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP  240 (282)
T ss_pred             CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccC
Confidence            77899999987755789999999999999999999999999998888999988888777776665544431 11111122


Q ss_pred             CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .......++.++..+.++|.+||..||++||++++++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         241 PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            223344556678999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-48  Score=341.57  Aligned_cols=265  Identities=27%  Similarity=0.390  Sum_probs=217.0

Q ss_pred             Chhhhcceee-eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948            7 SKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG   84 (397)
Q Consensus         7 ~~~~~~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~   84 (397)
                      +..+.+-|.+ .+.||+|+|+.|-.|...++|..||||++.+.  ......+.++|++++.+++ |+||++|+++|+++.
T Consensus        72 ~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   72 SGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             cchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            4456777877 56789999999999999999999999999865  3334557889999999994 999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cEEEeeecccee
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARI  160 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~kl~DFG~a~~  160 (397)
                      .+|+|||.|. |.|+..|.++.. |++.++..++..|+.||+|||.+||.||||||+|||.....   -+|||||.+..-
T Consensus       150 ~FYLVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             eEEEEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence            9999999998 589999987654 99999999999999999999999999999999999997654   489999988754


Q ss_pred             eCC-------CCCcccccccCceeeChhccc----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-----------
Q 015948          161 FGS-------PDRRFTHQVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-----------  218 (397)
Q Consensus       161 ~~~-------~~~~~~~~~~t~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-----------  218 (397)
                      ...       ......+.+|+..|||||+..    ....|+.+.|.||||||||-||.|.+||.|.-..           
T Consensus       229 ~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr  308 (463)
T KOG0607|consen  229 IKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR  308 (463)
T ss_pred             cccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence            311       112355677888899999962    3456999999999999999999999999876321           


Q ss_pred             ----HHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          219 ----DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       219 ----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                          ...+.|.++--..+.                        .-|..+|.+++|||+.+|..|+.+|.++.++++|||+
T Consensus       309 ~CQ~~LFesIQEGkYeFPd------------------------kdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~  364 (463)
T KOG0607|consen  309 VCQNKLFESIQEGKYEFPD------------------------KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV  364 (463)
T ss_pred             HHHHHHHHHHhccCCcCCh------------------------hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence                222333332222222                        2234579999999999999999999999999999999


Q ss_pred             CCCC
Q 015948          295 SSAP  298 (397)
Q Consensus       295 ~~~~  298 (397)
                      ....
T Consensus       365 ~~~~  368 (463)
T KOG0607|consen  365 QRCA  368 (463)
T ss_pred             cccc
Confidence            8654

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1.1e-46  Score=360.27  Aligned_cols=284  Identities=36%  Similarity=0.572  Sum_probs=224.2

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----   83 (397)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||||.+............+.+|+.+++.++|+||++++++|...     
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence            468999999999999999999999999999999999865443333344567899999999999999999988543     


Q ss_pred             -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                       ..+|+||||+.++|...+...   +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus        93 ~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  169 (353)
T cd07850          93 FQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  169 (353)
T ss_pred             cCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence             357999999999998887643   8899999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+...++.+....+......
T Consensus       170 ~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T cd07850         170 TSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT  247 (353)
T ss_pred             CCC-CCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence            432 2334567888999999976 56899999999999999999999999988888888888777665433211110000


Q ss_pred             cc-cc-------c--ccc----ccCCC-ccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 PD-YV-------E--YQY----VAAPP-LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 ~~-~~-------~--~~~----~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      .. +.       .  +..    ...+. ........+..+++||.+||+.||++|||+.|+|.||||...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~  317 (353)
T cd07850         248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW  317 (353)
T ss_pred             hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence            00 00       0  000    00000 000012346779999999999999999999999999998743

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.1e-46  Score=348.04  Aligned_cols=257  Identities=26%  Similarity=0.387  Sum_probs=205.3

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL   97 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L   97 (397)
                      ||+|+||+||++++..+|+.||+|.+....... .....+..|+++++.++||||+++++.|.++.++|+||||+. |+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999999999999999987543222 122345579999999999999999999999999999999998 577


Q ss_pred             HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCce
Q 015948           98 ETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW  176 (397)
Q Consensus        98 ~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~  176 (397)
                      ...+... ...+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....... ......++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~  159 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGTNG  159 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCCCC
Confidence            7776543 3358899999999999999999999999999999999999999999999999998764422 2334567888


Q ss_pred             eeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCc
Q 015948          177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL  256 (397)
Q Consensus       177 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (397)
                      |+|||++.+ ..++.++|+|||||++|+|++|..||.+.........+........                       .
T Consensus       160 y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~  215 (277)
T cd05607         160 YMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE-----------------------V  215 (277)
T ss_pred             ccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc-----------------------c
Confidence            999999976 4589999999999999999999999976543222222222110000                       0


Q ss_pred             cccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCCCC
Q 015948          257 RSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPLPT  301 (397)
Q Consensus       257 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~~~  301 (397)
                      ......++.++++||.+||+.||++||++    ++++.|+||....++.
T Consensus       216 ~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~  264 (277)
T cd05607         216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPR  264 (277)
T ss_pred             ccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHH
Confidence            00112458899999999999999999999    6788999998766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-48  Score=349.74  Aligned_cols=283  Identities=30%  Similarity=0.552  Sum_probs=228.6

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC--CC----eeEEEee
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PH----IIELIDA   79 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--p~----iv~l~~~   79 (397)
                      .++.+.++|.++..||+|.||.|-.+++..++..||||+++..   ....+.++-|+++|.++.+  |+    +|++.++
T Consensus        83 ~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w  159 (415)
T KOG0671|consen   83 VGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDW  159 (415)
T ss_pred             eccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh
Confidence            3566799999999999999999999999999999999998643   3344566779999999943  32    7888999


Q ss_pred             eecCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc------------
Q 015948           80 FPHKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS------------  146 (397)
Q Consensus        80 ~~~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~------------  146 (397)
                      |...++.|||+|.++-++.+++.+.+ .+++...++.+++||+++++|||+.+++|.||||||||+.+            
T Consensus       160 FdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~  239 (415)
T KOG0671|consen  160 FDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK  239 (415)
T ss_pred             hhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence            99999999999999999999998854 46999999999999999999999999999999999999842            


Q ss_pred             --------CCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH
Q 015948          147 --------HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI  218 (397)
Q Consensus       147 --------~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~  218 (397)
                              +..|+|+|||.|+......   ...+.|+.|+|||++++ -+++..+||||+||||+||.+|..+|+++++.
T Consensus       240 ~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~  315 (415)
T KOG0671|consen  240 VCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENL  315 (415)
T ss_pred             cceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence                    2248999999998753322   56788999999999998 67999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCC-----------------CCCCCCCccccccccccCCCccccCCCCCH---HHHHHHHHhcCcC
Q 015948          219 DQLGKIFAAFGTATPSQ-----------------WPDLAYLPDYVEYQYVAAPPLRSLFPSASD---DALDLLSKMFTYD  278 (397)
Q Consensus       219 ~~~~~i~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---~~~~li~~~L~~d  278 (397)
                      ++++-|-..+| +.|..                 |++...-.+ ..+......++..+...-+.   .+.|||.+||.+|
T Consensus       316 EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~-~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD  393 (415)
T KOG0671|consen  316 EHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGK-SKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD  393 (415)
T ss_pred             HHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCcccccccc-chhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence            99976666666 33322                 222221111 11222223334444433333   4779999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 015948          279 PKARITAQQALEHRYFSSA  297 (397)
Q Consensus       279 P~~R~t~~e~l~hp~~~~~  297 (397)
                      |.+|+|+.|+|.||||...
T Consensus       394 P~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  394 PARRITLREALSHPFFARL  412 (415)
T ss_pred             ccccccHHHHhcCHHhhcC
Confidence            9999999999999999864

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1e-46  Score=357.34  Aligned_cols=281  Identities=26%  Similarity=0.425  Sum_probs=213.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||.||+|.+..++..+|+|.+..... ......+.+|+++++.++|+||++++++|.+++.+|+||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            5789999999999999999999999999999999875432 223345779999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||+. |+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.+|.+||+|||++......  ..
T Consensus        83 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~  159 (333)
T cd06650          83 EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA  159 (333)
T ss_pred             ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--cc
Confidence            9998 5787777654 4589999999999999999999985 7999999999999999999999999999765332  22


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC-------
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY-------  241 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------  241 (397)
                      ....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||......+.. .++.......+........       
T Consensus       160 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (333)
T cd06650         160 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE-LMFGCPVEGDPAESETSPRPRPPGRP  237 (333)
T ss_pred             ccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH-HHhcCcccCCccccccCcccCCccch
Confidence            33467888999999976 56899999999999999999999999866543322 2211100000000000000       


Q ss_pred             ----Ccc---------ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          242 ----LPD---------YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       242 ----~~~---------~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                          .++         ...+. .............+.++++||.+||++||++|||++|++.|+||+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         238 LSSYGPDSRPPMAIFELLDYI-VNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             hhhhcccccccccHHHHHHHH-hcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence                000         00000 000000001123578999999999999999999999999999997643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-46  Score=347.58  Aligned_cols=281  Identities=46%  Similarity=0.834  Sum_probs=234.5

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEEEEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHLVFE   91 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~lv~e   91 (397)
                      |.+.+.||.|+||.||+|.+..+++.+|+|.+............+.+|+.+++.++|+|++++++++...  +..|+|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            7889999999999999999999999999999987653444445677899999999999999999999888  89999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTH  170 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~~~  170 (397)
                      |++++|...+......+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++........ ....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (287)
T cd07840          81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN  160 (287)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence            999999999887756799999999999999999999999999999999999999999999999999987654432 2334


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||.+.+...++.++|||||||++|+|++|.+||...+....+..+....+......|+....+........
T Consensus       161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd07840         161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP  240 (287)
T ss_pred             cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc
Confidence            45677899999887656688999999999999999999999999888888888888877777777766544321111111


Q ss_pred             --ccCCCccccCCCC-CHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 --VAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 --~~~~~~~~~~~~~-s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                        .....+...+... +..+.++|.+||..||.+||++.++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence              0111122233333 8999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.3e-46  Score=349.08  Aligned_cols=261  Identities=26%  Similarity=0.382  Sum_probs=211.0

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .|++.+.||+|+||+||+|.+..+++.||+|.+........ ....+.+|+.+++.++|++|+++++.+.+++.+|+|||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            47889999999999999999999999999999876543222 22346689999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |+. |+|...+... ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....... ...
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~  159 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIK  159 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-ccc
Confidence            998 5777776543 3358999999999999999999999999999999999999999999999999997653322 223


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...|+..|+|||++.+ ..++.++|||||||++|+|++|.+||....................                 
T Consensus       160 ~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~-----------------  221 (285)
T cd05630         160 GRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ-----------------  221 (285)
T ss_pred             CCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh-----------------
Confidence            4578889999999976 5689999999999999999999999987543221111111100000                 


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL  299 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~  299 (397)
                             ......+++++.+||.+||+.||++|+|     ++|+++||||....+
T Consensus       222 -------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05630         222 -------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINF  269 (285)
T ss_pred             -------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCH
Confidence                   0112345789999999999999999999     999999999976433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.7e-46  Score=347.12  Aligned_cols=277  Identities=40%  Similarity=0.669  Sum_probs=220.9

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecC--CeEEEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK--GNLHLVF   90 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~--~~~~lv~   90 (397)
                      |.+.+.||+|+||.||+|.+..++..||+|.+....... ......+|+.+++++. |+||+++++++.++  +.+++||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~   79 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF   79 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence            788999999999999999999999999999987543222 2234457999999985 99999999999887  8999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||++|++++.+......+++..++.++.||+.||.|||++|++||||||+||+++. +.+||+|||+++...... ....
T Consensus        80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-~~~~  157 (282)
T cd07831          80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-PYTE  157 (282)
T ss_pred             ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC-CcCC
Confidence            99999999998876667999999999999999999999999999999999999999 999999999998764332 2234


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc--
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY--  248 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--  248 (397)
                      ..++..|+|||++.+...++.++|||||||++|||++|.+||.+.+..+.+..+....+........... ......+  
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  236 (282)
T cd07831         158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR-KSRHMNYNF  236 (282)
T ss_pred             CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc-ccccccccC
Confidence            5678889999987665667899999999999999999999999988877777776655543321100000 0000000  


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .......+....+.++.++.+||.+||..||++||+++++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            0001111233345678999999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=5.3e-46  Score=339.20  Aligned_cols=254  Identities=25%  Similarity=0.418  Sum_probs=213.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv~e   91 (397)
                      +|++.+.||+|++|.||++.+..+++.||+|.+............+.+|+.+++.++|+|++++++.+.. +..+|+|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            5999999999999999999999999999999997654444444567789999999999999999998864 457899999


Q ss_pred             ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |++ ++|.+.+... ...+++..++.++.+++.||.+||++|++||||||+||+++.++.++|+|||++...........
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  160 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS  160 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence            998 5788777763 34589999999999999999999999999999999999999999999999999987755444445


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...+++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+.....                    
T Consensus       161 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--------------------  219 (257)
T cd08223         161 TLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL--------------------  219 (257)
T ss_pred             cccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--------------------
Confidence            5667888999999876 5688899999999999999999999987665554444433210                    


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                             ......+++.+.+||.+||+.||.+|||+.++++||||
T Consensus       220 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         220 -------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             -------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                   01112357899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-48  Score=338.08  Aligned_cols=257  Identities=26%  Similarity=0.436  Sum_probs=213.5

Q ss_pred             hhhcceee-eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec----
Q 015948            9 KVADRYLK-REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH----   82 (397)
Q Consensus         9 ~~~~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~----   82 (397)
                      .+.++|.+ .++||-|--|.|-.|.++.|++.||+|++....       .+++|+++.-.. .|||||.++|.|++    
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~  130 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-------KARREVELHWMASGHPHIVSIIDVYENSYQG  130 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-------HHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence            37888988 467899999999999999999999999986432       456899886655 69999999999854    


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeecc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGL  157 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~  157 (397)
                      ...+.+|||+++ |+|++.+..++ ..|+|.++..|++||..|+.|||+.+|.||||||+|+|....   ..+||+|||+
T Consensus       131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF  210 (400)
T KOG0604|consen  131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF  210 (400)
T ss_pred             ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence            457889999999 57888888764 459999999999999999999999999999999999999754   4699999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI----DQLGKIFAAFGTATP  233 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~~~~  233 (397)
                      |+.... .....+.+.|++|.|||++.. ..|+.+.|+||+||++|-|++|.|||..+...    ....+|..+--.++ 
T Consensus       211 AK~t~~-~~~L~TPc~TPyYvaPevlg~-eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP-  287 (400)
T KOG0604|consen  211 AKETQE-PGDLMTPCFTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP-  287 (400)
T ss_pred             ccccCC-CccccCCcccccccCHHHhCc-hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC-
Confidence            997654 345667889999999999955 56999999999999999999999999876543    22333333211111 


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                             ...|..+|.+++|+|+.+|..+|.+|+|+++++.|||..+..
T Consensus       288 -----------------------~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  288 -----------------------EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             -----------------------ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence                                   234456799999999999999999999999999999998754

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-48  Score=350.04  Aligned_cols=311  Identities=26%  Similarity=0.350  Sum_probs=256.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..+|-.+.+||+|+||.|-+|..+.+.+.||||++++...- ....+--+.|-.+|.... -|++++++.+|+.-+.+|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            45688999999999999999999999999999999876522 222222346777777764 4899999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||+. |+|...+++-+ .+-|..+..|+.+|+-||-+||++||++||||.+|||++.+|++||+|||+++.--.....
T Consensus       428 VMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T  506 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT  506 (683)
T ss_pred             EEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence            999998 57888877654 5899999999999999999999999999999999999999999999999999876666677


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ..+.+||+.|+|||++.- .+|+.++|+||+||+||||+.|++||++.++.+....|+..-.                  
T Consensus       507 TkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv------------------  567 (683)
T KOG0696|consen  507 TKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV------------------  567 (683)
T ss_pred             eeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC------------------
Confidence            788999999999999975 7899999999999999999999999999999999988876421                  


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCCCCCCCCCCCcccccc----CCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPTEPNKLPRPATKRA----SKAS  318 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~~~~~~~~~~~~~~~~----~~~~  318 (397)
                                .++.++|.++.++...+|.+.|.+|..+     .+|-+||||....|.........|+.++.    ...+
T Consensus       568 ----------syPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~e  637 (683)
T KOG0696|consen  568 ----------SYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDAE  637 (683)
T ss_pred             ----------cCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccccCCchh
Confidence                      2334679999999999999999999864     67999999999888654443333333332    2333


Q ss_pred             CCC--CCCCCcccCCcccccCCCCCCCCCCCCCCc
Q 015948          319 DFN--PQEGPTVLSPPRKTRRVMPDREGFEGNANR  351 (397)
Q Consensus       319 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (397)
                      ++.  -...++.+.|+.+--...-+++.|.|.+.-
T Consensus       638 NFD~~Ft~~~~~lTPpD~~v~~nldq~eF~gFsfv  672 (683)
T KOG0696|consen  638 NFDKFFTREPTDLTPPDKLVMMNLDQSEFEGFSFV  672 (683)
T ss_pred             hhhHHHhcCCCCCCCchHHHHhcCchhhcCceeee
Confidence            333  246778888888877777788888887654

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.3e-46  Score=371.01  Aligned_cols=256  Identities=22%  Similarity=0.344  Sum_probs=214.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC-CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ...|.+.+.||+|+||.||+|.+..+ +..||+|.+....  ......+.+|+.+|+.++|||||+++++|..++++|+|
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv  143 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI  143 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence            44599999999999999999998887 7889999764332  22233566799999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           90 FEFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |||+. |+|...+..   ....+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+....
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence            99998 588776643   24468999999999999999999999999999999999999999999999999998764432


Q ss_pred             C--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 R--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .  .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+......             
T Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~-------------  289 (478)
T PTZ00267        224 SLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD-------------  289 (478)
T ss_pred             ccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------
Confidence            1  2345568999999999876 56899999999999999999999999887776666655432110             


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                    .....++.++.+||.+||..||++||++++++.|+|+..
T Consensus       290 --------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        290 --------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             --------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence                          111245889999999999999999999999999999853

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=3.8e-46  Score=347.04  Aligned_cols=263  Identities=27%  Similarity=0.395  Sum_probs=215.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..+.|++.+.||.|+||.||+|++..+++.|++|.+....  ......+.+|+.+++.++|+||+++++.+..++.+|+|
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM   87 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence            3678999999999999999999999999999999986432  22234567899999999999999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||++| +|...+.+....+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus        88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~  167 (292)
T cd06644          88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR  167 (292)
T ss_pred             EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccccc
Confidence            999995 5666666555669999999999999999999999999999999999999999999999999987654433333


Q ss_pred             cccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ....++..|+|||++.+    ...++.++|+|||||++|+|++|.+||...+......++...   ..+ .         
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~-~---------  234 (292)
T cd06644         168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPP-T---------  234 (292)
T ss_pred             ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CCc-c---------
Confidence            44567788999999853    234788999999999999999999999876654444333211   000 0         


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                                  ......++.++.+||.+||..||++||+++++++||||.....
T Consensus       235 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         235 ------------LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             ------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence                        0112245789999999999999999999999999999976543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=3.9e-46  Score=345.83  Aligned_cols=262  Identities=26%  Similarity=0.390  Sum_probs=216.3

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .|++.+.||+|+||+||+|.+..+++.||+|.+........ ....+.+|+.+|+.++|+||+.++++|..++..|+|||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            47889999999999999999999999999999876543222 22346689999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |+.| +|...+... ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...... ....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~  159 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-ESIR  159 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-Cccc
Confidence            9984 677666543 345999999999999999999999999999999999999999999999999999765432 2234


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...|+..|+|||++.+ ..++.++|+|||||++|+|++|..||.+..+......+.........                
T Consensus       160 ~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~----------------  222 (285)
T cd05632         160 GRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE----------------  222 (285)
T ss_pred             CCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc----------------
Confidence            4578899999999976 56899999999999999999999999887665544444332211110                


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP  300 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~  300 (397)
                              .+.+.++.++.+|+.+||+.||++||+     +.+++.|+||....+.
T Consensus       223 --------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05632         223 --------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK  270 (285)
T ss_pred             --------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence                    112345789999999999999999999     8899999999886543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=3.5e-46  Score=355.15  Aligned_cols=285  Identities=35%  Similarity=0.656  Sum_probs=222.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~------   83 (397)
                      +..+|.+.+.||.|+||.||+|.+..+|..||+|++.....  .....+.+|+.+++.++||||+++++.+...      
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE   80 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence            46899999999999999999999999999999999865433  2334577899999999999999999876543      


Q ss_pred             --------CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEee
Q 015948           84 --------GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLAD  154 (397)
Q Consensus        84 --------~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~D  154 (397)
                              ..+|+||||++++|...+...  .+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|
T Consensus        81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d  158 (342)
T cd07854          81 DVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD  158 (342)
T ss_pred             ccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence                    368999999999888877643  4899999999999999999999999999999999999974 56789999


Q ss_pred             eccceeeCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          155 FGLARIFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       155 FG~a~~~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      ||+++.......   ......++..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+....+.......
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~  238 (342)
T cd07854         159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV  238 (342)
T ss_pred             cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            999987543221   11234567889999998765678899999999999999999999999888777766666543322


Q ss_pred             CCCCCCCCCC-Cccccc-cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          232 TPSQWPDLAY-LPDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       232 ~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      .+..+..... ++.... .......+.....+.++.++++||.+||+.||.+|||+.+++.||||+...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~  307 (342)
T cd07854         239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS  307 (342)
T ss_pred             ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence            2211111100 000000 011122233444567899999999999999999999999999999998643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=9.7e-46  Score=337.15  Aligned_cols=254  Identities=26%  Similarity=0.406  Sum_probs=216.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|.+.+.||+|++|.||+|.+..+++.|++|.+............+.+|+.+++.++||||+++++++..++..|+||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            48899999999999999999999999999999876544444455677899999999999999999999999999999999


Q ss_pred             cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           93 ME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        93 ~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      +. ++|.+++... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++............
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~  160 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT  160 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence            97 5888887764 456899999999999999999999999999999999999999999999999999877655444445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+.....                     
T Consensus       161 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------------  218 (256)
T cd08529         161 IVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF---------------------  218 (256)
T ss_pred             cccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---------------------
Confidence            567888999999976 5588999999999999999999999987775554444432110                     


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                            ..+...++.++.++|.+||+.+|++||++.++++|||+
T Consensus       219 ------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         219 ------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             ------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence                  01111347899999999999999999999999999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.3e-46  Score=339.46  Aligned_cols=255  Identities=25%  Similarity=0.452  Sum_probs=211.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC---ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG---VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      +.|.+.+.||+|++|.||+|.+..+++.||+|.+........   ....+.+|+.++++++||||+++++++..+..+|+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            579999999999999999999999999999999876533221   22356789999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |+||++| +|.+.+... ..+++..++.++.||+.||.|||++||+||||+|+||+++.++.++|+|||+++........
T Consensus        82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~  160 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS  160 (263)
T ss_pred             EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence            9999985 677777654 35899999999999999999999999999999999999999999999999999865432211


Q ss_pred             c---cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          168 F---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       168 ~---~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      .   ....++..|+|||++.+ ..++.++|||||||++|+|++|++||...+.......+.....               
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---------------  224 (263)
T cd06625         161 GTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT---------------  224 (263)
T ss_pred             cccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC---------------
Confidence            1   23456788999999987 4589999999999999999999999987665544433322100               


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                 ...+...++..+.+||.+||..+|.+|||+.++++|+||
T Consensus       225 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         225 -----------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             -----------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence                       011223458899999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1.9e-46  Score=356.26  Aligned_cols=291  Identities=40%  Similarity=0.689  Sum_probs=231.5

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec--C
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH--K   83 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~--~   83 (397)
                      +..+.++|.+.+.||+|+||.||+|.+..+|..+|+|++............+.+|+.+++++ +|+||++++++|..  .
T Consensus         2 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~   81 (337)
T cd07852           2 DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND   81 (337)
T ss_pred             CchhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence            45678999999999999999999999999999999999865433333334567899999999 99999999999864  3


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ..+|+||||++++|...+...  .+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||++.....
T Consensus        82 ~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~  159 (337)
T cd07852          82 KDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE  159 (337)
T ss_pred             ceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence            468999999999998888765  588999999999999999999999999999999999999999999999999987643


Q ss_pred             CC-----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          164 PD-----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       164 ~~-----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      ..     .......++.+|+|||++.+...++.++|+|||||++|+|++|++||.+....+...++....+......+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T cd07852         160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES  239 (337)
T ss_pred             ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            32     1233456788999999987666788999999999999999999999999888888888777665433221111


Q ss_pred             CCCC--cccc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          239 LAYL--PDYV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       239 ~~~~--~~~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      +...  .... ..............+.++.++.+||.+||+.||++|||+.++++||||.....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~  303 (337)
T cd07852         240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN  303 (337)
T ss_pred             HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence            0000  0000 00111112233445567899999999999999999999999999999987533

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-46  Score=345.40  Aligned_cols=260  Identities=28%  Similarity=0.414  Sum_probs=216.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||.|+||+||+|.+..++..+|+|.+....  ......+.+|+.+++.++|+||+++++.+..+..+|+||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI   81 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence            468999999999999999999998899999999986432  222345678999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++| +|..++.+....+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus        82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  161 (280)
T cd06611          82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD  161 (280)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence            99985 77777776666799999999999999999999999999999999999999999999999999876654444444


Q ss_pred             ccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          170 HQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ...++..|+|||++..    ...++.++|+|||||++|+|++|.+||.+.+....+..+....   .    +.       
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~----~~-------  227 (280)
T cd06611         162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSE---P----PT-------  227 (280)
T ss_pred             eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCC---C----CC-------
Confidence            5667888999999852    2346789999999999999999999998776655544442210   0    00       


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 ......++.++.+||.+||+.||.+||+++++++|+||.+.
T Consensus       228 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         228 -----------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             -----------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence                       01112357899999999999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=6.3e-46  Score=351.25  Aligned_cols=281  Identities=20%  Similarity=0.214  Sum_probs=208.4

Q ss_pred             eeeeeeec--CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           16 KREVLGEG--TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        16 i~~~LG~G--~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      ++++||+|  +|++||++.++.+|+.||+|.+............+.+|+.+++.++||||++++++|..++..|+||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            57889999  7899999999999999999998765444444445678999999999999999999999999999999999


Q ss_pred             c-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-----
Q 015948           94 E-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-----  166 (397)
Q Consensus        94 ~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-----  166 (397)
                      + |+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||.+........     
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV  161 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence            8 5777777653 33489999999999999999999999999999999999999999999999987544321111     


Q ss_pred             --cccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC-------CCCC
Q 015948          167 --RFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT-------PSQW  236 (397)
Q Consensus       167 --~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------~~~~  236 (397)
                        ......++..|+|||++.+. ..++.++|||||||++|||++|..||....................       +...
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (327)
T cd08227         162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEEL  241 (327)
T ss_pred             ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhc
Confidence              11223456679999998753 4589999999999999999999999987655443333222100000       0000


Q ss_pred             -------CCCCCCcccccc----ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          237 -------PDLAYLPDYVEY----QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       237 -------~~~~~~~~~~~~----~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                             ............    ..............+++++.+||.+||+.||++|||++|+++||||..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         242 TMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             ccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence                   000000000000    000001111223346789999999999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.2e-46  Score=355.54  Aligned_cols=287  Identities=37%  Similarity=0.622  Sum_probs=230.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe---
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN---   85 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~---   85 (397)
                      .+.++|.+.+.||+|+||.||+|++..++..||+|++............+.+|+.+++.+.|+||+++++++...+.   
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            46889999999999999999999999999999999986543333333456789999999999999999998866554   


Q ss_pred             ---EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           86 ---LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        86 ---~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                         +|+|+||++++|.+++...  .+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus        92 ~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851          92 FQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             cccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence               9999999999998888753  48999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ..   .....++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+....+..+....+...+..+.....-
T Consensus       170 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  246 (343)
T cd07851         170 DE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSE  246 (343)
T ss_pred             cc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccch
Confidence            32   334567888999999876556889999999999999999999999998888888888776654433222111100


Q ss_pred             --ccccc-cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          243 --PDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       243 --~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                        ..+.. ......+.+...+..++.++.+||.+||..||++|||+.++++||||.....+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         247 SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence              00000 01111122334455679999999999999999999999999999999865443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.3e-46  Score=353.34  Aligned_cols=283  Identities=37%  Similarity=0.619  Sum_probs=226.1

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~------   83 (397)
                      +.++|.+.+.||+|+||.||+|++..+|+.||+|++............+.+|+.+++.++|+||++++++|...      
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~   92 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF   92 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence            46899999999999999999999999999999999876544344445677899999999999999999998654      


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ..+|+|+||+.+++.....   ..+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||+++....
T Consensus        93 ~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~  169 (342)
T cd07879          93 QDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA  169 (342)
T ss_pred             ceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence            3569999999987766542   3489999999999999999999999999999999999999999999999999876432


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                         ......++..|+|||++.+...++.++|||||||++|||++|+.||.+.+....+..+...++...+..+.......
T Consensus       170 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (342)
T cd07879         170 ---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA  246 (342)
T ss_pred             ---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence               22345677889999998765568899999999999999999999999988778888887766644433221111000


Q ss_pred             ccc---ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          244 DYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       244 ~~~---~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ...   .........+...++.++.++.+||.+||+.||.+||++++++.||||....
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            000   0001111223334567789999999999999999999999999999998753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=5.4e-46  Score=353.28  Aligned_cols=252  Identities=25%  Similarity=0.388  Sum_probs=198.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC-
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK-   83 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~-   83 (397)
                      .++|++.+.||+|+||.||+|.+.     .++..||+|++..... ......+.+|+.+|+.+ +||||+++++++... 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            478999999999999999999752     3457899999864322 22234578899999999 899999999988654 


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcC---------------------------------------------------------
Q 015948           84 GNLHLVFEFME-TDLETVIRNTN---------------------------------------------------------  105 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~---------------------------------------------------------  105 (397)
                      +.+|+||||++ |+|.+++....                                                         
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            46899999998 68888776431                                                         


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cccccccCceeeC
Q 015948          106 ----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRA  179 (397)
Q Consensus       106 ----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~a  179 (397)
                          ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......  ......++..|+|
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA  244 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence                2377888999999999999999999999999999999999999999999999986532221  1223344567999


Q ss_pred             hhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccc
Q 015948          180 PELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRS  258 (397)
Q Consensus       180 PE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (397)
                      ||++.+ ..++.++|||||||++|||++ |.+||.+....+.+...+.....                          ..
T Consensus       245 PE~~~~-~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--------------------------~~  297 (338)
T cd05102         245 PESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR--------------------------MR  297 (338)
T ss_pred             cHHhhc-CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC--------------------------CC
Confidence            999976 568999999999999999997 99999876544333332221000                          01


Q ss_pred             cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          259 LFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       259 ~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ....+++++.+||.+||..||.+|||+.++++
T Consensus       298 ~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         298 APENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            11245789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.6e-45  Score=335.89  Aligned_cols=254  Identities=25%  Similarity=0.482  Sum_probs=215.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|++.+.||+|+||.||++++..+|+.||+|.+............+.+|+.+++.++|+||+++++++...++.|+||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            69999999999999999999999999999999876543333344678899999999999999999999999999999999


Q ss_pred             cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           93 ME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        93 ~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      +. ++|.+.+... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++............
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART  160 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence            98 5888887664 335889999999999999999999999999999999999999999999999999876554433344


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+.....                     
T Consensus       161 ~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~---------------------  218 (256)
T cd08218         161 CIGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY---------------------  218 (256)
T ss_pred             ccCCccccCHHHhCC-CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC---------------------
Confidence            567788999999876 5578899999999999999999999987766665555433210                     


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                            .......+.++.++|.+||+.+|.+||++.++++||||
T Consensus       219 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         219 ------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             ------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence                  01112347899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.1e-45  Score=342.06  Aligned_cols=259  Identities=27%  Similarity=0.396  Sum_probs=213.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      +.|++.+.||.|+||.||+|.+..++..+++|.+.....  .....+.+|+.+++.++|+||++++++|..++..|+|+|
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e   82 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   82 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH--HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence            457899999999999999999999999999999854321  223456789999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |++| +|...+.+....+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||++............
T Consensus        83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  162 (282)
T cd06643          83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS  162 (282)
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence            9985 566666655567999999999999999999999999999999999999999999999999999766443333445


Q ss_pred             cccCceeeChhccc----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          171 QVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       171 ~~~t~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ..++..|+|||++.    ....++.++|+|||||++|+|++|.+||...+..+....+.......               
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------------  227 (282)
T cd06643         163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT---------------  227 (282)
T ss_pred             ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC---------------
Confidence            56788899999984    22457789999999999999999999998776655555543321100               


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                ......++.++.+||.+||..||.+||+++++++||||...
T Consensus       228 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         228 ----------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             ----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence                      00112347899999999999999999999999999999753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-47  Score=355.57  Aligned_cols=258  Identities=28%  Similarity=0.433  Sum_probs=221.7

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      +.|.=++.||.|+||.||.|++..+...||||++..+. +....+..+++|+..|+++.|||+|.+-++|-.+...|+||
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM  105 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM  105 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence            45666889999999999999999999999999998765 44556677899999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |||-|+-.+++.-...++.+.++..|+.+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|......    ..
T Consensus       106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA----ns  181 (948)
T KOG0577|consen  106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA----NS  181 (948)
T ss_pred             HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch----hc
Confidence            99999777777666667999999999999999999999999999999999999999999999999999876443    46


Q ss_pred             cccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          171 QVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ++|||+|||||+++.  ..+|+-++||||||+++.||.-.+||+...+.-..+..|...-.....               
T Consensus       182 FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq---------------  246 (948)
T KOG0577|consen  182 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ---------------  246 (948)
T ss_pred             ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC---------------
Confidence            799999999999853  457999999999999999999999998777766666666543111100               


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                                 -+..|+.++.||..||++-|.+|||.+++|.|+|......
T Consensus       247 -----------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp  286 (948)
T KOG0577|consen  247 -----------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP  286 (948)
T ss_pred             -----------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence                       1223889999999999999999999999999999865443

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.3e-45  Score=338.87  Aligned_cols=257  Identities=27%  Similarity=0.391  Sum_probs=209.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||.||+|++..+++.||+|+++....  .....+.+|+.+++.++||||+++++.+...+.+|+||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~   85 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM   85 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence            5689999999999999999999999999999999875432  12234668999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||+++ +|.+++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus        86 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~  164 (267)
T cd06645          86 EFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK  164 (267)
T ss_pred             eccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence            99985 777776554 4699999999999999999999999999999999999999999999999999987654443444


Q ss_pred             ccccCceeeChhccc--CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          170 HQVFARWYRAPELLF--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~--~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ...++..|+|||++.  ....++.++|+|||||++|+|++|.+||........+..+...  ...+..+           
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~-----------  231 (267)
T cd06645         165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS--NFQPPKL-----------  231 (267)
T ss_pred             cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc--CCCCCcc-----------
Confidence            567888999999974  2245788999999999999999999988765543333222111  0000000           


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                                .....++..+.+||.+||..||++||+++++++|||
T Consensus       232 ----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         232 ----------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             ----------cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence                      001134788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-45  Score=351.31  Aligned_cols=285  Identities=39%  Similarity=0.632  Sum_probs=224.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----   84 (397)
                      +.++|.+.+.||+|+||+||+|.+..++..||||++............+.+|+.+|+.++|+||++++++|....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            678999999999999999999999999999999998654333333445778999999999999999999987654     


Q ss_pred             -eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 -NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 -~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                       .+|+||||++++|...+...  .+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.....
T Consensus        93 ~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~  170 (343)
T cd07880          93 HDFYLVMPFMGTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS  170 (343)
T ss_pred             ceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence             46899999988888777643  489999999999999999999999999999999999999999999999999986533


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC-
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL-  242 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-  242 (397)
                      .   .....+++.|+|||++.+...++.++|+|||||++|+|++|.+||.+.+....+..++...+......+...... 
T Consensus       171 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07880         171 E---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED  247 (343)
T ss_pred             C---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence            2   233456788999999876556889999999999999999999999988877777776664433221110000000 


Q ss_pred             -ccccc-cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          243 -PDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       243 -~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                       ..+.. ........+....+.+++.+.++|.+||..||++|||+.+++.||||.....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence             00000 0001111223344667899999999999999999999999999999987543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-45  Score=339.33  Aligned_cols=278  Identities=44%  Similarity=0.803  Sum_probs=226.1

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEeeeecCCe-----
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFPHKGN-----   85 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~~~~~-----   85 (397)
                      |.+.+.||+|+||.||+|+++.+++.||+|.+............+.+|+.+++++   +|+||+++++++.....     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            7889999999999999999998899999999976544444444566788887766   59999999999987776     


Q ss_pred             EEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|++|||+.++|.+++.... ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus        81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~  160 (287)
T cd07838          81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE  160 (287)
T ss_pred             eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence            99999999999988877643 35899999999999999999999999999999999999999999999999999876443


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      . ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+..+.+.++....+......|+.......
T Consensus       161 ~-~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07838         161 M-ALTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR  238 (287)
T ss_pred             c-ccccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence            2 2233456778999999976 5588999999999999999999999999999999998888766555444443322111


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      . .+............+.+++.+.+||.+||+.||.+||++.+++.||||
T Consensus       239 ~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         239 S-SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             h-hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            0 011111122234445668899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=2.8e-45  Score=341.98  Aligned_cols=257  Identities=29%  Similarity=0.514  Sum_probs=213.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ...+|++.+.||+|+||.||+|++..++..||+|.+......  ....+.+|+.+++.+.|+||+++++.|..+.+.|+|
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv   95 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence            467999999999999999999999999999999998754432  234577899999999999999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||+.| +|..++...  .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus        96 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  173 (296)
T cd06654          96 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  173 (296)
T ss_pred             ecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccccc
Confidence            999984 777776543  48899999999999999999999999999999999999999999999999988664443334


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ....+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+....+..+... +.  + .             
T Consensus       174 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~--~-~-------------  235 (296)
T cd06654         174 STMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GT--P-E-------------  235 (296)
T ss_pred             CcccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CC--C-C-------------
Confidence            45678888999999876 55789999999999999999999999877654433322110 00  0 0             


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                              ......++..+.+||.+||..||++|||+.++++|+||..
T Consensus       236 --------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         236 --------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             --------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence                    0112345788999999999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-46  Score=350.66  Aligned_cols=247  Identities=25%  Similarity=0.413  Sum_probs=211.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      +.+.+.+.||+|.||.||+|....+ ..||+|.++.....   ...+.+|+++|++|+|++||++++++..++.+|||||
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE  281 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE  281 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence            4466788999999999999977532 48999998765333   2357799999999999999999999999889999999


Q ss_pred             ccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||. |+|+++++. .+..+...+...++.||++|++||+++++|||||-..||||++++.+||+|||+|+...+......
T Consensus       282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~  361 (468)
T KOG0197|consen  282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS  361 (468)
T ss_pred             ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence            999 899999997 456699999999999999999999999999999999999999999999999999996554433222


Q ss_pred             ccc-cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          170 HQV-FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       170 ~~~-~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ... ...-|.|||.+.. ..++.++|||||||+||||+| |+.|+.+.++.+.+..+-++...+.|..            
T Consensus       362 ~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~------------  428 (468)
T KOG0197|consen  362 EGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEG------------  428 (468)
T ss_pred             CCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCC------------
Confidence            111 1234999999976 459999999999999999997 9999999999999999988766655543            


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                     +++++-+++..|+..+|++|||.+.+..
T Consensus       429 ---------------CP~~vY~lM~~CW~~~P~~RPtF~~L~~  456 (468)
T KOG0197|consen  429 ---------------CPDEVYELMKSCWHEDPEDRPTFETLRE  456 (468)
T ss_pred             ---------------CCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence                           4789999999999999999999987653

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2e-45  Score=340.01  Aligned_cols=256  Identities=27%  Similarity=0.389  Sum_probs=206.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||.||+|++..+++.||+|++..... ......+.+|++++++++||||++++++|...+..++|||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE   79 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence            478999999999999999999999999999999875432 2223457789999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      |++|+.+....    .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......  .....
T Consensus        80 ~~~~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~  153 (279)
T cd06619          80 FMDGGSLDVYR----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTY  153 (279)
T ss_pred             cCCCCChHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccCC
Confidence            99975544332    3789999999999999999999999999999999999999999999999999876433  23345


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID---QLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      +++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......   .............+..             
T Consensus       154 ~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  219 (279)
T cd06619         154 VGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV-------------  219 (279)
T ss_pred             CCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC-------------
Confidence            78888999999976 568999999999999999999999986532111   0111111111110000             


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                               ......++++++||.+||+.||++||+++++++||||...
T Consensus       220 ---------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         220 ---------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             ---------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence                     0112357899999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=5.8e-45  Score=332.28  Aligned_cols=254  Identities=27%  Similarity=0.462  Sum_probs=218.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|++.+.||.|+||.||.+++..++..+++|.+............+.+|+.++++++|+||+++++++.+.+.++++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            69999999999999999999999999999999876654444455678999999999999999999999999999999999


Q ss_pred             cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           93 ME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        93 ~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ++ |+|.+.+.+. ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++............
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET  160 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence            98 5888888765 456899999999999999999999999999999999999999999999999999877554434445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+...  ...                  
T Consensus       161 ~~~~~~y~ape~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~------------------  219 (256)
T cd08221         161 VVGTPYYMSPELCQG-VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT------------------  219 (256)
T ss_pred             cCCCccccCHhhcCC-CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC------------------
Confidence            668889999999876 45788999999999999999999999887766666555431  100                  


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                             .....++.++.++|.+||..+|.+||++.++++|+|+
T Consensus       220 -------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         220 -------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             -------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence                   1113457899999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-45  Score=344.83  Aligned_cols=265  Identities=26%  Similarity=0.395  Sum_probs=219.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||+||+|.+..+++.||+|.+....... .....+.+|+++++.++|+||+++++.+.+....|+||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            47999999999999999999999999999999997654332 23345778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--
Q 015948           91 EFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--  166 (397)
Q Consensus        91 e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--  166 (397)
                      ||+.| +|.+++... +..+++..++.++.||+.||.|||+.|++|+||||+||+|+.++.++|+|||++........  
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            99985 788877654 35689999999999999999999999999999999999999999999999999875432211  


Q ss_pred             ---------------------------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 015948          167 ---------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID  219 (397)
Q Consensus       167 ---------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  219 (397)
                                                 .....+|+..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~  239 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE  239 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence                                       1123467888999999976 557899999999999999999999998887766


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC----HHHHhcCCCCC
Q 015948          220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT----AQQALEHRYFS  295 (397)
Q Consensus       220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~  295 (397)
                      .+..+...-     ..++                     ....++.++.++|.+||..||++|||    ++|++.||||+
T Consensus       240 ~~~~~~~~~-----~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~  293 (316)
T cd05574         240 TFSNILKKE-----VTFP---------------------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR  293 (316)
T ss_pred             HHHHHhcCC-----ccCC---------------------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhh
Confidence            655543210     0010                     01125899999999999999999999    99999999999


Q ss_pred             CCCCCCCC
Q 015948          296 SAPLPTEP  303 (397)
Q Consensus       296 ~~~~~~~~  303 (397)
                      +..++...
T Consensus       294 ~~~~~~~~  301 (316)
T cd05574         294 GVNWALIR  301 (316)
T ss_pred             cCChhhcc
Confidence            87765543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.1e-45  Score=342.94  Aligned_cols=260  Identities=30%  Similarity=0.492  Sum_probs=214.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|.+......  ....+.+|+.+++.++|+||++++++|..++.+|+
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   93 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWV   93 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence            3468999999999999999999999999999999998754332  23456789999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||++| +|..++.+.  .+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++.........
T Consensus        94 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~  171 (297)
T cd06656          94 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  171 (297)
T ss_pred             eecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence            9999985 777776543  3889999999999999999999999999999999999999999999999999876544444


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      .....+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+....+..+... +..                
T Consensus       172 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-~~~----------------  233 (297)
T cd06656         172 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTP----------------  233 (297)
T ss_pred             cCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-CCC----------------
Confidence            445667888999999976 56889999999999999999999999776543322211100 000                


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                              .......++..+++||.+||..||++||+++++++||||....
T Consensus       234 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  276 (297)
T cd06656         234 --------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK  276 (297)
T ss_pred             --------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence                    0011234578899999999999999999999999999998644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2e-45  Score=350.22  Aligned_cols=285  Identities=36%  Similarity=0.575  Sum_probs=225.8

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~------   83 (397)
                      +.++|.+.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.++++++|+||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   94 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence            56899999999999999999999999999999999876443333344577899999999999999999988543      


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ...|+++++++++|...+...  .+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus        95 ~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~  172 (345)
T cd07877          95 NDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  172 (345)
T ss_pred             ccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence            457899999988888777643  489999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                         ......++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+..+....+...+..+.......
T Consensus       173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (345)
T cd07877         173 ---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES  249 (345)
T ss_pred             ---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHh
Confidence               22345678889999998765668899999999999999999999999888777777777766554433322221110


Q ss_pred             ccc---ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          244 DYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       244 ~~~---~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ...   .........+.......++++++||.+||+.||.+|+++.++++||||.....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~  308 (345)
T cd07877         250 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  308 (345)
T ss_pred             HHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence            000   00011111122223346889999999999999999999999999999987544

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.2e-45  Score=336.99  Aligned_cols=256  Identities=27%  Similarity=0.369  Sum_probs=208.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH------   82 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~------   82 (397)
                      ..+.|.+.+.||+|+||.||+|.+..+++.||+|.+.....   ....+.+|+.+++.+ +|+||++++++|..      
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            46789999999999999999999999999999999875432   233567899999998 69999999999864      


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           83 KGNLHLVFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      ...+|+||||++ |+|..++... ...+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++..
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~  160 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  160 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence            346899999998 5787777663 34589999999999999999999999999999999999999999999999999987


Q ss_pred             eCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ............|+..|+|||++.+    ...++.++|||||||++|||++|..||...........+...    .    
T Consensus       161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~----~----  232 (272)
T cd06637         161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----P----  232 (272)
T ss_pred             cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC----C----
Confidence            6544444455678888999999863    235788999999999999999999999765543333222110    0    


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                        ........++.++.+||.+||..||.+|||+.+++.||||
T Consensus       233 ------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         233 ------------------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             ------------------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence                              0001112357899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=3.1e-45  Score=347.20  Aligned_cols=286  Identities=39%  Similarity=0.619  Sum_probs=227.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCC--CcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec----CCe
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKT--GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH----KGN   85 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~----~~~   85 (397)
                      +|.+.+.||+|+||.||+|++..+  +..||+|.+............+.+|+.+++++ +|+||+++++.+..    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            589999999999999999999888  89999999875433333344577899999999 59999999986432    356


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      +|+++||++++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus        81 ~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~  159 (332)
T cd07857          81 LYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP  159 (332)
T ss_pred             EEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence            8999999999998888654 458999999999999999999999999999999999999999999999999998764322


Q ss_pred             C----cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 R----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~----~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .    .....+++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+..++..++.+....+.....
T Consensus       160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (332)
T cd07857         160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS  239 (332)
T ss_pred             ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence            1    123356788899999987656789999999999999999999999999888888888888877644322211111


Q ss_pred             Cccc---cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          242 LPDY---VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       242 ~~~~---~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ....   ..........+....+.++..+.+||.+||+.||++|||+.+++.|||+.....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~  300 (332)
T cd07857         240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHD  300 (332)
T ss_pred             hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcC
Confidence            0000   001111222334455667899999999999999999999999999999976543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=2.4e-45  Score=341.34  Aligned_cols=255  Identities=26%  Similarity=0.408  Sum_probs=216.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...... ......+.+|++++++++||||+++++.+.++..+|+||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4799999999999999999999999999999998754322 223445778999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||+. |+|.+.+... ..+++..+..++.||+.||.|||++|++|+||+|.||||+.++.+||+|||++......   ..
T Consensus        81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~  156 (290)
T cd05580          81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TY  156 (290)
T ss_pred             ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CC
Confidence            9996 6888887665 45899999999999999999999999999999999999999999999999999876443   33


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+....                     
T Consensus       157 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---------------------  214 (290)
T cd05580         157 TLCGTPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK---------------------  214 (290)
T ss_pred             CCCCCccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------------------
Confidence            4567888999999876 467899999999999999999999998777554444443210                     


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                             ..+...++..++++|.+||..||.+|+     +++++++||||....+
T Consensus       215 -------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  262 (290)
T cd05580         215 -------VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDW  262 (290)
T ss_pred             -------ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCH
Confidence                   011223478999999999999999999     8999999999987654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-45  Score=338.19  Aligned_cols=256  Identities=29%  Similarity=0.430  Sum_probs=215.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|.+.+.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++|+||+++++++.++..+|+|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME   79 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence            579999999999999999999999999999999875432 2223456789999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |+.| +|.+.+...  .+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||+++...........
T Consensus        80 ~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (274)
T cd06609          80 YCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT  157 (274)
T ss_pred             eeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence            9985 777777654  5899999999999999999999999999999999999999999999999999887655444455


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||.+.+ ..++.++|||||||++|+|++|.+||...+.......+....    +...+             
T Consensus       158 ~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~~~~-------------  219 (274)
T cd06609         158 FVGTPFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN----PPSLE-------------  219 (274)
T ss_pred             ccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC----CCCCc-------------
Confidence            677888999999977 448999999999999999999999998766544433332210    00000             


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                               ...++.++.++|.+||..||++|||++++++||||...
T Consensus       220 ---------~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         220 ---------GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             ---------ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence                     01147899999999999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.6e-45  Score=336.82  Aligned_cols=261  Identities=28%  Similarity=0.371  Sum_probs=209.4

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .....++|++.+.||+|+||.||+|++..+++.||+|++.....  .....+.+|+.+++.++||||+++++++..++.+
T Consensus         4 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~   81 (267)
T cd06646           4 RRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKL   81 (267)
T ss_pred             ccCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Confidence            34456789999999999999999999999999999999864422  1223466899999999999999999999999999


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||+++ +|.+.+... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus        82 ~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06646          82 WICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI  160 (267)
T ss_pred             EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence            999999995 677766543 458999999999999999999999999999999999999999999999999998765443


Q ss_pred             CcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 RRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .......++..|+|||.+.+  ...++.++|+|||||++|||++|.+||......+....+...  ..            
T Consensus       161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~--~~------------  226 (267)
T cd06646         161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--NF------------  226 (267)
T ss_pred             cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC--CC------------
Confidence            33344567888999999843  244778999999999999999999988655433222111100  00            


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                              ..+.. .....++..+.+||.+||..||++|||++++++|+|
T Consensus       227 --------~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         227 --------QPPKL-KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             --------CCCCC-ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence                    00000 111245789999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-46  Score=355.44  Aligned_cols=265  Identities=26%  Similarity=0.443  Sum_probs=220.3

Q ss_pred             Chhhhcceeeee-----eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee
Q 015948            7 SKKVADRYLKRE-----VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP   81 (397)
Q Consensus         7 ~~~~~~~y~i~~-----~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~   81 (397)
                      .+++.-.|+..+     +||+|.||+||-|+|..+....|||.+....  ....+-+..||.+.++|+|.|||++++.+.
T Consensus       565 ne~iefeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~s  642 (1226)
T KOG4279|consen  565 NEKIEFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVS  642 (1226)
T ss_pred             ccceEEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccC
Confidence            344544555433     6999999999999999999999999986432  233445678999999999999999999999


Q ss_pred             cCCeEEEEEEccc-cCHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeecc
Q 015948           82 HKGNLHLVFEFME-TDLETVIRNTNIFL--SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGL  157 (397)
Q Consensus        82 ~~~~~~lv~e~~~-g~L~~~~~~~~~~l--~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~  157 (397)
                      .++++-|.||-++ |+|..+++..-+++  .|..+-.|.+||++||.|||++.|||||||-+||||+. .|.+||+|||-
T Consensus       643 enGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGT  722 (1226)
T KOG4279|consen  643 ENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGT  722 (1226)
T ss_pred             CCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEeccccc
Confidence            9999999999998 57888888887888  88999999999999999999999999999999999985 58999999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhccc-CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLF-GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~-~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ++.+..-.....+..||..|||||++. |...|+.++|||||||++.||.||+|||........  .|++. |       
T Consensus       723 sKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--AMFkV-G-------  792 (1226)
T KOG4279|consen  723 SKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--AMFKV-G-------  792 (1226)
T ss_pred             chhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--hhhhh-c-------
Confidence            998876666667788999999999994 456799999999999999999999999976543321  22221 1       


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                     ....-..++..+|.+++.||.+|+..||.+||++.++|..||++..+
T Consensus       793 ---------------myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~  839 (1226)
T KOG4279|consen  793 ---------------MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN  839 (1226)
T ss_pred             ---------------ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence                           00111233446689999999999999999999999999999998763

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3e-46  Score=349.30  Aligned_cols=261  Identities=27%  Similarity=0.415  Sum_probs=209.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ...|+++++||+||.+.||++.... ...||+|.+............+.+|+.+|.+|+ |.+||+|+||-..++++|||
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            5679999999999999999997653 466777776655555555667889999999995 79999999999999999999


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--Cc
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RR  167 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--~~  167 (397)
                      |||=+.||...+.+....++.-.++.|..|++.|+.++|+.||||.||||.|+|+ -.|.+||+|||+|..+....  -.
T Consensus       439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~  517 (677)
T KOG0596|consen  439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIV  517 (677)
T ss_pred             eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCcccccee
Confidence            9999999999999887766666999999999999999999999999999999999 46889999999998875433  23


Q ss_pred             ccccccCceeeChhcccCcc----------CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          168 FTHQVFARWYRAPELLFGAK----------QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~----------~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      ...++||..||+||.+....          ..++++||||||||||+|+.|++||..-.+  .+.++....         
T Consensus       518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl~aI~---------  586 (677)
T KOG0596|consen  518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKLHAIT---------  586 (677)
T ss_pred             eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHHHhhc---------
Confidence            45789999999999984311          246899999999999999999999974322  222222211         


Q ss_pred             CCCCCccccccccccCCCccccCCCCC--HHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSAS--DDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                                     .|.....||.++  .++.++++.||.+||++||++.++|+|||++..+.
T Consensus       587 ---------------~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i  635 (677)
T KOG0596|consen  587 ---------------DPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPI  635 (677)
T ss_pred             ---------------CCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccc
Confidence                           111111222222  34999999999999999999999999999875443

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=6.5e-45  Score=339.48  Aligned_cols=258  Identities=32%  Similarity=0.519  Sum_probs=215.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ..+|++.+.||.|+||+||+|.+..+|+.||+|.+.....  .....+.+|+.+++.++|+||+++++.+.....+|+|+
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence            4679999999999999999999999999999999875432  23446778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||+.| +|...+...  .+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++...........
T Consensus        96 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  173 (296)
T cd06655          96 EYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS  173 (296)
T ss_pred             EecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCC
Confidence            99985 666655543  489999999999999999999999999999999999999999999999999887654443344


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+.......+... ....                 
T Consensus       174 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~-----------------  234 (296)
T cd06655         174 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE-----------------  234 (296)
T ss_pred             CcCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcc-----------------
Confidence            5567888999999876 55889999999999999999999999887765554443221 0000                 


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                             ......+++.+.+||.+||..||.+||++.+++.||||....
T Consensus       235 -------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         235 -------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             -------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence                   011124578999999999999999999999999999997643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-45  Score=339.36  Aligned_cols=279  Identities=43%  Similarity=0.719  Sum_probs=231.5

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEEEEc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      |.+.+.||+|+||+||+|....+++.|+||.+...... .......+|+..+++++ |+||+++++++..++..|+||||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   79 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY   79 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence            78899999999999999999989999999998654332 12223457999999999 99999999999999999999999


Q ss_pred             cccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           93 METDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        93 ~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ++|+|...+.... ..+++..+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++....... .....
T Consensus        80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~  158 (283)
T cd07830          80 MEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-PYTDY  158 (283)
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC-CcCCC
Confidence            9999999887764 468999999999999999999999999999999999999999999999999998764322 23345


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      .++..|+|||++.+...++.++|+|||||++|+|++|+++|...+..+.+..+...++......|++...+.........
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07830         159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP  238 (283)
T ss_pred             CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence            67888999999876566899999999999999999999999999998888888888887776666544333222222111


Q ss_pred             --cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          252 --AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       252 --~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                        .........+..+.++++||.+||+.||++|||+.|++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence              1112233445557899999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=8.1e-45  Score=343.63  Aligned_cols=286  Identities=36%  Similarity=0.606  Sum_probs=226.1

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~l   88 (397)
                      +.++|.+.+.||.|+||.||+|.+..+++.||+|++.+..........+.+|+.+++.++||||++++++|.. ...+|+
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l   87 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF   87 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence            5789999999999999999999999999999999987654434444567789999999999999999999865 568999


Q ss_pred             EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |+||++++|...+...  .+++..+..++.||+.||.|||++||+||||+|.||+++.++.++|+|||++.....   ..
T Consensus        88 v~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~---~~  162 (328)
T cd07856          88 VTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP---QM  162 (328)
T ss_pred             EeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---Cc
Confidence            9999998888777643  478899999999999999999999999999999999999999999999999976432   22


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC---CCCccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL---AYLPDY  245 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~  245 (397)
                      ....++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.........+.+.++......+...   ....-.
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (328)
T cd07856         163 TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFV  242 (328)
T ss_pred             CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHH
Confidence            34466778999999876567899999999999999999999999888776666666665554432211100   000000


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      .........+.....+.++.++.++|.+||+.+|++|||+++++.|+||.....+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~  297 (328)
T cd07856         243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP  297 (328)
T ss_pred             hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence            0000011112233445678999999999999999999999999999999765443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.5e-45  Score=333.33  Aligned_cols=258  Identities=31%  Similarity=0.420  Sum_probs=213.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||.||+|.+..+++.+++|++......  ....+.+|+.+++.++||||+++++++.+.+.+|++|
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~   79 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM   79 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence            46899999999999999999999999999999999754332  3456778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++| +|..++......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus        80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  159 (262)
T cd06613          80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK  159 (262)
T ss_pred             eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence            99995 67766666546799999999999999999999999999999999999999999999999999987654433344


Q ss_pred             ccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          170 HQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ...++..|+|||.+.+.  ..++.++|+|||||++|+|++|.+||.+.+.......+...-  ..+..            
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~--~~~~~------------  225 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSN--FPPPK------------  225 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CCCcc------------
Confidence            56678889999998653  257889999999999999999999998776555444332210  00000            


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                               .......+.++.+||.+||..||.+|||+.+++.|+|
T Consensus       226 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         226 ---------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             ---------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence                     0011234678999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=4.9e-45  Score=334.87  Aligned_cols=253  Identities=25%  Similarity=0.501  Sum_probs=208.6

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-------ccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-------VNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+........       ....+.+|+.+++.++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            58899999999999999999998999999999875433221       12346689999999999999999999999999


Q ss_pred             EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .++||||++| +|..++... ..+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||+++.....
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN  159 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence            9999999985 777777654 45899999999999999999999999999999999999999999999999999876422


Q ss_pred             CC------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          165 DR------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       165 ~~------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      ..      ......++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+.....         
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------  229 (267)
T cd06628         160 SLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---------  229 (267)
T ss_pred             cccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---------
Confidence            11      1122346778999999876 4578899999999999999999999987665544433322100         


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                        ......++..+.++|.+||+.||.+||++.++++||||
T Consensus       230 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         230 ------------------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ------------------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence                              01122457899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=4.2e-45  Score=338.17  Aligned_cols=258  Identities=27%  Similarity=0.405  Sum_probs=207.7

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHH-HHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~-l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||.||+|.+..+|+.||+|.+........ ...+..|+.+ ++.+.||||+++++++..++.+|+||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~   79 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM   79 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence            479999999999999999999999999999999876533222 2345556665 66778999999999999999999999


Q ss_pred             EccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           91 EFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        91 e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      ||++|+|..++..   ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||++....... 
T Consensus        80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-  158 (283)
T cd06617          80 EVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-  158 (283)
T ss_pred             hhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-
Confidence            9999988777654   334689999999999999999999997 99999999999999999999999999998754322 


Q ss_pred             cccccccCceeeChhcccCc---cCCCCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 RFTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ......++..|+|||++.+.   ..++.++|+|||||++|+|++|+.||... ...+.+..+......    ..      
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~------  228 (283)
T cd06617         159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP----QL------  228 (283)
T ss_pred             ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC----CC------
Confidence            22334577889999998542   34788999999999999999999998653 233333333221100    00      


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                      ....+|.++.+||.+||..+|.+||++.++++||||...
T Consensus       229 ----------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         229 ----------------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             ----------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence                            011357899999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=3.4e-45  Score=343.35  Aligned_cols=277  Identities=26%  Similarity=0.418  Sum_probs=211.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+..... ......+.+|++++++++||||++++++|..++.+|+|||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME   79 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence            479999999999999999999999999999999864322 2233457789999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |++| +|..++.+. ..+++..+..++.||+.||.|||+ ++++||||||+|||++.++.+||+|||++......  ...
T Consensus        80 y~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~~  156 (308)
T cd06615          80 HMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MAN  156 (308)
T ss_pred             ccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc--ccc
Confidence            9985 777777654 558999999999999999999997 59999999999999999999999999998765332  223


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC------CC-
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA------YL-  242 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~-  242 (397)
                      ..+++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+... ...++........  +++..      .. 
T Consensus       157 ~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~  232 (308)
T cd06615         157 SFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGE--AKESHRPVSGHPPD  232 (308)
T ss_pred             cCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-HHHhhcCcccccc--ccCCcccccCCCCC
Confidence            4567888999999866 568899999999999999999999997665332 2222221111000  00000      00 


Q ss_pred             -------ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 -------PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 -------~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                             .+...+.....++ ..-...++.++++||.+||..||++|||+.++++||||...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         233 SPRPMAIFELLDYIVNEPPP-KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             ccchhhHHHHHHHHhcCCCc-cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                   0000000000000 00011357899999999999999999999999999999764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.6e-45  Score=333.37  Aligned_cols=253  Identities=30%  Similarity=0.469  Sum_probs=212.9

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|.+.+.||+|+||.||+|++..++..|++|.+.....    ...+.+|+.+++.++|+||+++++.+..+..+|+++|
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            689999999999999999999998899999999865432    4567889999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |++| +|.+.+......+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++............
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT  158 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence            9995 787777766667999999999999999999999999999999999999999999999999999876554433444


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||++.+ ..++.++|||||||++|+|++|++||...+.......+..    .....               
T Consensus       159 ~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~---------------  218 (256)
T cd06612         159 VIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN----KPPPT---------------  218 (256)
T ss_pred             ccCCccccCHHHHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc----CCCCC---------------
Confidence            557778999999876 5688999999999999999999999987655433222111    00000               


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                            ......++.++.++|.+||+.||.+|||+.|+++||||
T Consensus       219 ------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         219 ------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             ------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence                  01112357899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=7.7e-45  Score=333.16  Aligned_cols=260  Identities=27%  Similarity=0.409  Sum_probs=214.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|.+.+.||.|+||+||+|....++..+|+|++....... ....+.+|+.+++.++|+||+++++.+..+...|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   79 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP   79 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence            57999999999999999999998899999999987544333 44567889999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948           92 FMET-DLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-  167 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-  167 (397)
                      |+.| +|...+....  ..+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++..+...... 
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~  159 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT  159 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence            9985 7777776542  45899999999999999999999999999999999999999999999999998776543322 


Q ss_pred             ---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          168 ---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       168 ---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                         .....++..|+|||++.....++.++|+|||||++|+|++|+.||...+....+......   . +..+..      
T Consensus       160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~-~~~~~~------  229 (267)
T cd06610         160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---D-PPSLET------  229 (267)
T ss_pred             ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---C-CCCcCC------
Confidence               233457888999999876557899999999999999999999999877665544443322   0 000000      


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                  ...+..++..+.+|+.+||..||++||+++++++||||
T Consensus       230 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         230 ------------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ------------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence                        00123568899999999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.3e-46  Score=354.40  Aligned_cols=258  Identities=24%  Similarity=0.400  Sum_probs=226.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      -...|.+.+.||+|.|++|.+|++..++..||||.+.+..........+.+|+++|+.|+|||||+++.+.+....+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            35779999999999999999999999999999999988776665556688999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||+. |.+.+++.+.+ .+.+..++.++.|+..|++|||+++|+|||||++||||+.+.++||+|||++..+. .....
T Consensus       134 ~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~-~~~~l  211 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD-YGLML  211 (596)
T ss_pred             EEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec-ccccc
Confidence            99998 57888877654 47779999999999999999999999999999999999999999999999999886 45667


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      .+.+|++.|.|||++.+.++.+..+|+||||++||.|+.|..||++.+-.+.-.+.+..                     
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g---------------------  270 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG---------------------  270 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee---------------------
Confidence            78999999999999999888899999999999999999999999988654433332211                     


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                             ...+.--+|-++.++|+++|..+|.+|++++++++|.|....
T Consensus       271 -------k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  271 -------KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             -------eecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence                   001122348899999999999999999999999999998654

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=1.3e-46  Score=316.70  Aligned_cols=276  Identities=32%  Similarity=0.628  Sum_probs=221.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecC--CeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK--GNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~--~~~~   87 (397)
                      .++|++.+++|+|.++.||.|++..+++.++||+++..+.     ..+.+|++||..|. ||||++++|...+.  ....
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk-----kKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa  111 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK-----KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS  111 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH-----HHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence            7899999999999999999999999999999999875433     35789999999997 99999999998664  4678


Q ss_pred             EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceeeCCCC
Q 015948           88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPD  165 (397)
Q Consensus        88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~~~~~  165 (397)
                      +|+||++. +...+...    ++...++.|+++|+.||+|||++||+|||+||.|++|+.. ..++|+|+|+|..+ .+.
T Consensus       112 LiFE~v~n~Dfk~ly~t----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY-Hp~  186 (338)
T KOG0668|consen  112 LIFEYVNNTDFKQLYPT----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPG  186 (338)
T ss_pred             hHhhhhccccHHHHhhh----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhc-CCC
Confidence            99999995 55555443    8889999999999999999999999999999999999965 56999999999876 455


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCC-CCCCCCCcHHHHHHHHHHhCCCCCCCCCCC--CCC
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDL--AYL  242 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~  242 (397)
                      ......+.+++|-.||.+...+.|+.+-|+|||||+|..|++.+ |+|.|.++.+++.+|.+.+|+.....+-+-  ..+
T Consensus       187 ~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L  266 (338)
T KOG0668|consen  187 KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL  266 (338)
T ss_pred             ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence            66777888999999999998889999999999999999999865 889999999999999998886322111000  000


Q ss_pred             cccccc--ccccCCCccccC-----CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          243 PDYVEY--QYVAAPPLRSLF-----PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       243 ~~~~~~--~~~~~~~~~~~~-----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      +...+-  ......++..+.     .-.++++.|||.++|.+|-.+|+|+.|++.||||..
T Consensus       267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence            000000  000001111111     124799999999999999999999999999999964

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-45  Score=367.17  Aligned_cols=290  Identities=21%  Similarity=0.293  Sum_probs=209.6

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCC-cEEEEEEee--------------cC-CccCCccchHHHHHHHHHhcCC
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIR--------------LG-KQKEGVNFTALREIKLLKELKS   70 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~aiK~i~--------------~~-~~~~~~~~~~~~E~~~l~~l~h   70 (397)
                      ...+.++|++.+.||+|+||+||+|..+... ...++|.+.              +. .........+.+|+.+|++++|
T Consensus       143 ~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H  222 (501)
T PHA03210        143 DDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH  222 (501)
T ss_pred             chhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC
Confidence            3456789999999999999999998765432 222222111              00 0111123346689999999999


Q ss_pred             CCeeEEEeeeecCCeEEEEEEccccCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           71 PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTN----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        71 p~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                      +||+++++++.+.+..|+|+|++.++|+.++....    .......++.++.||+.||+|||++||+||||||+||||+.
T Consensus       223 pnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~  302 (501)
T PHA03210        223 ENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC  302 (501)
T ss_pred             CCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence            99999999999999999999999999988876532    12346678899999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCCC-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC-CCCCC--CcHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPDR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP-FLQGS--SDIDQLG  222 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~-pf~~~--~~~~~~~  222 (397)
                      +|.+||+|||+++.+..... .....+|+..|+|||++.+ ..++.++|||||||++|||++|.. ||.+.  .....+.
T Consensus       303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~  381 (501)
T PHA03210        303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL  381 (501)
T ss_pred             CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence            99999999999987754332 2234678999999999977 568999999999999999999874 44332  3345556


Q ss_pred             HHHHHhCCCCCCCCCCCCC-Cccccccccc--cCCCccccC--CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          223 KIFAAFGTATPSQWPDLAY-LPDYVEYQYV--AAPPLRSLF--PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       223 ~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~--~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      +++..++.. ...+++... +.++......  ....+..+.  ..++.++.++|.+||++||.+|||+.|+|.||||...
T Consensus       382 ~~~~~~~~~-~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        382 KIIDSLSVC-DEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             HHHHhcccC-hhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence            665554432 222322100 0000000000  000011111  1357789999999999999999999999999999865


Q ss_pred             C
Q 015948          298 P  298 (397)
Q Consensus       298 ~  298 (397)
                      .
T Consensus       461 ~  461 (501)
T PHA03210        461 E  461 (501)
T ss_pred             C
Confidence            3

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=2.4e-45  Score=341.70  Aligned_cols=263  Identities=24%  Similarity=0.432  Sum_probs=215.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ...+.|.....||+|+||.||++.+..++..||||.+.....  .....+.+|+.+++.++|+||+++++.|..++..|+
T Consensus        19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~l   96 (292)
T cd06658          19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWV   96 (292)
T ss_pred             chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH--HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEE
Confidence            345677778889999999999999999999999999865332  223457789999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||++| +|..++..  ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus        97 v~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~  174 (292)
T cd06658          97 VMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK  174 (292)
T ss_pred             EEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence            9999986 55555533  34899999999999999999999999999999999999999999999999999765443333


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      .....++..|+|||.+.+ ..++.++|+|||||++|||++|..||...+....+..+...+...    .           
T Consensus       175 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~----~-----------  238 (292)
T cd06658         175 RKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR----V-----------  238 (292)
T ss_pred             CceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCc----c-----------
Confidence            344567888999999866 568899999999999999999999998777665554443321110    0           


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                                .....++..+.+||.+||..||.+|||++++++||||.....+.
T Consensus       239 ----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~  282 (292)
T cd06658         239 ----------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS  282 (292)
T ss_pred             ----------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence                      01123478999999999999999999999999999998765544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=9.7e-45  Score=331.79  Aligned_cols=254  Identities=28%  Similarity=0.478  Sum_probs=212.9

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCCeEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGNLHLVF   90 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~~~lv~   90 (397)
                      +|.+.+.||+|+||.||+|.+..++..||+|.+............+.+|+++++.++|+||+++++++.  .+..+|++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            589999999999999999999999999999998765444444456778999999999999999999775  355789999


Q ss_pred             Eccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhH-----hCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           91 EFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCH-----KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        91 e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH-----~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      ||++ ++|...+...   ...+++..++.++.||+.||.|||     +.+++|+||||+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            9998 5787777653   456899999999999999999999     999999999999999999999999999999887


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ...........++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+....             
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------  226 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK-------------  226 (265)
T ss_pred             cCCcccccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC-------------
Confidence            654433445678888999999876 458899999999999999999999998876444433332210             


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                    ...+....+.++.+++.+||..+|++||++.++++|||+
T Consensus       227 --------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         227 --------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             --------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence                          011223457899999999999999999999999999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.3e-44  Score=329.77  Aligned_cols=250  Identities=29%  Similarity=0.468  Sum_probs=210.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|++.+.||+|+||.||++.+..++..||+|.++..... .....+.+|+.+++.++|+||+++++.|.+++.+|+||||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence            589999999999999999999999999999998754332 2334567899999999999999999999999999999999


Q ss_pred             cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           93 ME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        93 ~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ++ |+|...+... +..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++............
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (255)
T cd08219          80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT  159 (255)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence            98 5888877653 445899999999999999999999999999999999999999999999999999877554444445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+.....                     
T Consensus       160 ~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------------  217 (255)
T cd08219         160 YVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY---------------------  217 (255)
T ss_pred             ccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC---------------------
Confidence            667888999999866 5688999999999999999999999987765555444432110                     


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                            ......++..+.+||.+||+.||++||++.++++-
T Consensus       218 ------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         218 ------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                  01122347889999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6.8e-45  Score=337.49  Aligned_cols=259  Identities=28%  Similarity=0.427  Sum_probs=210.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++++.||+|+||.||+|++..++..||+|.+.... .......+.+|+.++++++|+||+++++.+...+.+|+|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME   79 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence            47999999999999999999999999999999986532 22223467789999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           92 FMET-DLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        92 ~~~g-~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |++| +|..++...  ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||++..+...  .
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~  157 (286)
T cd06622          80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--L  157 (286)
T ss_pred             ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--c
Confidence            9995 676666553  2358999999999999999999997 59999999999999999999999999999765332  2


Q ss_pred             ccccccCceeeChhcccCcc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          168 FTHQVFARWYRAPELLFGAK-----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .....++..|+|||++.+..     .++.++|+|||||++|+|++|..||...........+........          
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------  227 (286)
T cd06622         158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP----------  227 (286)
T ss_pred             cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC----------
Confidence            23345677899999985422     357899999999999999999999976554443333222111111          


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                    ..+.+.++.++.+||.+||..+|++||++++++.||||...
T Consensus       228 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~  268 (286)
T cd06622         228 --------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY  268 (286)
T ss_pred             --------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence                          11223458999999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.6e-44  Score=334.35  Aligned_cols=256  Identities=28%  Similarity=0.390  Sum_probs=207.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeee------c
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP------H   82 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~------~   82 (397)
                      -.+.|++.+.||+|+||.||+|.+..+++.+|+|++....   .....+..|+.+++++ +|+||++++++|.      .
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   90 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH   90 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence            3578999999999999999999999999999999986532   1223566799999998 6999999999984      3


Q ss_pred             CCeEEEEEEcccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           83 KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        83 ~~~~~lv~e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      ...+|++|||+++ +|..++... +..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~  170 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  170 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence            5689999999985 777777653 34588999999999999999999999999999999999999999999999999886


Q ss_pred             eCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ............++..|+|||++..    ...++.++|+|||||++|+|++|.+||...........+...    .+   
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~----~~---  243 (282)
T cd06636         171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----PP---  243 (282)
T ss_pred             hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC----CC---
Confidence            5443333445668888999999853    245788999999999999999999999766544333222110    00   


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                         .......++.++.+||.+||+.||.+|||+.|+++||||
T Consensus       244 -------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         244 -------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             -------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence                               001112357899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=3.2e-44  Score=327.17  Aligned_cols=253  Identities=28%  Similarity=0.451  Sum_probs=213.3

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+............+.+|+.+|+.++||||+++++.+..++.+++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            59999999999999999999999999999999986654444455678899999999999999999999999999999999


Q ss_pred             ccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCCCCccc
Q 015948           93 MET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        93 ~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ++| +|.+++... +..+++..+..++.+++.||.|||++|++|+||||+||+++.++ .+||+|||++....... ...
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~~~  159 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-KAY  159 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-ccc
Confidence            984 788888764 34589999999999999999999999999999999999998654 58999999998765432 223


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+.......+......                   
T Consensus       160 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  219 (256)
T cd08220         160 TVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA-------------------  219 (256)
T ss_pred             ccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC-------------------
Confidence            3567778999999976 55788999999999999999999999887665555444332110                   


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                              .+...++.++.++|.+||..||.+|||+.|+++||||
T Consensus       220 --------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         220 --------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             --------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence                    1112357899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-44  Score=331.68  Aligned_cols=257  Identities=30%  Similarity=0.417  Sum_probs=210.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC-----
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK-----   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~-----   83 (397)
                      -.++|++.+.||.|+||+||+|.+..+++.|++|++.....   ....+.+|+.+++++ .|+||++++++|...     
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            36899999999999999999999999999999999875432   234577899999999 699999999998653     


Q ss_pred             -CeEEEEEEcccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           84 -GNLHLVFEFMET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        84 -~~~~lv~e~~~g-~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                       ..+|+||||+++ +|.+.+...   +..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence             458999999995 666665442   456899999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                      ..............++..|+|||++..    ...++.++|||||||++|+|++|.+||........+..+....    ..
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~  236 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP----PP  236 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC----CC
Confidence            876554444455668888999999753    2346789999999999999999999998765555444432210    00


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      .+                     ......+.++++||.+||..||.+|||+.++++|||+
T Consensus       237 ~~---------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         237 TL---------------------KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             CC---------------------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            00                     0011247899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=3.3e-44  Score=332.78  Aligned_cols=259  Identities=27%  Similarity=0.406  Sum_probs=207.7

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeee-----e
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAF-----P   81 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~-----~   81 (397)
                      ....++|.+.+.||+|+||+||+|.+..+++.||+|++....   .....+.+|+.+++.+ +|+||+++++++     .
T Consensus        14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   90 (286)
T cd06638          14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK   90 (286)
T ss_pred             CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence            346789999999999999999999999999999999875422   1223566899999999 699999999987     3


Q ss_pred             cCCeEEEEEEcccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948           82 HKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        82 ~~~~~~lv~e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                      .++.+|+||||++| +|.+.+..   ....+++..++.++.|++.||.|||+++|+||||||+||+++.++.+||+|||+
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~  170 (286)
T cd06638          91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGV  170 (286)
T ss_pred             CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCc
Confidence            45679999999984 67766542   334689999999999999999999999999999999999999999999999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP  233 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  233 (397)
                      ++.............++..|+|||++..    ...++.++|||||||++|+|++|..||...+....+..+...    ..
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~----~~  246 (286)
T cd06638         171 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN----PP  246 (286)
T ss_pred             eeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc----CC
Confidence            9876544333445568888999999853    234788999999999999999999999776544333221110    00


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ...                     ......+..+.+||.+||+.||++|||+.|+++|+||
T Consensus       247 ~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         247 PTL---------------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             Ccc---------------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            000                     0111246789999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=4.3e-44  Score=328.35  Aligned_cols=254  Identities=29%  Similarity=0.477  Sum_probs=206.6

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc----CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      +|++.+.||+|+||+||+|.+ .+++.+|+|.+......    ......+.+|+.+++.++|+||+++++++.+.+.+|+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            588999999999999999986 47889999998754321    1122346789999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC---
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP---  164 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~---  164 (397)
                      |+||+.| +|..++.+. ..+++..+..++.||+.||+|||+.||+|+||+|+||+++.++.++|+|||++......   
T Consensus        80 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  158 (265)
T cd06631          80 FMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH  158 (265)
T ss_pred             EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence            9999985 777777654 45899999999999999999999999999999999999999999999999998764321   


Q ss_pred             ---CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 ---DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ---~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                         ........++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+....+.           
T Consensus       159 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------  226 (265)
T cd06631         159 GTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL-----------  226 (265)
T ss_pred             ccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-----------
Confidence               112234557888999999876 56889999999999999999999999876554433332221000           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                    .......++.++.+||.+||..+|.+||++.++++||||
T Consensus       227 --------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         227 --------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             --------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                          011223458899999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.8e-44  Score=331.17  Aligned_cols=258  Identities=29%  Similarity=0.506  Sum_probs=208.6

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC----CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE----GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      +|+..+.||+|+||.||+|.+..+++.||+|++.......    .....+.+|+++++.++|+||+++++++.+.+++++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            4888999999999999999999999999999987543211    123457789999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCCCC
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDR  166 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~~~  166 (397)
                      ||||+.| +|.+++.+ ...+++..+..++.||+.||.|||++|++|+||||+||+++.++ .++|+|||++........
T Consensus        81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~  159 (268)
T cd06630          81 FVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT  159 (268)
T ss_pred             EEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence            9999995 67666654 34689999999999999999999999999999999999998776 599999999987644321


Q ss_pred             c----ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 R----FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ~----~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .    .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...........+........          
T Consensus       160 ~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------  228 (268)
T cd06630         160 GAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT----------  228 (268)
T ss_pred             cCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC----------
Confidence            1    123456778999999876 5688999999999999999999999976554333333322111000          


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                                   .......++.++.+++.+||..||.+||++.++++||||.
T Consensus       229 -------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         229 -------------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             -------------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence                         0112234578999999999999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=3.6e-44  Score=335.89  Aligned_cols=261  Identities=29%  Similarity=0.441  Sum_probs=212.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.++||||+++++.+..++++|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            4799999999999999999999999999999998765322 122345668999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----  165 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----  165 (397)
                      ||++| +|..++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++......    
T Consensus        81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~  159 (305)
T cd05609          81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL  159 (305)
T ss_pred             ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence            99985 777777654 458999999999999999999999999999999999999999999999999986421100    


Q ss_pred             -----------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          166 -----------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       166 -----------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                                 .......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+..+.+..+......    
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~----  234 (305)
T cd05609         160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE----  234 (305)
T ss_pred             cccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC----
Confidence                       01112346778999999876 56899999999999999999999999887766655554432110    


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHHhcCCCCCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRYFSSAPL  299 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~l~hp~~~~~~~  299 (397)
                       ++                    .....++.++.+||.+||+.||++||+   +.++++||||....+
T Consensus       235 -~~--------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~  281 (305)
T cd05609         235 -WP--------------------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDW  281 (305)
T ss_pred             -CC--------------------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCH
Confidence             00                    001135789999999999999999998   799999999976544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=6.2e-44  Score=331.92  Aligned_cols=258  Identities=28%  Similarity=0.405  Sum_probs=208.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC-----
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK-----   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~-----   83 (397)
                      ..++|.+.+.||+|+||.||+|.+..+++.+|+|++....   .....+.+|+.+++++ +||||++++++|...     
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~   96 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG   96 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence            4788999999999999999999999999999999986432   2233566899999999 899999999998643     


Q ss_pred             CeEEEEEEcccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           84 GNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        84 ~~~~lv~e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      +.+|+||||++| +|.+++..   ....+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++.
T Consensus        97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~  176 (291)
T cd06639          97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA  176 (291)
T ss_pred             CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence            468999999985 77666643   34568999999999999999999999999999999999999999999999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccCcc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAK----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      .............++..|+|||++....    .++.++|||||||++|+|++|++||........+..+....    +..
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~----~~~  252 (291)
T cd06639         177 QLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP----PPT  252 (291)
T ss_pred             hcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC----CCC
Confidence            7654333334456788899999985432    36789999999999999999999998776655554432210    000


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                      .                     ......+..+.+||.+||+.||++||++.++++||||.
T Consensus       253 ~---------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         253 L---------------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             C---------------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            0                     00123467899999999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=2e-44  Score=330.93  Aligned_cols=251  Identities=17%  Similarity=0.224  Sum_probs=203.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|.+.+.||+|+||.||+|.+.   ..+..||+|.+..... ......+.+|+.+++.++||||+++++++..++.+|
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   82 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM   82 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence            467999999999999999999765   4567899999875432 222345778999999999999999999999999999


Q ss_pred             EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||++| +|.+++......+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+........
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~  162 (266)
T cd05064          83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI  162 (266)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence            99999995 67767766556789999999999999999999999999999999999999999999999998765422211


Q ss_pred             -cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          167 -RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       167 -~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                       ......++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+......              
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~--------------  227 (266)
T cd05064         163 YTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL--------------  227 (266)
T ss_pred             hcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC--------------
Confidence             1112234567999999876 568999999999999999774 99999888776665554322110              


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                   .....++..+.+++.+||+.+|.+||+++++++
T Consensus       228 -------------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         228 -------------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             -------------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence                         112335788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.2e-44  Score=337.84  Aligned_cols=261  Identities=25%  Similarity=0.454  Sum_probs=214.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ..|.....||+|+||.||+|.+..+++.||+|++......  ....+.+|+.+++.+.||||+++++.|..++..|+|||
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e   98 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME   98 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence            4455677899999999999999999999999998654322  23457789999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |++| +|...+..  ..+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++............
T Consensus        99 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~  176 (297)
T cd06659          99 FLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS  176 (297)
T ss_pred             cCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence            9995 66665543  34899999999999999999999999999999999999999999999999999765444333445


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||++.+ ..++.++|+|||||++|||++|.+||...+..+.+..+...    ...                
T Consensus       177 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~----------------  235 (297)
T cd06659         177 LVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS----PPP----------------  235 (297)
T ss_pred             eecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc----CCC----------------
Confidence            678889999999976 45889999999999999999999999877666555443211    000                


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~  302 (397)
                           .......++..+.++|.+||+.+|.+||+++++++||||.....+..
T Consensus       236 -----~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~  282 (297)
T cd06659         236 -----KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPEC  282 (297)
T ss_pred             -----CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCccc
Confidence                 01112345789999999999999999999999999999987655443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=3.6e-44  Score=336.25  Aligned_cols=260  Identities=27%  Similarity=0.441  Sum_probs=215.5

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ....++|.+.+.||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||++++++|.+++..
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~   90 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTA   90 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeE
Confidence            34567899999999999999999999999999999998654322 22234577899999999999999999999999999


Q ss_pred             EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      |+||||+.|++.+.+......+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++......  
T Consensus        91 ~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--  168 (307)
T cd06607          91 WLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA--  168 (307)
T ss_pred             EEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence            999999999998888766667999999999999999999999999999999999999999999999999998765332  


Q ss_pred             cccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                        ....++..|+|||++.+  ...++.++|||||||++|+|++|.+||.+.+.......+...   ..+ .         
T Consensus       169 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~---~~~-~---------  233 (307)
T cd06607         169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN---DSP-T---------  233 (307)
T ss_pred             --CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC---CCC-C---------
Confidence              23456778999999852  345888999999999999999999999877655544333211   000 0         


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                   ......+..+.+||.+||..||++||++.+++.||||...
T Consensus       234 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         234 -------------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             -------------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence                         0011247889999999999999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3.9e-44  Score=335.50  Aligned_cols=258  Identities=23%  Similarity=0.316  Sum_probs=201.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC----------------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK----------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII   74 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv   74 (397)
                      .++|++.+.||+|+||.||+|.+..                ++..||+|.+..... ......+.+|+.+|++++||||+
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCee
Confidence            5789999999999999999997532                334799999875432 22234577899999999999999


Q ss_pred             EEEeeeecCCeEEEEEEccc-cCHHHHHHhcC------------------CCCCHHHHHHHHHHHHHHHHHhHhCCcccc
Q 015948           75 ELIDAFPHKGNLHLVFEFME-TDLETVIRNTN------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHR  135 (397)
Q Consensus        75 ~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHr  135 (397)
                      ++++++.+.+..|+||||+. |+|.+++....                  ..++...+..++.||+.||.|||++||+||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~  162 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR  162 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            99999999999999999998 58888775432                  236778899999999999999999999999


Q ss_pred             CCCCCcEEEccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh--CCCC
Q 015948          136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPF  211 (397)
Q Consensus       136 Dlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~--g~~p  211 (397)
                      ||||+|||++.++.+||+|||+++.......  ......++..|+|||++.+ ..++.++|||||||++|||++  +..|
T Consensus       163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p  241 (304)
T cd05096         163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQP  241 (304)
T ss_pred             CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCC
Confidence            9999999999999999999999986543321  1223344667999999876 568999999999999999986  5678


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       212 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      |.+.+..+.+..+...+.......                    .....+.++..+.+||.+||+.||++|||+.++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         242 YGELTDEQVIENAGEFFRDQGRQV--------------------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             CCcCCHHHHHHHHHHHhhhccccc--------------------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            877766665555433221110000                    00112345789999999999999999999999954

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.9e-44  Score=346.91  Aligned_cols=252  Identities=23%  Similarity=0.335  Sum_probs=201.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC-----cEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .++|++.+.||+|+||.||+|++...|     ..||+|++...... .....+.+|+.+++.+ +|+||++++++|...+
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~  115 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGACTHGG  115 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence            567999999999999999999865443     57999998754332 2234577899999999 8999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC----------------------------------------------------------
Q 015948           85 NLHLVFEFME-TDLETVIRNTN----------------------------------------------------------  105 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~----------------------------------------------------------  105 (397)
                      .+|+|||||. |+|.+++.+..                                                          
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            9999999998 68888775421                                                          


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc--ccccc
Q 015948          106 -----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR--FTHQV  172 (397)
Q Consensus       106 -----------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~--~~~~~  172 (397)
                                 ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........  .....
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~  275 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR  275 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence                       24788899999999999999999999999999999999999999999999999875433211  11223


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      ++..|+|||++.+ ..++.++|||||||++|+|++ |.+||........+..+.......                    
T Consensus       276 ~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~--------------------  334 (374)
T cd05106         276 LPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQM--------------------  334 (374)
T ss_pred             CccceeCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCc--------------------
Confidence            4556999999976 568999999999999999997 999998765544433333221000                    


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                            .....+++++.++|.+||+.||.+|||+.++++
T Consensus       335 ------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         335 ------SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             ------cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                  001124789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=4.6e-44  Score=330.93  Aligned_cols=251  Identities=26%  Similarity=0.423  Sum_probs=199.2

Q ss_pred             eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-cchHHHHHHHHH---hcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948           19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREIKLLK---ELKSPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-~~~~~~E~~~l~---~l~hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      .||+|+||.||++.+..+++.||+|.+......... .....+|..+++   ...|+||+.++++|..++..|+||||+.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999999999999999998765433222 222344544443   3478999999999999999999999998


Q ss_pred             c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948           95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF  173 (397)
Q Consensus        95 g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  173 (397)
                      | +|...+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......  .....+
T Consensus        81 ~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~  157 (279)
T cd05633          81 GGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVG  157 (279)
T ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--ccCcCC
Confidence            5 676666544 459999999999999999999999999999999999999999999999999997654332  234568


Q ss_pred             CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI--DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      +..|+|||++.+...++.++|+|||||++|+|++|..||......  ..+......   .                    
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---~--------------------  214 (279)
T cd05633         158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---V--------------------  214 (279)
T ss_pred             CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc---C--------------------
Confidence            889999999865466889999999999999999999999764322  222111100   0                    


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                          ...+.+.++.++.++|.+||..||++|+     +++++++||||.+..+
T Consensus       215 ----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~  263 (279)
T cd05633         215 ----NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDW  263 (279)
T ss_pred             ----CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCH
Confidence                0112234589999999999999999999     6999999999988554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=3e-44  Score=327.52  Aligned_cols=254  Identities=28%  Similarity=0.506  Sum_probs=213.0

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|.+.+.||+|+||.||+|.++.+|..+|+|.+............+.+|+.+++.++|+||+++++.+.+.+..|+|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            58999999999999999999999999999999876543333445677899999999999999999999999999999999


Q ss_pred             cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc-EEEeeeccceeeCCCCCccc
Q 015948           93 ME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        93 ~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~-~kl~DFG~a~~~~~~~~~~~  169 (397)
                      +. ++|.+.+.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++. +||+|||.+...........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY  160 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence            98 58888776543 35899999999999999999999999999999999999998864 69999999987755443344


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+....                     
T Consensus       161 ~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---------------------  218 (257)
T cd08225         161 TCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY---------------------  218 (257)
T ss_pred             ccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc---------------------
Confidence            4567888999999866 458899999999999999999999998766554444332210                     


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                            .....+.++.++.++|.+||..+|++|||+.+++.||||
T Consensus       219 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         219 ------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             ------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence                  011223557899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.4e-44  Score=330.32  Aligned_cols=252  Identities=27%  Similarity=0.431  Sum_probs=210.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      +|++.+.||.|+||.||+|.+..+++.||+|++....... .....+.+|++++++++||||+++++.+..+..+|+|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            5899999999999999999999999999999997654322 334567789999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |+.| +|...+.+. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....... ....
T Consensus        81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~  158 (258)
T cd05578          81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTS  158 (258)
T ss_pred             CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cccc
Confidence            9985 777776654 569999999999999999999999999999999999999999999999999998764432 2334


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--IDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ..++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+.  .+.+.....   ..                 
T Consensus       159 ~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~-----------------  217 (258)
T cd05578         159 TSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE---TA-----------------  217 (258)
T ss_pred             cCCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc---cc-----------------
Confidence            556778999999876 5589999999999999999999999987664  222222111   00                 


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH--HHHhcCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA--QQALEHRYF  294 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~--~e~l~hp~~  294 (397)
                             .....+.++.++.++|.+||..||.+|+++  +|+++||||
T Consensus       218 -------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         218 -------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             -------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence                   011223457899999999999999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=7.4e-44  Score=324.97  Aligned_cols=254  Identities=28%  Similarity=0.473  Sum_probs=210.8

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      +|+..+.||+|+||+||+|.+..++..|++|.+......   ......+.+|+.+++.++|+||+++++++..+..+|+|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            588899999999999999999989999999998764422   12334577899999999999999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      +||++| +|.+++.+. ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++....... ..
T Consensus        81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~  158 (258)
T cd06632          81 LELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FA  158 (258)
T ss_pred             EEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-cc
Confidence            999985 777777654 458999999999999999999999999999999999999999999999999998764433 23


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ....++..|+|||.+.....++.++|+|||||++|+|++|.+||...........+....                    
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~--------------------  218 (258)
T cd06632         159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK--------------------  218 (258)
T ss_pred             cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc--------------------
Confidence            445678889999998663348899999999999999999999998766444443332110                    


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                            ....+.+.++.++.+|+.+||+.+|.+||++.+++.|||+
T Consensus       219 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         219 ------ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             ------cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence                  0011223458999999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=6e-44  Score=327.72  Aligned_cols=255  Identities=25%  Similarity=0.462  Sum_probs=205.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC---ccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG---VNFTALREIKLLKELKSPHIIELIDAFPH--KGNL   86 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~   86 (397)
                      .+|.+.+.||+|+||.||+|.+..++..||+|++........   ....+.+|+.+++.++||||+++++.+.+  ...+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            368999999999999999999999999999999875543221   22346789999999999999999998865  4678


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ++++||++| +|...+.... .+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC  160 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence            999999985 7777776544 48999999999999999999999999999999999999999999999999997653221


Q ss_pred             ---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                         .......++..|+|||++.+ ..++.++|+|||||++|+|++|++||...........+...   ...         
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~---~~~---------  227 (266)
T cd06651         161 MSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQ---PTN---------  227 (266)
T ss_pred             ccCCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcC---CCC---------
Confidence               11223457778999999976 56889999999999999999999999876554443332111   100         


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                                    ..+...+++.+++|| +||..+|++||+++|+++||||+
T Consensus       228 --------------~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         228 --------------PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             --------------CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence                          011123478899999 57778999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-45  Score=361.79  Aligned_cols=249  Identities=28%  Similarity=0.443  Sum_probs=200.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeee-ec---C--
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAF-PH---K--   83 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~-~~---~--   83 (397)
                      .-+++|.+.|.+|||+.||+|++...|..||+|.+...  .+.....+.+||++|+.|+ |+|||.++|.. ..   +  
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            34678999999999999999999988899999998754  3444456779999999997 99999999932 11   1  


Q ss_pred             -CeEEEEEEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           84 -GNLHLVFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        84 -~~~~lv~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                       -.++|+||||. |+|.+++.++ ...|++.++..|++++++|+.+||...  |||||||-|||||+.+|+.||||||.|
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa  193 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA  193 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence             24789999999 6999998754 234999999999999999999999998  999999999999999999999999999


Q ss_pred             eeeCCCCC---------cccccccCceeeChhcc--cCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Q 015948          159 RIFGSPDR---------RFTHQVFARWYRAPELL--FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA  227 (397)
Q Consensus       159 ~~~~~~~~---------~~~~~~~t~~y~aPE~l--~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~  227 (397)
                      +-......         .......|+.|+|||++  ..+...+.|+|||+|||+||-|+....||.......++.-    
T Consensus       194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng----  269 (738)
T KOG1989|consen  194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNG----  269 (738)
T ss_pred             ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEec----
Confidence            75322211         11234458889999997  3446689999999999999999999999987744322211    


Q ss_pred             hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                         .|   ..|+    ++..|..+++||..||+.||.+||++.|++.+
T Consensus       270 -------------------~Y---~~P~----~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  270 -------------------NY---SFPP----FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             -------------------cc---cCCC----CccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence                               11   1111    24568999999999999999999999998863

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=3.1e-44  Score=331.66  Aligned_cols=257  Identities=26%  Similarity=0.421  Sum_probs=212.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+.|...+.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+.|+||+++++.+.++..+|+||
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM   81 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            4678899999999999999999999999999999875432 222345778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++| +|.+.+...  .+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus        82 e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06640          82 EYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             ecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence            99985 777776543  489999999999999999999999999999999999999999999999999987654443334


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||++.+ ..++.++|+|||||++|||++|.+||...+.......+...   ..                 
T Consensus       160 ~~~~~~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~---~~-----------------  218 (277)
T cd06640         160 TFVGTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN---NP-----------------  218 (277)
T ss_pred             cccCcccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC---CC-----------------
Confidence            4567788999999876 45789999999999999999999999876654433322110   00                 


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                             ......++..+.++|.+||..+|++||++.+++.|+||....
T Consensus       219 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06640         219 -------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA  260 (277)
T ss_pred             -------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence                   111223478899999999999999999999999999997643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.4e-45  Score=347.37  Aligned_cols=264  Identities=26%  Similarity=0.413  Sum_probs=217.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ...|+.++.||-|+||.|.+++...|...||+|.+++.. ...........|.+||..-.++-||+||..|++++.+|+|
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            456899999999999999999998999999999998654 2233344566799999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC----
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP----  164 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~----  164 (397)
                      |||++ ||+..++.+.+. |+|..+++|+.+|.+|+++.|.+|+|||||||+|||||.+|++||+|||+++-+...    
T Consensus       708 MdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk  786 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK  786 (1034)
T ss_pred             EeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccc
Confidence            99998 689999887665 999999999999999999999999999999999999999999999999998633100    


Q ss_pred             -----C---------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH
Q 015948          165 -----D---------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL  206 (397)
Q Consensus       165 -----~---------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell  206 (397)
                           +                                 -.....+||+.|+|||++.. ..|+..+|+||.|||||||+
T Consensus       787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~  865 (1034)
T KOG0608|consen  787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEML  865 (1034)
T ss_pred             cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHh
Confidence                 0                                 01124678999999999986 67999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC---
Q 015948          207 NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI---  283 (397)
Q Consensus       207 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~---  283 (397)
                      .|++||...+..+.-.+++         +|.....++               .-..+|.++.++|.+++. +++.|+   
T Consensus       866 ~g~~pf~~~tp~~tq~kv~---------nw~~~l~~~---------------~~~~ls~e~~~li~kLc~-sad~RLGkn  920 (1034)
T KOG0608|consen  866 VGQPPFLADTPGETQYKVI---------NWRNFLHIP---------------YQGNLSKEALDLIQKLCC-SADSRLGKN  920 (1034)
T ss_pred             hCCCCccCCCCCcceeeee---------ehhhccccc---------------cccccCHHHHHHHHHHhc-Chhhhhccc
Confidence            9999999887655443332         232222211               113569999999999764 788887   


Q ss_pred             CHHHHhcCCCCCCCCCCC
Q 015948          284 TAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       284 t~~e~l~hp~~~~~~~~~  301 (397)
                      .++|+..||||+...+..
T Consensus       921 g~d~vKaHpfFkgIDfss  938 (1034)
T KOG0608|consen  921 GADQVKAHPFFKGIDFSS  938 (1034)
T ss_pred             chhhhhcCccccccchHh
Confidence            477899999999877644

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=4.5e-44  Score=344.46  Aligned_cols=253  Identities=24%  Similarity=0.338  Sum_probs=201.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .++|++.+.||+|+||+||+|.+     ..++..||||+++.... ......+.+|+.+|+.+ +||||++++++|...+
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~  112 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGG  112 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence            45899999999999999999974     34567899999864432 22234577899999999 8999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC----------------------------------------------------------
Q 015948           85 NLHLVFEFME-TDLETVIRNTN----------------------------------------------------------  105 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~----------------------------------------------------------  105 (397)
                      ..|+|||||. |+|.+++....                                                          
T Consensus       113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence            9999999998 68888876432                                                          


Q ss_pred             ----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc--
Q 015948          106 ----------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR--  167 (397)
Q Consensus       106 ----------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~--  167 (397)
                                      ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........  
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  272 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV  272 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence                            14678889999999999999999999999999999999999999999999999876443221  


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+......+.+++..-...               
T Consensus       273 ~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---------------  336 (375)
T cd05104         273 KGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM---------------  336 (375)
T ss_pred             cCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC---------------
Confidence            112234556999999976 568999999999999999997 889998765544444333210000               


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                 ......+.++.+||.+||+.||++||++.|+++.
T Consensus       337 -----------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         337 -----------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             -----------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                       0011236899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=5.1e-44  Score=330.21  Aligned_cols=256  Identities=28%  Similarity=0.403  Sum_probs=206.9

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL   97 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L   97 (397)
                      ||+|+||+||+|.+..+|+.||+|++....... .....+.+|+.+|+.++||||+++++.|...+.+|+||||++ ++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            699999999999999999999999987643222 223345689999999999999999999999999999999998 578


Q ss_pred             HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCce
Q 015948           98 ETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW  176 (397)
Q Consensus        98 ~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~  176 (397)
                      .+.+.+.. ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++..... ........++..
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~  159 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKGRAGTPG  159 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCccccccCCCC
Confidence            87776644 3589999999999999999999999999999999999999999999999999876543 223334556778


Q ss_pred             eeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCc
Q 015948          177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL  256 (397)
Q Consensus       177 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (397)
                      |+|||++.+ ..++.++|+|||||++|+|++|+.||...........+.......                        .
T Consensus       160 y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------~  214 (277)
T cd05577         160 YMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM------------------------A  214 (277)
T ss_pred             cCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc------------------------c
Confidence            999999876 448899999999999999999999998765422222221110000                        0


Q ss_pred             cccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCCC
Q 015948          257 RSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       257 ~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~~  301 (397)
                      ....+.+++.+.++|.+||+.||.+||     ++.++++||||....+..
T Consensus       215 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~  264 (277)
T cd05577         215 VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR  264 (277)
T ss_pred             ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhh
Confidence            112234589999999999999999999     899999999998766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-44  Score=329.39  Aligned_cols=257  Identities=25%  Similarity=0.456  Sum_probs=211.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .|.+.+.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+.   |||++++++++..+...|+|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            58899999999999999999999999999999875432 222345678999999996   99999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||+.| +|..++...  .+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++..........
T Consensus        81 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          81 MEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             EecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence            999985 676666543  58999999999999999999999999999999999999999999999999998876555444


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ....++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.........+.    ...+..++           
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~----~~~~~~~~-----------  223 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP----KSKPPRLE-----------  223 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc----cCCCCCCC-----------
Confidence            556788889999998765667899999999999999999999998765433222110    00000000           


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                 ....+.++.+++.+||..||++||++.+++.|+||....
T Consensus       224 -----------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         224 -----------DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             -----------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence                       012478999999999999999999999999999997643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.7e-44  Score=330.75  Aligned_cols=257  Identities=29%  Similarity=0.481  Sum_probs=210.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|.+...... .....+.+|+++++.++||||+++++.+..++.+|+|+|
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME   79 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence            4689999999999999999999999999999998765432 334467789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |++ ++|.+++......+++..+..++.||+.||.|||+ .|++|+||||+||+++.++.++|+|||.+.........  
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~--  157 (265)
T cd06605          80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK--  157 (265)
T ss_pred             ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh--
Confidence            999 58888877665679999999999999999999999 99999999999999999999999999998765332211  


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHH-hCCCCCCCCCCCCCCccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAA-FGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ...++..|+|||.+.+ ..++.++|+|||||++|+|++|..||..... .+.....++. .....+              
T Consensus       158 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------  222 (265)
T cd06605         158 TFVGTSSYMAPERIQG-NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP--------------  222 (265)
T ss_pred             cccCChhccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC--------------
Confidence            2567778999999876 5789999999999999999999999865421 1111111111 111100              


Q ss_pred             cccccCCCccccCCC-CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          248 YQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                ..... ++.++++||.+||..||++|||+.+++.||||+.
T Consensus       223 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         223 ----------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             ----------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence                      00111 5789999999999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.5e-43  Score=324.16  Aligned_cols=257  Identities=28%  Similarity=0.469  Sum_probs=209.9

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.++|+||+++++.+...+.+++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            69999999999999999999999999999999976654433455678999999999999999999999999999999999


Q ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc--
Q 015948           93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT--  169 (397)
Q Consensus        93 ~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~--  169 (397)
                      +.+ +|.+.+.+. ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++...........  
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~  159 (264)
T cd06626          81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE  159 (264)
T ss_pred             CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence            984 677766654 4589999999999999999999999999999999999999999999999999987654333221  


Q ss_pred             --ccccCceeeChhcccCcc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          170 --HQVFARWYRAPELLFGAK--QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       170 --~~~~t~~y~aPE~l~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                        ...++..|+|||++.+..  .++.++|||||||++|+|++|..||...............   ......+        
T Consensus       160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~--------  228 (264)
T cd06626         160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPIP--------  228 (264)
T ss_pred             ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCCC--------
Confidence              245677899999987632  2788999999999999999999999766433322221111   1111111        


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                   ....++..+.+||.+||+.+|.+|||+.+++.|||+
T Consensus       229 -------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         229 -------------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             -------------cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                         112347889999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.6e-43  Score=324.71  Aligned_cols=255  Identities=26%  Similarity=0.479  Sum_probs=205.7

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC---CccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE---GVNFTALREIKLLKELKSPHIIELIDAFPHK--GNL   86 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~   86 (397)
                      ++|.+.+.||+|+||.||+|++..+|..||||.+.......   .....+.+|+.+++.+.|+||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            47999999999999999999999999999999986533221   1223567899999999999999999998763  578


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||++| +|.+.+.+. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++......
T Consensus        82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~  160 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC  160 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence            899999984 777777654 348899999999999999999999999999999999999999999999999998653221


Q ss_pred             ---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                         .......++..|+|||++.+ ..++.++|+|||||++|+|++|++||...........+..   ....         
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~---------  227 (265)
T cd06652         161 LSGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTN---------  227 (265)
T ss_pred             ccccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCC---------
Confidence               12233457788999999876 5688999999999999999999999987654444333211   1100         


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                                    ....+.++..+.++|.+|+. +|++||+++++++|||+.
T Consensus       228 --------------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         228 --------------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             --------------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence                          01123457889999999995 999999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=4.4e-44  Score=332.39  Aligned_cols=261  Identities=21%  Similarity=0.342  Sum_probs=207.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|...+.||+|+||.||++.+..+++.||+|.+...... .....+.+|+.++.++. |+||+++++++..++..+++|
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~   82 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM   82 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence            5677889999999999999999999999999998754332 22345678999999996 999999999999999999999


Q ss_pred             EccccCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           91 EFMETDLETVIR----NTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        91 e~~~g~L~~~~~----~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ||+++++..+..    .....+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++.......
T Consensus        83 e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  162 (288)
T cd06616          83 ELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI  162 (288)
T ss_pred             ecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence            999976654432    2235699999999999999999999975 99999999999999999999999999997654322


Q ss_pred             CcccccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 RRFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                       ......++..|+|||++.+.  ..++.++|||||||++|+|++|++||.....  ....+.+......+.. +      
T Consensus       163 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~-~------  232 (288)
T cd06616         163 -AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPIL-S------  232 (288)
T ss_pred             -ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcC-C------
Confidence             22334577889999999764  3689999999999999999999999976542  2222222111111000 0      


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                   ......++.++.+||.+||+.||++|||++++++||||..
T Consensus       233 -------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         233 -------------NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             -------------CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence                         0111245889999999999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-46  Score=346.81  Aligned_cols=266  Identities=24%  Similarity=0.383  Sum_probs=233.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++.++..||-|+||.|=++........+|+|++++... ...+.+.+..|-+||..+..|+||++|-.|.++.++|++
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL  498 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML  498 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence            4567788899999999999998776666799999987653 344555678899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||-|- |.++..+++++ .|++..++.|+..+++|++|||++|||+|||||+|.+++.+|-+||.|||+|+.+++. ..+
T Consensus       499 mEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g-~KT  576 (732)
T KOG0614|consen  499 MEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG-RKT  576 (732)
T ss_pred             HHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC-Cce
Confidence            99986 68888888765 4999999999999999999999999999999999999999999999999999998764 456


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      .+.|||+.|.|||++++ +..+.++|.||||+++|||++|.|||.+.+....+..|++++...                 
T Consensus       577 wTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i-----------------  638 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-----------------  638 (732)
T ss_pred             eeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-----------------
Confidence            67899999999999987 678999999999999999999999999999999999998875321                 


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPTEPNK  305 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~~~~  305 (397)
                               .++..++..+.+||.++...+|.+|..     ..+|..|.||.+..|..-...
T Consensus       639 ---------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~  691 (732)
T KOG0614|consen  639 ---------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSR  691 (732)
T ss_pred             ---------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence                     222456889999999999999999986     789999999999888654433

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=9.2e-44  Score=328.76  Aligned_cols=253  Identities=27%  Similarity=0.413  Sum_probs=199.3

Q ss_pred             eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-cchHHHHH---HHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948           19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREI---KLLKELKSPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-~~~~~~E~---~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      .||+|+||.||+|++..+++.||+|.+......... ......|.   .+++...||+|++++++|...+.+|+||||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999999999999999998765432221 11233343   44555689999999999999999999999998


Q ss_pred             c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948           95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF  173 (397)
Q Consensus        95 g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  173 (397)
                      | +|...+.. ...+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++..+...  ......|
T Consensus        81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~  157 (278)
T cd05606          81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVG  157 (278)
T ss_pred             CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCcCC
Confidence            5 66665554 456999999999999999999999999999999999999999999999999999765432  2234568


Q ss_pred             CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948          174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA  253 (397)
Q Consensus       174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (397)
                      +..|+|||++.+...++.++||||+||++|+|++|..||.+......... ....... .                    
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~-~--------------------  215 (278)
T cd05606         158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTM-A--------------------  215 (278)
T ss_pred             CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-HHHhhcc-C--------------------
Confidence            88899999997655689999999999999999999999987632211111 0000000 0                    


Q ss_pred             CCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          254 PPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                         .......|.++.++|.+||..||.+|+     ++.++++||||....+
T Consensus       216 ---~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~  263 (278)
T cd05606         216 ---VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDW  263 (278)
T ss_pred             ---CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCc
Confidence               011223489999999999999999999     9999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.2e-44  Score=334.40  Aligned_cols=256  Identities=27%  Similarity=0.423  Sum_probs=210.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      +.+.|.+.+.||+|+||.||+|.+..++..||+|.+...... .....+.+|+.+++.++|+||+++++.|..+..+|+|
T Consensus         2 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06642           2 PEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII   80 (277)
T ss_pred             hHHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch-HHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE
Confidence            356788999999999999999999999999999998654322 2334577899999999999999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||++| +|...+..  ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..........
T Consensus        81 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06642          81 MEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             EEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhh
Confidence            999995 67666653  348999999999999999999999999999999999999999999999999998765443333


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ....++..|+|||++.+ ..++.++|+|||||++|||++|.+||...........+...    .+               
T Consensus       159 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~----~~---------------  218 (277)
T cd06642         159 NTFVGTPFWMAPEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN----SP---------------  218 (277)
T ss_pred             hcccCcccccCHHHhCc-CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC----CC---------------
Confidence            34567788999999876 56889999999999999999999998765443332221110    00               


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                              ......++.++.++|.+||..+|.+||++.++++||||..
T Consensus       219 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         219 --------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             --------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence                    0111234788999999999999999999999999999864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.3e-43  Score=326.40  Aligned_cols=259  Identities=27%  Similarity=0.473  Sum_probs=208.2

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC--------ccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--------VNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~--------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      +|.+.+.||.|+||.||+|.+..+|+.||+|.+........        ....+.+|+.+++.++|+||+++++++....
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            58999999999999999999998999999998865322111        1234567999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ..++||||+. |+|.+.+.+. ..+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~  160 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD  160 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence            9999999998 5777777665 4689999999999999999999999999999999999999999999999999976533


Q ss_pred             CC--CcccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          164 PD--RRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       164 ~~--~~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      ..  .......++..|+|||++.+.. .++.++|+|||||++|+|++|..||...+....+..+..   .......    
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~----  233 (272)
T cd06629         161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGN---KRSAPPI----  233 (272)
T ss_pred             cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhc---cccCCcC----
Confidence            21  1123345677899999986533 478999999999999999999999976554433322211   1000000    


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                     .....+.++.++.+||.+||..+|.+||+++++++||||
T Consensus       234 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         234 ---------------PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             ---------------CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence                           012234568999999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2.1e-43  Score=327.50  Aligned_cols=259  Identities=27%  Similarity=0.478  Sum_probs=213.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ..+|.-.+.||+|++|.||++.+..+++.+++|++.....  .....+.+|+.+++.++|+||+++++++...+..|+|+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~   95 (285)
T cd06648          18 RSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM   95 (285)
T ss_pred             hHhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence            3467777899999999999999999999999998864322  22335778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||+.| +|.+.+..  ..+++..+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||++...........
T Consensus        96 e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~  173 (285)
T cd06648          96 EFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK  173 (285)
T ss_pred             eccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence            99984 77777765  4589999999999999999999999999999999999999999999999998876544333334


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+....    +...             
T Consensus       174 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~----~~~~-------------  235 (285)
T cd06648         174 SLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL----PPKL-------------  235 (285)
T ss_pred             cccCCccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC----CCCC-------------
Confidence            4567888999999876 458899999999999999999999998776655555443320    0000             


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                              .....++..+.+||.+||+.+|++||++.++++|+||.....
T Consensus       236 --------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         236 --------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             --------cccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence                    011235789999999999999999999999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.6e-43  Score=322.28  Aligned_cols=254  Identities=28%  Similarity=0.504  Sum_probs=216.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|.+.+.||.|+||.||++.+..++..||+|++............+.+|+++++.++|+|++++++.+..++..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            58999999999999999999999999999999976555444555678899999999999999999999999999999999


Q ss_pred             ccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           93 MET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        93 ~~g-~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ++| +|...+...   +..+++..+..++.+|+.||.|||++|++|+||+|+||+++.++.++|+|||++..........
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence            985 788887765   3679999999999999999999999999999999999999999999999999998876554334


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+....    .               
T Consensus       161 ~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~----~---------------  220 (258)
T cd08215         161 KTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ----Y---------------  220 (258)
T ss_pred             cceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC----C---------------
Confidence            44567888999999876 558899999999999999999999998776544444332210    0               


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                              ..+....+.++.+++.+||..+|++|||+.++|+||||
T Consensus       221 --------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         221 --------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence                    11122457899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=2.8e-43  Score=331.11  Aligned_cols=261  Identities=26%  Similarity=0.416  Sum_probs=217.1

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ....+.|...+.||+|+||+||+|++..+|..|++|++....... .....+.+|+.+++.++|+|++++++++.+....
T Consensus        17 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   96 (313)
T cd06633          17 DDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTA   96 (313)
T ss_pred             CCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE
Confidence            345667888899999999999999999999999999987654322 2224567899999999999999999999999999


Q ss_pred             EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      |+||||+.|++...+......+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++.....   
T Consensus        97 ~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---  173 (313)
T cd06633          97 WLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---  173 (313)
T ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence            99999999999998887777799999999999999999999999999999999999999999999999999865322   


Q ss_pred             cccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                       .....++..|+|||++..  ...++.++|+|||||++|+|++|.+||...+.......+.....   +           
T Consensus       174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~-----------  238 (313)
T cd06633         174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS---P-----------  238 (313)
T ss_pred             -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC---C-----------
Confidence             234567888999999842  24578899999999999999999999887766555554432100   0           


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                  ......++..+++||.+||+.+|.+||++.+++.||||....
T Consensus       239 ------------~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         239 ------------TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             ------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence                        001123467899999999999999999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=7e-44  Score=332.08  Aligned_cols=258  Identities=29%  Similarity=0.489  Sum_probs=213.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||+||++.+..+++.||+|.+.....  .....+.+|+.+++.++||||+++++.|...+..|+|+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence            6899999999999999999999988999999999864322  22346778999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++ ++|..++.+.  .+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus        96 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~  173 (293)
T cd06647          96 EYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  173 (293)
T ss_pred             ecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence            9998 5777777654  378999999999999999999999999999999999999999999999999887655444444


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+....+..+...    ....              
T Consensus       174 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~----~~~~--------------  234 (293)
T cd06647         174 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN----GTPE--------------  234 (293)
T ss_pred             cccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC----CCCC--------------
Confidence            5568888999999876 55789999999999999999999999876654433222110    0000              


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                             ......++..+++||.+||..+|++||++.+++.|+||....
T Consensus       235 -------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         235 -------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             -------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence                   011123478899999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.5e-43  Score=324.22  Aligned_cols=251  Identities=25%  Similarity=0.437  Sum_probs=207.7

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL   97 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L   97 (397)
                      ||.|+||.||+|++..+++.||+|++.+.... ......+.+|+.+++.++||||+++++.+.++..+|+|+||++ ++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            69999999999999999999999999765432 2334467789999999999999999999999999999999998 578


Q ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCcee
Q 015948           98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY  177 (397)
Q Consensus        98 ~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y  177 (397)
                      .+.+.+. ..+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++....... ......++..|
T Consensus        81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~  158 (262)
T cd05572          81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEY  158 (262)
T ss_pred             HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCc
Confidence            7777654 348999999999999999999999999999999999999999999999999998765432 23344678889


Q ss_pred             eChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCC
Q 015948          178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP  255 (397)
Q Consensus       178 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (397)
                      ++||.+.+ ..++.++|+|||||++|+|++|..||....  ..+....+......                         
T Consensus       159 ~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------  212 (262)
T cd05572         159 VAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGK-------------------------  212 (262)
T ss_pred             cChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCC-------------------------
Confidence            99999865 558899999999999999999999998776  33344333321000                         


Q ss_pred             ccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948          256 LRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL  299 (397)
Q Consensus       256 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~  299 (397)
                       .......++++.++|.+||..||++|++     ++|+++||||.+..+
T Consensus       213 -~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         213 -LEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             -CCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence             0111233789999999999999999999     999999999987543

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-45  Score=313.66  Aligned_cols=258  Identities=26%  Similarity=0.384  Sum_probs=211.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++..++..||+|+.|+||+++.+.+|...|||.++.....++ ..+++..+.++... .+|+||+.+++|..+..+++.|
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee-~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM  170 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM  170 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHH-HHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence            345667889999999999999999999999999987655543 33566666665544 5899999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |.|..=+..+++.-..+++|..+-.+...++.||.||..+ ||+|||+||+|||+|+.|++||||||++-.+-+. ..-+
T Consensus       171 elMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-kAht  249 (391)
T KOG0983|consen  171 ELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-KAHT  249 (391)
T ss_pred             HHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc-cccc
Confidence            9998655555665566799999999999999999999854 8999999999999999999999999999876443 2334


Q ss_pred             ccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          170 HQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ...|.+.|||||.+.-  ...|+.++||||||++|+||.||+.||.+. .+.+.+-++.+...   |             
T Consensus       250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP---P-------------  313 (391)
T KOG0983|consen  250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP---P-------------  313 (391)
T ss_pred             cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC---C-------------
Confidence            5567778999999843  346999999999999999999999999985 56788877765311   1             


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                               .-..-...|+++.+|+..||++|+.+||...++|+|||+..
T Consensus       314 ---------~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  314 ---------LLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR  354 (391)
T ss_pred             ---------CCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence                     11111235999999999999999999999999999999864

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-44  Score=320.42  Aligned_cols=311  Identities=23%  Similarity=0.332  Sum_probs=242.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .++|.++++||+|+|++|.++++++|.+.||+|++++....+. .......|..+..+- +||++|-++.+|+.+..+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            5789999999999999999999999999999999987654332 233445677777765 68999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |.||++ |+|...+.++.. ++++.++.|..+|+-||.|||++||++||||.+|+||+..|++||+|+|+++..-.+...
T Consensus       329 vieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~  407 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT  407 (593)
T ss_pred             EEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence            999998 588887776654 999999999999999999999999999999999999999999999999999987777778


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCC-------CCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG-------SSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      ..+.+||+.|.|||++.+ ..|+.++|+|+|||++|||+.|+.||+-       .+..+.+-+++-.-.           
T Consensus       408 tstfcgtpnyiapeilrg-eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq-----------  475 (593)
T KOG0695|consen  408 TSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ-----------  475 (593)
T ss_pred             cccccCCCcccchhhhcc-cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc-----------
Confidence            889999999999999988 6799999999999999999999999962       122223322221100           


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC------HHHHhcCCCCCCCCCCCCCCCCCCcccccc
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRYFSSAPLPTEPNKLPRPATKRA  314 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t------~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~  314 (397)
                                      -.++..+|-.+..+++..|.+||.+|..      ..++..|+||....|..-..+...|+..+.
T Consensus       476 ----------------iriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~  539 (593)
T KOG0695|consen  476 ----------------IRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQ  539 (593)
T ss_pred             ----------------ccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCc
Confidence                            1233455778889999999999999974      688999999998887654333333333222


Q ss_pred             ----CCCCCCCC--CCCCcccCCcccccCCCCCCCCCCCCCC
Q 015948          315 ----SKASDFNP--QEGPTVLSPPRKTRRVMPDREGFEGNAN  350 (397)
Q Consensus       315 ----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (397)
                          -....+..  ..++..++|...-.....+++.|+|...
T Consensus       540 i~~d~~l~~fd~qft~e~~qltpdd~d~i~ridqsefegfey  581 (593)
T KOG0695|consen  540 ITDDYGLDNFDTQFTSEPVQLTPDDEDAIKRIDQSEFEGFEY  581 (593)
T ss_pred             cccccCccccccccccCCcccCCCCHHHHHhcchhhcCccee
Confidence                22223333  2444555555444444456777777654

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2e-43  Score=323.27  Aligned_cols=256  Identities=29%  Similarity=0.499  Sum_probs=214.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|.+.+.||+|++|.||+|.+..+++.|++|++...... .....+.+|+.++..++|+||+++++++...+.+|+|||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE   79 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence            4689999999999999999999999999999998765432 334567789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |++ ++|.+.+... ..+++..+..++.||+.||.|||+ +|++|+||+|+||+++.++.++|+|||++...........
T Consensus        80 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  158 (264)
T cd06623          80 YMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN  158 (264)
T ss_pred             ecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence            999 5777777654 569999999999999999999999 9999999999999999999999999999987755444433


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--cH-HHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--DI-DQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ...++..|+|||.+.+ ..++.++|+||||+++|+|++|.+||....  .. +....+..    ...             
T Consensus       159 ~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----~~~-------------  220 (264)
T cd06623         159 TFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD----GPP-------------  220 (264)
T ss_pred             ceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc----CCC-------------
Confidence            5567788999999876 568899999999999999999999998775  22 22222211    000             


Q ss_pred             ccccccCCCccccCCC-CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                ...... ++..+.++|.+||..+|++||++.++++|||++..
T Consensus       221 ----------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         221 ----------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             ----------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence                      011122 57899999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1e-43  Score=329.01  Aligned_cols=252  Identities=22%  Similarity=0.328  Sum_probs=206.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC-----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|++.+.||+|+||.||+|.+...+     ..||+|.+..... ......+.+|+.+++.++||||+++++++...+.
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP   82 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence            467999999999999999999876555     6799998864322 2223457789999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc
Q 015948           86 LHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ  149 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~  149 (397)
                      .|++|||++ |+|.+++....               ..+++..+..++.||+.||.|||++|++||||||+||+++.++.
T Consensus        83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~  162 (283)
T cd05048          83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT  162 (283)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc
Confidence            999999998 58888876532               34788999999999999999999999999999999999999999


Q ss_pred             EEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHH
Q 015948          150 LKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA  226 (397)
Q Consensus       150 ~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~  226 (397)
                      ++|+|||++.......  .......+++.|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+....+..
T Consensus       163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~  241 (283)
T cd05048         163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS  241 (283)
T ss_pred             EEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            9999999998654332  12334456778999999876 458999999999999999997 9999988776665555433


Q ss_pred             HhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ...                           ......++.++.+|+.+||+.||.+||++.+++++
T Consensus       242 ~~~---------------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         242 RQL---------------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CCc---------------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            210                           01123458999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=3.3e-43  Score=323.15  Aligned_cols=249  Identities=22%  Similarity=0.350  Sum_probs=200.3

Q ss_pred             hhcceeeeeee--eecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeE
Q 015948           10 VADRYLKREVL--GEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        10 ~~~~y~i~~~L--G~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~   86 (397)
                      ..++|.+.+.+  |+|+||.||++.++.++..+|+|.+.......       .|+.....+ +|+||+++++.|...+.+
T Consensus        12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence            35678887777  99999999999999999999999986543221       133333222 799999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSP  164 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~  164 (397)
                      |+||||++ |+|..++.... .+++..++.++.||+.||.|||++|++||||||+||+++.++ .++|+|||++......
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  163 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP  163 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence            99999998 58888887654 699999999999999999999999999999999999999998 9999999999876433


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCCCCCCCCCCCc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-LGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .    ...++..|+|||++.+ ..++.++|+|||||++|+|++|..||........ ...+.... ..            
T Consensus       164 ~----~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~------------  225 (267)
T PHA03390        164 S----CYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK------------  225 (267)
T ss_pred             c----cCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc------------
Confidence            2    2356778999999976 5688999999999999999999999986543321 12221111 00            


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-HHHHhcCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-AQQALEHRYFSS  296 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-~~e~l~hp~~~~  296 (397)
                                  .....+.+++.+.+||.+||+.||.+|++ .+++|+||||.+
T Consensus       226 ------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        226 ------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             ------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence                        00122356899999999999999999996 599999999964

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-44  Score=344.23  Aligned_cols=245  Identities=27%  Similarity=0.441  Sum_probs=205.2

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHH-hcCCCCeeEEEeeeecCCeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK-ELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~-~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .+.+.|.+...+|.|+|+.|-.+.+..+++.+++|++.+.....      .+|+.++. .-+||||+++.+.+.++.+.|
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~------~~e~~~~~~~~~h~niv~~~~v~~~~~~~~  392 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDN------QDEIPISLLVRDHPNIVKSHDVYEDGKEIY  392 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheecccccccc------ccccchhhhhcCCCcceeecceecCCceee
Confidence            36788999999999999999999999999999999997662221      25775554 458999999999999999999


Q ss_pred             EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE-ccCCcEEEeeeccceeeCCCC
Q 015948           88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl-~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      +|||++.| .+++.+..... +. .++..|+++|+.|+.|||++|++||||||+|||+ +..|+++|+|||.++..... 
T Consensus       393 ~v~e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-  469 (612)
T KOG0603|consen  393 LVMELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-  469 (612)
T ss_pred             eeehhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence            99999996 56666665442 33 7888899999999999999999999999999999 68999999999999876443 


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                        ..+.+.|..|.|||++.. ..|+.++||||||++||+||+|+.||........+   ...++.....           
T Consensus       470 --~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei---~~~i~~~~~s-----------  532 (612)
T KOG0603|consen  470 --CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEI---HTRIQMPKFS-----------  532 (612)
T ss_pred             --hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHH---HHhhcCCccc-----------
Confidence              455677888999999974 78999999999999999999999999887665222   2222221111           


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                     ..+|+.+++||.+||+.||.+|+++.+++.||||
T Consensus       533 ---------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  533 ---------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             ---------------cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence                           3569999999999999999999999999999999

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=3.5e-43  Score=322.87  Aligned_cols=254  Identities=27%  Similarity=0.414  Sum_probs=203.1

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      ......||+|+||.||+|.+..++..||+|.+.....  .....+.+|+.+++.++|+||+++++++..++..|+|+||+
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   87 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV   87 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence            3345689999999999999999999999998764432  22335778999999999999999999999999999999999


Q ss_pred             c-cCHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCCCCCccc
Q 015948           94 E-TDLETVIRNTNIFL--SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        94 ~-g~L~~~~~~~~~~l--~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      . ++|...+......+  ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++...........
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~  167 (268)
T cd06624          88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTE  167 (268)
T ss_pred             CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccc
Confidence            8 58888887654445  88899999999999999999999999999999999976 67999999999987644333333


Q ss_pred             ccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          170 HQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...++..|+|||++.+. ..++.++|+|||||++|+|++|.+||.................                   
T Consensus       168 ~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------  228 (268)
T cd06624         168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK-------------------  228 (268)
T ss_pred             cCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc-------------------
Confidence            44577889999998553 3478999999999999999999999875443221111000000                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                            ....+...+++++.+|+.+||+.+|.+|||+.|++.||||
T Consensus       229 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         229 ------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             ------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence                  0011223457899999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.7e-43  Score=323.25  Aligned_cols=253  Identities=25%  Similarity=0.439  Sum_probs=204.7

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|++.+.||+|+||.||+|++..+++.||||.+..... .......+.+|+.+++.++||||+++++++...+..|+|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            579999999999999999999999999999998865332 2233345678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           91 EFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        91 e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      ||++ |+|..++..   ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~  161 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence            9999 477766642   334589999999999999999999999999999999999999999999999999987754443


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||..... ...+...+...+.+ +            
T Consensus       162 ~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~------------  227 (267)
T cd08228         162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP-P------------  227 (267)
T ss_pred             HHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCC-C------------
Confidence            3344567888999999876 5588999999999999999999988865432 22222221111100 0            


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                  ......+..+.++|.+||..+|++||++.++++
T Consensus       228 ------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         228 ------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             ------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence                        001134688999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.6e-43  Score=328.03  Aligned_cols=260  Identities=27%  Similarity=0.393  Sum_probs=208.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|.+..+|+.||+|++..... ......+.+|+++++.++||||+++++++.....+|+||
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence            3689999999999999999999999999999999875432 333456788999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||++| +|...+.+ .+.+++..+..++.+++.||.|||+ +|++||||||+||+++.++.++|+|||++.......  .
T Consensus        83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--~  159 (284)
T cd06620          83 EFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--A  159 (284)
T ss_pred             ecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--c
Confidence            99995 66666655 4458999999999999999999997 699999999999999999999999999987653222  2


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH----HHH---HHHHHhCCCCCCCCCCCCC
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID----QLG---KIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~~~---~i~~~~~~~~~~~~~~~~~  241 (397)
                      ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......    ...   ..........+...+    
T Consensus       160 ~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  234 (284)
T cd06620         160 DTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP----  234 (284)
T ss_pred             CccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC----
Confidence            23467888999999876 468899999999999999999999998655421    000   111111000000000    


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                        ...++.++.+||.+||..||.+|||+.|+++|+||...
T Consensus       235 ------------------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         235 ------------------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             ------------------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence                              01246789999999999999999999999999999654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=3.6e-43  Score=330.92  Aligned_cols=258  Identities=28%  Similarity=0.424  Sum_probs=215.3

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ...+.|...+.||+|+||.||+|++..++..||+|++...... ......+.+|+.+++.++|+|++++++++.++...|
T Consensus        22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (317)
T cd06635          22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAW  101 (317)
T ss_pred             CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEE
Confidence            3456689999999999999999999999999999998754322 223345778999999999999999999999999999


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      +||||+.|++.+.+......+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++......   
T Consensus       102 lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~---  178 (317)
T cd06635         102 LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA---  178 (317)
T ss_pred             EEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence            99999999998888766667999999999999999999999999999999999999999999999999998754332   


Q ss_pred             ccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 FTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                       ....++..|+|||++..  ...++.++|+|||||++|+|++|.+||...+....+..+.......              
T Consensus       179 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------------  243 (317)
T cd06635         179 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--------------  243 (317)
T ss_pred             -ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC--------------
Confidence             23457778999999742  2457889999999999999999999988776555555544321100              


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                  ......+..+++||.+||+.+|.+||++.++++|+|+..
T Consensus       244 ------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         244 ------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             ------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence                        001234788999999999999999999999999999854

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3.5e-43  Score=326.50  Aligned_cols=260  Identities=20%  Similarity=0.328  Sum_probs=206.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ..++|.+.+.||+|+||.||+|.++.     .+..||+|.+..... ......+.+|+.+++.++|+||+++++++....
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            35789999999999999999997642     345899998764322 122335678999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEee
Q 015948           85 NLHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLAD  154 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~D  154 (397)
                      ..|+||||+. |+|.+++.+..         ..++...+..++.||+.||.|||++||+||||||+|||++.++.++|+|
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D  162 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD  162 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence            9999999998 68888886532         2346678899999999999999999999999999999999999999999


Q ss_pred             eccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          155 FGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       155 FG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      ||+++.......  ......++..|+|||.+.+ ..++.++|+|||||++|||++ |.+||.+.+..+....+.....  
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~--  239 (288)
T cd05061         163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY--  239 (288)
T ss_pred             CCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--
Confidence            999986533221  1122234566999999876 568899999999999999998 7889988766655544332100  


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc------CCCCCCCC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE------HRYFSSAP  298 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~------hp~~~~~~  298 (397)
                                               .......++.+.+++.+||+.||++|||+.++++      ||||.+..
T Consensus       240 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         240 -------------------------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             -------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence                                     0011234689999999999999999999999986      99998754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=2.6e-43  Score=326.56  Aligned_cols=247  Identities=18%  Similarity=0.177  Sum_probs=199.8

Q ss_pred             cceeee--eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeec----CC
Q 015948           12 DRYLKR--EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPH----KG   84 (397)
Q Consensus        12 ~~y~i~--~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~   84 (397)
                      +++...  ..||+|++|.||+|..  +|+.||||++........ ....+.+|+.+|++++||||+++++++.+    ..
T Consensus        18 ~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~   95 (283)
T PHA02988         18 DDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLP   95 (283)
T ss_pred             HHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCC
Confidence            334444  6789999999999976  688999999876533221 12456689999999999999999999866    45


Q ss_pred             eEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           85 NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        85 ~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      .+++||||+.| +|.+.+.+. ..+++.....++.+++.||.|||+. +++||||||+|||++.++.+||+|||+++...
T Consensus        96 ~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~  174 (283)
T PHA02988         96 RLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS  174 (283)
T ss_pred             ceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence            78999999995 677777654 4589999999999999999999984 99999999999999999999999999998654


Q ss_pred             CCCCcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ...   ...+++..|+|||++.+. ..++.++|||||||++|||++|..||.+.+..+....+.......          
T Consensus       175 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~----------  241 (283)
T PHA02988        175 SPP---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSL----------  241 (283)
T ss_pred             ccc---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC----------
Confidence            322   245677889999998652 468999999999999999999999999887666655554321110          


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                      ......++++++||.+||+.||++|||++++++
T Consensus       242 ----------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        242 ----------------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             ----------------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence                            011234789999999999999999999999985

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=2.7e-43  Score=325.37  Aligned_cols=256  Identities=26%  Similarity=0.409  Sum_probs=211.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+-|.+.+.||+|+||.||+|.+..++..||+|.+...... .....+.+|+.+++.++||||++++++|..+..+|+||
T Consensus         3 ~~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   81 (277)
T cd06641           3 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   81 (277)
T ss_pred             HHhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence            35588899999999999999999999999999987644322 22345778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||++| +|...+..  ..+++..+..++.|++.|+.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus        82 e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06641          82 EYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             EeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence            99985 67766654  3489999999999999999999999999999999999999999999999999987654433334


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||.+.+ ...+.++|+|||||++|+|++|.+||...........+...    .   .             
T Consensus       160 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~---~-------------  218 (277)
T cd06641         160 TFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN----N---P-------------  218 (277)
T ss_pred             cccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC----C---C-------------
Confidence            4567888999999865 45788999999999999999999999876554443332111    0   0             


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                             ..+...++.++.++|.+||..+|.+||++.++++||||...
T Consensus       219 -------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         219 -------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             -------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence                   01122457899999999999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3.8e-43  Score=320.44  Aligned_cols=247  Identities=24%  Similarity=0.338  Sum_probs=203.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||.||++..+ .+..+|+|.+.....   ....+.+|+.+|+.++||||+++++++...+.+|+|||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   79 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM---SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE   79 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc---cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence            56999999999999999999875 456899998764322   23457789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc-c
Q 015948           92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF-T  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~-~  169 (397)
                      |++ |+|.+.+......+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||.++......... .
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05114          80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS  159 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence            998 68888887655568999999999999999999999999999999999999999999999999998654322211 1


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...++..|+|||++.+ ..++.++|+|||||++|+|++ |++||...+..+.+..+........                
T Consensus       160 ~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~----------------  222 (256)
T cd05114         160 GAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR----------------  222 (256)
T ss_pred             CCCCchhhCChhhccc-CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC----------------
Confidence            2233456999999875 568899999999999999999 8999988777666665543211000                


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 ....+..+.+|+.+||..||++||+++++++
T Consensus       223 -----------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         223 -----------PKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             -----------CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                       0123678999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.5e-43  Score=318.32  Aligned_cols=253  Identities=32%  Similarity=0.526  Sum_probs=214.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|.+.+.||+|++|.||++.+..+++.|++|.+............+.+|++++++++|+|++++++++.+++..|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            58999999999999999999999999999999976654334455678999999999999999999999999999999999


Q ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        93 ~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ++| +|.+.+... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.............
T Consensus        81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  159 (254)
T cd06627          81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV  159 (254)
T ss_pred             CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence            985 676666654 569999999999999999999999999999999999999999999999999999876555434455


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      .++..|+|||.+.+ ..++.++|+||||+++|+|++|.+||...+.......+...   .                    
T Consensus       160 ~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---~--------------------  215 (254)
T cd06627         160 VGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD---D--------------------  215 (254)
T ss_pred             ccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc---C--------------------
Confidence            67888999999876 44889999999999999999999999876654444333211   0                    


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                          .......++..+.++|.+||..+|++|||+.+++.||||
T Consensus       216 ----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         216 ----HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             ----CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence                011223457899999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-43  Score=322.31  Aligned_cols=252  Identities=29%  Similarity=0.432  Sum_probs=201.7

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHH-HHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKL-LKELKSPHIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~-l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      +.||+|+||.||+|.+..+|+.||+|++.+..... .....+..|..+ ...++|+||+++++++..++.+|+|+||++|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999999999999999987543211 112233445444 4456899999999999999999999999985


Q ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                       +|..++... ..+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++.....    .....++
T Consensus        82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~  156 (260)
T cd05611          82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGT  156 (260)
T ss_pred             CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCCC
Confidence             777776654 4589999999999999999999999999999999999999999999999999876533    2234567


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      ..|+|||.+.+ ..++.++||||||+++|+|++|.+||...+.......+......     ++                 
T Consensus       157 ~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~-----------------  213 (260)
T cd05611         157 PDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN-----WP-----------------  213 (260)
T ss_pred             cCccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC-----CC-----------------
Confidence            77999999877 44899999999999999999999999887766555544332100     10                 


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHHhcCCCCCCCCC
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRYFSSAPL  299 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~l~hp~~~~~~~  299 (397)
                        ......++.++.++|.+||+.||++||+   ++|++.||||.+..|
T Consensus       214 --~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~  259 (260)
T cd05611         214 --EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW  259 (260)
T ss_pred             --CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence              0112245899999999999999999995   579999999987544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3e-43  Score=320.32  Aligned_cols=244  Identities=23%  Similarity=0.349  Sum_probs=197.0

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cC
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TD   96 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~   96 (397)
                      +.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+++++.++||||+++++++.....+|+||||+. ++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD   79 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence            46999999999999999999999999876432 22233467889999999999999999999999999999999998 57


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc--ccccC
Q 015948           97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT--HQVFA  174 (397)
Q Consensus        97 L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~--~~~~t  174 (397)
                      |.+++......+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||++...........  ....+
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  159 (252)
T cd05084          80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP  159 (252)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence            8888876666689999999999999999999999999999999999999999999999999876533211111  11123


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA  253 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (397)
                      ..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...+.......+......                       
T Consensus       160 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~-----------------------  215 (252)
T cd05084         160 VKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL-----------------------  215 (252)
T ss_pred             eeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC-----------------------
Confidence            45999999866 458899999999999999997 88988766654443333221100                       


Q ss_pred             CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                          ......+..+.+|+.+||..||++|||+.++++
T Consensus       216 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         216 ----PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             ----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                011234789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=4.8e-43  Score=321.65  Aligned_cols=252  Identities=20%  Similarity=0.336  Sum_probs=206.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|.+.+.||+|+||+||+|.+..+   ...||+|.+..... ......+.+|+.+++.++|+||+++++.+..++..|
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM   81 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence            36799999999999999999988654   45799998865432 223345778999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||+. |+|.+++......+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus        82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd05033          82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA  161 (266)
T ss_pred             EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence            9999998 588888877666799999999999999999999999999999999999999999999999999988753222


Q ss_pred             ccc--ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          167 RFT--HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       167 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      ...  ...++..|+|||.+.+ ..++.++|||||||++|+|++ |..||......+....+.......            
T Consensus       162 ~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------  228 (266)
T cd05033         162 TYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP------------  228 (266)
T ss_pred             ceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC------------
Confidence            222  2233467999999876 568899999999999999997 999997776665554443221100            


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                     .....+..+.+|+.+||+.+|++||++.+++++
T Consensus       229 ---------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         229 ---------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             ---------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                           012347899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=4.5e-43  Score=328.95  Aligned_cols=261  Identities=26%  Similarity=0.422  Sum_probs=215.3

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      +..-.+.|...+.||+|+||.||+|++..++..+|+|.+...... ......+.+|+.+++.++|+|++++++++.....
T Consensus        10 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   89 (308)
T cd06634          10 KDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT   89 (308)
T ss_pred             cCCcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCe
Confidence            344567799999999999999999999999999999998754322 2223356789999999999999999999999999


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      .|+||||+.|++...+......+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++...... 
T Consensus        90 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-  168 (308)
T cd06634          90 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-  168 (308)
T ss_pred             eEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence            9999999999998888766667899999999999999999999999999999999999999999999999998875432 


Q ss_pred             CcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 RRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                         ....++..|+|||++.+  ...++.++|||||||++|+|++|..||...+..+....+.....   +          
T Consensus       169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~----------  232 (308)
T cd06634         169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES---P----------  232 (308)
T ss_pred             ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC---C----------
Confidence               23456778999999853  24578899999999999999999999877655444433322100   0          


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                   .......+..+.+||.+||..+|.+||+++++++|+|+...
T Consensus       233 -------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         233 -------------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             -------------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence                         00012347889999999999999999999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=4.3e-43  Score=325.47  Aligned_cols=262  Identities=31%  Similarity=0.480  Sum_probs=219.1

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ....+.|.+.+.||+|+||.||+|.+..++..|++|++.....   ....+.+|+.+++.++|+||+++++.+......|
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   91 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELW   91 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE
Confidence            4467889999999999999999999998999999999875443   3445778999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +|+||++ ++|.+++......++...+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  171 (286)
T cd06614          92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS  171 (286)
T ss_pred             EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence            9999999 588888877654699999999999999999999999999999999999999999999999999876654433


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+.....    ..           
T Consensus       172 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~-----------  235 (286)
T cd06614         172 KRNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI----PP-----------  235 (286)
T ss_pred             hhccccCCcccCCHhHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC----CC-----------
Confidence            3344556778999999876 5689999999999999999999999987766554444322100    00           


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                ......++.++++||.+||+.+|.+||++.++++|+||....
T Consensus       236 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  277 (286)
T cd06614         236 ----------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC  277 (286)
T ss_pred             ----------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence                      001122478999999999999999999999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=9.6e-43  Score=323.38  Aligned_cols=261  Identities=27%  Similarity=0.413  Sum_probs=205.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHLV   89 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~lv   89 (397)
                      ++|+..+.||.|++|.||+|.+..+++.||+|.+...... .....+.+|+++++.++||||++++++|..  .+.+|+|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence            5799999999999999999999999999999998754332 334567889999999999999999998854  4479999


Q ss_pred             EEcccc-CHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           90 FEFMET-DLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        90 ~e~~~g-~L~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |||++| +|.+++.   .....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  159 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL  159 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence            999984 7766543   234558999999999999999999999999999999999999999999999999987653322


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHHHHHhCCCCCCCCCCCC
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-----IDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                        .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.....     .+....+..    ......++. 
T Consensus       160 --~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-  231 (287)
T cd06621         160 --AGTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPELKDE-  231 (287)
T ss_pred             --cccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhhccC-
Confidence              123456777999999866 5688999999999999999999999986622     222211111    000000000 


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                      ...-...++.+.+||.+||..||.+|||+.|+++||||...
T Consensus       232 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         232 ----------------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             ----------------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence                            00001236789999999999999999999999999999653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-46  Score=322.99  Aligned_cols=286  Identities=35%  Similarity=0.632  Sum_probs=231.7

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----eE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NL   86 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----~~   86 (397)
                      .+.+-.+.||.|+||+||.+.|..+|+.||+|++....+.-....++++|+++|..++|.|++..+|..+-..     .+
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            3455678999999999999999999999999998765554444557889999999999999999988765433     46


Q ss_pred             EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC-C
Q 015948           87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP-D  165 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~-~  165 (397)
                      |++.|.+..||...|.... .++.+.++-+++||+.||+|||+.||.||||||.|+|++++..+||||||+|+..... .
T Consensus       133 YV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~  211 (449)
T KOG0664|consen  133 YVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR  211 (449)
T ss_pred             HHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh
Confidence            8899999999988887654 4999999999999999999999999999999999999999999999999999976433 3


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc-
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD-  244 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-  244 (397)
                      ..++..+-|.+|+|||++.|...|+.++||||+|||+.||+.++-+|...+..+++..|...+|++..+....-..-.. 
T Consensus       212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~  291 (449)
T KOG0664|consen  212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN  291 (449)
T ss_pred             hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence            5677788899999999999999999999999999999999999999999999999999999999876542210000000 


Q ss_pred             ccccccccCCCccccCC-----CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFP-----SASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~-----~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      -.-..-...|.+..++.     ....+..+++..+|..||++|++.++++.|++.....
T Consensus       292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR  350 (449)
T ss_pred             HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence            00000111222222222     1235688999999999999999999999999986554

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-44  Score=305.45  Aligned_cols=255  Identities=27%  Similarity=0.367  Sum_probs=199.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----Ce
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----GN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~~   85 (397)
                      .+||+|++.||+|||+-||++++..+++.||+|++.-...  +....+++|++..++++||||++++++.-.+     ..
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~--~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ--EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccch--HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            6899999999999999999999999999999999976552  3345688999999999999999999886433     35


Q ss_pred             EEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           86 LHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      .|++++|.. |+|++.+...   +..+++.++..|+.+|++||++||+..  ++||||||.|||+++.+.++|.|||.++
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            999999987 8899888654   346999999999999999999999999  9999999999999999999999999987


Q ss_pred             eeCCC-----C----CcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015948          160 IFGSP-----D----RRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF  228 (397)
Q Consensus       160 ~~~~~-----~----~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~  228 (397)
                      ...-.     .    ........|..|+|||.+.-  ....+.++|||||||+||+|+.|..||...         .+.-
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~~~G  248 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------YQQG  248 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------hhcC
Confidence            53211     1    01223334667999999743  234688999999999999999999998632         1100


Q ss_pred             CCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      +..         .+.  +.......|.    -+.+|..+.+||..||+.||.+||++.+++.+
T Consensus       249 gSl---------aLA--v~n~q~s~P~----~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  249 GSL---------ALA--VQNAQISIPN----SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             CeE---------EEe--eeccccccCC----CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            000         000  0000000011    12368999999999999999999999999864

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-44  Score=316.40  Aligned_cols=281  Identities=35%  Similarity=0.559  Sum_probs=232.2

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----   84 (397)
                      .+..||.-+..+|.|+- .|..|.|..+++.||+|++........-..++.+|..++..++|+||++++.+|.-..    
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~   92 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE   92 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence            35678999999999998 8889999999999999998766544444556789999999999999999999995443    


Q ss_pred             --eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           85 --NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        85 --~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                        .+|+|||||..+|.+.+...   ++-..++.+++|+++|++|||+.||+||||||+||++..++.+||.|||+|+..+
T Consensus        93 ~~e~y~v~e~m~~nl~~vi~~e---lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen   93 FQEVYLVMELMDANLCQVILME---LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             HHhHHHHHHhhhhHHHHHHHHh---cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence              58999999999999988832   7788999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .. -..+..+.|++|+|||++.+. +|...+||||+||++.||++|...|.|.+..++..++...+|++.++...++...
T Consensus       170 ~~-~~mtpyVvtRyyrapevil~~-~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~  247 (369)
T KOG0665|consen  170 TD-FMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPT  247 (369)
T ss_pred             cc-cccCchhheeeccCchheecc-CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence            43 467788899999999999884 4999999999999999999999999999999999999999998776544332211


Q ss_pred             --------cccccccc------ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          243 --------PDYVEYQY------VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       243 --------~~~~~~~~------~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                              +.+..+.+      ...+......+.-+..+++|+.+||..||++|.+++++|+|||++
T Consensus       248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                    11111000      000111111122346789999999999999999999999999997

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=3.6e-43  Score=330.79  Aligned_cols=251  Identities=22%  Similarity=0.383  Sum_probs=201.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcE----EEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~----~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ..+|++.+.||+|+||+||+|.+..++..    ||+|++.... .......+.+|+.+++.++||||+++++++... ..
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~   83 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   83 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence            46799999999999999999998766654    8999886432 222344677899999999999999999998764 57


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ++|+||+. |+|.+.+.+....++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence            78999998 78999888766668999999999999999999999999999999999999999999999999998765433


Q ss_pred             Ccc--cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 RRF--THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ~~~--~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ...  ....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+. ..+......     +      
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~-----~------  230 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGER-----L------  230 (316)
T ss_pred             cceeccCCccceeecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCC-----C------
Confidence            222  12223557999999976 568999999999999999997 9999987654443 333221100     0      


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                     ...+..+.++.+++.+||..||.+||++.+++.+
T Consensus       231 ---------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         231 ---------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             ---------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                           1112346889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=7.6e-43  Score=319.85  Aligned_cols=249  Identities=22%  Similarity=0.345  Sum_probs=204.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ...|.+.+.||+|+||.||+|.+..+++.||+|.+....   .....+.+|+.+++.++|+||+++++++..++.+++||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   81 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence            356999999999999999999999999999999976432   12335778999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||++ |+|.+.+.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++..........
T Consensus        82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~  161 (263)
T cd05052          82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  161 (263)
T ss_pred             EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence            9997 67888876543 458999999999999999999999999999999999999999999999999998764432211


Q ss_pred             c-ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          169 T-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       169 ~-~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      . ...++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+....+......                
T Consensus       162 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------  224 (263)
T cd05052         162 HAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM----------------  224 (263)
T ss_pred             cCCCCCccccCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC----------------
Confidence            1 1223456999999866 568899999999999999998 99999877655544443221100                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 .....++.++.++|.+||..||++||++.++++
T Consensus       225 -----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         225 -----------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             -----------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                       112345789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=3.5e-43  Score=324.79  Aligned_cols=251  Identities=22%  Similarity=0.348  Sum_probs=205.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.+...... .....+.+|+++|+.++|+||+++++++.....
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            4679999999999999999998753     3578999998654322 234567889999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948           86 LHLVFEFME-TDLETVIRNTN-------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~-------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                      .|+||||++ |+|..++...+             ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+|
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k  162 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK  162 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence            999999998 57888776532             3478899999999999999999999999999999999999999999


Q ss_pred             EeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHh
Q 015948          152 LADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF  228 (397)
Q Consensus       152 l~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~  228 (397)
                      |+|||++........  ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+....
T Consensus       163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05049         163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR  241 (280)
T ss_pred             ECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            999999986533221  1223345677999999976 568999999999999999998 999998877666555544221


Q ss_pred             CCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ..                           .....++..+.+|+.+||..||.+||++.|+++
T Consensus       242 ~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         242 LL---------------------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             cC---------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            10                           111235789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=6.3e-43  Score=322.82  Aligned_cols=253  Identities=21%  Similarity=0.330  Sum_probs=202.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ..++|++.+.||+|+||+||+|.+..     ++..||+|++..... ......+.+|+.+++.++|+||+++++++..+.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   82 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   82 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            57889999999999999999998652     356799998754321 122335778999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEee
Q 015948           85 NLHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLAD  154 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~D  154 (397)
                      ..++||||+. |+|.+++.+..         ..++...+..++.|++.||+|||++|++||||||+|||++.++.++|+|
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d  162 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD  162 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence            9999999998 58888876532         1356788899999999999999999999999999999999999999999


Q ss_pred             eccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          155 FGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       155 FG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      ||+++........  .....++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+.....  
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~--  239 (277)
T cd05062         163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL--  239 (277)
T ss_pred             CCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--
Confidence            9998765332211  112344667999999876 568999999999999999998 7889988766555544432110  


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                               ......++..+.++|.+||+.||++|||+.|++++
T Consensus       240 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         240 -------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             -------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                     01112347889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1e-42  Score=317.78  Aligned_cols=249  Identities=22%  Similarity=0.324  Sum_probs=203.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|.... +..+|+|.+.....   ....+.+|+.+++.++||||+++++++.....+|+||
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT   78 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence            3579999999999999999997653 45699998764322   2245788999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-c
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-F  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-~  168 (397)
                      ||+. |+|.+++......+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.++........ .
T Consensus        79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~  158 (256)
T cd05113          79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS  158 (256)
T ss_pred             EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence            9998 5788888765556899999999999999999999999999999999999999999999999999866433211 1


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ....++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+.......                
T Consensus       159 ~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------  221 (256)
T cd05113         159 VGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY----------------  221 (256)
T ss_pred             CCCccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC----------------
Confidence            12234456999999976 458899999999999999998 999998777665555543321110                


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                 .....+..+.+++.+||..||.+||++.+++.+
T Consensus       222 -----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         222 -----------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             -----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence                       011237899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.9e-42  Score=317.42  Aligned_cols=252  Identities=29%  Similarity=0.494  Sum_probs=206.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||.||+|.+..+|+.||+|.++...... .....+.+|+.++++++|+||++++++|..++..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            68999999999999999999999999999999987543322 23456778999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           91 EFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        91 e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      ||++ |+|..++..   .+..+++..+..++.+|+.||.|||+.|++||||||+||+++.++.++|+|||++..+.....
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~  161 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence            9998 588877754   244589999999999999999999999999999999999999999999999999987654443


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--IDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.....  .+....+.....               
T Consensus       162 ~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------  225 (267)
T cd08224         162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY---------------  225 (267)
T ss_pred             ccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC---------------
Confidence            3444567888999999876 5688999999999999999999999865431  111111111100               


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                               ++  ...+..+..+.++|.+||..+|++|||+.++++
T Consensus       226 ---------~~--~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         226 ---------PP--LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             ---------CC--CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                     00  001144789999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=7.8e-43  Score=324.17  Aligned_cols=250  Identities=22%  Similarity=0.359  Sum_probs=203.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|.+.+.||+|+||+||++.+.     .++..+|+|.+....  ......+.+|+.++++++|+||+++++++...+.
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   81 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence            467999999999999999999753     345679999886432  2223457789999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEE
Q 015948           86 LHLVFEFME-TDLETVIRNTN------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKL  152 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl  152 (397)
                      +|+||||++ |+|.+++....            ..+++..+..++.||+.||+|||++|++||||||+|||++.++.+||
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence            999999998 68888876543            24899999999999999999999999999999999999999999999


Q ss_pred             eeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhC
Q 015948          153 ADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFG  229 (397)
Q Consensus       153 ~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~  229 (397)
                      +|||+++.......  ......++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||...+..+.+..+.....
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~  240 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV  240 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Confidence            99999986543221  1223344667999999876 568999999999999999998 9999988776666555543210


Q ss_pred             CCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .                           ......+.++.+|+.+||+.||.+|||+.+++.
T Consensus       241 ~---------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         241 L---------------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             C---------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            0                           011234789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=6.2e-43  Score=325.47  Aligned_cols=258  Identities=25%  Similarity=0.428  Sum_probs=210.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ..|.....||+|+||.||++.+..++..||+|++.....  .....+.+|+.+++.++|+||+++++.|..+++.|+|||
T Consensus        20 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   97 (292)
T cd06657          20 TYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME   97 (292)
T ss_pred             HHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch--hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEe
Confidence            344445789999999999999999999999998754322  234457789999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |+++ +|...+..  ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++............
T Consensus        98 ~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~  175 (292)
T cd06657          98 FLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  175 (292)
T ss_pred             cCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccc
Confidence            9986 55554433  34899999999999999999999999999999999999999999999999998766443333344


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      ..++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.........+.....    ..+              
T Consensus       176 ~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~--------------  236 (292)
T cd06657         176 LVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP----PKL--------------  236 (292)
T ss_pred             cccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC----ccc--------------
Confidence            567888999999865 4578899999999999999999999987766555444332211    000              


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                             .....++..+.+++.+||+.||.+||++.++++||||.....
T Consensus       237 -------~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         237 -------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             -------CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence                   111245789999999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=2.8e-43  Score=333.23  Aligned_cols=278  Identities=21%  Similarity=0.260  Sum_probs=204.7

Q ss_pred             eeeeeec--CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948           17 REVLGEG--TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        17 ~~~LG~G--~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      ...||+|  +||+||+|++..+|+.||+|++............+.+|+.+++.++||||++++++|..++..|+||||+.
T Consensus         3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            3566776  99999999999999999999987654433334567789999999999999999999999999999999998


Q ss_pred             -cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-----
Q 015948           95 -TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-----  167 (397)
Q Consensus        95 -g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-----  167 (397)
                       |++..++.+. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++++|||.+.........     
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (328)
T cd08226          83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY  162 (328)
T ss_pred             CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence             5787777654 234899999999999999999999999999999999999999999999999865433211110     


Q ss_pred             --ccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          168 --FTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       168 --~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                        .....++..|+|||++.+. ..++.++|||||||++|+|++|.+||.+......+...+....   ...+ +....+.
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~  238 (328)
T cd08226         163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPP---YSPL-DITTFPC  238 (328)
T ss_pred             cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCC---CCCc-cccccch
Confidence              0112234559999998753 3478999999999999999999999988765554443332111   0000 0000000


Q ss_pred             cc-cc---------------------ccccCCCc-cccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          245 YV-EY---------------------QYVAAPPL-RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       245 ~~-~~---------------------~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      .. ..                     .......+ .......++.+++||.+||..||++|||+.|+|+||||....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~  315 (328)
T cd08226         239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK  315 (328)
T ss_pred             hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence            00 00                     00000000 011223578899999999999999999999999999997643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.1e-43  Score=318.06  Aligned_cols=248  Identities=21%  Similarity=0.300  Sum_probs=203.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|.+.....   ....+.+|+.+++.++|+||+++++++...+..|+|||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE   79 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence            46899999999999999999875 567899998764322   22356789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc-
Q 015948           92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT-  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~-  169 (397)
                      |++ ++|.+++......+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||+++.......... 
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (256)
T cd05059          80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ  159 (256)
T ss_pred             cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence            997 578888876655789999999999999999999999999999999999999999999999999987643221111 


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...++..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...++.+....+...+..                  
T Consensus       160 ~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------------------  220 (256)
T cd05059         160 GTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL------------------  220 (256)
T ss_pred             CCCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC------------------
Confidence            1122346999999876 568899999999999999998 89999887766655554332111                  


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                               ......+..+.+++.+||..+|++|||+.++++.
T Consensus       221 ---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         221 ---------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             ---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence                     0112347899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=7.2e-43  Score=356.98  Aligned_cols=253  Identities=24%  Similarity=0.328  Sum_probs=200.6

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|++.+.||+|+||.||+|++..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+++..|+||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            6899999999999999999999999999999998754322 223446788999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           91 EFMET-DLETVIRNT----------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        91 e~~~g-~L~~~~~~~----------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      ||++| +|.+.+...          ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||+++
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence            99984 777776532          1235567788999999999999999999999999999999999999999999998


Q ss_pred             eeCCCC------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015948          160 IFGSPD------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL  221 (397)
Q Consensus       160 ~~~~~~------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~  221 (397)
                      ......                  ......+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.........
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~  240 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS  240 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence            762111                  11123468999999999976 56899999999999999999999999875433221


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          222 GKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       222 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ...  ..  ..+..                     ......+++.+.+++.+||..||++|++..+.+.
T Consensus       241 ~~~--~i--~~P~~---------------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        241 YRD--VI--LSPIE---------------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhh--hc--cChhh---------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            110  00  00000                     0111345789999999999999999988766553

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=3.5e-43  Score=324.41  Aligned_cols=253  Identities=32%  Similarity=0.508  Sum_probs=213.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ++|.+.+.||+|+||.||+|.+..+|..||+|++.+... .......+.+|+.+++++. |+||+++++.+.+++..|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            479999999999999999999999999999999876432 2222345678999999998 99999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC---
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---  165 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---  165 (397)
                      |||+. ++|.+.+.+.. .+++..++.++.|++.||.|||++|++|+||+|+||+++.+|.++|+|||++.......   
T Consensus        81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~  159 (280)
T cd05581          81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE  159 (280)
T ss_pred             EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence            99996 68888887654 59999999999999999999999999999999999999999999999999998764432   


Q ss_pred             -----------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015948          166 -----------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF  228 (397)
Q Consensus       166 -----------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~  228 (397)
                                       .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+....+..+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  238 (280)
T cd05581         160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE  238 (280)
T ss_pred             cCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC
Confidence                             12223456778999999876 458889999999999999999999999887655554443210


Q ss_pred             CCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCC
Q 015948          229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYF  294 (397)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~  294 (397)
                                                  ..+...+++.+.+||.+||+.||.+||++    +++++||||
T Consensus       239 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         239 ----------------------------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             ----------------------------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence                                        01223447899999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-42  Score=316.62  Aligned_cols=254  Identities=26%  Similarity=0.462  Sum_probs=206.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---cCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNL   86 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~   86 (397)
                      .+|.+.+.||+|+||.||+|.+..+++.||+|.+.....   .......+.+|+.+++.++|+||+++++++.+.  +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            579999999999999999999999999999998864321   122234567899999999999999999998653  568


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ++|+||++| +|.+.+...+ .+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||+++......
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  160 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC  160 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence            999999985 7777776544 48999999999999999999999999999999999999999999999999998653211


Q ss_pred             ---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                         .......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||..........++.   .....         
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~---------  227 (264)
T cd06653         161 MSGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA---TQPTK---------  227 (264)
T ss_pred             ccCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH---cCCCC---------
Confidence               12233557888999999976 557899999999999999999999998765444333322   11111         


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                    ..+...+++.+.++|.+||+ +|.+||++.+++.|||.
T Consensus       228 --------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         228 --------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             --------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence                          12234568999999999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=5.7e-43  Score=320.04  Aligned_cols=249  Identities=21%  Similarity=0.346  Sum_probs=207.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||+||+|.+.. +..+|+|++.....  .....+.+|+.+++.++|+||+++++++.+....|+||
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence            4679999999999999999999887 88999999865432  12335678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||++ |+|.+++.+. +..++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++..........
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~  161 (261)
T cd05148          82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS  161 (261)
T ss_pred             eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence            9998 5888888764 3458999999999999999999999999999999999999999999999999998765433333


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+......                 
T Consensus       162 ~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------  223 (261)
T cd05148         162 SDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM-----------------  223 (261)
T ss_pred             cCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC-----------------
Confidence            33345567999999866 568899999999999999998 89999887766666655432111                 


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                ......++++.++|.+||+.||.+|||+.++++
T Consensus       224 ----------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         224 ----------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             ----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                      111345789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=1.2e-44  Score=335.99  Aligned_cols=287  Identities=32%  Similarity=0.531  Sum_probs=230.0

Q ss_pred             cccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC------CCeeEEE
Q 015948            4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS------PHIIELI   77 (397)
Q Consensus         4 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~l~   77 (397)
                      +.++..|-.+|.+....|+|-|++|..|.+...|..||||+|+...   ..+..-++|+.||++|+.      -|.++|+
T Consensus       424 v~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~  500 (752)
T KOG0670|consen  424 VRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---VMHKTGLKELEILKKLNDADPEDKFHCLRLF  500 (752)
T ss_pred             EehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch---HHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence            3567788999999999999999999999999999999999998543   233345689999999953      5889999


Q ss_pred             eeeecCCeEEEEEEccccCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEee
Q 015948           78 DAFPHKGNLHLVFEFMETDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLAD  154 (397)
Q Consensus        78 ~~~~~~~~~~lv~e~~~g~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~D  154 (397)
                      -.|.+..++|||||.+.-+|...+++.  +..|....++.|++||+.||..|..+||+|.||||+|||+++. ..+||||
T Consensus       501 r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCD  580 (752)
T KOG0670|consen  501 RHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCD  580 (752)
T ss_pred             HHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeecc
Confidence            999999999999999999999999875  3458889999999999999999999999999999999999976 4599999


Q ss_pred             eccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          155 FGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       155 FG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                      ||.|...+..  ..+.++.+++|+|||+++| ..|++..|+||+||+||||.||+.+|+|.++-+.+...+..-|..+..
T Consensus       581 fGSA~~~~en--eitPYLVSRFYRaPEIiLG-~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~K  657 (752)
T KOG0670|consen  581 FGSASFASEN--EITPYLVSRFYRAPEIILG-LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNK  657 (752)
T ss_pred             Cccccccccc--cccHHHHHHhccCcceeec-CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHH
Confidence            9999876543  4556677888999999998 679999999999999999999999999999999999888877754432


Q ss_pred             CCCCCC----CCcc-----ccccccccC----------CCcccc------CCCC-------CHHHHHHHHHhcCcCCCCC
Q 015948          235 QWPDLA----YLPD-----YVEYQYVAA----------PPLRSL------FPSA-------SDDALDLLSKMFTYDPKAR  282 (397)
Q Consensus       235 ~~~~~~----~~~~-----~~~~~~~~~----------~~~~~~------~~~~-------s~~~~~li~~~L~~dP~~R  282 (397)
                      -.-.-.    .+..     +.+...+..          .|.+.+      .+.+       -..+++||.+||..||++|
T Consensus       658 mlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KR  737 (752)
T KOG0670|consen  658 MLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKR  737 (752)
T ss_pred             HhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhc
Confidence            111000    0000     000000000          010000      0112       2457899999999999999


Q ss_pred             CCHHHHhcCCCCCC
Q 015948          283 ITAQQALEHRYFSS  296 (397)
Q Consensus       283 ~t~~e~l~hp~~~~  296 (397)
                      .|+.|+|.||||+.
T Consensus       738 it~nqAL~HpFi~~  751 (752)
T KOG0670|consen  738 ITVNQALKHPFITE  751 (752)
T ss_pred             CCHHHHhcCCcccC
Confidence            99999999999974

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=4.2e-43  Score=332.99  Aligned_cols=253  Identities=23%  Similarity=0.371  Sum_probs=199.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec-C
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH-K   83 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~-~   83 (397)
                      .++|++.+.||.|+||.||+|.+..     +++.||+|+++..... .....+.+|+.+++++ +|+||+++++++.. +
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA-SEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH-HHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            4689999999999999999997533     4578999998643321 2233567899999999 89999999998754 4


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcC---------------------------------------------------------
Q 015948           84 GNLHLVFEFME-TDLETVIRNTN---------------------------------------------------------  105 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~---------------------------------------------------------  105 (397)
                      ..++++|||+. |+|.+.+....                                                         
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            67899999998 57877775421                                                         


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cccccccCceeeCh
Q 015948          106 ---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAP  180 (397)
Q Consensus       106 ---~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aP  180 (397)
                         ..++...+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+.....  ......++..|+||
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence               2578899999999999999999999999999999999999999999999999987633221  12233445679999


Q ss_pred             hcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcccc
Q 015948          181 ELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSL  259 (397)
Q Consensus       181 E~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (397)
                      |++.+ ..++.++|||||||++|||++ |.+||.+....+.+...+.....                          ...
T Consensus       245 E~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--------------------------~~~  297 (337)
T cd05054         245 ESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR--------------------------MRA  297 (337)
T ss_pred             HHhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC--------------------------CCC
Confidence            99977 568999999999999999997 99999876544444333221000                          001


Q ss_pred             CCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          260 FPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       260 ~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ....++++.+++.+||+.+|++||++.|+++|
T Consensus       298 ~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         298 PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            12347899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.1e-42  Score=316.90  Aligned_cols=252  Identities=27%  Similarity=0.452  Sum_probs=212.3

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      +|++.+.||.|+||.||++.+..+++.||+|.+............+.+|+.+++.++|+||+++++.+.+....|+||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            58999999999999999999999999999999976554444455677899999999999999999999999999999999


Q ss_pred             ccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           93 MET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        93 ~~g-~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ++| +|...+...   ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++......  ..
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~~  158 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--MA  158 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--Cc
Confidence            984 787777552   345899999999999999999999999999999999999999999999999999876543  23


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ....++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...+.......+....       +            
T Consensus       159 ~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-------~------------  218 (256)
T cd08530         159 KTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-------Y------------  218 (256)
T ss_pred             ccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------C------------
Confidence            34567788999999976 568889999999999999999999998876554433332110       0            


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                              ......++.+++++|.+||..+|.+||++.++++||++
T Consensus       219 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         219 --------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             --------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence                    01112447899999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=3.2e-42  Score=312.41  Aligned_cols=252  Identities=32%  Similarity=0.508  Sum_probs=210.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      .|.+.+.||+|++|.||++.+..++..+++|++.....  .....+.+|+.+++.++|+||+++++.+..+...++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~   78 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF   78 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence            48899999999999999999998999999999876443  2344677899999999999999999999999999999999


Q ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           93 ME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        93 ~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ++ ++|.+.+......+++..+..++.|++.||.+||++|++||||+|+||+++.++.++|+|||.+........ ....
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~  157 (253)
T cd05122          79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTM  157 (253)
T ss_pred             CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-ccce
Confidence            99 577777776645699999999999999999999999999999999999999999999999999987654432 3445


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      .++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+....+..+...    .....+              
T Consensus       158 ~~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~--------------  218 (253)
T cd05122         158 VGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN----GPPGLR--------------  218 (253)
T ss_pred             ecCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc----CCCCcC--------------
Confidence            67778999999876 44889999999999999999999999876544444333221    000000              


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                             ....++..+.++|.+||+.||++|||+.++++|||
T Consensus       219 -------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         219 -------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             -------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence                   00113788999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=7.4e-43  Score=328.25  Aligned_cols=275  Identities=20%  Similarity=0.219  Sum_probs=201.0

Q ss_pred             CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHHHHHH
Q 015948           24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR  102 (397)
Q Consensus        24 ~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~~  102 (397)
                      ++|.||.+++..+++.||||++............+.+|+.+++.++|+||++++++|..++..|++|||++ |+|..++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            44566777777899999999998654444445568899999999999999999999999999999999999 57777776


Q ss_pred             hc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-------cccccccC
Q 015948          103 NT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-------RFTHQVFA  174 (397)
Q Consensus       103 ~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-------~~~~~~~t  174 (397)
                      .. ...+++..+..++.||+.||.|||++||+||||||+||+++.+|.+||+|||.+........       ......++
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKN  171 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccc
Confidence            53 34589999999999999999999999999999999999999999999999999876532221       12234456


Q ss_pred             ceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC--CCCCCCCCCCccc----cc
Q 015948          175 RWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT--PSQWPDLAYLPDY----VE  247 (397)
Q Consensus       175 ~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~----~~  247 (397)
                      ..|+|||++.+. ..++.++|+|||||++|+|++|..||........+...........  ...++........    ..
T Consensus       172 ~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (314)
T cd08216         172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNE  251 (314)
T ss_pred             ccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccccc
Confidence            779999998653 3588999999999999999999999987655443322221110000  0000000000000    00


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ...............++.++.+|+.+||..||++|||++++|+||||....
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         252 HPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             ccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            000000011112223467899999999999999999999999999997543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-42  Score=319.95  Aligned_cols=250  Identities=22%  Similarity=0.286  Sum_probs=199.4

Q ss_pred             eeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe-----
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN-----   85 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~-----   85 (397)
                      |.+.+.||+|+||.||+|....+   +..||+|.+............+.+|+.+++.++|+||+++++.+.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            67889999999999999987643   4789999987544333333467789999999999999999998755443     


Q ss_pred             -EEEEEEccc-cCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           86 -LHLVFEFME-TDLETVIRNT-----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        86 -~~lv~e~~~-g~L~~~~~~~-----~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                       .++||||+. |+|...+...     ...+++..+..++.||+.||.|||++|++||||||+||++++++.+||+|||++
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence             899999998 5777776442     235899999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCCCCccc--ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          159 RIFGSPDRRFT--HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       159 ~~~~~~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      +..........  ...++..|+|||.+.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+.....      
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------  233 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR------  233 (273)
T ss_pred             eeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------
Confidence            87643322111  1223456999999865 568999999999999999998 8899988776665544432110      


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                           .......+.++.+++.+||+.||.+|||+.|++++
T Consensus       234 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         234 ---------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             ---------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                 01123457899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.3e-42  Score=322.92  Aligned_cols=264  Identities=24%  Similarity=0.390  Sum_probs=210.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCcc--CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~   86 (397)
                      .|++.+.||+|+||.||+|++.   .+|..||+|++......  ......+.+|+.+++.+ +|+||+++++.|+.+..+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4899999999999999999874   47899999998754322  22234567899999999 589999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||++ ++|...+... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.......
T Consensus        81 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  159 (290)
T cd05613          81 HLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE  159 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence            99999999 5787777654 458999999999999999999999999999999999999999999999999998764332


Q ss_pred             C-cccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 R-RFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~-~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . ......++..|+|||.+.+. ..++.++|||||||++|+|++|..||...........+........+          
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~----------  229 (290)
T cd05613         160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP----------  229 (290)
T ss_pred             ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC----------
Confidence            1 22345678889999998653 34678999999999999999999999754433222222222111100          


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~~  301 (397)
                                    .....++..+.+|+.+||+.||++|+     ++++++.||||....+..
T Consensus       230 --------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~  278 (290)
T cd05613         230 --------------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDD  278 (290)
T ss_pred             --------------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHH
Confidence                          11123578999999999999999997     899999999998876533

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=4.3e-42  Score=312.81  Aligned_cols=255  Identities=29%  Similarity=0.531  Sum_probs=212.0

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHLVF   90 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~lv~   90 (397)
                      +|.+.+.||+|++|.||+|.+..+++.|++|++............+.+|+.++++++|+||+++++.+...  ..+++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            58899999999999999999999999999999876654334455678899999999999999999999888  8999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--c
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--R  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~  167 (397)
                      ||+. ++|.+++.+.. .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+........  .
T Consensus        81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  159 (260)
T cd06606          81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG  159 (260)
T ss_pred             EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence            9996 57777776654 699999999999999999999999999999999999999999999999999988755432  1


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||....+...  .+.....                  
T Consensus       160 ~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~------------------  218 (260)
T cd06606         160 TGSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGS------------------  218 (260)
T ss_pred             ccCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccc------------------
Confidence            344567778999999876 4488999999999999999999999987762221  1111100                  


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                           ......+...++..+.+||.+||..||.+||++.+++.||||
T Consensus       219 -----~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         219 -----SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             -----cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence                 001112223447899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.9e-42  Score=316.72  Aligned_cols=248  Identities=20%  Similarity=0.343  Sum_probs=203.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.++||+|+||.||+|.+. .+..||+|.+.....   ....+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence            578999999999999999999864 567799998754322   2346778999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-  167 (397)
                      ||+. |+|.+++... ...++...+..++.||+.||+|||++|++||||||+||+++.++.++|+|||++......... 
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05072          81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA  160 (261)
T ss_pred             ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence            9997 6888887653 455889999999999999999999999999999999999999999999999999876443221 


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+....+......                
T Consensus       161 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----------------  223 (261)
T cd05072         161 REGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM----------------  223 (261)
T ss_pred             cCCCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence            122234567999999876 558889999999999999998 99999887766655554322110                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 .....++.++.+++.+||..+|++||+++++++
T Consensus       224 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         224 -----------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             -----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                       111235789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1e-42  Score=319.41  Aligned_cols=254  Identities=25%  Similarity=0.450  Sum_probs=204.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      ++|.+.+.||+|+||.||+|++..++..||||.+...... ......+.+|+.+++.++|+||++++++|..++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            5799999999999999999999999999999988754322 223345778999999999999999999999999999999


Q ss_pred             Ecccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           91 EFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        91 e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      ||++| +|.+++..   ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence            99985 77777653   244589999999999999999999999999999999999999999999999999987654443


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.....  ..+...+....   ++         
T Consensus       162 ~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~---~~---------  226 (267)
T cd08229         162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL--YSLCKKIEQCD---YP---------  226 (267)
T ss_pred             ccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCCcccccchH--HHHhhhhhcCC---CC---------
Confidence            3344567888999999866 568889999999999999999999987553221  11111111000   00         


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                              +  ......+..+.+||.+||..||.+|||+.++++
T Consensus       227 --------~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         227 --------P--LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             --------C--CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence                    0  001234789999999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-42  Score=315.90  Aligned_cols=245  Identities=28%  Similarity=0.428  Sum_probs=205.7

Q ss_pred             eeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948           18 EVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      +.||+|+||.||+|.+...   +..|++|.+....... ....+.+|+.+++.++|+||+++++++..+..+++||||+.
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME   79 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence            4799999999999998866   8899999987654433 34567789999999999999999999999999999999996


Q ss_pred             -cCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           95 -TDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        95 -g~L~~~~~~~--------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                       |+|.+.+...        ...+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||.+.......
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  159 (262)
T cd00192          80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD  159 (262)
T ss_pred             CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence             6888888776        4679999999999999999999999999999999999999999999999999998765432


Q ss_pred             --CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 --RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 --~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                        .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||...+..+....+.....             
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------------  225 (262)
T cd00192         160 YYRKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR-------------  225 (262)
T ss_pred             ccccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------
Confidence              22334556778999999876 468999999999999999998 6999988876665555433100             


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                    ......++.++.+++.+||..||++||++.|++++
T Consensus       226 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         226 --------------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             --------------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence                          01123447899999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=6.3e-43  Score=319.82  Aligned_cols=251  Identities=32%  Similarity=0.546  Sum_probs=207.3

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-CH
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL   97 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g-~L   97 (397)
                      ||.|+||.||+|++..+|+.|++|++...... ......+.+|+.++++++|+||+++++.+..+...|+|+||+.| +|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            68999999999999999999999998654321 23344677899999999999999999999999999999999985 77


Q ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--------ccc
Q 015948           98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--------RFT  169 (397)
Q Consensus        98 ~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--------~~~  169 (397)
                      ..++.+.+ .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........        ...
T Consensus        81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  159 (265)
T cd05579          81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK  159 (265)
T ss_pred             HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence            77776644 689999999999999999999999999999999999999999999999999876543311        233


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...++..|+|||.+.+ ..++.++|+|||||++|+|++|..||......+....+...  .   ..++.           
T Consensus       160 ~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~---~~~~~-----------  222 (265)
T cd05579         160 RIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG--K---IEWPE-----------  222 (265)
T ss_pred             CcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--C---cCCCc-----------
Confidence            4556778999999876 44889999999999999999999999877766555444321  0   01110           


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH---HHHhcCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA---QQALEHRYFSSAP  298 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~---~e~l~hp~~~~~~  298 (397)
                                ...++..+.+||.+||+.+|++|||+   .++++||||++..
T Consensus       223 ----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         223 ----------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             ----------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence                      01137899999999999999999999   9999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.2e-42  Score=324.42  Aligned_cols=250  Identities=24%  Similarity=0.343  Sum_probs=199.9

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCc--EEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ++|.+.+.||+|+||.||+|++..++.  .+++|.+.... .......+.+|+.++.++ +||||+++++++...+.+|+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l   80 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI   80 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence            689999999999999999999877765  46888775322 122234577899999999 79999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEE
Q 015948           89 VFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKL  152 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl  152 (397)
                      ||||++ |+|.+++.+..               ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl  160 (297)
T cd05089          81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKI  160 (297)
T ss_pred             EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence            999998 68888886532               24888999999999999999999999999999999999999999999


Q ss_pred             eeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          153 ADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       153 ~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      +|||++....... .......+..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+....+...... 
T Consensus       161 ~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~-  237 (297)
T cd05089         161 ADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM-  237 (297)
T ss_pred             CCcCCCcccccee-ccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC-
Confidence            9999986432111 1111222445999999866 568999999999999999997 99999887766555444221110 


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                                .....++.++.+||.+||..+|.+||+++++++.
T Consensus       238 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         238 --------------------------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             --------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                      1112457899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=9.4e-43  Score=318.52  Aligned_cols=253  Identities=26%  Similarity=0.447  Sum_probs=206.7

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      +|.+.+.||+|+||+||++.+..++..+++|+++....   .......+.+|+.+++.++||||+++++++.+....|+|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            69999999999999999999988877787777654332   222333466799999999999999999999999999999


Q ss_pred             EEcccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           90 FEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |||+.+ +|...+..   ....+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++.......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999985 77766653   3456899999999999999999999999999999999999975 679999999998765444


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      .......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||.+.+.......+....   .             
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~-------------  222 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP---T-------------  222 (260)
T ss_pred             ccccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC---C-------------
Confidence            44444567788999999865 557889999999999999999999998766555444433210   0             


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                 ......++.++.++|.+||..||++||++.++++||||
T Consensus       223 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         223 -----------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             -----------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence                       01122457899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.3e-44  Score=341.25  Aligned_cols=255  Identities=26%  Similarity=0.442  Sum_probs=210.5

Q ss_pred             hcce-eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC--ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe--
Q 015948           11 ADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN--   85 (397)
Q Consensus        11 ~~~y-~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~--   85 (397)
                      .+|| +...+||+|+|-+||+|.|..+|..||.-.++...  +.+...+++..|+.+|+.|+|||||++|++|.+...  
T Consensus        38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~  117 (632)
T KOG0584|consen   38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT  117 (632)
T ss_pred             CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence            4566 55788999999999999999999999977665443  334445788899999999999999999999987655  


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccC-CcEEEeeeccceee
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSH-GQLKLADFGLARIF  161 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~  161 (397)
                      +.+|+|++. |+|..++++. +.++...++.|++||++||.|||++.  |||||||-+||+|+.+ |.|||+|+|+|+..
T Consensus       118 in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~  196 (632)
T KOG0584|consen  118 INFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL  196 (632)
T ss_pred             eeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence            889999998 6676666654 45899999999999999999999996  9999999999999864 89999999999987


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      ..  ....+.+|||.|||||+..  ..|+..+||||||.++.||+|+..|+..=.+ .+++.++..+.....        
T Consensus       197 r~--s~aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s--------  264 (632)
T KOG0584|consen  197 RK--SHAKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA--------  264 (632)
T ss_pred             hc--cccceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH--------
Confidence            44  3345589999999999985  5799999999999999999999998865444 445555544322111        


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                        +..--.+++++||.+||.. .+.|+|+.|+|.||||...
T Consensus       265 ------------------l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  265 ------------------LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             ------------------hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence                              1111268999999999999 9999999999999999864

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-44  Score=328.61  Aligned_cols=265  Identities=29%  Similarity=0.483  Sum_probs=215.6

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-----ccCCccchHHHHHHHHHhcCCCCeeEEEeeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-----QKEGVNFTALREIKLLKELKSPHIIELIDAFP   81 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~   81 (397)
                      ...|.++|.++..||+|||+.||+|.|....++||||+-...+     .++.....+.+|..|.+.|.||-||++||+|.
T Consensus       458 HptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs  537 (775)
T KOG1151|consen  458 HPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS  537 (775)
T ss_pred             CcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee
Confidence            3458999999999999999999999999999999999865543     23344556789999999999999999999995


Q ss_pred             -cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccC---CcEEEeee
Q 015948           82 -HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSH---GQLKLADF  155 (397)
Q Consensus        82 -~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~---~~~kl~DF  155 (397)
                       +.+.+|-|+|||+|+-++++.+++..+++.+++.|+.||+.||.||....  |||-||||.|||+...   |.+||+||
T Consensus       538 lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF  617 (775)
T KOG1151|consen  538 LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF  617 (775)
T ss_pred             eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence             45678999999999766666677778999999999999999999999775  9999999999999643   78999999


Q ss_pred             ccceeeCCCCC-------cccccccCceeeChhcccC---ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHH--H
Q 015948          156 GLARIFGSPDR-------RFTHQVFARWYRAPELLFG---AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQL--G  222 (397)
Q Consensus       156 G~a~~~~~~~~-------~~~~~~~t~~y~aPE~l~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~--~  222 (397)
                      |+++++.....       ......||.||++||.+.-   ....+.++||||+|||||.++.|+.||..+.. .+++  .
T Consensus       618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN  697 (775)
T KOG1151|consen  618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN  697 (775)
T ss_pred             chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence            99998765432       2345668999999999743   23468999999999999999999999976532 2222  1


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      .|++.                     ..+..|+    -|.+|.++++||++||++--++|....++-.||||..
T Consensus       698 TIlkA---------------------tEVqFP~----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  698 TILKA---------------------TEVQFPP----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             chhcc---------------------eeccCCC----CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            22221                     1111111    1456999999999999999999999999999999853

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=1.1e-42  Score=325.46  Aligned_cols=251  Identities=25%  Similarity=0.361  Sum_probs=199.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcE--EEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT--VAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~--~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|.+.+.||+|+||.||+|.+..++..  +|+|.+.... .......+.+|+.++.++ +|+||+++++++.+++.+|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            56899999999999999999998877765  4666654321 122334567899999999 8999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948           88 LVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                      +||||++ |+|.+++.+..               ..+++..++.++.||+.||+|||++|++||||||+|||++.++.+|
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~k  164 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK  164 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEE
Confidence            9999998 68888886542               2478999999999999999999999999999999999999999999


Q ss_pred             EeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCC
Q 015948          152 LADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT  230 (397)
Q Consensus       152 l~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~  230 (397)
                      |+|||++....... ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+..... 
T Consensus       165 l~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-  241 (303)
T cd05088         165 IADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-  241 (303)
T ss_pred             eCccccCcccchhh-hcccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCc-
Confidence            99999986432111 1111223456999998865 568899999999999999998 9999987766554443311100 


Q ss_pred             CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                           +                     ......+.++.+||.+||+.+|++||++++++.+
T Consensus       242 -----~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         242 -----L---------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             -----C---------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 0                     0111347899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=2e-42  Score=334.49  Aligned_cols=252  Identities=21%  Similarity=0.320  Sum_probs=199.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~   84 (397)
                      .++|++.+.||+|+||.||+|.+...     +..||||++..... ......+.+|+++|+.+. ||||+++++++.+.+
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~  114 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG  114 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence            56888999999999999999987433     34799999865432 223346788999999996 999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC----------------------------------------------------------
Q 015948           85 NLHLVFEFME-TDLETVIRNTN----------------------------------------------------------  105 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~----------------------------------------------------------  105 (397)
                      .+|+|||||. |+|.+++.+..                                                          
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (400)
T cd05105         115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI  194 (400)
T ss_pred             ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence            9999999998 68887775421                                                          


Q ss_pred             -------------------------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC
Q 015948          106 -------------------------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG  148 (397)
Q Consensus       106 -------------------------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~  148 (397)
                                                           ..+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~  274 (400)
T cd05105         195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK  274 (400)
T ss_pred             hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC
Confidence                                                 2377888899999999999999999999999999999999999


Q ss_pred             cEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015948          149 QLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIF  225 (397)
Q Consensus       149 ~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~  225 (397)
                      .+||+|||+++.......  ......++..|+|||++.+ ..++.++|||||||++|||++ |..||........+....
T Consensus       275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~  353 (400)
T cd05105         275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI  353 (400)
T ss_pred             EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH
Confidence            999999999987643221  1223345667999999876 568999999999999999996 888887654433332222


Q ss_pred             HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ....  .                        ......++.++.+++.+||+.||++||++.++.+
T Consensus       354 ~~~~--~------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         354 KSGY--R------------------------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             hcCC--C------------------------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            2100  0                        0011245789999999999999999999988865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=3.2e-42  Score=315.59  Aligned_cols=247  Identities=23%  Similarity=0.384  Sum_probs=200.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|.+..+ ..||+|++.....   ....+.+|+++++.++|+||+++++.+. ....|+||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~   79 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT   79 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence            47899999999999999999988655 4699999875332   2235778999999999999999999875 45689999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||++ |+|.+++.+. ...+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.++.........
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~  159 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  159 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence            9998 5888888753 3458899999999999999999999999999999999999999999999999998764433222


Q ss_pred             -cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          169 -THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       169 -~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                       ....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+....+....+......                
T Consensus       160 ~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------------  222 (262)
T cd05071         160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM----------------  222 (262)
T ss_pred             ccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC----------------
Confidence             12334567999999865 558999999999999999999 88999887766655544321100                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 .....++..+.+||.+||+.||++||+++++++
T Consensus       223 -----------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         223 -----------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             -----------CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                       011234788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.9e-42  Score=320.71  Aligned_cols=251  Identities=20%  Similarity=0.314  Sum_probs=202.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEEC----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDT----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      +.|++.+.||+|+||+||+|...    .++..+|+|.+..... ......+.+|+.+++.++||||+++++++..+...|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            57999999999999999999853    3557899999864322 122245678999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948           88 LVFEFME-TDLETVIRNTN----------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~----------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      +||||+. |+|..++....                ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~  163 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHV  163 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcE
Confidence            9999998 58888775321                237888899999999999999999999999999999999999999


Q ss_pred             EEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948          151 KLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA  227 (397)
Q Consensus       151 kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~  227 (397)
                      ||+|||+++......  .......++..|+|||++.+ ..++.++|+|||||++|||++ |.+||.+.+.......+...
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  242 (283)
T cd05090         164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR  242 (283)
T ss_pred             EeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            999999998754322  11223344567999999876 458999999999999999998 99999887665554444321


Q ss_pred             hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ..                           ......+++.+.+++.+||+.||.+||++.+++++
T Consensus       243 ~~---------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         243 QL---------------------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             Cc---------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            00                           01122457899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=1.6e-42  Score=355.24  Aligned_cols=148  Identities=24%  Similarity=0.468  Sum_probs=131.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|.+.+.||+|+||+||+|++..+++.||||+++..... ......+.+|+.+++.++|+||+++++.+....++|+|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            57899999999999999999999999999999999754322 22234567899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      |||+. |+|..++... ..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++
T Consensus        83 mEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99997 5788777654 358999999999999999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=9.5e-44  Score=358.34  Aligned_cols=258  Identities=29%  Similarity=0.471  Sum_probs=205.4

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--------   81 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--------   81 (397)
                      ...+|+.++.||+||||.||+++++-+|+.||||+|.... .......+++|+.+|.+|+|||||+++.+|.        
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~  555 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV  555 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence            4667899999999999999999999999999999998776 5556677899999999999999999885430        


Q ss_pred             ----------------------------------------------------------------------cC--------
Q 015948           82 ----------------------------------------------------------------------HK--------   83 (397)
Q Consensus        82 ----------------------------------------------------------------------~~--------   83 (397)
                                                                                            +.        
T Consensus       556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~  635 (1351)
T KOG1035|consen  556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD  635 (1351)
T ss_pred             ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence                                                                                  00        


Q ss_pred             ---------------------------------CeEEEEEEccccCHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHhHh
Q 015948           84 ---------------------------------GNLHLVFEFMETDLETVIRNTNIFL-SPADIKSYMQMTLKGLAFCHK  129 (397)
Q Consensus        84 ---------------------------------~~~~lv~e~~~g~L~~~~~~~~~~l-~~~~~~~~~~qil~aL~~lH~  129 (397)
                                                       ..+||-||||+..++..+...+... ....++.++++|++||.|+|+
T Consensus       636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~  715 (1351)
T KOG1035|consen  636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD  715 (1351)
T ss_pred             cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence                                             1378999999988888777766544 578899999999999999999


Q ss_pred             CCccccCCCCCcEEEccCCcEEEeeeccceee------------------CCCCCcccccccCceeeChhcccCcc--CC
Q 015948          130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF------------------GSPDRRFTHQVFARWYRAPELLFGAK--QY  189 (397)
Q Consensus       130 ~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~------------------~~~~~~~~~~~~t~~y~aPE~l~~~~--~~  189 (397)
                      +|||||||||.||++++++.|||+|||+|+..                  +......+..+||..|+|||++.+..  .|
T Consensus       716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y  795 (1351)
T KOG1035|consen  716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY  795 (1351)
T ss_pred             CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence            99999999999999999999999999999861                  11223567889999999999997766  69


Q ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHH
Q 015948          190 GAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDAL  268 (397)
Q Consensus       190 ~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  268 (397)
                      +.++||||||+|||||+.-   |... .....+..+....   .|.. +                    .++..--+.-.
T Consensus       796 n~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR~g~---iP~~-~--------------------~f~~~~~~~e~  848 (1351)
T KOG1035|consen  796 NSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLRKGS---IPEP-A--------------------DFFDPEHPEEA  848 (1351)
T ss_pred             cchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcccCC---CCCC-c--------------------ccccccchHHH
Confidence            9999999999999999843   4332 2333333322110   0000 0                    11111135677


Q ss_pred             HHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          269 DLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       269 ~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                      .+|..||+.||.+||||.|+|.+.||-
T Consensus       849 slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  849 SLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             HHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            899999999999999999999999985

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5e-44  Score=338.09  Aligned_cols=254  Identities=21%  Similarity=0.307  Sum_probs=209.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..+...+.+.||+|.||+||+|++-   ..||||++..........+.|++|+..+++-+|.||+=+.+++...+. .||
T Consensus       390 p~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi  465 (678)
T KOG0193|consen  390 PPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII  465 (678)
T ss_pred             CHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence            4567889999999999999999775   359999998877766677789999999999999999999999988877 999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC--CCC
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS--PDR  166 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~--~~~  166 (397)
                      ..+|+| +|+.+++.....|.....+.|++||++|+.|||.++|||||||..||++.+++.|||+|||++..-..  ...
T Consensus       466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~  545 (678)
T KOG0193|consen  466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ  545 (678)
T ss_pred             ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence            999998 78888888888899999999999999999999999999999999999999999999999999975322  223


Q ss_pred             cccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ......|...|||||++..  ..+|+..+|||||||++|||++|..||........+..+    |..             
T Consensus       546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV----GrG-------------  608 (678)
T KOG0193|consen  546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV----GRG-------------  608 (678)
T ss_pred             ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe----ccc-------------
Confidence            3444455667999999853  346899999999999999999999999844433322221    111             


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                            +..+.........+.++++|+..|+.+++++||...+||.
T Consensus       609 ------~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  609 ------YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             ------ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence                  1122233344455789999999999999999999999986

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.2e-42  Score=319.56  Aligned_cols=251  Identities=23%  Similarity=0.343  Sum_probs=201.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ..++|++.+.||+|+||+||+|.+..++.    .||+|++..... ......+.+|+.+++.++|+||+++++++.. ..
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~   82 (279)
T cd05109           5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLT-ST   82 (279)
T ss_pred             chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CC
Confidence            36789999999999999999999877776    489998864322 2223457789999999999999999999865 45


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .++++||++ |+|.+.+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~  162 (279)
T cd05109          83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID  162 (279)
T ss_pred             cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence            789999998 7898888776667999999999999999999999999999999999999999999999999999876433


Q ss_pred             CCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 DRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ...  .....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||...........+... ...          
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~----------  230 (279)
T cd05109         163 ETEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG-ERL----------  230 (279)
T ss_pred             cceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CcC----------
Confidence            221  112233566999999876 568999999999999999998 89999766554433322211 000          


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                      ...+..+.++.++|.+||..||++||++.+++.
T Consensus       231 ----------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         231 ----------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             ----------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                            111234789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.3e-42  Score=324.00  Aligned_cols=252  Identities=25%  Similarity=0.360  Sum_probs=201.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-------CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH   82 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~   82 (397)
                      .++|.+.+.||+|+||.||+|++..       ++..+|+|.+..... ......+.+|+.+++.+ +|+||+++++++..
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   95 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            5889999999999999999998643       235799999875422 22234577899999999 79999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                      ++..|+||||++ |+|.+++....               ..++...+..++.||+.||+|||++|++||||||+|||++.
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~  175 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  175 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence            999999999998 68888887642               24788999999999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK  223 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~  223 (397)
                      ++.+||+|||+++........  .....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+....+....
T Consensus       176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~  254 (307)
T cd05098         176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL  254 (307)
T ss_pred             CCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence            999999999999765432211  112223456999999876 558899999999999999998 8899977654443333


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      +....    .                       ......++.++.+||.+||..+|.+||++.+++++
T Consensus       255 ~~~~~----~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         255 LKEGH----R-----------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHcCC----C-----------------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            32110    0                       01122457899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.9e-42  Score=319.71  Aligned_cols=253  Identities=20%  Similarity=0.296  Sum_probs=202.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      -.++|.+.+.||+|+||.||+|.+..     ++..||+|.+..... ......+.+|+.+++.++|+||+++++++.+.+
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFERL   82 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence            35789999999999999999999876     678899998754322 122345778999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cEEEee
Q 015948           85 NLHLVFEFME-TDLETVIRNTN------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLAD  154 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~kl~D  154 (397)
                      ..|+||||+. |+|.+++....      ..+++..+..++.||+.||.|||++|++||||||+|||++.++   .+||+|
T Consensus        83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d  162 (277)
T cd05036          83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD  162 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence            9999999997 58888876643      2488999999999999999999999999999999999998765   599999


Q ss_pred             eccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          155 FGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       155 FG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      ||+++........  ......+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+....   
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---  238 (277)
T cd05036         163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG---  238 (277)
T ss_pred             CccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC---
Confidence            9999876322211  112223456999999976 458999999999999999996 999998776655444332210   


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .   +                     .....++..+.+++.+||+.||++||++.++++|
T Consensus       239 ~---~---------------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         239 R---L---------------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             c---C---------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            0   0                     1123457899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=2.4e-42  Score=322.15  Aligned_cols=259  Identities=24%  Similarity=0.360  Sum_probs=209.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|.+.+.||+|+||.||+|.+..+++.||||.+....... ....+.+|+.++..+ .|+||+++++++..+..+|+|
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            578999999999999999999999899999999987543222 233456677766666 499999999999999999999


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||+++.+..++......+++..+..++.||+.||.|||+ +||+||||+|+||+++.++.+||+|||++..+..... .
T Consensus        93 ~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-~  171 (296)
T cd06618          93 MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-K  171 (296)
T ss_pred             eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-c
Confidence            9999998888877766679999999999999999999997 5999999999999999999999999999976643322 2


Q ss_pred             cccccCceeeChhcccCc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          169 THQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ....++..|+|||.+.+.   ..++.++|||||||++|+|++|+.||..... .+.+..+.....    ..++       
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~-------  240 (296)
T cd06618         172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP----PSLP-------  240 (296)
T ss_pred             cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC----CCCC-------
Confidence            234567789999998653   2478899999999999999999999976432 333433322110    0000       


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                    ....++.++.+||.+||..||.+||++++++.|+||..
T Consensus       241 --------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  278 (296)
T cd06618         241 --------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR  278 (296)
T ss_pred             --------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence                          00134788999999999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.8e-42  Score=316.35  Aligned_cols=242  Identities=22%  Similarity=0.354  Sum_probs=195.0

Q ss_pred             eeeecCcEEEEEEEE--CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-c
Q 015948           19 VLGEGTYGVVYKAID--TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-T   95 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g   95 (397)
                      .||+|+||.||+|.+  ..++..+|+|++............+.+|+.+++.+.|+||+++++++. ....++||||++ |
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            689999999999964  457789999998655433334456778999999999999999999885 456799999999 5


Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc---ccccc
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FTHQV  172 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~---~~~~~  172 (397)
                      +|..++... ..+++..+..++.||+.||+|||++||+||||||.||+++.++.+||+|||++.........   .....
T Consensus        81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05116          81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK  159 (257)
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence            677777654 45899999999999999999999999999999999999999999999999999876543321   12223


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      ++..|+|||.+.+ ..++.++|+|||||++|||++ |.+||.+.+..+....+.....                      
T Consensus       160 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~----------------------  216 (257)
T cd05116         160 WPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER----------------------  216 (257)
T ss_pred             CCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC----------------------
Confidence            3467999999865 568889999999999999997 9999988766555544432100                      


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                           ......++.++.+||.+||+.||++||++++|..
T Consensus       217 -----~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         217 -----MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             -----CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence                 0112345899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.8e-42  Score=318.22  Aligned_cols=251  Identities=23%  Similarity=0.370  Sum_probs=202.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|.+.+.||+|+||.||+|.+...     +..||+|.+..... ......+.+|+.+++.++|+||+++++++.....
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            57899999999999999999987644     37899999754321 1223456789999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeee
Q 015948           86 LHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF  155 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DF  155 (397)
                      .|+||||++ |+|.+++....         ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+||
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df  163 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence            999999998 68888876432         23678899999999999999999999999999999999999999999999


Q ss_pred             ccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCC
Q 015948          156 GLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTAT  232 (397)
Q Consensus       156 G~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~  232 (397)
                      |+++.......  ......++..|+|||.+.+ ..++.++|||||||++|||++ |.+||.+.+..+....+... .   
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~---  238 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG-G---  238 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC-C---
Confidence            99986543321  2233445677999999866 458899999999999999998 99999877665554443311 0   


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .                       .......+.++.+||.+||..+|++|||+.++++
T Consensus       239 ~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         239 H-----------------------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             C-----------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            0                       0111233789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.7e-42  Score=322.47  Aligned_cols=252  Identities=26%  Similarity=0.388  Sum_probs=203.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .++|.+.+.||+|+||.||++.+...     ...+|+|.+..... ......+.+|+.+++.+ +|+||+++++++..++
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            57899999999999999999987643     36899999875432 22234577899999999 8999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC
Q 015948           85 NLHLVFEFME-TDLETVIRNT---------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG  148 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~---------------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~  148 (397)
                      .+|++|||+. |+|..++...               ...+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~  169 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDH  169 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCC
Confidence            9999999998 6888887542               34589999999999999999999999999999999999999999


Q ss_pred             cEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015948          149 QLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIF  225 (397)
Q Consensus       149 ~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~  225 (397)
                      .+||+|||+++........  .....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+....+.
T Consensus       170 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  248 (293)
T cd05053         170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK  248 (293)
T ss_pred             eEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence            9999999999876443211  112223456999999866 568999999999999999997 999998776655544432


Q ss_pred             HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .....                           ......+.++.+|+.+||..||++|||+.+++++
T Consensus       249 ~~~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         249 EGYRM---------------------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             cCCcC---------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            21100                           1112347899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.1e-42  Score=322.13  Aligned_cols=251  Identities=21%  Similarity=0.295  Sum_probs=203.1

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .+|.+.+.||+|+||+||+|.+..+     +..||+|++..... ......+.+|+.+++.++||||+++++++.+.+..
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            4689999999999999999987543     57899999874332 22234567899999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948           87 HLVFEFME-TDLETVIRNT---------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~---------------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      ++++||+. ++|..++...               ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus        84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~  163 (283)
T cd05091          84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNV  163 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCce
Confidence            99999998 5777776432               2247888899999999999999999999999999999999999999


Q ss_pred             EEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948          151 KLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA  227 (397)
Q Consensus       151 kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~  227 (397)
                      ||+|||+++.......  ......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||.+....+.+..+...
T Consensus       164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~  242 (283)
T cd05091         164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR  242 (283)
T ss_pred             EecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999886543221  1233445677999999876 458899999999999999997 88999887776666555432


Q ss_pred             hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ...                           ......+..+.+|+.+||+.+|.+||++++++..
T Consensus       243 ~~~---------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         243 QVL---------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CcC---------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            110                           1123457889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.4e-42  Score=313.77  Aligned_cols=248  Identities=22%  Similarity=0.364  Sum_probs=203.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|++|.||+|.+. +++.||+|.++....   ....+.+|+.++++++|+||+++++++...+.+|+||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            467999999999999999999875 457899999865432   2335778999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||+. ++|.+.+.... ..++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA  160 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence            9996 68888887653 458999999999999999999999999999999999999999999999999998775322111


Q ss_pred             -cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          169 -THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       169 -~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                       .....+..|+|||.+.+ ..++.++|+|||||++|+|++ |+.||.+......+..+......                
T Consensus       161 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------  223 (261)
T cd05068         161 REGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM----------------  223 (261)
T ss_pred             cCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence             11112346999999876 568899999999999999998 99999887766655554322110                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 ......+..+.+++.+||+.+|.+||++.++++
T Consensus       224 -----------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         224 -----------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             -----------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                       011234789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=2.2e-42  Score=318.07  Aligned_cols=250  Identities=20%  Similarity=0.292  Sum_probs=197.9

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCc--EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec------CCe
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------KGN   85 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------~~~   85 (397)
                      |.+.+.||+|+||.||+|.+..++.  .+|+|.+............+.+|+.+++.++|+||+++++++..      ...
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            4578899999999999999877765  69999887654333344567789999999999999999987632      125


Q ss_pred             EEEEEEccc-cCHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           86 LHLVFEFME-TDLETVIRN-----TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~-----~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      .+++|||+. |+|...+..     ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  160 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK  160 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence            789999998 678776643     22348899999999999999999999999999999999999999999999999998


Q ss_pred             eeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          160 IFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       160 ~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ........  .....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||.+....+....+...-.       
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-------  232 (272)
T cd05075         161 KIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR-------  232 (272)
T ss_pred             ccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC-------
Confidence            76433221  122234567999999876 568999999999999999998 8899988766555444432100       


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                          ....+.++..+.++|.+||+.||++|||+.+++++
T Consensus       233 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         233 --------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             --------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                                01123457889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=2.8e-42  Score=316.84  Aligned_cols=251  Identities=21%  Similarity=0.326  Sum_probs=204.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|++.+.||+|+||.||+|.+..++.   .+|+|.+..... ......+.+|+.+++.++||||+++++++.+++.+|
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            4679999999999999999998865543   799998865332 222346778999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||++ |+|..++......++...+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++........
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd05066          82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  161 (267)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence            9999998 578888877666789999999999999999999999999999999999999999999999999987644322


Q ss_pred             cc---cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 RF---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ~~---~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ..   ....++..|+|||.+.+ ..++.++|+|||||++|+|++ |..||...+..+....+......            
T Consensus       162 ~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~------------  228 (267)
T cd05066         162 AAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL------------  228 (267)
T ss_pred             eeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC------------
Confidence            11   11222456999999976 568999999999999999886 99999877665554444322110            


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                     .....++..+.+++.+||+.+|.+||++.++++
T Consensus       229 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         229 ---------------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             ---------------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence                           011234789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=5.6e-42  Score=313.48  Aligned_cols=248  Identities=21%  Similarity=0.354  Sum_probs=201.4

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|++.+.||+|+||.||+|.+. .+..+|+|.+......   ...+.+|+.++++++|+||+++++++. ....|++
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv   78 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV   78 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence            3578999999999999999999765 5677999998754332   245789999999999999999999885 4568999


Q ss_pred             EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||+. ++|.+.+... ...+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++.........
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05070          79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence            99998 5888887654 345899999999999999999999999999999999999999999999999999876443221


Q ss_pred             -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                       .....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+.+..+....+......               
T Consensus       159 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------------  222 (260)
T cd05070         159 ARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM---------------  222 (260)
T ss_pred             cccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence             112234556999999865 558899999999999999998 89999887766655554322110               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                  ......+..+.+|+.+||..||++|||++++++
T Consensus       223 ------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         223 ------------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             ------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence                        111234789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=4.9e-42  Score=319.80  Aligned_cols=258  Identities=23%  Similarity=0.298  Sum_probs=205.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC----------------cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG----------------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII   74 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~----------------~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv   74 (397)
                      .++|++.+.||+|+||.||+|.+..++                ..||+|.+...... .....+.+|+.+++.++||||+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~   82 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDPNIA   82 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCCCEe
Confidence            468999999999999999999876544                45899988754332 2334567899999999999999


Q ss_pred             EEEeeeecCCeEEEEEEccc-cCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948           75 ELIDAFPHKGNLHLVFEFME-TDLETVIRNTN----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL  143 (397)
Q Consensus        75 ~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~----------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL  143 (397)
                      ++++++..++.+++||||+. ++|..++....          ..+++..++.++.|++.||+|||++||+||||||+||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil  162 (296)
T cd05051          83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL  162 (296)
T ss_pred             EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence            99999999999999999998 57888776543          25899999999999999999999999999999999999


Q ss_pred             EccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh--CCCCCCCCCcHH
Q 015948          144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDID  219 (397)
Q Consensus       144 l~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~  219 (397)
                      ++.++.++|+|||+++.......  ......++..|+|||++.+ ..++.++|||||||++|||++  |..||...+..+
T Consensus       163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05051         163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ  241 (296)
T ss_pred             ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence            99999999999999986543321  1223445667999999876 458999999999999999997  678887766666


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .+..+...+.....                    .......+.++.++.+||.+||+.||.+|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         242 VIENAGHFFRDDGR--------------------QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHHHhccccccc--------------------cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            55554332211100                    0001112345789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=6.9e-42  Score=312.87  Aligned_cols=248  Identities=22%  Similarity=0.366  Sum_probs=202.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|++.++||+|+||.||+|... +++.||+|.+.....   ....+.+|+.+++.++|+||+++++.+. .+.+|+|
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v   78 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII   78 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence            4678999999999999999999864 578899999864332   2346778999999999999999999874 5678999


Q ss_pred             EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      |||+. |+|.+.+... +..++...+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++........ 
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence            99997 6888887653 34689999999999999999999999999999999999999999999999999987652221 


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+......               
T Consensus       159 ~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------------  222 (260)
T cd05067         159 AREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM---------------  222 (260)
T ss_pred             cccCCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC---------------
Confidence            1122334567999999866 558899999999999999998 99999887766655554322111               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                  ......+.++.++|.+||..+|++||+++++++
T Consensus       223 ------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         223 ------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             ------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                        111234789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=7.2e-42  Score=314.08  Aligned_cols=251  Identities=21%  Similarity=0.338  Sum_probs=203.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|...+.||+|+||.||+|++..++.   .+|+|.+..... ......+.+|+.+++.++|+||+++++++...+..|
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM   82 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence            4579999999999999999999876655   799998864322 222345778999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||++ ++|..++......+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++........
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  162 (268)
T cd05063          83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE  162 (268)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence            9999998 578788776666789999999999999999999999999999999999999999999999999987643222


Q ss_pred             ccc---ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 RFT---HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ~~~---~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ...   ....+..|+|||++.+ ..++.++|||||||++|||++ |..||...+..+....+......+.          
T Consensus       163 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~----------  231 (268)
T cd05063         163 GTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPA----------  231 (268)
T ss_pred             cceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCC----------
Confidence            111   1112346999999876 568899999999999999997 9999987776665555533211000          


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                       ....+.++.+|+.+||+.+|++||++.++++
T Consensus       232 -----------------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         232 -----------------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             -----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                             1123688999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=7.2e-42  Score=319.88  Aligned_cols=254  Identities=24%  Similarity=0.339  Sum_probs=203.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH   82 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~   82 (397)
                      ...++|.+.+.||+|+||.||+|.+     ..++..||+|+++.... ......+.+|+.+++++ +|+||+++++++..
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  110 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTI  110 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence            3467899999999999999999975     23456899998865432 22234577899999999 79999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      .+.+|+||||+. |+|..++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++.
T Consensus       111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence            999999999998 68888886543 3489999999999999999999999999999999999999999999999999986


Q ss_pred             eCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          161 FGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       161 ~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      ......  ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+....+.......... .      
T Consensus       191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~-~------  262 (302)
T cd05055         191 IMNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY-R------  262 (302)
T ss_pred             ccCCCceeecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC-c------
Confidence            543321  1112334667999999876 458899999999999999998 9999987765554444332100 0      


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                         .......+..+.+|+.+||..+|++|||+.|+++
T Consensus       263 -------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         263 -------------------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                               0011234789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=7.2e-42  Score=316.26  Aligned_cols=250  Identities=21%  Similarity=0.296  Sum_probs=197.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcE----EEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~----~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .++|++.+.||+|+||+||+|.+..++..    +++|.+..... ......+..|+.+++.+.||||+++++++. +...
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~   83 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASL   83 (279)
T ss_pred             HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCcc
Confidence            46899999999999999999998877764    66666542211 112234567888999999999999999875 4567


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ++++||+. |+|.+++......+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence            88999998 79999988776679999999999999999999999999999999999999999999999999998764322


Q ss_pred             C--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 R--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .  ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+........ ++.... ..+         
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~-~~~~~~-~~~---------  231 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPD-LLEKGE-RLA---------  231 (279)
T ss_pred             cccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHCCC-cCC---------
Confidence            2  2223345667999999876 468999999999999999998 999998765443322 222100 000         


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                      .....+.++.+++.+||..||++|||+.|+++
T Consensus       232 ----------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         232 ----------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             ----------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                            00123578899999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=5.2e-42  Score=317.34  Aligned_cols=250  Identities=20%  Similarity=0.333  Sum_probs=202.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ..+|++.++||+|+||.||+|...     .++..+|+|.+....  ......+.+|+++++.++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP   81 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence            578999999999999999999643     346689999876432  2223457789999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948           86 LHLVFEFME-TDLETVIRNTN--------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~--------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      .|+||||+. |+|.+++....              ..+++..+..++.||+.||+|||++|++||||||+|||++.++.+
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE
Confidence            999999998 58888876543              247899999999999999999999999999999999999999999


Q ss_pred             EEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948          151 KLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA  227 (397)
Q Consensus       151 kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~  227 (397)
                      ||+|||+++.......  ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||......+....+...
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  240 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG  240 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC
Confidence            9999999976533221  1122334567999999876 568999999999999999998 89999877666655444322


Q ss_pred             hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ...                           .....+++.+.+||.+||+.||.+||+++++++
T Consensus       241 ~~~---------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         241 REL---------------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             ccC---------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            100                           111245789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-41  Score=311.01  Aligned_cols=249  Identities=22%  Similarity=0.367  Sum_probs=204.8

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|++.+.||+|+||+||+|.+. .+..+|||.+.....   ....+.+|+.+++.++|+||+++++++......|+|
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   79 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV   79 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence            3678999999999999999999875 557899999874332   234577899999999999999999999998999999


Q ss_pred             EEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||++ ++|.+.+.... ..++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus        80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence            99998 58888887643 45899999999999999999999999999999999999999999999999999876432111


Q ss_pred             -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                       ......+..|+|||.+.+ ..++.++|+|||||++|+|++ |+.||.+.+....+..+...+...              
T Consensus       160 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------  224 (261)
T cd05034         160 AREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP--------------  224 (261)
T ss_pred             hhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------
Confidence             111223456999999876 568899999999999999998 999998887776666654322111              


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                   .....+.++.+++.+||..+|++||+++++++
T Consensus       225 -------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         225 -------------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             -------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                         11223688999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.2e-42  Score=311.53  Aligned_cols=242  Identities=21%  Similarity=0.342  Sum_probs=195.1

Q ss_pred             eeeeecCcEEEEEEEECCCC---cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTG---QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      ++||+|+||.||+|....++   ..||+|.+...... .....+.+|+.+++.+.|+||+++++++. ...+++||||+.
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~   78 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP   78 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence            47999999999999876555   78999998755433 23446778999999999999999999875 456899999998


Q ss_pred             -cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc--
Q 015948           95 -TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ--  171 (397)
Q Consensus        95 -g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~--  171 (397)
                       |+|.+++.... .+++..+..++.|++.||+|||++|++|+||||+|||++.++.+||+|||+++............  
T Consensus        79 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          79 LGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             CCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence             58888887654 68999999999999999999999999999999999999999999999999998765433222211  


Q ss_pred             -ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          172 -VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       172 -~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                       .++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+......                   
T Consensus       158 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------  217 (257)
T cd05060         158 GRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL-------------------  217 (257)
T ss_pred             ccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC-------------------
Confidence             12346999999866 568999999999999999997 99999877665544443221000                   


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                              .....++..++++|.+||..||++||++.++++
T Consensus       218 --------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         218 --------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             --------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                    111234789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=7.2e-42  Score=318.13  Aligned_cols=250  Identities=22%  Similarity=0.344  Sum_probs=202.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ..+|.+.+.||+|+||.||+|.+.     .++..+++|.+.....  .....+.+|+.+++.++|+||+++++++.....
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQHEHIVKFYGVCGDGDP   81 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH--HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence            456999999999999999999754     3455688888753322  112356789999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc
Q 015948           86 LHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ  149 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~  149 (397)
                      .++||||++ ++|.+++....               ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence            999999998 68888876532               34789999999999999999999999999999999999999999


Q ss_pred             EEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHH
Q 015948          150 LKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA  226 (397)
Q Consensus       150 ~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~  226 (397)
                      ++|+|||++........  ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+..
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  240 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ  240 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence            99999999986543321  2234456778999999876 568899999999999999998 9999987776655544322


Q ss_pred             HhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ..       ++                    ......+..+.+|+.+||+.||.+||++.++++
T Consensus       241 ~~-------~~--------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         241 GR-------VL--------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CC-------CC--------------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            10       00                    011234788999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.1e-41  Score=320.48  Aligned_cols=251  Identities=25%  Similarity=0.364  Sum_probs=201.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-------CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH   82 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~   82 (397)
                      .++|.+.+.||+|+||.||+|++..       ....+|+|.+..... ......+.+|+.+++.+ .||||+++++++..
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            5799999999999999999998642       345799998764322 22234567899999999 69999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                      ++.+|+||||+. |+|.+++....               ..++...+..++.||+.||.|||++|++||||||+|||++.
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~  169 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE  169 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence            999999999998 68888886532               34888999999999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK  223 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~  223 (397)
                      ++.+||+|||+++........  .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+....
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~  248 (314)
T cd05099         170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL  248 (314)
T ss_pred             CCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            999999999999865432211  112223456999999876 568999999999999999998 8899987766555554


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      +.....                           ......++.++++||.+||..||++|||+.++++
T Consensus       249 ~~~~~~---------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         249 LREGHR---------------------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHcCCC---------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            432100                           0112345789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.2e-41  Score=318.58  Aligned_cols=255  Identities=24%  Similarity=0.349  Sum_probs=204.1

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEEC-------CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEee
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDT-------KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDA   79 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~   79 (397)
                      ....++|.+.+.||+|+||.||+|++.       ..+..||+|.+..... ......+.+|+.+++.+ +||||+++++.
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   89 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGA   89 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence            345789999999999999999999753       2345799998764322 22334577899999999 89999999999


Q ss_pred             eecCCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948           80 FPHKGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL  143 (397)
Q Consensus        80 ~~~~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL  143 (397)
                      +...+.+|+||||+. |+|..++.+..               ..++...+..++.||+.||.|||++|++||||||+|||
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil  169 (304)
T cd05101          90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVL  169 (304)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEE
Confidence            999999999999998 58888886532               24778889999999999999999999999999999999


Q ss_pred             EccCCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015948          144 IGSHGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ  220 (397)
Q Consensus       144 l~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~  220 (397)
                      ++.++.+||+|||+++........  .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  248 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  248 (304)
T ss_pred             EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence            999999999999999876443222  222334567999999976 568899999999999999998 7888987766555


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ...+......                           .....++.++++||.+||..+|.+||++.++++.
T Consensus       249 ~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         249 FKLLKEGHRM---------------------------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHHHHcCCcC---------------------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            5444221000                           0112457899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=1.5e-41  Score=316.60  Aligned_cols=267  Identities=13%  Similarity=0.154  Sum_probs=198.9

Q ss_pred             CCccccChhhhcceeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCcc---------chHHHHHHHHHhc
Q 015948            1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVN---------FTALREIKLLKEL   68 (397)
Q Consensus         1 m~~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~---------~~~~~E~~~l~~l   68 (397)
                      |..+.+.....++|.+.+.||+|+||+||+|.+..+   +..+|+|+...........         .....++..+..+
T Consensus         1 ~~~~~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (294)
T PHA02882          1 MEGIPLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI   80 (294)
T ss_pred             CCCeeeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC
Confidence            777888888899999999999999999999998877   6678888654322111000         0112233455667


Q ss_pred             CCCCeeEEEeeeecCC----eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE
Q 015948           69 KSPHIIELIDAFPHKG----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI  144 (397)
Q Consensus        69 ~hp~iv~l~~~~~~~~----~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl  144 (397)
                      .|++|+++++++....    ..|+++|++..++...+... ...++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        81 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill  159 (294)
T PHA02882         81 DHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV  159 (294)
T ss_pred             CCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            8999999998765433    45788998887777666543 236788899999999999999999999999999999999


Q ss_pred             ccCCcEEEeeeccceeeCCCC-------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc
Q 015948          145 GSHGQLKLADFGLARIFGSPD-------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD  217 (397)
Q Consensus       145 ~~~~~~kl~DFG~a~~~~~~~-------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  217 (397)
                      +.++.++|+|||+|+.+....       .......||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.
T Consensus       160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~  238 (294)
T PHA02882        160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESLGYCMLKWAGIKLPWKGFGH  238 (294)
T ss_pred             cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence            999999999999998764322       11223468999999999876 5689999999999999999999999987743


Q ss_pred             -HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          218 -IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       218 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                       ..........+-.....                     .....+..+.++.+++..|+..+|++||+.+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        239 NGNLIHAAKCDFIKRLHE---------------------GKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             chHHHHHhHHHHHHHhhh---------------------hhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence             22222111100000000                     00112344788999999999999999999999875

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=2e-41  Score=309.93  Aligned_cols=247  Identities=23%  Similarity=0.372  Sum_probs=199.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||.||+|.+..+ ..+|+|.+....   .....+.+|+.+++.++|+|++++++++. .+..|+||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT   79 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence            47899999999999999999987654 469999876432   22345778999999999999999999885 45689999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-  167 (397)
                      ||+. |+|.+++... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||+++........ 
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05069          80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence            9998 5888888764 334889999999999999999999999999999999999999999999999999876433211 


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+..+.+....+......                
T Consensus       160 ~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------  222 (260)
T cd05069         160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM----------------  222 (260)
T ss_pred             cCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence            112234566999999866 458899999999999999998 89999887766655544322100                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 ......+..+.+|+.+||..||.+||+++++++
T Consensus       223 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         223 -----------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             -----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                       111234789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.8e-41  Score=309.27  Aligned_cols=248  Identities=24%  Similarity=0.380  Sum_probs=202.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .+|++.+.||+|+||.||+|.+. .+..+|+|.+......   ...+.+|+++++.++||||+++++++......|+|||
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE   79 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence            46999999999999999999875 4678999988643322   2357789999999999999999999999999999999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-cc
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-FT  169 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-~~  169 (397)
                      |+.| +|.+.+......+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......... ..
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (256)
T cd05112          80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST  159 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence            9984 777777766666899999999999999999999999999999999999999999999999999866433211 11


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...++..|+|||++.+ ..++.++|+|||||++|||++ |.+||...........+.......                 
T Consensus       160 ~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------  221 (256)
T cd05112         160 GTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLY-----------------  221 (256)
T ss_pred             CCccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC-----------------
Confidence            2233456999999876 568899999999999999998 999998776665555443211000                 


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                .....+..+.+|+.+||..+|++|||+.+++++
T Consensus       222 ----------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         222 ----------KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             ----------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence                      011237899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1e-41  Score=313.37  Aligned_cols=250  Identities=22%  Similarity=0.344  Sum_probs=202.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..|.+.+.||+|+||.||+|.+..+++   .||||++.... .......+.+|+.+++.++||||+++++++..++.+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l   82 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI   82 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence            569999999999999999999887665   59999986432 22234467789999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||++| +|.+++......+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~  162 (269)
T cd05065          83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD  162 (269)
T ss_pred             EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence            9999985 787777766667899999999999999999999999999999999999999999999999998765432211


Q ss_pred             --cccccc---CceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          168 --FTHQVF---ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       168 --~~~~~~---t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                        .....+   +..|+|||.+.+ ..++.++|||||||++|||++ |..||...+..+....+......           
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~-----------  230 (269)
T cd05065         163 PTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRL-----------  230 (269)
T ss_pred             cccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC-----------
Confidence              111111   346999999865 568999999999999999886 99999877666555544221100           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                      ......+..+.+++.+||..+|.+||++++++.
T Consensus       231 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         231 ----------------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             ----------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                            011234788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.3e-41  Score=310.78  Aligned_cols=242  Identities=21%  Similarity=0.343  Sum_probs=193.9

Q ss_pred             eeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-c
Q 015948           19 VLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-T   95 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g   95 (397)
                      .||+|+||.||+|.+.  ..+..||+|++..... ......+.+|+.++++++|+||+++++.++ ....++||||++ |
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~   79 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG   79 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence            4899999999999765  4456799998865422 223345778999999999999999999885 457899999998 5


Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc---cccc
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---THQV  172 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~---~~~~  172 (397)
                      +|.+.+......+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++..........   ....
T Consensus        80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05115          80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGK  159 (257)
T ss_pred             CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCC
Confidence            7888877656679999999999999999999999999999999999999999999999999998654332211   1122


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      ++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+....+....+.....                      
T Consensus       160 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----------------------  216 (257)
T cd05115         160 WPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR----------------------  216 (257)
T ss_pred             CCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC----------------------
Confidence            2456999999875 558899999999999999996 9999988776665544432210                      


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                           ....+..++++.++|.+||..||++||++.++.+
T Consensus       217 -----~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         217 -----LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 0111344789999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=8.5e-42  Score=317.45  Aligned_cols=249  Identities=24%  Similarity=0.388  Sum_probs=197.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      +|++.+.||+|+||.||+|.+..     ....+++|.+...... .....+.+|+.+++.++||||+++++.+..++..|
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS-SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL   79 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH-HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence            58899999999999999998753     2357888887643322 12345778999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948           88 LVFEFME-TDLETVIRNTN-----------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL  143 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~-----------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL  143 (397)
                      +|+||+. |+|..++....                       ..++...+..++.|++.||.|||++|++||||||+|||
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil  159 (290)
T cd05045          80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL  159 (290)
T ss_pred             EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence            9999999 57777765421                       24788899999999999999999999999999999999


Q ss_pred             EccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015948          144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ  220 (397)
Q Consensus       144 l~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~  220 (397)
                      ++.++.+||+|||+++.......  ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+......
T Consensus       160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  238 (290)
T cd05045         160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL  238 (290)
T ss_pred             EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            99999999999999986533221  1122234557999999866 568999999999999999998 9999987765544


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ...+......                           ......+.++.+|+.+||+.||++||++.++++
T Consensus       239 ~~~~~~~~~~---------------------------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         239 FNLLKTGYRM---------------------------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHHhCCCCC---------------------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            4332211100                           011234789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-41  Score=317.76  Aligned_cols=258  Identities=25%  Similarity=0.327  Sum_probs=201.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC--------------CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT--------------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL   76 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~--------------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l   76 (397)
                      .++|++.+.||+|+||.||+|++..+              ...||+|.++.... ......+.+|++++++++|+||+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            46899999999999999999987543              23589999865422 2223357789999999999999999


Q ss_pred             EeeeecCCeEEEEEEccc-cCHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE
Q 015948           77 IDAFPHKGNLHLVFEFME-TDLETVIRNTN-----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI  144 (397)
Q Consensus        77 ~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~-----------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl  144 (397)
                      ++++...+..|+||||+. ++|.+++....           ..+++..+..++.||+.||.|||++|++||||||+||++
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill  162 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV  162 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence            999999999999999998 57877775432           136788899999999999999999999999999999999


Q ss_pred             ccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh--CCCCCCCCCcHHH
Q 015948          145 GSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQ  220 (397)
Q Consensus       145 ~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~  220 (397)
                      +.++.+||+|||++........  ......++..|+|||++.+ ..++.++|+|||||++|+|++  |..||...+..+.
T Consensus       163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~  241 (295)
T cd05097         163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV  241 (295)
T ss_pred             cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence            9999999999999976533221  1122334567999999876 458999999999999999987  6678887776665


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      +..+...+.......                    .....+..++.+++||.+||+.||++||+++++++
T Consensus       242 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         242 IENTGEFFRNQGRQI--------------------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHHhhhhccccc--------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            555433221100000                    00112234789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-41  Score=309.43  Aligned_cols=243  Identities=24%  Similarity=0.377  Sum_probs=197.6

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cC
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TD   96 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~   96 (397)
                      ++||.|+||.||+|.+.. ++.||+|.+...... .....+.+|+++++.++|+||+++++++.+....|+||||+. ++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            479999999999999887 999999988754332 234467789999999999999999999999999999999997 57


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc--cccccC
Q 015948           97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF--THQVFA  174 (397)
Q Consensus        97 L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~--~~~~~t  174 (397)
                      |.+++.+....+++..+..++.+++.||+|||++|++||||||+|||++.++.+||+|||++..........  .....+
T Consensus        79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (251)
T cd05041          79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP  158 (251)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence            888887766668999999999999999999999999999999999999999999999999998654221111  112224


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA  253 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (397)
                      ..|+|||.+.+ ..++.++|+|||||++|+|++ |..||...........+......                       
T Consensus       159 ~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~-----------------------  214 (251)
T cd05041         159 IKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRM-----------------------  214 (251)
T ss_pred             eccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCC-----------------------
Confidence            45999999866 568999999999999999998 88898877655444433221100                       


Q ss_pred             CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                          ......+..+.+++.+||..+|.+|||+.|+++
T Consensus       215 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         215 ----PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             ----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                011234789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-41  Score=309.25  Aligned_cols=244  Identities=21%  Similarity=0.331  Sum_probs=201.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||.|+||.||+|...  |+.||+|.+.....   ....+.+|+.+++.++|+||+++++++.+....|+||
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   79 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT   79 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence            467999999999999999999764  78999999865433   3446778999999999999999999999899999999


Q ss_pred             Eccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||++ ++|.+++..... .+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.......  
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~--  157 (256)
T cd05039          80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD--  157 (256)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence            9998 588888876542 589999999999999999999999999999999999999999999999999987633221  


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                       ....+..|+|||++.+ ..++.++|+|||||++|+|++ |..||......+....+.....                  
T Consensus       158 -~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------------  217 (256)
T cd05039         158 -SGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR------------------  217 (256)
T ss_pred             -cCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC------------------
Confidence             2233456999999865 468889999999999999997 9999987765544433322100                  


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                               .......++++.++|.+||..+|++||++.++++
T Consensus       218 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         218 ---------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             ---------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                     0111234789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-44  Score=363.39  Aligned_cols=260  Identities=26%  Similarity=0.437  Sum_probs=216.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      +.-++.-..+||.|.||.||.|.+..+|...|+|-+............+.+|.++|..++|||+|++++.-.+.+.++|.
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            45578888999999999999999999999999999987655544444567899999999999999999999999999999


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----  165 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----  165 (397)
                      ||||+|+.+..+...+.-.++...+.|..|++.|+.|||++|||||||||+||+++.+|-+|++|||.|..+....    
T Consensus      1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred             HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence            9999964444444445557888888999999999999999999999999999999999999999999999875543    


Q ss_pred             CcccccccCceeeChhcccCcc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 RRFTHQVFARWYRAPELLFGAK--QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-LGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .......||+.|||||++.+.+  +.+.+.|||||||++.||+||+-||...++.-+ +..+    +..           
T Consensus      1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V----~~g----------- 1457 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV----AAG----------- 1457 (1509)
T ss_pred             HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH----hcc-----------
Confidence            3345778999999999997643  467789999999999999999999986654432 2222    111           


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                  ....++.++|.+.+|||..||..||++|+++.|+++|.|-..
T Consensus      1458 ------------h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1458 ------------HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             ------------CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence                        112233457999999999999999999999999999998654

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=8.3e-42  Score=325.12  Aligned_cols=253  Identities=24%  Similarity=0.387  Sum_probs=196.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec-C
Q 015948           11 ADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH-K   83 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~-~   83 (397)
                      .++|++.+.||+|+||+||+|++     ..+++.||||+++..... .....+.+|+.+|.++ +|+||+++++++.. +
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            47899999999999999999984     356789999998654322 2234577899999999 67999999998754 4


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcC---------------------------------------------------------
Q 015948           84 GNLHLVFEFME-TDLETVIRNTN---------------------------------------------------------  105 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~---------------------------------------------------------  105 (397)
                      ..+|+|||||+ |+|.+++....                                                         
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            56899999998 68887776432                                                         


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cccccccC
Q 015948          106 ---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFA  174 (397)
Q Consensus       106 ---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t  174 (397)
                               ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........  ......++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  244 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP  244 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCC
Confidence                     1367778889999999999999999999999999999999999999999999986532221  11222345


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA  253 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (397)
                      ..|+|||++.+ ..++.++|||||||++|+|++ |..||.+......+..........                      
T Consensus       245 ~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------  301 (343)
T cd05103         245 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM----------------------  301 (343)
T ss_pred             cceECcHHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC----------------------
Confidence            56999999876 568999999999999999996 899987754433332222110000                      


Q ss_pred             CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                          ......++++.+++.+||+.||++|||+.++++|
T Consensus       302 ----~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         302 ----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             ----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                0011236789999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-41  Score=308.96  Aligned_cols=245  Identities=29%  Similarity=0.472  Sum_probs=205.7

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL   97 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L   97 (397)
                      ||.|+||.||++.+..+++.||+|++....... .....+.+|+.+++.++|+||+++++.++.+...|+||||+. ++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999999899999999987654322 234457789999999999999999999999999999999995 688


Q ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCcee
Q 015948           98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY  177 (397)
Q Consensus        98 ~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y  177 (397)
                      .+.+.... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..............++..|
T Consensus        81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  159 (250)
T cd05123          81 FSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY  159 (250)
T ss_pred             HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccc
Confidence            88876653 58999999999999999999999999999999999999999999999999998765443334455677789


Q ss_pred             eChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcc
Q 015948          178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR  257 (397)
Q Consensus       178 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (397)
                      +|||.+.+ ...+.++|+|||||++|+|++|..||...+.......+...  .                          .
T Consensus       160 ~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~--------------------------~  210 (250)
T cd05123         160 LAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD--P--------------------------L  210 (250)
T ss_pred             cChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--C--------------------------C
Confidence            99999876 45788999999999999999999999777654444443220  0                          0


Q ss_pred             ccCCCCCHHHHHHHHHhcCcCCCCCCCH---HHHhcCCCC
Q 015948          258 SLFPSASDDALDLLSKMFTYDPKARITA---QQALEHRYF  294 (397)
Q Consensus       258 ~~~~~~s~~~~~li~~~L~~dP~~R~t~---~e~l~hp~~  294 (397)
                      .+...++..+.++|.+||..||++||++   +++++||||
T Consensus       211 ~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         211 RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            1122347899999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=3.1e-41  Score=307.84  Aligned_cols=243  Identities=21%  Similarity=0.322  Sum_probs=197.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee-ecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF-PHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-~~~~~~~lv   89 (397)
                      .++|.+.+.||+|+||.||++...  |..+|+|.+....    ....+.+|+.+++.++|+|++++++++ ..++..|+|
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv   78 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   78 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence            357999999999999999999654  7889999875332    234577899999999999999999875 556789999


Q ss_pred             EEccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||++ |+|.+++.+... .+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.......  
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--  156 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  156 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence            99998 588888876543 48899999999999999999999999999999999999999999999999998653322  


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                       .....+..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+.....                 
T Consensus       157 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~-----------------  217 (256)
T cd05082         157 -DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-----------------  217 (256)
T ss_pred             -CCCccceeecCHHHHcc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-----------------
Confidence             22233456999999866 568899999999999999997 9999987655444444322100                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                ....+.+++.+.++|.+||..+|++|||+.++++
T Consensus       218 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         218 ----------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             ----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                      0112345789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.4e-41  Score=313.23  Aligned_cols=264  Identities=22%  Similarity=0.321  Sum_probs=195.5

Q ss_pred             hcce-eeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--C
Q 015948           11 ADRY-LKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--K   83 (397)
Q Consensus        11 ~~~y-~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~   83 (397)
                      .++| .+.+.||+|+||+||++.    ...++..||+|.+..... ......+.+|+.+|+.++||||+++++++..  .
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   80 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG   80 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            4566 999999999999998864    345678999999865422 1233456789999999999999999998755  3


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      ..+|+||||+. |+|.+.+...  .+++..++.++.|++.||+|||++||+||||||+|||++.++.++|+|||+++...
T Consensus        81 ~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080          81 KGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             ceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence            46899999998 5777777654  38999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCc---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          163 SPDRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       163 ~~~~~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .....   .....++..|+|||.+.+ ..++.++|||||||++|+|++|..||......  ...+...   . ...+...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~---~-~~~~~~~  231 (283)
T cd05080         159 EGHEYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGP---K-QGQMTVV  231 (283)
T ss_pred             CcchhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcc---c-ccccchh
Confidence            32211   112234566999999876 45889999999999999999999887654321  1111100   0 0000000


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                       .+.+..     ............+..+.+++.+||..||++|||++++++
T Consensus       232 -~~~~~~-----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         232 -RLIELL-----ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             -hhhhhh-----hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence             000000     000001122356789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2e-41  Score=315.92  Aligned_cols=258  Identities=24%  Similarity=0.318  Sum_probs=199.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC----------------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK----------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII   74 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv   74 (397)
                      .++|++.+.||+|+||+||+|.+..                ++..+|+|++..... ......+.+|+.+++.++|+||+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcc
Confidence            4689999999999999999986432                345799999864422 22234577899999999999999


Q ss_pred             EEEeeeecCCeEEEEEEccc-cCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948           75 ELIDAFPHKGNLHLVFEFME-TDLETVIRNTN----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL  143 (397)
Q Consensus        75 ~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~----------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL  143 (397)
                      ++++++..++.+|+||||+. |+|..++....          ..+++..+..++.||+.||+|||++|++||||||+|||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil  162 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL  162 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence            99999999999999999998 58888876542          23677889999999999999999999999999999999


Q ss_pred             EccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh--CCCCCCCCCcHH
Q 015948          144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDID  219 (397)
Q Consensus       144 l~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~  219 (397)
                      ++.++.++|+|||+++.+.....  ......++..|++||+..+ ..++.++|+|||||++|||++  |..||...+..+
T Consensus       163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05095         163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ  241 (296)
T ss_pred             EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence            99999999999999986533221  1122333567999998766 458999999999999999998  678887766655


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .+......+......                    ........++..+.+|+.+||+.||.+||++.++++
T Consensus       242 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         242 VIENTGEFFRDQGRQ--------------------VYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHHHHhhcccc--------------------ccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            544332211100000                    000112335789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=4.6e-42  Score=314.09  Aligned_cols=247  Identities=26%  Similarity=0.416  Sum_probs=196.0

Q ss_pred             eeeeeeeecCcEEEEEEEEC----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           15 LKREVLGEGTYGVVYKAIDT----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+.+.||.|.||.||+|...    ..+..|+||.+... ........+.+|++++++++||||+++++++...+..++|+
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~   80 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM   80 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeecccccccccccccccccccccccccccccc
Confidence            46789999999999999887    34568999998542 22223557889999999999999999999999888899999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--  166 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--  166 (397)
                      |||. |+|.+.+... ...+++..+..++.||+.||.|||+++++|+||++.|||++.++.+||+|||++........  
T Consensus        81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9998 7899998887 55699999999999999999999999999999999999999999999999999987632221  


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ..........|+|||.+.+ ..++.++||||||+++|||++ |..||...+..+....+......               
T Consensus       161 ~~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~---------------  224 (259)
T PF07714_consen  161 NDSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRL---------------  224 (259)
T ss_dssp             ESTTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEET---------------
T ss_pred             ccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccc---------------
Confidence            1222334566999999876 448999999999999999999 78999888776666665332111               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                  .....++..+.++|.+||..||++||++.++++
T Consensus       225 ------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  225 ------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             ------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                        111235789999999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1.3e-41  Score=315.91  Aligned_cols=264  Identities=23%  Similarity=0.392  Sum_probs=206.9

Q ss_pred             ceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCcc--CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~   86 (397)
                      +|.+.+.||+|+||.||+|++.   .+++.||||++......  ......+.+|+.++.++ +|+||+++++.+..+..+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4889999999999999999864   46789999998754322  22233566899999999 589999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||+. |+|...+... ..+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||++..+....
T Consensus        81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  159 (288)
T cd05583          81 HLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE  159 (288)
T ss_pred             EEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence            99999998 4777777654 458999999999999999999999999999999999999999999999999988754332


Q ss_pred             C-cccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 R-RFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~-~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . ......++..|+|||.+.+.. ..+.++|+||||+++|+|++|..||...........+.+......           
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-----------  228 (288)
T cd05583         160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK-----------  228 (288)
T ss_pred             ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC-----------
Confidence            2 122345778899999986533 367899999999999999999999864432211122211111000           


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHHhcCCCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRYFSSAPLPT  301 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~l~hp~~~~~~~~~  301 (397)
                                   ......++.++.++|.+||+.||++|||   +.++|+||||++..+..
T Consensus       229 -------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~  276 (288)
T cd05583         229 -------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDD  276 (288)
T ss_pred             -------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHH
Confidence                         0112335789999999999999999998   56789999999876643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=2.8e-41  Score=326.46  Aligned_cols=253  Identities=23%  Similarity=0.331  Sum_probs=202.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~   84 (397)
                      .++|.+.+.||+|+||.||+|++.     .+++.||+|++...... .....+.+|+.+|.++. ||||+++++++...+
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~  114 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGACTKGG  114 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence            567999999999999999999853     35578999999754322 22345778999999997 999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC----------------------------------------------------------
Q 015948           85 NLHLVFEFME-TDLETVIRNTN----------------------------------------------------------  105 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~----------------------------------------------------------  105 (397)
                      .+|+|||||. |+|.+++....                                                          
T Consensus       115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (401)
T cd05107         115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD  194 (401)
T ss_pred             CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence            9999999998 68888876432                                                          


Q ss_pred             ---------------------------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948          106 ---------------------------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus       106 ---------------------------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                                                             ..++...+..++.||+.||.|||++||+||||||+|||++.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~  274 (401)
T cd05107         195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE  274 (401)
T ss_pred             chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC
Confidence                                                   13566778889999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK  223 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~  223 (397)
                      ++.+||+|||+++.......  ......++..|+|||++.+ ..++.++|||||||++|||++ |..||......+.+..
T Consensus       275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~  353 (401)
T cd05107         275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN  353 (401)
T ss_pred             CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH
Confidence            99999999999986533221  1223456778999999976 558899999999999999998 8889887665554443


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .+.. +. .+                        .....++.++.+|+.+||..+|.+||++.+|++.
T Consensus       354 ~~~~-~~-~~------------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         354 AIKR-GY-RM------------------------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHc-CC-CC------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3221 00 00                        1122457899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3.2e-42  Score=314.84  Aligned_cols=239  Identities=16%  Similarity=0.255  Sum_probs=190.5

Q ss_pred             eeeeecCcEEEEEEEECCCCc-------EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQ-------TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~-------~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      +.||+|+||.||+|.+...+.       .+|+|.+....  ......+.+|+.+++.++||||+++++++..+...++||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   78 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ   78 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence            469999999999998865543       38888775332  222345678999999999999999999999989999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc--------EEEeeeccceee
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--------LKLADFGLARIF  161 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~--------~kl~DFG~a~~~  161 (397)
                      ||++ |+|..++......+++..+..++.||+.||.|||++||+||||||+|||++.++.        ++++|||++...
T Consensus        79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~  158 (258)
T cd05078          79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV  158 (258)
T ss_pred             ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence            9998 5788887766666899999999999999999999999999999999999987765        699999998765


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      ...    ....++..|+|||++.+...++.++|||||||++|+|++| .+||...+....... ...   .         
T Consensus       159 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~---~---------  221 (258)
T cd05078         159 LPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YED---R---------  221 (258)
T ss_pred             CCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHc---c---------
Confidence            332    2345677799999997756689999999999999999998 466665544433221 110   0         


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                      ..+....+.++.+||.+||+.||++|||++++++.
T Consensus       222 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         222 ----------------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ----------------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence                            01112336789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3e-41  Score=311.93  Aligned_cols=250  Identities=23%  Similarity=0.371  Sum_probs=202.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .++|.+.+.||+|+||+||+|.++.+|.    .+|+|.+..... ......+.+|+.+++.++|+||+++++++.. ...
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   83 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV   83 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence            5789999999999999999999877665    589998765432 2233457789999999999999999999876 789


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ++||||+. |+|.+.+.+....+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence            99999998 68998888776679999999999999999999999999999999999999999999999999998765332


Q ss_pred             Cccc--ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 RRFT--HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ~~~~--~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ....  ...++..|+|||.+.. ..++.++|+|||||++|||++ |.+||.+....+....+.....             
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-------------  229 (279)
T cd05057         164 KEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-------------  229 (279)
T ss_pred             cceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC-------------
Confidence            2221  1122456999999865 568899999999999999998 9999988765554433322100             


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    .......+.++.+++.+||..||.+||++.++++
T Consensus       230 --------------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         230 --------------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             --------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                          0111234688999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.8e-41  Score=320.38  Aligned_cols=252  Identities=24%  Similarity=0.341  Sum_probs=201.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC-------CcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT-------GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH   82 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~   82 (397)
                      ..+|++.+.||+|+||.||+|++...       +..||+|.+.... .......+.+|+.+++++ +||||+++++++..
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            45799999999999999999986432       2368999876432 222234677899999999 79999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                      ++.+|++|||++ |+|.+++.+..               ..++...+..++.||+.||.|||++||+||||||+|||++.
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~  169 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE  169 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence            999999999998 58888876532               23677888999999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK  223 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~  223 (397)
                      ++.+||+|||+++........  .....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  248 (334)
T cd05100         170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL  248 (334)
T ss_pred             CCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            999999999999876433211  112223456999999976 568899999999999999998 8899988766555444


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      +.....                           .......+..+.+||.+||+.+|.+||++.+++++
T Consensus       249 ~~~~~~---------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         249 LKEGHR---------------------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HHcCCC---------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            432100                           01112347899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.1e-41  Score=314.41  Aligned_cols=251  Identities=22%  Similarity=0.335  Sum_probs=201.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|.+.+.||.|+||.||+|.+..     ++..||+|++..... ......+.+|+.+++.++||||+++++++.++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            4679999999999999999998753     578899999864332 1223357789999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC---------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948           86 LHLVFEFME-TDLETVIRNTN---------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL  143 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~---------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL  143 (397)
                      +|+||||++ |+|..++....                     ..+++..+..++.||+.||.|||++|++||||||+||+
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil  162 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL  162 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence            999999998 58888886432                     23788889999999999999999999999999999999


Q ss_pred             EccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015948          144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ  220 (397)
Q Consensus       144 l~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~  220 (397)
                      ++.++.++|+|||++........  .......+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.
T Consensus       163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~  241 (288)
T cd05050         163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV  241 (288)
T ss_pred             ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999999886533221  1122334556999999876 568999999999999999997 8888877665555


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ...+.....                           .......+.++.+||.+||+.||.+|||+.|+++
T Consensus       242 ~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         242 IYYVRDGNV---------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHhcCCC---------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            444322100                           0111234789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.8e-41  Score=310.65  Aligned_cols=239  Identities=20%  Similarity=0.288  Sum_probs=187.4

Q ss_pred             eeeeecCcEEEEEEEECC------------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           18 EVLGEGTYGVVYKAIDTK------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~------------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      +.||+|+||.||+|+...            ....+++|++....  ......+.+|+.+++.++||||+++++++..+..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~   78 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE   78 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            468999999999997432            22358888865432  2233456789999999999999999999999999


Q ss_pred             EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc-------EEEeeecc
Q 015948           86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-------LKLADFGL  157 (397)
Q Consensus        86 ~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~-------~kl~DFG~  157 (397)
                      .++||||+++ .|..++......+++..+..++.||+.||+|||++||+||||||+|||++.++.       ++++|||+
T Consensus        79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~  158 (262)
T cd05077          79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI  158 (262)
T ss_pred             CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence            9999999995 566666555566999999999999999999999999999999999999987664       89999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      +......    ....++..|+|||++.+...++.++|||||||++|||+ +|..||......+. ......   ..    
T Consensus       159 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~---~~----  226 (262)
T cd05077         159 PITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEG---QC----  226 (262)
T ss_pred             CccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhc---Cc----
Confidence            8765332    23456777999999875567899999999999999998 58888876543322 111110   00    


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                           ......++++.+||.+||+.||.+||++.+|+++
T Consensus       227 ---------------------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         227 ---------------------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             ---------------------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence                                 0011225789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=4.5e-41  Score=305.51  Aligned_cols=243  Identities=23%  Similarity=0.386  Sum_probs=196.6

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cC
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TD   96 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~   96 (397)
                      +.||+|+||.||+|... ++..+|+|.+..... ......+.+|+.+++.++||||+++++++...+..++||||++ |+
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   78 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD   78 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence            47899999999999864 678999998765432 2223357789999999999999999999999999999999998 58


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc-cccccCc
Q 015948           97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF-THQVFAR  175 (397)
Q Consensus        97 L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~t~  175 (397)
                      |...+......+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......... ....++.
T Consensus        79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (250)
T cd05085          79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI  158 (250)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence            888877666668999999999999999999999999999999999999999999999999997643322111 1122345


Q ss_pred             eeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948          176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP  254 (397)
Q Consensus       176 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (397)
                      .|+|||++.+ ..++.++|||||||++|+|++ |..||.+.........+.....                         
T Consensus       159 ~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------  212 (250)
T cd05085         159 KWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR-------------------------  212 (250)
T ss_pred             cccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC-------------------------
Confidence            6999999865 568899999999999999998 9999987766555444432110                         


Q ss_pred             CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                        ......++..+.+|+.+||..+|++||++.++++
T Consensus       213 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         213 --MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             --CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence              0112235789999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=4.4e-41  Score=306.52  Aligned_cols=248  Identities=25%  Similarity=0.404  Sum_probs=203.6

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCC----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTG----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      +++.+.||.|+||.||+|.+...+    ..+|+|++....... ....+.+|+.+++.++|+||+++++.+.+.+..|++
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i   79 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV   79 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence            467899999999999999998766    899999986543221 344677899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~-l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||+. ++|.+.+...... +++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus        80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            99998 5888887765444 899999999999999999999999999999999999999999999999999876543221


Q ss_pred             cc-ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 FT-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 ~~-~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      .. ...++..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...+..+....+......               
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------------  223 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL---------------  223 (258)
T ss_pred             ccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC---------------
Confidence            11 1235677999999854 568999999999999999998 88999887666555554322100               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                  ......+.++.+++.+||..||++|||+.|+++
T Consensus       224 ------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      224 ------------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             ------------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence                        111235789999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=4.6e-41  Score=306.70  Aligned_cols=244  Identities=23%  Similarity=0.337  Sum_probs=199.4

Q ss_pred             eeeeecCcEEEEEEEECC-CCc--EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948           18 EVLGEGTYGVVYKAIDTK-TGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~-~~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      +.||+|++|+||+|.+.. ++.  .||||.+...... .....+.+|+.++++++|+||+++++.+.. ..+++||||++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~   78 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP   78 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence            468999999999998865 333  6999998765443 344567789999999999999999999988 89999999997


Q ss_pred             -cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc---cc
Q 015948           95 -TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FT  169 (397)
Q Consensus        95 -g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~---~~  169 (397)
                       |+|.+.+.+.. ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++..+......   ..
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  158 (257)
T cd05040          79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE  158 (257)
T ss_pred             CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence             68888887755 56899999999999999999999999999999999999999999999999999876443221   11


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+....     ..+            
T Consensus       159 ~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~------------  220 (257)
T cd05040         159 HLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-----ERL------------  220 (257)
T ss_pred             CCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-----CcC------------
Confidence            2345667999999865 568999999999999999998 999998777666555554310     000            


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                               ......+..+.+++.+||..+|++||++.++++
T Consensus       221 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         221 ---------ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             ---------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence                     011234789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=9.1e-41  Score=305.55  Aligned_cols=248  Identities=20%  Similarity=0.341  Sum_probs=201.4

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|.+.+.||+|+||.||+|.+. .+..+|+|.+.....   ....+.+|+.+++.++|+||+++++.+.+ ...|++
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v   78 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII   78 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChh---HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence            4689999999999999999999765 456799998764321   23457789999999999999999999877 788999


Q ss_pred             EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||++ |+|.+++.+. ...++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.+.........
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence            99998 6898888764 445788899999999999999999999999999999999999999999999999876432211


Q ss_pred             -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                       .....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+.+..+....+......               
T Consensus       159 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---------------  222 (260)
T cd05073         159 AREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM---------------  222 (260)
T ss_pred             cccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC---------------
Confidence             122234556999999876 568889999999999999998 99999887766555444322110               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                  ......+.++.+++.+||+.+|++||++.++++
T Consensus       223 ------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         223 ------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             ------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence                        111345789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=5.8e-41  Score=308.49  Aligned_cols=251  Identities=24%  Similarity=0.387  Sum_probs=202.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|.+.+.||+|+||.||+|.+...   ...||||....... ......+.+|+.+++.++|+||+++++++.+ ...|
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence            46799999999999999999987544   34689998754332 2233467789999999999999999999875 5578


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||+. |+|.+++......+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++.......
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  162 (270)
T cd05056          83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY  162 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence            9999998 688888877655689999999999999999999999999999999999999999999999999987643321


Q ss_pred             c-ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          167 R-FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       167 ~-~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      . .....++..|+|||.+.. ..++.++|||||||++|+|++ |.+||.+.+..+....+......              
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--------------  227 (270)
T cd05056         163 YKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL--------------  227 (270)
T ss_pred             eecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC--------------
Confidence            1 111223456999999865 568899999999999999986 99999888776655554321100              


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                   ...+.++..+.++|.+||..+|.+|||+.+++..
T Consensus       228 -------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         228 -------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             -------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                         1123457899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-42  Score=325.70  Aligned_cols=238  Identities=24%  Similarity=0.365  Sum_probs=198.2

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      ..-++-||+|+.|.||+|+.  .++.||||+++..+.         .+|+-|++|+|+||+.+.++|.....+|||||||
T Consensus       126 IsELeWlGSGaQGAVF~Grl--~netVAVKKV~elkE---------TdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  126 ISELEWLGSGAQGAVFLGRL--HNETVAVKKVRELKE---------TDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             hhhhhhhccCcccceeeeec--cCceehhHHHhhhhh---------hhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence            34478899999999999964  578999998753221         4888999999999999999999999999999999


Q ss_pred             c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948           94 E-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV  172 (397)
Q Consensus        94 ~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~  172 (397)
                      . |-|...++..+ .+.......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||-++..... .....++
T Consensus       195 a~GqL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMSFa  272 (904)
T KOG4721|consen  195 AQGQLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMSFA  272 (904)
T ss_pred             ccccHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhhhh
Confidence            9 77887777654 5889999999999999999999999999999999999999999999999999887654 4556788


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA  252 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (397)
                      ||..|||||++.. .+.+.++|||||||+|||||||.-||.+-+...+    +-+.|....                   
T Consensus       273 GTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----IwGVGsNsL-------------------  328 (904)
T KOG4721|consen  273 GTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----IWGVGSNSL-------------------  328 (904)
T ss_pred             hhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchhee----EEeccCCcc-------------------
Confidence            9999999999987 6799999999999999999999999875433221    111111100                   


Q ss_pred             CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                         --..+..+++.++-||+.||+..|..||++.++|.|
T Consensus       329 ---~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  329 ---HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             ---cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence               011223457889999999999999999999999988

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=4.8e-41  Score=309.20  Aligned_cols=243  Identities=26%  Similarity=0.380  Sum_probs=192.2

Q ss_pred             eeeeecCcEEEEEEEECCCCc--EEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      +.||+|+||.||+|++..++.  .+++|.+..... ......+.+|+.++.++ .||||+++++++...+.+|+||||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC-HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            468999999999999988776  468887763221 22234567899999999 79999999999999999999999998


Q ss_pred             -cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           95 -TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        95 -g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                       |+|.+++.+..               ..+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~  159 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS  159 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence             68888886532               24789999999999999999999999999999999999999999999999998


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      ....... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||.+.+..+....+.....        
T Consensus       160 ~~~~~~~-~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~--------  229 (270)
T cd05047         160 RGQEVYV-KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR--------  229 (270)
T ss_pred             cccchhh-hccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC--------
Confidence            6432111 1111223456999999865 568999999999999999996 9999987665554444321100        


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                         ......++.++.+|+.+||..||.+|||+.+++.
T Consensus       230 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         230 -------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             -------------------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence                               0011234788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=6.8e-41  Score=307.88  Aligned_cols=249  Identities=21%  Similarity=0.296  Sum_probs=191.1

Q ss_pred             eeeeecCcEEEEEEEECC--CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           18 EVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      +.||+|+||+||+|....  ....+|+|.+..... ......+.+|+.+++.++|+||+++++.+.+...+|+||||+. 
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT-PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL   79 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCC-hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence            368999999999996432  345688887654322 2223356789999999999999999999999999999999998 


Q ss_pred             cCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cc
Q 015948           95 TDLETVIRNTNI----FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RF  168 (397)
Q Consensus        95 g~L~~~~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~  168 (397)
                      |+|.+++.....    ..++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........  ..
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (269)
T cd05042          80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK  159 (269)
T ss_pred             CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence            588888766432    246778899999999999999999999999999999999999999999999875432211  11


Q ss_pred             cccccCceeeChhcccC------ccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          169 THQVFARWYRAPELLFG------AKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~------~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ....++..|+|||++..      ...++.++|||||||++|||++ |.+||....+.+.+..+........+.       
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------  232 (269)
T cd05042         160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK-------  232 (269)
T ss_pred             CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC-------
Confidence            22334567999999743      2356889999999999999998 788998877776666554432211111       


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                     ......++..+.+++..|+ .||++|||++++++
T Consensus       233 ---------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         233 ---------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             ---------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence                           1112345788899999998 59999999999976

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.9e-41  Score=310.56  Aligned_cols=238  Identities=19%  Similarity=0.254  Sum_probs=186.6

Q ss_pred             eeeecCcEEEEEEEECCC------------------------CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee
Q 015948           19 VLGEGTYGVVYKAIDTKT------------------------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII   74 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~~~~------------------------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv   74 (397)
                      .||+|+||.||+|....+                        ...+++|++.....  .....+.+|+.+++.++||||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFFETASLMSQVSHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHHHHHHHHhcCCCCCee
Confidence            689999999999974321                        23588888754321  2234567899999999999999


Q ss_pred             EEEeeeecCCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-----
Q 015948           75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-----  148 (397)
Q Consensus        75 ~l~~~~~~~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-----  148 (397)
                      ++++++..+...|+||||++| +|...+.+....+++..+..++.||+.||+|||++||+||||||+|||++..+     
T Consensus        80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence            999999999999999999995 66666666566789999999999999999999999999999999999997654     


Q ss_pred             --cEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHH
Q 015948          149 --QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIF  225 (397)
Q Consensus       149 --~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~  225 (397)
                        .+||+|||++......    ....++..|+|||.+.+...++.++|||||||++|||+ +|.+||.+....+.... .
T Consensus       160 ~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~  234 (274)
T cd05076         160 SPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-Y  234 (274)
T ss_pred             cceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-H
Confidence              3899999998654322    22345667999999876566899999999999999995 68999987655443221 1


Q ss_pred             HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ....                            ......+.++.++|.+||+.+|++|||+.+++++
T Consensus       235 ~~~~----------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         235 EKKH----------------------------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             Hhcc----------------------------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            1100                            0011235689999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.2e-40  Score=308.64  Aligned_cols=265  Identities=22%  Similarity=0.349  Sum_probs=196.1

Q ss_pred             cceeeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCCe
Q 015948           12 DRYLKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGN   85 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~   85 (397)
                      ++|++.+.||+|+||+||+|.    +..++..||+|.+....  ......+.+|+++++.++||||+++++++.  ....
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence            589999999999999999997    45678899999986432  222345678999999999999999998764  3457


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|+||||++ |+|.+++.+....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~  161 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD  161 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence            899999997 6888888766666899999999999999999999999999999999999999999999999999876432


Q ss_pred             CCcc---cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 DRRF---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~~~~---~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ....   ....++..|+|||++.+ ..++.++|||||||++|||++|..++...... ..    ...+......    ..
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~----~~~~~~~~~~----~~  231 (284)
T cd05081         162 KEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FM----RMMGNDKQGQ----MI  231 (284)
T ss_pred             CcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hh----hhcccccccc----cc
Confidence            2211   11223445999999876 56889999999999999999987665433211 10    0001000000    00


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .....+  .............++.++.+||.+||..+|++|||+.++++
T Consensus       232 ~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         232 VYHLIE--LLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             hHHHHH--HHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            000000  00000001122456789999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=7.9e-41  Score=309.23  Aligned_cols=251  Identities=20%  Similarity=0.294  Sum_probs=199.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~   85 (397)
                      .++|.+.+.||+|+||.||+|.+..    ++..|++|.+.... .......+.+|+.+++.++|+||+++++++.. +..
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            5789999999999999999999876    35789999876332 22233456789999999999999999998655 577


Q ss_pred             EEEEEEccc-cCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948           86 LHLVFEFME-TDLETVIRNTN-------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                      .++++||+. |+|..++....       ..+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~  163 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL  163 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence            899999998 68888776532       3489999999999999999999999999999999999999999999999999


Q ss_pred             ceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          158 ARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       158 a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                      ++.+......  .....++..|+|||++.+ ..++.++|||||||++||+++ |.+||...+..+....+.....   . 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~-  238 (280)
T cd05043         164 SRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR---L-  238 (280)
T ss_pred             cccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCC---C-
Confidence            9865332211  112234556999999876 568999999999999999998 9999987765544333222100   0 


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                             .....+++++.+++.+||..||++|||+.++++
T Consensus       239 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         239 -----------------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             -----------------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                                   001134788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=5.7e-41  Score=310.96  Aligned_cols=266  Identities=21%  Similarity=0.336  Sum_probs=197.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEE----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--Ce
Q 015948           12 DRYLKREVLGEGTYGVVYKAID----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GN   85 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~   85 (397)
                      .-|++.+.||+|+||.||+|+.    ..++..||+|.+..... ......+.+|+.+++.++||||+++++++...  ..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            3478999999999999999974    45788999999864432 22334677899999999999999999998775  57


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .|+||||++ ++|..++.+....+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||+++.....
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~  162 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  162 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence            899999997 5788877665556899999999999999999999999999999999999999999999999999876443


Q ss_pred             CCc---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 DRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~~~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ...   .....++..|+|||++.+ ..++.++|||||||++|+|+++..++.....  ..   ....+.... .+.    
T Consensus       163 ~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~---~~~~~~~~~-~~~----  231 (284)
T cd05079         163 KEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMT--LF---LKMIGPTHG-QMT----  231 (284)
T ss_pred             ccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccc--hh---hhhcccccc-ccc----
Confidence            221   123345567999999876 4688999999999999999998765432111  00   000000000 000    


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ......  .............++..+.+||.+||+.||.+|||+.+++++
T Consensus       232 ~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         232 VTRLVR--VLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHHH--HHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            000000  000000011234568999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.6e-40  Score=305.54  Aligned_cols=249  Identities=20%  Similarity=0.259  Sum_probs=190.2

Q ss_pred             eeeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           18 EVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      +.||+|+||.||+|...  .++..+|+|.++..... .....+.+|+.+++.++||||+++++++.+...+|+||||++ 
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL   79 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence            46899999999999754  35568999988654322 122357789999999999999999999999999999999998 


Q ss_pred             cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc--c
Q 015948           95 TDLETVIRNTN----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR--F  168 (397)
Q Consensus        95 g~L~~~~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~--~  168 (397)
                      |+|.+++....    ...+...+..++.|++.||.|||++|++||||||+||+++.++++||+|||+++........  .
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~  159 (269)
T cd05087          80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP  159 (269)
T ss_pred             CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence            68888876532    23567788899999999999999999999999999999999999999999999764332211  1


Q ss_pred             cccccCceeeChhcccCc------cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          169 THQVFARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~------~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ....++..|+|||++.+.      ..++.++|||||||++|||++ |.+||......+.............+.       
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------  232 (269)
T cd05087         160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK-------  232 (269)
T ss_pred             CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC-------
Confidence            233456779999998542      135789999999999999996 999998766555433322211110000       


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                     .......++.+.+++.+|+ .+|++|||+++|+.
T Consensus       233 ---------------~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         233 ---------------PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             ---------------CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence                           0111234778999999998 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=7.7e-41  Score=313.06  Aligned_cols=251  Identities=21%  Similarity=0.341  Sum_probs=198.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .++|++.+.||+|+||.||+|.+..+|.    .+|+|.+..... ......+.+|+.+++.++||||+++++++... ..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~   83 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI   83 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence            5678999999999999999999887776    468887754322 22233567899999999999999999998654 57


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ++++||+. |+|.+.+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence            78999998 68888887766668999999999999999999999999999999999999999999999999998764332


Q ss_pred             Cc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 RR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ..  .....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+. ..+.......           
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~-----------  230 (303)
T cd05110         164 KEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLEKGERL-----------  230 (303)
T ss_pred             cccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHCCCCC-----------
Confidence            21  222334567999999876 568999999999999999997 8889877643332 2222210000           


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                     ...+..+.++.+++.+|+..+|++||+++++++.
T Consensus       231 ---------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         231 ---------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             ---------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                           0112346789999999999999999999998874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.1e-40  Score=305.18  Aligned_cols=244  Identities=21%  Similarity=0.317  Sum_probs=190.2

Q ss_pred             eeeeecCcEEEEEEEECC---CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee-cCCeEEEEEEcc
Q 015948           18 EVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-HKGNLHLVFEFM   93 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-~~~~~~lv~e~~   93 (397)
                      +.||+|+||.||+|.+..   .+..+|+|.+..... ......+.+|+.+++.++||||+++++++. .++..|+||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   79 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM   79 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence            468999999999998643   345799998753221 122345678999999999999999999764 566789999999


Q ss_pred             c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----Ccc
Q 015948           94 E-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----RRF  168 (397)
Q Consensus        94 ~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----~~~  168 (397)
                      . |+|..++.+....++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++......    ...
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  159 (262)
T cd05058          80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH  159 (262)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence            8 68888887765567888889999999999999999999999999999999999999999999997653321    111


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||...+..+....+....   .   +           
T Consensus       160 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~---~---~-----------  221 (262)
T cd05058         160 TGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR---R---L-----------  221 (262)
T ss_pred             ccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC---C---C-----------
Confidence            22334567999999876 568899999999999999999 567887766555443332210   0   0           


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                .....++..+.+++.+||..+|++||++.++++
T Consensus       222 ----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         222 ----------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             ----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                      001124688999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=4.2e-41  Score=303.64  Aligned_cols=228  Identities=22%  Similarity=0.316  Sum_probs=186.1

Q ss_pred             cCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHHHHH
Q 015948           23 GTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVI  101 (397)
Q Consensus        23 G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~  101 (397)
                      |.||.||+|+++.+++.||+|.++....       ..+|...+....||||+++++++.+...+|+||||++ |+|.+.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   76 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI   76 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh-------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence            8999999999999999999999875431       2245555666679999999999999999999999998 5788877


Q ss_pred             HhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChh
Q 015948          102 RNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE  181 (397)
Q Consensus       102 ~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE  181 (397)
                      .+.. .+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+......   .....++..|+|||
T Consensus        77 ~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE  152 (237)
T cd05576          77 SKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPE  152 (237)
T ss_pred             HHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCc
Confidence            6644 4899999999999999999999999999999999999999999999999988765432   22334566799999


Q ss_pred             cccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCC
Q 015948          182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP  261 (397)
Q Consensus       182 ~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (397)
                      .+.+ ..++.++|+||+||++|||++|..+|.......                 ...               ....+.+
T Consensus       153 ~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------------~~~---------------~~~~~~~  199 (237)
T cd05576         153 VGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSGI-----------------NTH---------------TTLNIPE  199 (237)
T ss_pred             ccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------------ccc---------------cccCCcc
Confidence            9865 557889999999999999999998765331100                 000               0001223


Q ss_pred             CCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCC
Q 015948          262 SASDDALDLLSKMFTYDPKARITA-----QQALEHRYF  294 (397)
Q Consensus       262 ~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~  294 (397)
                      .+++.+++||.+||+.||++|+++     +++++||||
T Consensus       200 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         200 WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            458899999999999999999985     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.9e-40  Score=302.32  Aligned_cols=242  Identities=24%  Similarity=0.398  Sum_probs=197.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||.||++.  .+++.||+|.+....    ....+.+|+.+++.++||||+++++++..+ ..|+||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~   77 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM   77 (254)
T ss_pred             HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence            4679999999999999999985  578899999985432    234677899999999999999999998665 479999


Q ss_pred             Eccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||+. |+|..++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......   
T Consensus        78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---  154 (254)
T cd05083          78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---  154 (254)
T ss_pred             ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence            9998 58888887653 358899999999999999999999999999999999999999999999999997643221   


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      .....+..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...+..+....+......                 
T Consensus       155 ~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------  216 (254)
T cd05083         155 DNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM-----------------  216 (254)
T ss_pred             CCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC-----------------
Confidence            12233456999999865 568899999999999999997 99999877665544443221100                 


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                .....++..+.+|+.+||..+|.+||+++++++
T Consensus       217 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         217 ----------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             ----------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                      011245789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.9e-40  Score=304.78  Aligned_cols=251  Identities=26%  Similarity=0.441  Sum_probs=202.4

Q ss_pred             ceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCcc--------CCccchHHHHHHHHHh-cCCCCeeEEEeeeec
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQK--------EGVNFTALREIKLLKE-LKSPHIIELIDAFPH   82 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~--------~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~   82 (397)
                      .|.+.+.||+|+||.||+|.+.. +++.+|+|.+......        ......+.+|+.++.+ ++|+||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            48899999999999999999987 6789999988653311        1122345678888865 799999999999999


Q ss_pred             CCeEEEEEEcccc-CHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeecc
Q 015948           83 KGNLHLVFEFMET-DLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        83 ~~~~~lv~e~~~g-~L~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                      ++..|+||||++| +|.+.+.   .....+++..++.++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            9999999999985 6766653   344568999999999999999999996 7899999999999999999999999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      +....... ......++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+.......+........     
T Consensus       161 ~~~~~~~~-~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----  233 (269)
T cd08528         161 AKQKQPES-KLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL-----  233 (269)
T ss_pred             eeeccccc-ccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC-----
Confidence            98765443 3445567888999999976 5589999999999999999999999987665554444432211000     


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                           .....++++.+||.+||+.||++||++.|+.++
T Consensus       234 ---------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         234 ---------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             ---------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence                                 001347899999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-41  Score=315.91  Aligned_cols=261  Identities=25%  Similarity=0.386  Sum_probs=199.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-eEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-NLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-~~~lv   89 (397)
                      .++|.-...||+|+||.||+|.-.. |..||||.+.......  ...+.+|+.+|.+++|||+|+|+++|.+.+ ..+||
T Consensus        74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV  150 (361)
T KOG1187|consen   74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV  150 (361)
T ss_pred             HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence            5778888999999999999998654 4899999776544332  345899999999999999999999999888 59999


Q ss_pred             EEccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCC---ccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           90 FEFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKW---VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~---ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +||+. |+|.+.+..... .+++.....|+.+++.||+|||...   ||||||||+|||+|++.+.||+|||+|+.....
T Consensus       151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~  230 (361)
T KOG1187|consen  151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG  230 (361)
T ss_pred             EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence            99998 899999988766 7999999999999999999999865   999999999999999999999999999665331


Q ss_pred             CCccccc-ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHH-HHHhCCCCCCCCCCCC
Q 015948          165 DRRFTHQ-VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--DIDQLGKI-FAAFGTATPSQWPDLA  240 (397)
Q Consensus       165 ~~~~~~~-~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~i-~~~~~~~~~~~~~~~~  240 (397)
                      ....... .||..|++||.+.. ...+.++||||||++|.||++|+.+.+...  ....+... ...+.......+.|. 
T Consensus       231 ~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~-  308 (361)
T KOG1187|consen  231 DTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDP-  308 (361)
T ss_pred             ccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCC-
Confidence            2222222 78999999999865 568999999999999999999998877542  11111111 112111111122211 


Q ss_pred             CCccccccccccCCCcc-ccCC--CCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          241 YLPDYVEYQYVAAPPLR-SLFP--SASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~~~--~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    .+. ..++  ..-..+..+..+|++.+|.+||++.|+++
T Consensus       309 --------------~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  309 --------------RLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             --------------CccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence                          111 0111  01123667888999999999999999765

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.8e-40  Score=303.00  Aligned_cols=236  Identities=19%  Similarity=0.267  Sum_probs=187.0

Q ss_pred             eeeeecCcEEEEEEEECCCC----------cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           18 EVLGEGTYGVVYKAIDTKTG----------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~----------~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      +.||+|+||.||+|.+..++          ..+++|.+......   ...+.+|+.+++.++||||+++++++.. ...+
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   76 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI   76 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence            47899999999999998776          34777776533221   4567789999999999999999999887 7789


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-------cEEEeeeccce
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-------QLKLADFGLAR  159 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-------~~kl~DFG~a~  159 (397)
                      +||||+. |+|..++......++...+..++.||+.||+|||++||+||||||+|||++.++       .+||+|||++.
T Consensus        77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~  156 (259)
T cd05037          77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI  156 (259)
T ss_pred             EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence            9999998 577777766554689999999999999999999999999999999999999888       79999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      ....    .....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+........ ..   .  ..+ 
T Consensus       157 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~-~~---~--~~~-  225 (259)
T cd05037         157 TVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY-QD---Q--HRL-  225 (259)
T ss_pred             cccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH-hc---C--CCC-
Confidence            7543    1223455669999998764 368899999999999999998 57777665432222111 10   0  000 


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                            .......+.++|.+||..+|.+|||+.++++
T Consensus       226 ----------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         226 ----------------------PMPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             ----------------------CCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence                                  0011378999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=3.2e-40  Score=304.29  Aligned_cols=252  Identities=19%  Similarity=0.335  Sum_probs=201.7

Q ss_pred             cceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ++|++.+.||+|+||+||+|+.+.     +.+.+++|.+..... ......+.+|+.++++++|+||+++++++.+.+..
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   83 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH   83 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence            689999999999999999998754     346799998754322 11334577899999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948           87 HLVFEFME-TDLETVIRNTN--------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~--------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                      |+||||++ |+|.+++....        ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||+
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~  163 (275)
T cd05046          84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL  163 (275)
T ss_pred             eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence            99999998 68888876543        1589999999999999999999999999999999999999999999999999


Q ss_pred             ceeeCCCC-CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          158 ARIFGSPD-RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       158 a~~~~~~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      +....... .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+..+......+....     ..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~-----~~  237 (275)
T cd05046         164 SKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK-----LE  237 (275)
T ss_pred             ccccCcccccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC-----cC
Confidence            87543222 12233455667999999866 457889999999999999998 788887766555444432210     00


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      |+                     ....++..+.+++.+||..||.+||++.+++.+
T Consensus       238 ~~---------------------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         238 LP---------------------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CC---------------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            10                     112347899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.9e-40  Score=304.68  Aligned_cols=244  Identities=25%  Similarity=0.402  Sum_probs=194.9

Q ss_pred             eeeeecCcEEEEEEEECCCC------cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           18 EVLGEGTYGVVYKAIDTKTG------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      +.||+|+||.||+|++....      ..+|+|.+..... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME   79 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence            46899999999999876443      6899998864322 2234467789999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-----cEEEeeeccce
Q 015948           92 FME-TDLETVIRNT------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-----QLKLADFGLAR  159 (397)
Q Consensus        92 ~~~-g~L~~~~~~~------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-----~~kl~DFG~a~  159 (397)
                      |++ |+|...+...      ...+++..+..++.||+.||.|||+++++|+||||+||+++.++     .++|+|||++.
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~  159 (269)
T cd05044          80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR  159 (269)
T ss_pred             ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence            998 5888887652      23478899999999999999999999999999999999999887     89999999997


Q ss_pred             eeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          160 IFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       160 ~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      .......  ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+.....       
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-------  231 (269)
T cd05044         160 DIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR-------  231 (269)
T ss_pred             ccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc-------
Confidence            6533221  1122334567999999976 458999999999999999998 9999987766555444321100       


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                          ......++..+.+||.+||..+|.+||++.++++
T Consensus       232 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         232 --------------------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             --------------------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                                0112345789999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-42  Score=328.44  Aligned_cols=269  Identities=26%  Similarity=0.333  Sum_probs=199.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC------e
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG------N   85 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~------~   85 (397)
                      .-+...+.||+|+||.||+++++.+|+.||||.++.... ....+...+|+++|++|+|+|||++++.-++..      .
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~   91 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL   91 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence            456778999999999999999999999999999987542 223445678999999999999999998865543      5


Q ss_pred             EEEEEEccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc--CCc--EEEeeeccc
Q 015948           86 LHLVFEFME-TDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--HGQ--LKLADFGLA  158 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~--~~~--~kl~DFG~a  158 (397)
                      ..+|||||. |+|...+.+.  ...|++.++..++..+..||.|||++||+||||||+||++-.  +|+  -||+|||.|
T Consensus        92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            679999998 6888888764  335999999999999999999999999999999999999853  343  799999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      +.+.+. ..+...+||+.|.+||++...+.|+..+|.|||||++|+++||..||...........++....+..+....-
T Consensus       172 rel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i  250 (732)
T KOG4250|consen  172 RELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI  250 (732)
T ss_pred             ccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence            988654 4888999999999999997557899999999999999999999998876544322222222222222221110


Q ss_pred             --CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC
Q 015948          239 --LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI  283 (397)
Q Consensus       239 --~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  283 (397)
                        ......-+.+....+. ...+.+.+-.-+-..+..+|..+|++|.
T Consensus       251 ~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  251 GAQEEENGPVEWSSTLPQ-PNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             eeecccCCceeeeccCCC-cccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence              0000001111111111 1122222223345678889999999998

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.6e-40  Score=304.46  Aligned_cols=250  Identities=23%  Similarity=0.321  Sum_probs=196.2

Q ss_pred             eeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC------
Q 015948           14 YLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG------   84 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~------   84 (397)
                      |.+.+.||+|+||.||+|...   .++..||||++............+.+|+++++.++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            678899999999999999864   35789999998765444444456778999999999999999999875432      


Q ss_pred             eEEEEEEccc-cCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           85 NLHLVFEFME-TDLETVIRNT-----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~-----~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                      ..++++||+. |+|..++...     ...++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence            3478899998 6776665432     124788999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          159 RIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       159 ~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      +.......  ......++..|++||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.....      
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------  233 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR------  233 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc------
Confidence            87543221  1122334566999999866 567889999999999999998 8899987765554443332100      


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                           ....+..+..+.+++.+||..+|++||++.+++++
T Consensus       234 ---------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         234 ---------------------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             ---------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                 00112347899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=5e-40  Score=304.09  Aligned_cols=255  Identities=21%  Similarity=0.337  Sum_probs=199.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--CC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~   84 (397)
                      .++|.+.+.||+|+||.||+|...    .+++.||+|++...... .....+.+|+++++.++|+||+++++++..  ..
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence            357889999999999999999854    34789999998754432 234567889999999999999999999877  56


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ..|+||||++ |+|..++......++...+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence            8999999997 588888877665699999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCccc---ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH-----------HHHHHHHhC
Q 015948          164 PDRRFT---HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-----------LGKIFAAFG  229 (397)
Q Consensus       164 ~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-----------~~~i~~~~~  229 (397)
                      ......   ...++..|+|||.+.+ ..++.++|+|||||++|||++|..||........           ...+...+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK  240 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence            222111   1233455999999876 4688999999999999999999988765422110           111111100


Q ss_pred             CCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ..                       .........+.++.+|+.+||..+|++|||+.|+++
T Consensus       241 ~~-----------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         241 EG-----------------------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             cC-----------------------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            00                       000111234688999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-41  Score=319.14  Aligned_cols=250  Identities=21%  Similarity=0.341  Sum_probs=206.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCc---E-EEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQ---T-VAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~-~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ++-.+.++||+|+||.||+|.-+..+.   . ||+|...... ........+++|+++++.++|||||++|++...+..+
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl  236 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL  236 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence            344556899999999999998765432   3 8999887532 3444556788999999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+|||+|. |+|.+++++....++..+...++.+.+.||+|||+++++||||-..|+|++.++.+||+|||+++... ..
T Consensus       237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~-~~  315 (474)
T KOG0194|consen  237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS-QY  315 (474)
T ss_pred             EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc-ce
Confidence            99999998 58999999887779999999999999999999999999999999999999999999999999987543 11


Q ss_pred             Cccc-ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH-hCCCCCCCCCCCCCC
Q 015948          166 RRFT-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA-FGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ~~~~-~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~  242 (397)
                      .... ..-....|+|||.+.. ..|+.++|||||||++||+++ |..||.+....+...+|... .....+         
T Consensus       316 ~~~~~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~---------  385 (474)
T KOG0194|consen  316 VMKKFLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP---------  385 (474)
T ss_pred             eeccccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC---------
Confidence            1111 1112345999999976 479999999999999999997 88999999999988888443 222111         


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                        ...+.++..++.+|+..||++|+++.++.+
T Consensus       386 ------------------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  386 ------------------SKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             ------------------CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence                              133678999999999999999999998875

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=2.7e-40  Score=331.08  Aligned_cols=270  Identities=24%  Similarity=0.368  Sum_probs=182.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCC----CcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEee---
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKT----GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDA---   79 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~---   79 (397)
                      -.++|.+.+.||+|+||.||+|++..+    +..||+|++.....         .|+.+...+   .+.+++.++..   
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---------~e~~~~e~l~~~~~~~~~~~~~~~~~  200 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---------VEIWMNERVRRACPNSCADFVYGFLE  200 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---------hHHHHHHHHHhhchhhHHHHHHhhhc
Confidence            357899999999999999999999988    89999998753211         122222222   22223222222   


Q ss_pred             ---eecCCeEEEEEEccc-cCHHHHHHhcCCC-------------------CCHHHHHHHHHHHHHHHHHhHhCCccccC
Q 015948           80 ---FPHKGNLHLVFEFME-TDLETVIRNTNIF-------------------LSPADIKSYMQMTLKGLAFCHKKWVLHRD  136 (397)
Q Consensus        80 ---~~~~~~~~lv~e~~~-g~L~~~~~~~~~~-------------------l~~~~~~~~~~qil~aL~~lH~~~ivHrD  136 (397)
                         ...+..+++|+||++ ++|.+++......                   .....+..++.||+.||.|||++||+|||
T Consensus       201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD  280 (566)
T PLN03225        201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD  280 (566)
T ss_pred             ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence               245668999999998 5777777654321                   12345678999999999999999999999


Q ss_pred             CCCCcEEEcc-CCcEEEeeeccceeeCCC-CCcccccccCceeeChhcccCcc---------------------CCCCcc
Q 015948          137 MKPNNLLIGS-HGQLKLADFGLARIFGSP-DRRFTHQVFARWYRAPELLFGAK---------------------QYGAGV  193 (397)
Q Consensus       137 lkp~NILl~~-~~~~kl~DFG~a~~~~~~-~~~~~~~~~t~~y~aPE~l~~~~---------------------~~~~~~  193 (397)
                      |||+|||++. ++.+||+|||+|+.+... .......++++.|+|||++....                     .++.++
T Consensus       281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~  360 (566)
T PLN03225        281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF  360 (566)
T ss_pred             CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence            9999999986 589999999999865332 22334567888999999764321                     234567


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcc---ccCCCCCHHHHHH
Q 015948          194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR---SLFPSASDDALDL  270 (397)
Q Consensus       194 DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~l  270 (397)
                      |||||||+||||+++..  ...++...+..++...+... ..|...      ...  ...+...   .+....+..+++|
T Consensus       361 DVwSlGviL~el~~~~~--~~~~~~~~~~~~l~~~~~~~-~~~~~~------~~~--~~~~~~~~~~~~~d~~~~~~~dL  429 (566)
T PLN03225        361 DIYSAGLIFLQMAFPNL--RSDSNLIQFNRQLKRNDYDL-VAWRKL------VEP--RASPDLRRGFEVLDLDGGAGWEL  429 (566)
T ss_pred             ccHHHHHHHHHHHhCcC--CCchHHHHHHHHHHhcCCcH-HHHHHh------hcc--ccchhhhhhhhhccccchHHHHH
Confidence            99999999999998654  34444445544444322110 001000      000  0000001   1112224567799


Q ss_pred             HHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          271 LSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       271 i~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      |.+||++||++|||+.|+|+||||.....
T Consensus       430 i~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        430 LKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             HHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence            99999999999999999999999987543

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.2e-39  Score=299.64  Aligned_cols=249  Identities=20%  Similarity=0.231  Sum_probs=189.7

Q ss_pred             eeeeecCcEEEEEEEECCC--CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           18 EVLGEGTYGVVYKAIDTKT--GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      +.||+|+||+||+|.....  ...+++|.+..... ......+.+|+.+++.++||||+++++.+......|+||||+. 
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL   79 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence            3699999999999975433  23466666554322 1223467889999999999999999999999999999999999 


Q ss_pred             cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--Cccc
Q 015948           95 TDLETVIRNTN---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFT  169 (397)
Q Consensus        95 g~L~~~~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--~~~~  169 (397)
                      |+|..++.+..   ..+++..++.++.||+.||+|||+++++||||||+|||++.++.+||+|||++.......  ....
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  159 (268)
T cd05086          80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED  159 (268)
T ss_pred             CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence            58888886532   236677888999999999999999999999999999999999999999999986432211  1123


Q ss_pred             ccccCceeeChhcccCc------cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          170 HQVFARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~------~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ...++..|+|||++...      ..++.++|||||||++|||++ |.+||...++.+.+..+........+.        
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------  231 (268)
T cd05086         160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK--------  231 (268)
T ss_pred             CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC--------
Confidence            44567789999997431      235788999999999999996 578888777776666654431111000        


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    .......++.+.+++..|+ .+|.+||+++++++
T Consensus       232 --------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         232 --------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             --------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence                          0111234788999999999 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-40  Score=333.75  Aligned_cols=251  Identities=25%  Similarity=0.378  Sum_probs=212.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC-----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .+.-++.+.||+|+||.||.|......     ..||||.+..... ......|++|..+|+.++|||||++++.+-+.+.
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence            556788999999999999999765432     3499998876533 3345578999999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           86 LHLVFEFME-TDLETVIRNT------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                      .+|++|||+ |||+.++++.      ...++..+...++.+|++|+.||+++++|||||-..|+||+....+||+|||+|
T Consensus       770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA  849 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLA  849 (1025)
T ss_pred             cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchh
Confidence            999999998 7999999998      667999999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCCCCccccccc--CceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~--t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      +.+...+....+..+  ..-|||||.+.. ..++.++|||||||+|||+++ |..||.+.++.+.+.-..+.-....|. 
T Consensus       850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~-  927 (1025)
T KOG1095|consen  850 RDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPS-  927 (1025)
T ss_pred             HhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCC-
Confidence            954333322222222  234999999986 579999999999999999997 899999999999888766654333333 


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                                .+++.+.+++..||+.+|++||+...|++
T Consensus       928 --------------------------~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  928 --------------------------YCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             --------------------------CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence                                      34678889999999999999999999987

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-40  Score=322.68  Aligned_cols=265  Identities=28%  Similarity=0.397  Sum_probs=218.7

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeee--
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP--   81 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~--   81 (397)
                      +....=.+.|+|.+.||.|.+|.||+++++++++..|+|+......   ..+.+..|.+||+.+ .|||++.++++|.  
T Consensus        12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            3344447789999999999999999999999999999999865433   334566789999988 5799999999983  


Q ss_pred             ---cCCeEEEEEEcccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948           82 ---HKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        82 ---~~~~~~lv~e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                         .++.+|||||||+| +.-++++.. +..+.|..+..|++.++.||.+||.+.++|||||-.|||++.+|.|||+|||
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFG  168 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFG  168 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeee
Confidence               35689999999995 555555443 4569999999999999999999999999999999999999999999999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccCcc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFGAK----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT  232 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  232 (397)
                      .+..+...-....+.+||++|||||++....    .|+.++|+||||++..||.-|.||+-+......+-.|        
T Consensus       169 vSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I--------  240 (953)
T KOG0587|consen  169 VSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI--------  240 (953)
T ss_pred             eeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC--------
Confidence            9999988888888999999999999996533    3788999999999999999999998766543322211        


Q ss_pred             CCCCCCCCCCccccccccccCCCc-cccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPL-RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                        ...|+. -..+...+..+.+||..||.+|-.+||+..++|+|||.+..+
T Consensus       241 ------------------pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  241 ------------------PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP  289 (953)
T ss_pred             ------------------CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence                              111221 122345589999999999999999999999999999998443

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.1e-40  Score=327.93  Aligned_cols=250  Identities=24%  Similarity=0.389  Sum_probs=210.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ..+-+..+.||+|+||+||+|+-..     ....||||.++... .......|.||+.+|..|+|||||+|++.+..++-
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P  563 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDP  563 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence            3456778999999999999997543     33579999987543 22355678999999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcCC-------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948           86 LHLVFEFME-TDLETVIRNTNI-------------FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~-------------~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                      +|+|+|||. |||.++++....             +|+..+...|+.||+.|++||-++.+|||||-..|+||+++-.||
T Consensus       564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VK  643 (774)
T KOG1026|consen  564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVK  643 (774)
T ss_pred             eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEE
Confidence            999999999 999999976432             288889999999999999999999999999999999999999999


Q ss_pred             EeeeccceeeCCCC-Cccc-ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHh
Q 015948          152 LADFGLARIFGSPD-RRFT-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF  228 (397)
Q Consensus       152 l~DFG~a~~~~~~~-~~~~-~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~  228 (397)
                      |+|||+++..-+.+ .... ...-...|||||.+.. ..|+.++||||+||+|||+++ |..|+.+.++.++++.|.++-
T Consensus       644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~  722 (774)
T KOG1026|consen  644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ  722 (774)
T ss_pred             ecccccchhhhhhhhhcccCCceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCC
Confidence            99999999764433 2222 3333456999999976 459999999999999999996 899999999999999987653


Q ss_pred             CCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948          229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL  289 (397)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l  289 (397)
                      ....                           +...+.++.+|+..|++.+|++||+..||=
T Consensus       723 lL~~---------------------------Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  723 LLSC---------------------------PENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             cccC---------------------------CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            3222                           234578999999999999999999999974

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-42  Score=295.44  Aligned_cols=266  Identities=21%  Similarity=0.331  Sum_probs=209.0

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHH-HhcCCCCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLL-KELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l-~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ....++.+-+..||.|+||+|++..++.+|+..|||.|+.... +....+++.|.+.. +.-+.||||++|++.-.++..
T Consensus        60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc  138 (361)
T KOG1006|consen   60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC  138 (361)
T ss_pred             ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence            3345666678899999999999999999999999999987655 22334566677654 445689999999998889999


Q ss_pred             EEEEEccccCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           87 HLVFEFMETDLETVIRN----TNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~----~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      ||.||.|.-++..+.+.    ++..++|..+-.+....+.||+||... .|||||+||+|||++..|.+||||||++-.+
T Consensus       139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL  218 (361)
T KOG1006|consen  139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL  218 (361)
T ss_pred             eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence            99999999776555432    344589999999999999999999865 7999999999999999999999999998765


Q ss_pred             CCCCCcccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .. ...-+...|.+.|||||.+.... .|+.++|+||||++|||+.||..|+.+-+. .+++.++..+   .+|.-..+.
T Consensus       219 v~-SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~g---dpp~l~~~~  294 (361)
T KOG1006|consen  219 VD-SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIG---DPPILLFDK  294 (361)
T ss_pred             HH-HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcC---CCCeecCcc
Confidence            33 22344567778899999996533 599999999999999999999999887544 3444444332   222111111


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                         .--..|..+..||..||.+|-..||...+++++||+...
T Consensus       295 -------------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  295 -------------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY  333 (361)
T ss_pred             -------------------cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence                               111348899999999999999999999999999998753

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=6.8e-38  Score=306.71  Aligned_cols=271  Identities=25%  Similarity=0.394  Sum_probs=186.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC----------------CCCcEEEEEEeecCCcc------------CCccchHHHHH
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT----------------KTGQTVAIKKIRLGKQK------------EGVNFTALREI   62 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~----------------~~~~~~aiK~i~~~~~~------------~~~~~~~~~E~   62 (397)
                      .++|.+.++||+|+||+||+|...                ..++.||||.+......            ....+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            678999999999999999999752                24567999998653321            11122344578


Q ss_pred             HHHHhcCCCCe-----eEEEeeeec--------CCeEEEEEEccc-cCHHHHHHhcC-----------------------
Q 015948           63 KLLKELKSPHI-----IELIDAFPH--------KGNLHLVFEFME-TDLETVIRNTN-----------------------  105 (397)
Q Consensus        63 ~~l~~l~hp~i-----v~l~~~~~~--------~~~~~lv~e~~~-g~L~~~~~~~~-----------------------  105 (397)
                      .++.+++|.++     ++++++|..        ++..++||||++ |+|.+++....                       
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            88888877654     566666642        356899999998 57777765321                       


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cccccccCceeeChhccc
Q 015948          106 IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARWYRAPELLF  184 (397)
Q Consensus       106 ~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~t~~y~aPE~l~  184 (397)
                      ..++...++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++........ ......+++.|+|||++.
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~  383 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV  383 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence            1245677889999999999999999999999999999999999999999999976543221 112233478899999985


Q ss_pred             CccC-------------------CC--CcchHHHHHHHHHHHHhCCC-CCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          185 GAKQ-------------------YG--AGVDVWAAGCIFAELLNRRP-FLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       185 ~~~~-------------------~~--~~~DiwSlG~il~ell~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ....                   |+  .+.|+||+||++|+|++|.. +|.+......   ........ ...|...   
T Consensus       384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~---~~~~~~~~-~~~~r~~---  456 (507)
T PLN03224        384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT---ELRQYDND-LNRWRMY---  456 (507)
T ss_pred             CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh---HHhhccch-HHHHHhh---
Confidence            4211                   22  24799999999999999874 6643221110   00000000 0000000   


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCC---CCCCCHHHHhcCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDP---KARITAQQALEHRYFSS  296 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP---~~R~t~~e~l~hp~~~~  296 (397)
                              ......-..+...++.++||+.+||..+|   .+|+|++|+|+||||..
T Consensus       457 --------~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        457 --------KGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             --------cccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence                    00000012344568999999999999876   68999999999999953

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=5.8e-39  Score=292.71  Aligned_cols=281  Identities=32%  Similarity=0.541  Sum_probs=216.8

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECC---CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK   83 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~   83 (397)
                      ..+.+.|.+.++||.|.|++||+|.+..   .+++||+|.+.......    ++.+|+++|..+ .+.||+++.+++..+
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~----ri~~El~~L~~~gG~~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS----RILNELEMLYRLGGSDNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCch----HHHHHHHHHHHhccchhhhcchhhhccC
Confidence            4568899999999999999999998877   78899999987654433    577999999999 479999999999999


Q ss_pred             CeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceee
Q 015948           84 GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIF  161 (397)
Q Consensus        84 ~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~  161 (397)
                      +++.+|+||++. +-.+++..    ++...++.|++.++.||.++|.+|||||||||.|+|.+.. +.-.|+|||+|...
T Consensus       108 d~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~  183 (418)
T KOG1167|consen  108 DQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY  183 (418)
T ss_pred             CeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence            999999999995 45555544    7789999999999999999999999999999999999854 77899999999621


Q ss_pred             C----------------CC----------------------------CCcccccccCceeeChhcccCccCCCCcchHHH
Q 015948          162 G----------------SP----------------------------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA  197 (397)
Q Consensus       162 ~----------------~~----------------------------~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwS  197 (397)
                      .                .+                            ........||++|+|||+++.+..-+.++||||
T Consensus       184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws  263 (418)
T KOG1167|consen  184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS  263 (418)
T ss_pred             HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence            0                00                            001124567899999999999888899999999


Q ss_pred             HHHHHHHHHhCC-CCCCCCCcHHHHHHHHHHhCCCCCCCCC---CC------C---CCccc-ccccccc-------CC--
Q 015948          198 AGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWP---DL------A---YLPDY-VEYQYVA-------AP--  254 (397)
Q Consensus       198 lG~il~ell~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~---~~------~---~~~~~-~~~~~~~-------~~--  254 (397)
                      .|||+..++++. |+|...++.+.+..|...+|...-+..+   +.      .   ..++. ..|....       ..  
T Consensus       264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n  343 (418)
T KOG1167|consen  264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN  343 (418)
T ss_pred             ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence            999999999876 5677778888888888777742221111   00      0   00000 0011110       00  


Q ss_pred             -CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          255 -PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       255 -~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                       .........+..+.+|+.+||..||.+|+|++++|.||||..
T Consensus       344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence             111112234568999999999999999999999999999984

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=3e-37  Score=277.77  Aligned_cols=243  Identities=40%  Similarity=0.628  Sum_probs=199.7

Q ss_pred             CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-CHHHHHH
Q 015948           24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIR  102 (397)
Q Consensus        24 ~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~~~  102 (397)
                      +||.||+|.+..+|+.+|+|++........ ...+.+|+..+++++|+||+++++.+......++++||+++ +|...+.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~   79 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK   79 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence            589999999998999999999875543221 45677899999999999999999999999999999999996 8888877


Q ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhc
Q 015948          103 NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL  182 (397)
Q Consensus       103 ~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~  182 (397)
                      .... ++...+..++.+++.++.+||+.|++|+||+|.||+++.++.++|+|||.+....... ......++..|++||.
T Consensus        80 ~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~  157 (244)
T smart00220       80 KRGR-LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEV  157 (244)
T ss_pred             hccC-CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHH
Confidence            6543 8999999999999999999999999999999999999999999999999998875432 3445667778999999


Q ss_pred             ccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCC
Q 015948          183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPS  262 (397)
Q Consensus       183 l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (397)
                      +.+ ..++.++|+||||+++|+|++|..||....+..........   .....                     ......
T Consensus       158 ~~~-~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~---~~~~~---------------------~~~~~~  212 (244)
T smart00220      158 LLG-KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK---PKPPF---------------------PPPEWK  212 (244)
T ss_pred             Hcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc---cCCCC---------------------cccccc
Confidence            875 55788999999999999999999999874444333332221   11000                     000111


Q ss_pred             CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          263 ASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       263 ~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ++.++.+++.+||..+|++||++.++++||||
T Consensus       213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      213 ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            47899999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-38  Score=298.75  Aligned_cols=247  Identities=26%  Similarity=0.384  Sum_probs=204.1

Q ss_pred             ceeeeeeeeecCcEEEEEEEECC--CC--cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTK--TG--QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~--~~--~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++.+.||.|.||.||+|....  .|  -.||||.-+..... ...+.|+.|..+|+.+.|||||++++.+.+ ...+|
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi  467 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-DDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI  467 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-hhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence            34456789999999999997542  23  35899987765443 346789999999999999999999999954 56899


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||.+. |.|..++......++......|++||+.||.|||++++|||||-..|||+.+..-+||+|||+++.+.+....
T Consensus       468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY  547 (974)
T KOG4257|consen  468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY  547 (974)
T ss_pred             EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence            999999 9999999998888999999999999999999999999999999999999999989999999999988665432


Q ss_pred             ccc-cccCceeeChhcccCccCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 FTH-QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 ~~~-~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ... .-...-|||||.+.= ..++.++|||.|||++||++ .|..||.+-.+.+.+..+-++-.                
T Consensus       548 kaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR----------------  610 (974)
T KOG4257|consen  548 KASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER----------------  610 (974)
T ss_pred             hccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC----------------
Confidence            222 112345999999853 67999999999999999987 49999999888777666544321                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL  289 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l  289 (397)
                                 ...++.+++.+..|+.+||.+||.+||...|+.
T Consensus       611 -----------lP~P~nCPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  611 -----------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             -----------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence                       133456789999999999999999999987754

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-38  Score=294.53  Aligned_cols=257  Identities=25%  Similarity=0.312  Sum_probs=209.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+...+.++||+|-||.|.+|.-. .+..||+|.++....... ...+.+|+++|.+|+|||||+++++|..++.+++|+
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~-r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~  614 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNA-RNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT  614 (807)
T ss_pred             hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhH-HHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence            567889999999999999999753 368999999986654432 446889999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948           91 EFME-TDLETVIRNTNIFL-SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l-~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-  167 (397)
                      ||++ |+|.+++.+...+. .-.....++.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++.+-+.+.. 
T Consensus       615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~  694 (807)
T KOG1094|consen  615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR  694 (807)
T ss_pred             HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence            9999 89999998874433 44556679999999999999999999999999999999999999999999976444322 


Q ss_pred             -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH--hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                       -...+....|||+|.+.. ..++.++|+|+||+++||++  +...||...++.+..+..-..+.......+        
T Consensus       695 vqgr~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~--------  765 (807)
T KOG1094|consen  695 VQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV--------  765 (807)
T ss_pred             eecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee--------
Confidence             222344566999999876 45899999999999999986  467888888887777666554443322221        


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                  ..-++.++..+.+|+.+|+..|-++||+.+++..
T Consensus       766 ------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  766 ------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             ------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence                        1223345788999999999999999999999854

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-38  Score=299.33  Aligned_cols=249  Identities=26%  Similarity=0.384  Sum_probs=208.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC-Cc--EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT-GQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++..+.++||+|+||+|++|.++.. |+  .||||+++...... .-..|++|+.+|.+|+|+|+++||+...+ ..+.
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m  186 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM  186 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence            56677889999999999999987653 33  68999998765443 44578999999999999999999999876 6788


Q ss_pred             EEEEccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           88 LVFEFME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      +|||+++ |+|++.+++ ....|-......|+.||+.|+.||.++++|||||-..|||+-....|||||||+.+.++...
T Consensus       187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE  266 (1039)
T ss_pred             HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence            9999999 899999988 45568889999999999999999999999999999999999999999999999999887655


Q ss_pred             Ccccccc---cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 RRFTHQV---FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~~~~~~~---~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ..+...-   -...|.|||.|.. ..++.++|+|++||++|||++ |..||.|-...+++.+|-+.-....         
T Consensus       267 d~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpR---------  336 (1039)
T KOG0199|consen  267 DMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPR---------  336 (1039)
T ss_pred             cceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCC---------
Confidence            4432111   1234999999976 569999999999999999997 7899999999988888753322222         


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL  289 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l  289 (397)
                                        .+.+|.++.+++..||..+|++|||+..|.
T Consensus       337 ------------------Pk~csedIY~imk~cWah~paDRptFsair  366 (1039)
T KOG0199|consen  337 ------------------PKYCSEDIYQIMKNCWAHNPADRPTFSAIR  366 (1039)
T ss_pred             ------------------CCCChHHHHHHHHHhccCCccccccHHHHH
Confidence                              223489999999999999999999998875

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-38  Score=305.76  Aligned_cols=250  Identities=22%  Similarity=0.346  Sum_probs=218.8

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .-.|.++||.|.||.||+|+-+..|+   .||||.++.. ..+.....|+.|+.||-+++||||++|.+......-+.||
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi  708 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII  708 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence            35788999999999999999877664   6999998765 4456677899999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Cc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~  167 (397)
                      .|||+ |.|..++++.++.|+.-+...+++.|+.|++||-++|+|||||-..||||+.+-.||++|||+++.+.+.. ..
T Consensus       709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~  788 (996)
T KOG0196|consen  709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA  788 (996)
T ss_pred             hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence            99999 89999999999999999999999999999999999999999999999999999999999999999875444 22


Q ss_pred             ccccccC--ceeeChhcccCccCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          168 FTHQVFA--RWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       168 ~~~~~~t--~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      +++.-|.  ..|.|||.+.- ..++.++||||+|+++||.+ .|.-|+-..++.+.+..|.+.+..++|-+         
T Consensus       789 ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmD---------  858 (996)
T KOG0196|consen  789 YTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMD---------  858 (996)
T ss_pred             ccccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCC---------
Confidence            3333332  35999999976 56899999999999999977 58888889999999999988877665543         


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                        .+..+-.|+..|+++|-.+||...||+.+
T Consensus       859 ------------------CP~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  859 ------------------CPAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             ------------------CcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence                              36789999999999999999999999863

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-37  Score=292.91  Aligned_cols=245  Identities=24%  Similarity=0.381  Sum_probs=207.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .+....++||-|.||.||.|.+++..-.||||.++-..   -..+.|+.|..+|+.++|||+|+|++.|..+..+|||.|
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE  343 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE  343 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence            34567889999999999999999999999999986432   234578899999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FME-TDLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~-l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||. |+|++++++++.. ++.-...+++.||..|+.||..+++|||||-..|.|+.++..+||+|||+++.+....  ++
T Consensus       344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT--YT  421 (1157)
T KOG4278|consen  344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT--YT  421 (1157)
T ss_pred             cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc--ee
Confidence            998 9999999998754 5555667888899999999999999999999999999999999999999999874322  22


Q ss_pred             cccc---CceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          170 HQVF---ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       170 ~~~~---t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ...|   ..-|.|||.|.- ..++.++|||+|||+|||+.| |-.|+.+-+-..++..+-+.+....|+           
T Consensus       422 AHAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~Pe-----------  489 (1157)
T KOG4278|consen  422 AHAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPE-----------  489 (1157)
T ss_pred             cccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCC-----------
Confidence            2222   344999999854 568999999999999999987 889999988777777766665544443           


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL  289 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l  289 (397)
                                      ++++.+..|+..||+++|.+||+.+|+-
T Consensus       490 ----------------GCPpkVYeLMraCW~WsPsDRPsFaeiH  517 (1157)
T KOG4278|consen  490 ----------------GCPPKVYELMRACWNWSPSDRPSFAEIH  517 (1157)
T ss_pred             ----------------CCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence                            3478999999999999999999998864

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-38  Score=301.44  Aligned_cols=261  Identities=27%  Similarity=0.389  Sum_probs=217.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+...+|+|.||.||+|+++.+++..|+|+++......  ...+.+|+-+++.++|||||.+++.|.....++++|
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd--~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD--FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc--ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            688999999999999999999999999999999998654322  234567999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      |||+|+.++.+....+++++.++..+++..+.||+|||++|-+|||||-.|||+++.|.+|++|||.+..++..-.....
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks  171 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS  171 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence            99998777777767778999999999999999999999999999999999999999999999999999888776667778


Q ss_pred             cccCceeeChhcc--cCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          171 QVFARWYRAPELL--FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       171 ~~~t~~y~aPE~l--~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      .+||++|||||+-  .....|+..+|||++|+...|+---++|...-.....+..+-+. + ..|...            
T Consensus       172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS-~-~qpp~l------------  237 (829)
T KOG0576|consen  172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS-G-FQPPTL------------  237 (829)
T ss_pred             ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc-C-CCCCcc------------
Confidence            9999999999995  22346999999999999999999888775444333333322221 1 111111            


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                               .-....++.+-+|++.+|.++|++||+++.+|.|||.+.
T Consensus       238 ---------kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  238 ---------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             ---------cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence                     111233788999999999999999999999999999864

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=6.7e-36  Score=320.91  Aligned_cols=253  Identities=22%  Similarity=0.312  Sum_probs=188.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+.|...+.||+|+||.||+|++..++..||+|.+.....      ....|++++++++|||||++++++.+.+..|+||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~  762 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH  762 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence            4567778899999999999999999999999998864322      1235789999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH---hCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH---KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      ||++ |+|.+++..    +++..+..++.||+.||+|||   +.+|+||||||+||+++.++..++. ||.+......  
T Consensus       763 Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--  835 (968)
T PLN00113        763 EYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--  835 (968)
T ss_pred             eCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence            9998 578777753    788999999999999999999   6799999999999999998888775 6665443221  


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHH-hCCCCCCCCCCCCCCcc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAA-FGTATPSQWPDLAYLPD  244 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~-~~~~~~~~~~~~~~~~~  244 (397)
                        ....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+...... ........|.+...   
T Consensus       836 --~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  909 (968)
T PLN00113        836 --TKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSI---  909 (968)
T ss_pred             --CCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccc---
Confidence              23367888999999876 56899999999999999999999998543211 111111111 00000001100000   


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                            ...   .........++.+++.+|++.||++|||+.|+++.
T Consensus       910 ------~~~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        910 ------RGD---VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             ------cCC---CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence                  000   00000112457789999999999999999999874

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-37  Score=289.36  Aligned_cols=200  Identities=30%  Similarity=0.378  Sum_probs=176.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------ccchHHHHHHHHHhcC---CCCeeEEEeeee
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELK---SPHIIELIDAFP   81 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------~~~~~~~E~~~l~~l~---hp~iv~l~~~~~   81 (397)
                      ...|...+.||.|+||.|++|.++.+...|+||.|.+.+.-..      ..-.+--||+||..|+   |+||++++++|+
T Consensus       560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE  639 (772)
T KOG1152|consen  560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE  639 (772)
T ss_pred             cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence            3459999999999999999999999999999999988753222      2223346999999997   999999999999


Q ss_pred             cCCeEEEEEEccc-c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           82 HKGNLHLVFEFME-T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        82 ~~~~~~lv~e~~~-g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      +++++||+||--+ | ||.++|... ..++|.+++.|++|+..|+++||++||||||||-+|++++.+|-+||+|||.|.
T Consensus       640 ddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa  718 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAA  718 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchh
Confidence            9999999999987 5 888888754 459999999999999999999999999999999999999999999999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQ  213 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~  213 (397)
                      ...+  ..+...+||..|.|||++.|.++.+..-|||+||++||.++....||.
T Consensus       719 ~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  719 YTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             hhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            7643  456778899999999999998888999999999999999998877764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-37  Score=269.02  Aligned_cols=259  Identities=27%  Similarity=0.370  Sum_probs=203.0

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEe-eeecCCeE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELID-AFPHKGNL   86 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~-~~~~~~~~   86 (397)
                      .+.+.|.|.+.||+|.||.+-+|+|+.++..+++|.+......   ...+.+|..---.|+ |.||+.-|+ +|+..+.+
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt---~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y   97 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT---QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY   97 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh---HHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence            3689999999999999999999999999999999998754332   335667777655564 799998876 58999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc--CCcEEEeeeccceeeCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGS  163 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~--~~~~kl~DFG~a~~~~~  163 (397)
                      ++++||++ |+|..-+...+  +.|...+.++.|++.|++|||++++||||||.+||||-.  ..++||||||..+..+.
T Consensus        98 vF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~  175 (378)
T KOG1345|consen   98 VFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT  175 (378)
T ss_pred             EEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence            99999999 89998887654  889999999999999999999999999999999999953  35799999999987655


Q ss_pred             CCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          164 PDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .-.... .  +..|.+||++..    .-...+.+|+|.||+++|.+++|.+||+...-.+                    
T Consensus       176 tV~~~~-~--~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d--------------------  232 (378)
T KOG1345|consen  176 TVKYLE-Y--VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD--------------------  232 (378)
T ss_pred             eehhhh-h--hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC--------------------
Confidence            332221 1  223999998743    2235788999999999999999999998543211                    


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCC---CCHHHHhcCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR---ITAQQALEHRYFS  295 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R---~t~~e~l~hp~~~  295 (397)
                      ..+-.+..+.....+.+...|..+|+.+..+.++-|..++++|   .++..-....|..
T Consensus       233 ~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  233 KPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             chHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence            1112222333444555667777889999999999999999999   5666666666653

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-37  Score=300.23  Aligned_cols=247  Identities=29%  Similarity=0.430  Sum_probs=191.0

Q ss_pred             eeeeeeecCcEE-EEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           16 KREVLGEGTYGV-VYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        16 i~~~LG~G~~g~-Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      -.+.+|.|+-|+ ||+|  ...|+.||||.+-..     ....+.+|+..|+.- .|||||++++.-.+.+++||..|.|
T Consensus       513 ~~eilG~Gs~Gt~Vf~G--~ye~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRG--VYEGREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             cHHHcccCCCCcEEEEE--eeCCceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            356788887764 6888  456889999987432     233567899999987 6999999999999999999999999


Q ss_pred             ccCHHHHHHhc--CCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---C--CcEEEeeeccceeeCCCC
Q 015948           94 ETDLETVIRNT--NIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---H--GQLKLADFGLARIFGSPD  165 (397)
Q Consensus        94 ~g~L~~~~~~~--~~~-l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~--~~~kl~DFG~a~~~~~~~  165 (397)
                      ..+|.+++...  ... ......+.++.|++.||++||+.+||||||||.||||+.   +  .+++|+|||+++.+....
T Consensus       586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~  665 (903)
T KOG1027|consen  586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK  665 (903)
T ss_pred             hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence            99999999874  111 111445789999999999999999999999999999986   3  468999999999886544


Q ss_pred             C---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 R---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .   ......||.+|+|||++.... -..++|||||||++|+.++| ..||...-..  -..|+...        ..   
T Consensus       666 sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~--------~~---  731 (903)
T KOG1027|consen  666 SSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGN--------YT---  731 (903)
T ss_pred             chhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCc--------cc---
Confidence            3   344566889999999997744 46799999999999999875 7888755322  12222210        00   


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                    +..+-+....++.|||.+||..+|..||+|.++|.||+|.+.
T Consensus       732 --------------L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  732 --------------LVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             --------------eeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence                          001111112289999999999999999999999999999753

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-36  Score=252.40  Aligned_cols=214  Identities=27%  Similarity=0.416  Sum_probs=176.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      +.......||+|++|.|-+.++..+|...|+|.++.... .....+.++|+++..+. .+|++|.+|+.+...+.+++.|
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM  124 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM  124 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence            445567889999999999999999999999999976543 22333566788876655 6899999999999999999999


Q ss_pred             EccccCHHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           91 EFMETDLETVI---RNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        91 e~~~g~L~~~~---~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      |.|..+|..+.   .+.+..++|..+-.++..++.||.|||++ .++|||+||+||||+.+|++|+||||++-.+.+.- 
T Consensus       125 E~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi-  203 (282)
T KOG0984|consen  125 ELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI-  203 (282)
T ss_pred             HHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh-
Confidence            99998766554   34577799999999999999999999987 79999999999999999999999999998764422 


Q ss_pred             cccccccCceeeChhcccC---ccCCCCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHH
Q 015948          167 RFTHQVFARWYRAPELLFG---AKQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAA  227 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~  227 (397)
                      ..+...|...|||||.+..   .+.|+-++||||||++++||.+++.|+..- +..+++.++.+.
T Consensus       204 Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee  268 (282)
T KOG0984|consen  204 AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE  268 (282)
T ss_pred             HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence            2223455566999999843   347999999999999999999999888754 567888777653

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-34  Score=292.32  Aligned_cols=250  Identities=28%  Similarity=0.418  Sum_probs=203.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEEC---C----CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDT---K----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK   83 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~---~----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~   83 (397)
                      ++..+.+.||+|+||.|++|.-.   .    ....||||.++..... .....+..|+++|+.+ .|+||+.+++++...
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~  374 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQD  374 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence            34467779999999999999632   1    1457999998766554 5566788999999998 599999999999999


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC
Q 015948           84 GNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH  147 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~  147 (397)
                      +.+++|+|||. |+|+.+++...               ..++......+++||+.|++||+++.++||||-..||||..+
T Consensus       375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~  454 (609)
T KOG0200|consen  375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN  454 (609)
T ss_pred             CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC
Confidence            99999999999 89999998876               348889999999999999999999999999999999999999


Q ss_pred             CcEEEeeeccceeeCCCCCcc-ccccc--CceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCC-cHHHHH
Q 015948          148 GQLKLADFGLARIFGSPDRRF-THQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSS-DIDQLG  222 (397)
Q Consensus       148 ~~~kl~DFG~a~~~~~~~~~~-~~~~~--t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~-~~~~~~  222 (397)
                      ..+||+|||+|+......... ....+  ...|||||.+.. ..|+.++||||+|++|||+++ |..|+.+-. ..+.+.
T Consensus       455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~  533 (609)
T KOG0200|consen  455 KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE  533 (609)
T ss_pred             CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH
Confidence            999999999999654433222 22222  223999999987 679999999999999999987 889998855 444444


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .+..+.....|                           ...++++.+++..|++.+|++||+..++.+
T Consensus       534 ~l~~G~r~~~P---------------------------~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  534 FLKEGNRMEQP---------------------------EHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HHhcCCCCCCC---------------------------CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            34333222221                           234889999999999999999999999875

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-34  Score=264.19  Aligned_cols=193  Identities=28%  Similarity=0.356  Sum_probs=159.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHH--hcCCCCeeEEEeeeecCC----
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK--ELKSPHIIELIDAFPHKG----   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~--~l~hp~iv~l~~~~~~~~----   84 (397)
                      .....+.+.||+|.||.||+|.  -+++.||||++....     .+.+..|.+|.+  .++|+||++++++-+...    
T Consensus       209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~~-----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~  281 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQE-----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM  281 (534)
T ss_pred             CCchhhHHHhhcCccceeehhh--ccCceeEEEecCHHH-----HHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence            3456778899999999999995  457999999976432     334555666655  568999999998876555    


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh---------CCccccCCCCCcEEEccCCcEEEee
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK---------KWVLHRDMKPNNLLIGSHGQLKLAD  154 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~---------~~ivHrDlkp~NILl~~~~~~kl~D  154 (397)
                      .++||++|.+ |+|.+++...-  ++......++..+++||+|||+         ..|+|||||..||||..|+++-|+|
T Consensus       282 eywLVt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD  359 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD  359 (534)
T ss_pred             ceeEEeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence            7999999998 88988888654  8999999999999999999995         3599999999999999999999999


Q ss_pred             eccceeeCCC--CCcccccccCceeeChhcccCccCCC-----CcchHHHHHHHHHHHHhCCCCC
Q 015948          155 FGLARIFGSP--DRRFTHQVFARWYRAPELLFGAKQYG-----AGVDVWAAGCIFAELLNRRPFL  212 (397)
Q Consensus       155 FG~a~~~~~~--~~~~~~~~~t~~y~aPE~l~~~~~~~-----~~~DiwSlG~il~ell~g~~pf  212 (397)
                      ||+|..+...  ......++||..|||||+|.+.....     .+.||||+|.+||||+++...+
T Consensus       360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~  424 (534)
T KOG3653|consen  360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDA  424 (534)
T ss_pred             cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            9999987532  33455689999999999998765554     4689999999999999876544

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-34  Score=279.43  Aligned_cols=247  Identities=24%  Similarity=0.340  Sum_probs=204.8

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .+..++||+|+||+||+|.+...|+    .||||++.... .......+++|+-+|.++.|||+++|++.+.... +.||
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence            4557889999999999998866665    57888776433 2334557889999999999999999999997766 8899


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ++|++ |.|+++++.....+..+....|+.||++|+.|||.++++||||-..||||.+-..+||.|||+|+.+......+
T Consensus       776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            99999 79999999988889999999999999999999999999999999999999999999999999999887766665


Q ss_pred             cccccC--ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          169 THQVFA--RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       169 ~~~~~t--~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ....|.  +-|||-|.+.. ..|+.++|||||||++||++| |..|+.+....++-..+..+..                
T Consensus       856 ~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR----------------  918 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER----------------  918 (1177)
T ss_pred             cccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc----------------
Confidence            555553  34888888865 669999999999999999986 8889888765554333222111                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 -.-+|..+-++.-++.+||..|+..||+++++..
T Consensus       919 -----------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  919 -----------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             -----------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence                       1223456889999999999999999999988754

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=100.00  E-value=1.1e-32  Score=241.96  Aligned_cols=213  Identities=39%  Similarity=0.649  Sum_probs=184.2

Q ss_pred             eeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHH
Q 015948           20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLE   98 (397)
Q Consensus        20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~   98 (397)
                      ||+|++|.||++.+..+++.+++|++....... ....+.+|+..++.++|++|+++++++......++++||++ ++|.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   79 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK   79 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence            689999999999998889999999987544321 23467899999999999999999999999999999999999 6888


Q ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCCCCCcccccccCcee
Q 015948           99 TVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFTHQVFARWY  177 (397)
Q Consensus        99 ~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y  177 (397)
                      .++......++...+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+..............+...|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  159 (215)
T cd00180          80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY  159 (215)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCc
Confidence            887765345899999999999999999999999999999999999999 8999999999998765543223345566779


Q ss_pred             eChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcc
Q 015948          178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR  257 (397)
Q Consensus       178 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (397)
                      ++||.+.....++.+.|+|+||+++++|                                                    
T Consensus       160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------------  187 (215)
T cd00180         160 MAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------------  187 (215)
T ss_pred             cChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------------
Confidence            9999986643688999999999999999                                                    


Q ss_pred             ccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCC
Q 015948          258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEHR  292 (397)
Q Consensus       258 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp  292 (397)
                             ..+.+++.+||..||.+||++.++++|+
T Consensus       188 -------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                   1477899999999999999999999874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-33  Score=254.23  Aligned_cols=252  Identities=23%  Similarity=0.351  Sum_probs=185.0

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHH--hcCCCCeeEEEeeeecC--
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK--ELKSPHIIELIDAFPHK--   83 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~--~l~hp~iv~l~~~~~~~--   83 (397)
                      ..+..+-++++.||+|.||.||+|.+  .|+.||||++....     ....++|.+|..  -|+|+||+.++++-..+  
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g  279 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDNG  279 (513)
T ss_pred             HhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence            34688899999999999999999955  58999999986322     224456666655  46999999998875332  


Q ss_pred             --CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-----C---CccccCCCCCcEEEccCCcEEE
Q 015948           84 --GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-----K---WVLHRDMKPNNLLIGSHGQLKL  152 (397)
Q Consensus        84 --~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-----~---~ivHrDlkp~NILl~~~~~~kl  152 (397)
                        .+++||.+|.+ |+|.+++...  .++-+....++..++.||++||.     +   .|.|||||..||||..+|.+-|
T Consensus       280 s~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I  357 (513)
T KOG2052|consen  280 SWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  357 (513)
T ss_pred             ceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence              27999999999 8999999874  38999999999999999999994     2   3999999999999999999999


Q ss_pred             eeeccceeeCCCC----CcccccccCceeeChhcccCccCC-----CCcchHHHHHHHHHHHHh-----C-----CCCCC
Q 015948          153 ADFGLARIFGSPD----RRFTHQVFARWYRAPELLFGAKQY-----GAGVDVWAAGCIFAELLN-----R-----RPFLQ  213 (397)
Q Consensus       153 ~DFG~a~~~~~~~----~~~~~~~~t~~y~aPE~l~~~~~~-----~~~~DiwSlG~il~ell~-----g-----~~pf~  213 (397)
                      +|+|+|.......    ......+||-.|||||+|....+.     -..+||||||.++||++-     |     ++||.
T Consensus       358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy  437 (513)
T KOG2052|consen  358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY  437 (513)
T ss_pred             eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence            9999998765442    345678999999999999653321     246899999999999872     2     34554


Q ss_pred             CCC----cHHHHHHHH--HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHH
Q 015948          214 GSS----DIDQLGKIF--AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ  287 (397)
Q Consensus       214 ~~~----~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e  287 (397)
                      +--    ..+.+.+++  +.+....|..|....                      .-..+..+++.|+..||.-|.|+-.
T Consensus       438 d~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~----------------------~l~~m~klMkeCW~~Np~aRltALr  495 (513)
T KOG2052|consen  438 DVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDP----------------------ALRVMAKLMKECWYANPAARLTALR  495 (513)
T ss_pred             cCCCCCCCHHHHhcceeecccCCCCCcccccCH----------------------HHHHHHHHHHHhhcCCchhhhHHHH
Confidence            321    122222211  111111122221110                      0124567899999999999999866


Q ss_pred             Hhc
Q 015948          288 ALE  290 (397)
Q Consensus       288 ~l~  290 (397)
                      +.+
T Consensus       496 iKK  498 (513)
T KOG2052|consen  496 IKK  498 (513)
T ss_pred             HHH
Confidence            643

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1e-33  Score=296.90  Aligned_cols=202  Identities=14%  Similarity=0.202  Sum_probs=150.3

Q ss_pred             HHhcCC-CCeeEEEeee-------ecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccC
Q 015948           65 LKELKS-PHIIELIDAF-------PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD  136 (397)
Q Consensus        65 l~~l~h-p~iv~l~~~~-------~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrD  136 (397)
                      .+.++| .||++++++|       .+...++++|||++++|..++......+++..++.|++||+.||+|||++||+|||
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD  105 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN  105 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            345556 6888888888       33346788899999999999987666699999999999999999999999999999


Q ss_pred             CCCCcEEEccCC-------------------cEEEeeeccceeeCCCC----------------CcccccccCceeeChh
Q 015948          137 MKPNNLLIGSHG-------------------QLKLADFGLARIFGSPD----------------RRFTHQVFARWYRAPE  181 (397)
Q Consensus       137 lkp~NILl~~~~-------------------~~kl~DFG~a~~~~~~~----------------~~~~~~~~t~~y~aPE  181 (397)
                      |||+||||+..|                   .+||+|||+++......                ......++|++|||||
T Consensus       106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE  185 (793)
T PLN00181        106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE  185 (793)
T ss_pred             CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence            999999996544                   45566666655321100                0011246789999999


Q ss_pred             cccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCC
Q 015948          182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP  261 (397)
Q Consensus       182 ~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (397)
                      ++.+ ..|+.++|||||||+||||++|.+++....  ..+..+....   .+..                        ..
T Consensus       186 ~~~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~---~~~~------------------------~~  235 (793)
T PLN00181        186 EDNG-SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV---LPPQ------------------------IL  235 (793)
T ss_pred             hhcc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh---cChh------------------------hh
Confidence            9977 568999999999999999999988865322  1122221110   0000                        00


Q ss_pred             CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          262 SASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       262 ~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ...+...+++.+||..||.+||++.|+++||||..
T Consensus       236 ~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        236 LNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             hcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            11356778999999999999999999999999975

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=100.00  E-value=9.3e-32  Score=239.59  Aligned_cols=204  Identities=38%  Similarity=0.598  Sum_probs=174.4

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      |.+.+.||+|++|+||++.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++++......++++||+
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC   79 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence            67889999999999999999988999999998765433 13446778999999999999999999999999999999999


Q ss_pred             cc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Cccccc
Q 015948           94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQ  171 (397)
Q Consensus        94 ~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~~~~  171 (397)
                      ++ +|.+.+......+++..+..++.+++.+|.+||++|++|+||+|.||+++.++.++|+|||.+....... ......
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (225)
T smart00221       80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV  159 (225)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence            96 8888887654337899999999999999999999999999999999999999999999999998875432 122345


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCC-CCcH
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG-SSDI  218 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~-~~~~  218 (397)
                      .++..|++||.+.+...++.++|+||||+++|+|++|++||.. .++.
T Consensus       160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~  207 (225)
T smart00221      160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFT  207 (225)
T ss_pred             eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhH
Confidence            5677799999984445677899999999999999999999977 4444

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.8e-31  Score=266.94  Aligned_cols=269  Identities=26%  Similarity=0.376  Sum_probs=207.5

Q ss_pred             hcce-eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecC----CccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG----KQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y-~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~----~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .+.| .....+|.|++|.|+.+......+.++.|..+..    .........+..|+-+-..|.|+|++..++.+.+...
T Consensus       316 ~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~  395 (601)
T KOG0590|consen  316 SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG  395 (601)
T ss_pred             ccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc
Confidence            4556 5678899999999999988877777777766521    1111122224567778888899999998888777666


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      .+-+||||++||..++... +.++..++..++.||+.||+|||++||.||||||+|+++..+|.+||+|||.+..+..+.
T Consensus       396 ~~~~mE~~~~Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  396 ILQSMEYCPYDLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW  474 (601)
T ss_pred             chhhhhcccHHHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence            6666999999887777764 458999999999999999999999999999999999999999999999999998775443


Q ss_pred             ----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 ----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                          ......+|+..|+|||++.+.......+||||.|++++.|++|+.||......+....-                 
T Consensus       475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~-----------------  537 (601)
T KOG0590|consen  475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT-----------------  537 (601)
T ss_pred             chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh-----------------
Confidence                33556778888999999988665567789999999999999999999765443321100                 


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                        ...............+...++...+.+|.+||+.||.+|.|+++|++.+||+....
T Consensus       538 --~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~  593 (601)
T KOG0590|consen  538 --NNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC  593 (601)
T ss_pred             --hccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence              00000111112223444556788999999999999999999999999999987543

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.97  E-value=4.9e-30  Score=220.51  Aligned_cols=166  Identities=21%  Similarity=0.274  Sum_probs=130.4

Q ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      |+|.+++.+.+..+++..++.++.||+.||.|||+++      ||+|||++.++.+|+  ||+++......     ..|+
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~   67 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVD   67 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecccc-----CCCc
Confidence            6888888876667999999999999999999999999      999999999999999  99998764432     2678


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA  253 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (397)
                      +.|+|||++.+ ..|+.++|||||||++|||++|.+||...... ..+..+........+..                  
T Consensus        68 ~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------  128 (176)
T smart00750       68 PYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD------------------  128 (176)
T ss_pred             ccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc------------------
Confidence            89999999977 56899999999999999999999999765443 23333332211110000                  


Q ss_pred             CCccccCCCCCH--HHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          254 PPLRSLFPSASD--DALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       254 ~~~~~~~~~~s~--~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                         ......++.  .+++||.+||..||.+||++.|+++|+|+.
T Consensus       129 ---~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      129 ---RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             ---cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence               000011233  699999999999999999999999999864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-29  Score=228.25  Aligned_cols=251  Identities=18%  Similarity=0.244  Sum_probs=196.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC-----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee-ecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF-PHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-~~~~   84 (397)
                      .+|+++...+-+|.||.||.|+++...     +.+-+|.++.... +-+...++.|--+|..+.|||+..+.+.. ++..
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS-~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~  361 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS-QIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA  361 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc-HHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence            578889999999999999999765432     3355665543322 22233566788888999999999998875 4566


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC-----C--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948           85 NLHLVFEFME-TDLETVIRNTN-----I--FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~-----~--~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                      ..+.++.+++ |+|..++....     .  .++-.+...++.|++.|++|||++|+||.||-..|.+|++.-++||+|=.
T Consensus       362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsa  441 (563)
T KOG1024|consen  362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSA  441 (563)
T ss_pred             cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccch
Confidence            7888899999 89999988332     1  26667778899999999999999999999999999999999999999999


Q ss_pred             cceeeCCCCCcccccc--cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948          157 LARIFGSPDRRFTHQV--FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATP  233 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~--~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~  233 (397)
                      +++.+...+...-..-  ...-|||||.+.. ..|+.++|+|||||++|||+| |+.|+..-+..+...-+..+.....|
T Consensus       442 LSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP  520 (563)
T KOG1024|consen  442 LSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQP  520 (563)
T ss_pred             hccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCC
Confidence            9998755443221111  1234999999977 679999999999999999997 88998888777776666554332222


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      -                           ++++++..++.-||..+|++||+.+|+..
T Consensus       521 ~---------------------------NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  521 F---------------------------NCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             C---------------------------CCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            2                           34789999999999999999999999864

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=7.2e-29  Score=233.56  Aligned_cols=168  Identities=23%  Similarity=0.327  Sum_probs=130.1

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCc---cCCccchHHHHHHHHHhcCCCCeeE-EEeeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIE-LIDAFP   81 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~-l~~~~~   81 (397)
                      ...+.++|.+.+.||+|+||+||+|++.. +++.+|||++.....   .......+.+|+.+|+.++|+||+. +++.  
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--   90 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--   90 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence            34578999999999999999999999876 678889998753311   1122345789999999999999985 4432  


Q ss_pred             cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCC-CCCcEEEccCCcEEEeeecccee
Q 015948           82 HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM-KPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        82 ~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDl-kp~NILl~~~~~~kl~DFG~a~~  160 (397)
                        +..|+|||||+|..+..+..    ..   ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+.
T Consensus        91 --~~~~LVmE~~~G~~L~~~~~----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~  161 (365)
T PRK09188         91 --GKDGLVRGWTEGVPLHLARP----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV  161 (365)
T ss_pred             --CCcEEEEEccCCCCHHHhCc----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence              45799999999754443221    11   1468899999999999999999999 99999999999999999999997


Q ss_pred             eCCCCC--------cccccccCceeeChhcccC
Q 015948          161 FGSPDR--------RFTHQVFARWYRAPELLFG  185 (397)
Q Consensus       161 ~~~~~~--------~~~~~~~t~~y~aPE~l~~  185 (397)
                      +.....        ..++.++++.|+|||.+..
T Consensus       162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             cccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            654321        1235566777999999843

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.96  E-value=2.9e-27  Score=221.53  Aligned_cols=262  Identities=33%  Similarity=0.504  Sum_probs=207.3

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCC-CeeEEEeeeecCCeEEEEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSP-HIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp-~iv~l~~~~~~~~~~~lv~e   91 (397)
                      |.+.+.||.|+||.||++.+.   ..+++|.+........ ....+.+|+.++..+.|+ +|+++++.+......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            788999999999999999887   8899999877655443 455688999999999988 79999999988888999999


Q ss_pred             cccc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCCCC-
Q 015948           92 FMET-DLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~~~-  166 (397)
                      |+.| ++...+....  ..+.+..+..++.|++.++.|+|+.|++|||+||+||+++..+ .++++|||+++....... 
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            9995 5664554433  2699999999999999999999999999999999999999988 799999999986644432 


Q ss_pred             -----cccccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHHHhCCC-CCCC
Q 015948          167 -----RFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---IDQLGKIFAAFGTA-TPSQ  235 (397)
Q Consensus       167 -----~~~~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~-~~~~  235 (397)
                           .....+++..|++||.+.+.  ..+....|+||+|++++++++|..||.....   .......+...... ....
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP  238 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence                 34677899999999999774  4788999999999999999999999887764   33333333332211 0000


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      ...                   .........+.+++..++..+|..|.+..+...++|....
T Consensus       239 ~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         239 LSP-------------------SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             cCc-------------------cccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            000                   0001223578999999999999999999999888665543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.5e-30  Score=244.80  Aligned_cols=244  Identities=27%  Similarity=0.404  Sum_probs=201.3

Q ss_pred             eeeecCcEEEEEEEE---CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEEEEccc
Q 015948           19 VLGEGTYGVVYKAID---TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      .+|.|+||.|++++.   ...|..||+|+..+.............|..++..++ ||++|++..+|+.++.+|++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            479999999999853   345778999999876654444444556888999887 9999999999999999999999999


Q ss_pred             c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948           95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF  173 (397)
Q Consensus        95 g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  173 (397)
                      | +|...+.+ ...+.+..++.+...++-+++++|+.||+|||+|++||+++.+|++++.|||+++..-.....    ||
T Consensus        81 gg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----cg  155 (612)
T KOG0603|consen   81 GGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----CG  155 (612)
T ss_pred             cchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc----cc
Confidence            6 55555544 445888999999999999999999999999999999999999999999999999876433322    88


Q ss_pred             CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948          174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA  253 (397)
Q Consensus       174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (397)
                      |..|||||++.   ....++|+||||++.|||++|..||.+    +....|...--                        
T Consensus       156 t~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~------------------------  204 (612)
T KOG0603|consen  156 TYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAEL------------------------  204 (612)
T ss_pred             chhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhcc------------------------
Confidence            99999999997   367889999999999999999999987    55566554210                        


Q ss_pred             CCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCCC
Q 015948          254 PPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~  302 (397)
                          .....++..+.+++..++..+|..|..     +.|+++|+||+...|...
T Consensus       205 ----~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l  254 (612)
T KOG0603|consen  205 ----EMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNEL  254 (612)
T ss_pred             ----CCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhH
Confidence                112345789999999999999999975     479999999998877643

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.96  E-value=4e-27  Score=221.80  Aligned_cols=252  Identities=22%  Similarity=0.234  Sum_probs=195.8

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCC-cEEEEEEeecCCccCCccchHHHHHHHHHhcCC----CCeeEEEeee-ecCCeE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS----PHIIELIDAF-PHKGNL   86 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h----p~iv~l~~~~-~~~~~~   86 (397)
                      +|.+.+.||+|+||.||+|.+..++ ..+|+|+..........  .+..|+.++..+..    .++..+++.+ ..+.+-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            8999999999999999999988775 68999987654332211  46679999999873    6999999999 588899


Q ss_pred             EEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-----CcEEEeeeccce-
Q 015948           87 HLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-----GQLKLADFGLAR-  159 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-----~~~kl~DFG~a~-  159 (397)
                      |+||+.++.+|.++..... ..++...+..++.|++.+|++||+.|++||||||+|+++...     ..+.|.|||+|+ 
T Consensus        97 ~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~  176 (322)
T KOG1164|consen   97 FIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR  176 (322)
T ss_pred             EEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence            9999999999999886654 679999999999999999999999999999999999999865     359999999998 


Q ss_pred             -eeCCCC-------Cc-ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 015948          160 -IFGSPD-------RR-FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT  230 (397)
Q Consensus       160 -~~~~~~-------~~-~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  230 (397)
                       .+....       +. .....||..|.++.+..+ ...+.+.|+||++.++.+|+.|..||.+.+.......+......
T Consensus       177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~  255 (322)
T KOG1164|consen  177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK  255 (322)
T ss_pred             ccccCCCCcccccCCCCccCCCCccccccHHHhCC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh
Confidence             321111       11 223458999999999877 56899999999999999999999999877654444333332111


Q ss_pred             CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .....                       .....+..+.++...+-..+...+|....+..
T Consensus       256 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  256 LLTDR-----------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             hcccc-----------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            10000                       11122467777777777788889998777654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=2.1e-27  Score=202.25  Aligned_cols=248  Identities=21%  Similarity=0.246  Sum_probs=197.1

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLH   87 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~   87 (397)
                      .+.++|.++++||+|+||.+|+|....+|..||||+-......    -.+..|..+.+.|++ ..|..+..++.+..+-.
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence            3588999999999999999999999999999999986544333    346679999999987 78888888888889999


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeeccceeeCCC
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGSP  164 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~a~~~~~~  164 (397)
                      +|||.++.+|.+++.-+...++...+..++-|++.-++|+|.++++||||||+|+|..-+   ..+.|+|||+|+.+-+.
T Consensus        88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~  167 (341)
T KOG1163|consen   88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI  167 (341)
T ss_pred             eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence            999999999999998887789999999999999999999999999999999999999754   45899999999876432


Q ss_pred             -------CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHHHhCCCCCC
Q 015948          165 -------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       165 -------~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~~~~~~  234 (397)
                             .+......||..|.+=-...+ ...+.+-|+-|+|.+|.++.-|..||++-.   ..+.+++|.+.-.     
T Consensus       168 ~t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~-----  241 (341)
T KOG1163|consen  168 RTRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKM-----  241 (341)
T ss_pred             cccccCccccCCccceeeeehhhhhhhh-hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhc-----
Confidence                   234556778888998777665 446788999999999999999999999864   3444555544311     


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT  284 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  284 (397)
                                        ..+...+..+.+.++.-.+..|=..--++-|.
T Consensus       242 ------------------s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pd  273 (341)
T KOG1163|consen  242 ------------------STPIEVLCKGFPAEFAMYLNYCRGLGFEEKPD  273 (341)
T ss_pred             ------------------CCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCc
Confidence                              11223334455667766676665555555554

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=3.1e-27  Score=209.74  Aligned_cols=213  Identities=23%  Similarity=0.313  Sum_probs=181.0

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~   85 (397)
                      ...+.-.|.+.++||+|+||..+.|.+..+++.||||.-.......    .+..|....+.|. .++|..+|.+.+.+-+
T Consensus        23 ~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~AP----QLrdEYr~YKlL~g~~GIP~vYYFGqeG~~   98 (449)
T KOG1165|consen   23 VLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAP----QLRDEYRTYKLLGGTEGIPQVYYFGQEGKY   98 (449)
T ss_pred             ceEecccceeccccccCcceeeecccccccCceEEEEeccccCCcc----hHHHHHHHHHHHcCCCCCCceeeeccccch
Confidence            3456789999999999999999999999999999999865433332    4557888888885 4999999988888888


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-----cEEEeeecccee
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-----QLKLADFGLARI  160 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-----~~kl~DFG~a~~  160 (397)
                      -.||+|+++.+|.+++.-++..|+...+..++.|++.-++|+|++.+|+|||||+|+||...|     .+.|+|||+|+.
T Consensus        99 NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen   99 NILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             hhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence            899999999999999998988999999999999999999999999999999999999998654     399999999998


Q ss_pred             eCCCC-------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHH
Q 015948          161 FGSPD-------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKI  224 (397)
Q Consensus       161 ~~~~~-------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i  224 (397)
                      +.++.       +.-....||..||+=-..+| +.-+.+-|+-|||.+|++.|-|..||+|-.   +.+.+++|
T Consensus       179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG-rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI  251 (449)
T KOG1165|consen  179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI  251 (449)
T ss_pred             hcCccccccCccccccccccceeeeEeecccc-chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence            76554       23445678889999888887 557899999999999999999999998854   34444444

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.94  E-value=7.8e-27  Score=234.07  Aligned_cols=226  Identities=27%  Similarity=0.402  Sum_probs=175.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ...+|..++.|-.|+||.||+++|+.+.+.+|+| +.+.+.       +.|-  +|..-.+|++|               
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv---------------  135 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV---------------  135 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee---------------
Confidence            3578999999999999999999999999999995 332211       1111  33333344444               


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----  165 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----  165 (397)
                           ||....++..+ .++.+.        +.+++|||+.||+|||+||+|.||..-|++|++|||+.+......    
T Consensus       136 -----gDc~tllk~~g-~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl  201 (1205)
T KOG0606|consen  136 -----GDCATLLKNIG-PLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL  201 (1205)
T ss_pred             -----chhhhhcccCC-CCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchh
Confidence                 66666665533 354444        679999999999999999999999999999999999987532110    


Q ss_pred             -----------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          166 -----------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       166 -----------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                                 -.....+||+.|+|||+++. +.|+..+|||++|+|+||.+.|+.||.+.+.++.+..++.........
T Consensus       202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~  280 (1205)
T KOG0606|consen  202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE  280 (1205)
T ss_pred             hhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence                       11234589999999999976 679999999999999999999999999999999988887754443333


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC---CHHHHhcCCCCCCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI---TAQQALEHRYFSSAPLP  300 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~---t~~e~l~hp~~~~~~~~  300 (397)
                      .+                         .+.++++++|.++|+.+|..|.   .+-++.+|+||....|.
T Consensus       281 de-------------------------a~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  281 DE-------------------------ALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             Cc-------------------------CCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence            22                         2368999999999999999995   56788899999877665

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.94  E-value=3.1e-26  Score=198.61  Aligned_cols=143  Identities=21%  Similarity=0.179  Sum_probs=109.7

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-------c-----------------chHHHHHHHHHhcCCC
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-------N-----------------FTALREIKLLKELKSP   71 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-------~-----------------~~~~~E~~~l~~l~hp   71 (397)
                      +.+.||+|+||.||+|.+. +|+.||||+++........       .                 ....+|+.+|..+.++
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05147           1 INGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA   79 (190)
T ss_pred             CCCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence            3578999999999999987 8999999999865322111       0                 1123499999999877


Q ss_pred             CeeEEEeeeecCCeEEEEEEccccCHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCcEEEccCCc
Q 015948           72 HIIELIDAFPHKGNLHLVFEFMETDLE-TVIRNTNIFLSPADIKSYMQMTLKGLAFC-HKKWVLHRDMKPNNLLIGSHGQ  149 (397)
Q Consensus        72 ~iv~l~~~~~~~~~~~lv~e~~~g~L~-~~~~~~~~~l~~~~~~~~~~qil~aL~~l-H~~~ivHrDlkp~NILl~~~~~  149 (397)
                      ++........ .. .+|||||++|+.+ ..... ...+++..+..++.||+.+|.++ |+.||+||||||+|||++ ++.
T Consensus        80 ~v~~p~~~~~-~~-~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~  155 (190)
T cd05147          80 GIPCPEPILL-KS-HVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK  155 (190)
T ss_pred             CCCCCcEEEe-cC-CEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence            7643332222 22 3899999997533 33232 34689999999999999999999 799999999999999998 578


Q ss_pred             EEEeeeccceeeCC
Q 015948          150 LKLADFGLARIFGS  163 (397)
Q Consensus       150 ~kl~DFG~a~~~~~  163 (397)
                      ++|+|||+|.....
T Consensus       156 v~LiDFG~a~~~~~  169 (190)
T cd05147         156 LYIIDVSQSVEHDH  169 (190)
T ss_pred             EEEEEccccccCCC
Confidence            99999999986544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.93  E-value=1.1e-25  Score=197.67  Aligned_cols=175  Identities=12%  Similarity=0.096  Sum_probs=133.2

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-cch------HHHHHHHHHhcCCCCeeEEEee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFT------ALREIKLLKELKSPHIIELIDA   79 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-~~~------~~~E~~~l~~l~hp~iv~l~~~   79 (397)
                      .+.+.++|.+.+.||.|+||.||++.+  ++..+|||+++........ ...      +.+|+..+.++.|++|..+.++
T Consensus        26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~  103 (232)
T PRK10359         26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF  103 (232)
T ss_pred             HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence            456799999999999999999999754  4678999999755432221 112      4589999999999999999888


Q ss_pred             eecC--------CeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948           80 FPHK--------GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        80 ~~~~--------~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      +...        +..++||||++| +|.+.. .    +++    ....+++.+|..||+.|++|||+||+||+++.+| +
T Consensus       104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~-~----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i  173 (232)
T PRK10359        104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMP-E----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-L  173 (232)
T ss_pred             eeecccccccccCCeEEEEEEECCccHHHhh-h----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-E
Confidence            6543        358999999998 555542 1    333    2456999999999999999999999999999999 9


Q ss_pred             EEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH
Q 015948          151 KLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL  206 (397)
Q Consensus       151 kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell  206 (397)
                      +|+|||..........             -+.+.-...|+.++|+||||+++..+.
T Consensus       174 ~liDfg~~~~~~e~~a-------------~d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        174 RIIDLSGKRCTAQRKA-------------KDRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EEEECCCcccccchhh-------------HHHHHHHhHhcccccccceeEeehHHH
Confidence            9999998875422111             111212245778999999999987654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.92  E-value=5.6e-25  Score=198.82  Aligned_cols=235  Identities=21%  Similarity=0.279  Sum_probs=148.3

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-cchHHHHHHHHHhcC----------CCCeeEEEeee-
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREIKLLKELK----------SPHIIELIDAF-   80 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-~~~~~~E~~~l~~l~----------hp~iv~l~~~~-   80 (397)
                      .+...+.||.|+++.||.+.|..||+.+|+|+.......... ...+.+|.-....+.          |-.++-.+|.. 
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            467788999999999999999999999999998766532222 222333332222221          11122222221 


Q ss_pred             --------ecC---C-----eEEEEEEccccCHHHHHHh---cCCC---CCHHHHHHHHHHHHHHHHHhHhCCccccCCC
Q 015948           81 --------PHK---G-----NLHLVFEFMETDLETVIRN---TNIF---LSPADIKSYMQMTLKGLAFCHKKWVLHRDMK  138 (397)
Q Consensus        81 --------~~~---~-----~~~lv~e~~~g~L~~~~~~---~~~~---l~~~~~~~~~~qil~aL~~lH~~~ivHrDlk  138 (397)
                              ...   .     +.+++|+-+.+||..++..   ....   +....-..+..|++..+++||+.|++|+|||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence                    111   1     3478899999988776542   2211   2222234455899999999999999999999


Q ss_pred             CCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCc-------cCCCCcchHHHHHHHHHHHHhCCCC
Q 015948          139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA-------KQYGAGVDVWAAGCIFAELLNRRPF  211 (397)
Q Consensus       139 p~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~-------~~~~~~~DiwSlG~il~ell~g~~p  211 (397)
                      |+|++++.+|.+.|+||+.....+....   ....+..|.+||.....       ..++.+.|.|+||+++|.|++|..|
T Consensus       173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~---~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP  249 (288)
T PF14531_consen  173 PENFLLDQDGGVFLGDFSSLVRAGTRYR---CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP  249 (288)
T ss_dssp             GGGEEE-TTS-EEE--GGGEEETTEEEE---GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred             eeeEEEcCCCCEEEcChHHHeecCceee---ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence            9999999999999999998877544222   13334569999987432       2478899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCC
Q 015948          212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR  282 (397)
Q Consensus       212 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  282 (397)
                      |........                ++               ..+.... .+++.+++||..+|+.||.+|
T Consensus       250 f~~~~~~~~----------------~~---------------~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  250 FGLSSPEAD----------------PE---------------WDFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             TCCCGGGST----------------SG---------------GGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCCcccc----------------cc---------------ccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            875532110                00               0122333 568999999999999999988

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.92  E-value=8.8e-25  Score=190.10  Aligned_cols=143  Identities=18%  Similarity=0.171  Sum_probs=112.0

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc------------------------cchHHHHHHHHHhcCCC
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV------------------------NFTALREIKLLKELKSP   71 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~------------------------~~~~~~E~~~l~~l~hp   71 (397)
                      +.+.||+|+||.||+|.+. +|+.||||+++........                        .....+|...+.++.++
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            4678999999999999987 8999999999875321100                        11234789999999998


Q ss_pred             CeeEEEeeeecCCeEEEEEEccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCc
Q 015948           72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQ  149 (397)
Q Consensus        72 ~iv~l~~~~~~~~~~~lv~e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~  149 (397)
                      +|.....+....  .|+||||++|. +...... ...+++..+..++.|++.+|.++|+ +||+||||||+|||++ ++.
T Consensus        80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~  155 (190)
T cd05145          80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK  155 (190)
T ss_pred             CCCCceEEEecC--CEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence            875443333222  48999999975 4333222 3457889999999999999999999 9999999999999998 889


Q ss_pred             EEEeeeccceeeCC
Q 015948          150 LKLADFGLARIFGS  163 (397)
Q Consensus       150 ~kl~DFG~a~~~~~  163 (397)
                      ++|+|||+|+....
T Consensus       156 ~~liDFG~a~~~~~  169 (190)
T cd05145         156 PYIIDVSQAVELDH  169 (190)
T ss_pred             EEEEEcccceecCC
Confidence            99999999987644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=2.6e-24  Score=185.01  Aligned_cols=188  Identities=18%  Similarity=0.134  Sum_probs=137.7

Q ss_pred             eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC--ccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEEEEEE
Q 015948           15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--VNFTALREIKLLKELKS-PHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~--~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~e   91 (397)
                      .+...|++|+||+||++..  .+..++.+.+........  ....+.+|+++|++|.| ++|++++++    +..|++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            4678899999999998854  677888776654433111  12246789999999965 889999886    34699999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCC-CCCcEEEccCCcEEEeeeccceeeCCCCCc---
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM-KPNNLLIGSHGQLKLADFGLARIFGSPDRR---  167 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDl-kp~NILl~~~~~~kl~DFG~a~~~~~~~~~---  167 (397)
                      |+.|..+.....      .. ...++.|++.+|++||++||+|||| ||+|||++.+|.++|+|||+|.........   
T Consensus        79 yI~G~~L~~~~~------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~  151 (218)
T PRK12274         79 YLAGAAMYQRPP------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL  151 (218)
T ss_pred             eecCccHHhhhh------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence            999854432211      11 2357889999999999999999999 799999999999999999999865443321   


Q ss_pred             ----------ccccccCceeeChhcccCccCCC-CcchHHHHHHHHHHHHhCCCCCCCC
Q 015948          168 ----------FTHQVFARWYRAPELLFGAKQYG-AGVDVWAAGCIFAELLNRRPFLQGS  215 (397)
Q Consensus       168 ----------~~~~~~t~~y~aPE~l~~~~~~~-~~~DiwSlG~il~ell~g~~pf~~~  215 (397)
                                .....+++.|++|+.-.--...+ .+.++++.|+-+|.++|+..|+-+.
T Consensus       152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence                      00112466688888753322223 5679999999999999999776543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.91  E-value=6.7e-25  Score=220.55  Aligned_cols=248  Identities=27%  Similarity=0.350  Sum_probs=180.9

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc--cchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV--NFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      +|...+.||++.|=+|.+|++.. | .|+||++-+....-..  ..+.++|++ ...+++||.+.+.-+-..+...|||-
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR  100 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR  100 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence            68889999999999999997653 3 4999999766532222  222334555 66678999999988888888899999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC---Cc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---RR  167 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---~~  167 (397)
                      +|+..+|.+.+-.+. .+..-+.+-|+.||+.||.-||..||+|||||.|||||+.-+-+.|+||..-+..--+.   ..
T Consensus       101 qyvkhnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad  179 (1431)
T KOG1240|consen  101 QYVKHNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD  179 (1431)
T ss_pred             HHHhhhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence            999999999987654 48888999999999999999999999999999999999999999999997654321111   11


Q ss_pred             cccccc----CceeeChhcccCcc----------CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCC
Q 015948          168 FTHQVF----ARWYRAPELLFGAK----------QYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTAT  232 (397)
Q Consensus       168 ~~~~~~----t~~y~aPE~l~~~~----------~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~  232 (397)
                      ++...-    -..|.|||.+....          ..+++-||||+||+++||++ |+|+|.-+       ++++--.   
T Consensus       180 f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-------QL~aYr~---  249 (1431)
T KOG1240|consen  180 FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-------QLLAYRS---  249 (1431)
T ss_pred             ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-------HHHhHhc---
Confidence            221111    23499999975411          14577899999999999986 79999622       1111000   


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      -.     ...+..         -++.+   -+..++.+|..|++.||++|.+|++.|+.
T Consensus       250 ~~-----~~~~e~---------~Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  250 GN-----ADDPEQ---------LLEKI---EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             cC-----ccCHHH---------HHHhC---cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            00     000000         00000   14578999999999999999999999974

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.4e-23  Score=190.73  Aligned_cols=194  Identities=25%  Similarity=0.307  Sum_probs=141.8

Q ss_pred             CCCCeeEEEeeeec---------------------------CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHH
Q 015948           69 KSPHIIELIDAFPH---------------------------KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL  121 (397)
Q Consensus        69 ~hp~iv~l~~~~~~---------------------------~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil  121 (397)
                      +|||||++..+|.+                           ...+|+||.-...+|..++..+.  .+......++.|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~--~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH--RSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC--CchHHHHHHHHHHH
Confidence            49999999887632                           23589999999999999998776  67888899999999


Q ss_pred             HHHHHhHhCCccccCCCCCcEEEccC--C--cEEEeeeccceeeCCCC------CcccccccCceeeChhcccCccC---
Q 015948          122 KGLAFCHKKWVLHRDMKPNNLLIGSH--G--QLKLADFGLARIFGSPD------RRFTHQVFARWYRAPELLFGAKQ---  188 (397)
Q Consensus       122 ~aL~~lH~~~ivHrDlkp~NILl~~~--~--~~kl~DFG~a~~~~~~~------~~~~~~~~t~~y~aPE~l~~~~~---  188 (397)
                      +|+.|||++||.|||||.+||||.-+  +  .+.|+|||.+-.-....      +.....-|.-.-||||+......   
T Consensus       352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a  431 (598)
T KOG4158|consen  352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA  431 (598)
T ss_pred             HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence            99999999999999999999999533  2  48999999874322111      11222334555899999743221   


Q ss_pred             --CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHH
Q 015948          189 --YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDD  266 (397)
Q Consensus       189 --~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  266 (397)
                        .-.++|.|+.|.+.||+++...||.+..+-                       +.+...|+..+.|   .+...+++.
T Consensus       432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem-----------------------~L~~r~Yqe~qLP---alp~~vpp~  485 (598)
T KOG4158|consen  432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-----------------------LLDTRTYQESQLP---ALPSRVPPV  485 (598)
T ss_pred             eeccchhhhhhhhhhHHHHhccCCcccccchh-----------------------eechhhhhhhhCC---CCcccCChH
Confidence              124789999999999999999888763211                       1111122222222   334566899


Q ss_pred             HHHHHHHhcCcCCCCCCCH---HHHhc
Q 015948          267 ALDLLSKMFTYDPKARITA---QQALE  290 (397)
Q Consensus       267 ~~~li~~~L~~dP~~R~t~---~e~l~  290 (397)
                      +++|+..+|+.||++|+++   +.+|+
T Consensus       486 ~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  486 ARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             HHHHHHHHhcCCccccCCccHHHhHHH
Confidence            9999999999999999985   44554

>PRK10345 hypothetical protein; Provisional

Probab=99.89  E-value=1.6e-22  Score=177.12  Aligned_cols=135  Identities=16%  Similarity=0.157  Sum_probs=105.9

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-----CCCCeeEEEeeeecCC---eEE
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-----KSPHIIELIDAFPHKG---NLH   87 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~l~~~~~~~~---~~~   87 (397)
                      -.+.||+|+||.||.  ++.++.. +||++......  ....+.+|+.+++.+     .||||++++++++++.   .++
T Consensus         6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~   80 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY   80 (210)
T ss_pred             CcceecCCCceEEEE--CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence            357899999999995  7777666 69988764321  234578999999999     5799999999998873   444


Q ss_pred             -EEEEccc---cCHHHHHHhcCCCCCHHHHHHHHHHHHHHH-HHhHhCCccccCCCCCcEEEccC----CcEEEeeeccc
Q 015948           88 -LVFEFME---TDLETVIRNTNIFLSPADIKSYMQMTLKGL-AFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLA  158 (397)
Q Consensus        88 -lv~e~~~---g~L~~~~~~~~~~l~~~~~~~~~~qil~aL-~~lH~~~ivHrDlkp~NILl~~~----~~~kl~DFG~a  158 (397)
                       +|+||++   |+|.+++.+.  .+++.  ..++.|++.++ +|||+++|+||||||+|||++..    ++++|+||+.+
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence             7899955   5888888653  36665  35678888787 99999999999999999999743    37999995544


Q ss_pred             e
Q 015948          159 R  159 (397)
Q Consensus       159 ~  159 (397)
                      .
T Consensus       157 ~  157 (210)
T PRK10345        157 S  157 (210)
T ss_pred             c
Confidence            3

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1.1e-22  Score=207.87  Aligned_cols=192  Identities=22%  Similarity=0.329  Sum_probs=158.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~   87 (397)
                      .+.|-|.+.||+|+||+||+|.+.+ |+.||||+-+.....+     +.-=.+++.+|+   -+.|..+..++...+.-+
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            6789999999999999999999887 9999999965544333     222344555555   356677777777777788


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-------CcEEEeeeccce
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-------GQLKLADFGLAR  159 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-------~~~kl~DFG~a~  159 (397)
                      +|+||.+ |+|++++. .+.-+++..+..+..|++..++.||.++|||+||||+|+||...       --++|+|||-+-
T Consensus       771 lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si  849 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI  849 (974)
T ss_pred             eeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence            9999999 89999988 45559999999999999999999999999999999999999532       349999999886


Q ss_pred             ee--CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC
Q 015948          160 IF--GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP  210 (397)
Q Consensus       160 ~~--~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~  210 (397)
                      .+  ......+...++|-.+-++|++.| +.+++.+|.|.|+.++|-||+|+.
T Consensus       850 Dm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  850 DMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             eeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHHHHHHHHH
Confidence            53  233456777888888999999988 779999999999999999999974

>smart00090 RIO RIO-like kinase

Probab=99.88  E-value=1.2e-22  Score=182.12  Aligned_cols=146  Identities=20%  Similarity=0.195  Sum_probs=113.0

Q ss_pred             ceeeeeeeeecCcEEEEEEE-ECCCCcEEEEEEeecCCccCC----------------------ccchHHHHHHHHHhcC
Q 015948           13 RYLKREVLGEGTYGVVYKAI-DTKTGQTVAIKKIRLGKQKEG----------------------VNFTALREIKLLKELK   69 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~-~~~~~~~~aiK~i~~~~~~~~----------------------~~~~~~~E~~~l~~l~   69 (397)
                      -|.+.+.||+|+||.||+|. +..+|+.||||+++.......                      ....+.+|+.+++++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999998 778999999999986432110                      0112457999999997


Q ss_pred             CC--CeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC-ccccCCCCCcEEEcc
Q 015948           70 SP--HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW-VLHRDMKPNNLLIGS  146 (397)
Q Consensus        70 hp--~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~-ivHrDlkp~NILl~~  146 (397)
                      +.  .+.++++.    ...|+||||++|+.+.........+....+..++.||+.+|.+||++| |+||||||+||+++ 
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-  183 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-  183 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence            53  34444442    234899999998543333223344677778899999999999999999 99999999999999 


Q ss_pred             CCcEEEeeeccceeeCC
Q 015948          147 HGQLKLADFGLARIFGS  163 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~  163 (397)
                      ++.++|+|||.|...+.
T Consensus       184 ~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      184 DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             CCCEEEEEChhhhccCC
Confidence            88999999999986544

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.8e-22  Score=175.10  Aligned_cols=241  Identities=16%  Similarity=0.196  Sum_probs=188.0

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      ..+..+|.+...|..|+|++.  |..++.|++............+..|.-.|+-++||||+.+++++....++.++..||
T Consensus       192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m  269 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM  269 (448)
T ss_pred             hhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence            345567788889999999765  456677888776666666667888999999999999999999999999999999999


Q ss_pred             c-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEe--eeccceeeCCCCCc
Q 015948           94 E-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLA--DFGLARIFGSPDRR  167 (397)
Q Consensus        94 ~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~--DFG~a~~~~~~~~~  167 (397)
                      + |+|+..+..... -.+-.++..++..++.|+.|||+.-  |.--.|....++|+++-+.+|.  |--++.  .     
T Consensus       270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf--q-----  342 (448)
T KOG0195|consen  270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--Q-----  342 (448)
T ss_pred             cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee--e-----
Confidence            9 899999987643 3677889999999999999999875  5555688999999998776653  322221  1     


Q ss_pred             ccccccCceeeChhcccCccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQ--YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~--~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      .......+.||+||.+.....  .-.++|+|||++++|||.|...||..-+.-+.-.+|.-.                  
T Consensus       343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale------------------  404 (448)
T KOG0195|consen  343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE------------------  404 (448)
T ss_pred             ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc------------------
Confidence            112334677999999965332  236789999999999999999999988776655554211                  


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL  289 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l  289 (397)
                              .---.++|++|..+..|+.-|+..||.+||....++
T Consensus       405 --------glrv~ippgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  405 --------GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             --------cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence                    001245678899999999999999999999887654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=1.1e-22  Score=203.74  Aligned_cols=263  Identities=25%  Similarity=0.383  Sum_probs=207.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~l   88 (397)
                      ...|.+.+.||+|+|+.|-++.... ....+|.|.+............+..|..+-+.++ |.|++.+++...+.+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            4578899999999999999887643 3346777766554433333344456888888887 9999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhH-hCCccccCCCCCcEEEccCC-cEEEeeeccceeeCC-
Q 015948           89 VFEFMET-DLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGS-  163 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH-~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~-  163 (397)
                      +++|..| ++...+...+. ..+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .++++|||+|..+.. 
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK  178 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence            9999885 66666623443 6888899999999999999999 99999999999999999999 999999999988755 


Q ss_pred             C--CCccccccc-CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          164 P--DRRFTHQVF-ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       164 ~--~~~~~~~~~-t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      .  .......+| ++.|+|||...+........|+||.|+++..|++|..|+......+...           ..|.   
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-----------~~~~---  244 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-----------SSWK---  244 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-----------eeec---
Confidence            2  234456677 8999999999886677889999999999999999998877654332110           0011   


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                               ..........+..++..+.+++.+++..+|..|.+.+++..++|+..
T Consensus       245 ---------~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  245 ---------SNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ---------ccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence                     01111112344567899999999999999999999999999999987

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.84  E-value=9.4e-22  Score=185.53  Aligned_cols=177  Identities=28%  Similarity=0.416  Sum_probs=132.8

Q ss_pred             CeEEEEEEccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           84 GNLHLVFEFME-TDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      .++||.|++|. ++|.++++.+  ....+......++.|+..|++|   +|.+|+|+||.||+...+..+||.|||+...
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence            46899999999 6888888643  2346677889999999999999   9999999999999999999999999999987


Q ss_pred             eCCCC------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948          161 FGSPD------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATP  233 (397)
Q Consensus       161 ~~~~~------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~  233 (397)
                      .....      ...+..+||.+||+||++.+ ..|+.++||||||+|||||+.- ...|.   ....+..+..       
T Consensus       406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~-------  474 (516)
T KOG1033|consen  406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFE---RIATLTDIRD-------  474 (516)
T ss_pred             cccCCcccchhhhhhhcccccccCCHHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHH---HHHhhhhhhc-------
Confidence            64433      35677899999999999987 7799999999999999999961 11111   1111111111       


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                      ..||                    ..+-.--+.-.+|+.+||...|.+||++.+.-.|.|.
T Consensus       475 g~ip--------------------~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  475 GIIP--------------------PEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             CCCC--------------------hHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            1111                    0000113456789999999999999977776666664

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.83  E-value=3.7e-20  Score=162.25  Aligned_cols=139  Identities=22%  Similarity=0.271  Sum_probs=107.5

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC--------------------ccchHHHHHHHHHhcCCC--
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--------------------VNFTALREIKLLKELKSP--   71 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~--------------------~~~~~~~E~~~l~~l~hp--   71 (397)
                      |.+.+.||+|+||.||+|.+. +|+.||||+++.......                    ......+|+.++..+.+.  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            888999999999999999874 799999999875431100                    011245789999999777  


Q ss_pred             CeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948           72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        72 ~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                      .+...++.    ...++||||++|..+..+..      ......++.+|+.++.++|+.||+||||||+||+++.++.++
T Consensus        96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~  165 (198)
T cd05144          96 PVPKPIDW----NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY  165 (198)
T ss_pred             CCCceeec----CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence            44555442    34589999999744333321      134567889999999999999999999999999999999999


Q ss_pred             EeeeccceeeCC
Q 015948          152 LADFGLARIFGS  163 (397)
Q Consensus       152 l~DFG~a~~~~~  163 (397)
                      |+|||++.....
T Consensus       166 liDfg~~~~~~~  177 (198)
T cd05144         166 IIDWPQMVSTDH  177 (198)
T ss_pred             EEECCccccCCC
Confidence            999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=8.5e-20  Score=161.56  Aligned_cols=135  Identities=19%  Similarity=0.267  Sum_probs=109.7

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      +.||+|++|.||+|.+  .|..+++|+.........      ....+.+|+.++..+.|++|.....++......++|||
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            6799999999999976  678899997653322111      11245689999999999998777667667778899999


Q ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      |++| +|.+.+....    . ....++.+++.+|.++|+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus        80 ~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         80 YIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9986 6766665422    2 7788999999999999999999999999999999 78899999999875

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.80  E-value=2.5e-19  Score=157.02  Aligned_cols=132  Identities=20%  Similarity=0.289  Sum_probs=101.8

Q ss_pred             eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      .||+|+||.||+|.  ..|..+++|+.........      ...++.+|++++..+.|+++....-++......++||||
T Consensus         1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            48999999999997  4678899998654322111      113456799999999987655444444456667899999


Q ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        93 ~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      ++| +|...+....     .   .++.+++.+|.+||+.|++|+|++|+||+++ ++.++++|||++...
T Consensus        79 ~~g~~l~~~~~~~~-----~---~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        79 IEGKPLKDVIEEGN-----D---ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             ECCccHHHHHhhcH-----H---HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            986 5665554321     1   7899999999999999999999999999999 889999999998763

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.80  E-value=3.3e-19  Score=154.68  Aligned_cols=139  Identities=24%  Similarity=0.310  Sum_probs=100.3

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccch----------------------HHHHHHHHHhcCCCC-
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT----------------------ALREIKLLKELKSPH-   72 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~----------------------~~~E~~~l~~l~hp~-   72 (397)
                      +.+.||+|+||+||+|.+. +|+.||||+++...........                      ...|...+..+.+.. 
T Consensus         1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~   79 (187)
T cd05119           1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV   79 (187)
T ss_pred             CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence            3578999999999999886 7899999998764322111111                      135666666665433 


Q ss_pred             -eeEEEeeeecCCeEEEEEEcccc-CHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCC
Q 015948           73 -IIELIDAFPHKGNLHLVFEFMET-DLE-TVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHG  148 (397)
Q Consensus        73 -iv~l~~~~~~~~~~~lv~e~~~g-~L~-~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~  148 (397)
                       +.+.++.    ...++||||++| .+. ..+....  . ...+..++.+++.++.++|. +||+|+||||+||+++ ++
T Consensus        80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~  151 (187)
T cd05119          80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG  151 (187)
T ss_pred             CCCceEec----CCCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence             4444443    235899999997 221 1111111  1 16778899999999999999 9999999999999999 89


Q ss_pred             cEEEeeeccceeeCC
Q 015948          149 QLKLADFGLARIFGS  163 (397)
Q Consensus       149 ~~kl~DFG~a~~~~~  163 (397)
                      .++|+|||.+.....
T Consensus       152 ~~~liDfg~a~~~~~  166 (187)
T cd05119         152 KVYIIDVPQAVEIDH  166 (187)
T ss_pred             cEEEEECcccccccC
Confidence            999999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.79  E-value=7.1e-19  Score=176.69  Aligned_cols=139  Identities=19%  Similarity=0.236  Sum_probs=108.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC------CccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE------GVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~------~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ...|...+.||+|+||+||++....  ..+++|+........      .....+.+|+.+++.++|++|+....++....
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE  409 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence            3455678999999999999997643  344555432211111      11234678999999999999988777776777


Q ss_pred             eEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           85 NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        85 ~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      ..++||||++| +|.+.+.         ....++.+++.+|.+||+.|++||||||+|||+ .++.++|+|||+++..
T Consensus       410 ~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        410 EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            78999999986 6666554         346789999999999999999999999999999 6788999999999763

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.79  E-value=4.3e-19  Score=170.54  Aligned_cols=205  Identities=24%  Similarity=0.311  Sum_probs=154.8

Q ss_pred             HHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCc-cccCCCCCcE
Q 015948           65 LKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV-LHRDMKPNNL  142 (397)
Q Consensus        65 l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i-vHrDlkp~NI  142 (397)
                      |+.+.|.|+.++++.+-++...++|.+||. |+|.+.+......++.--...+++.|+.||.|||+.-| .|+.++..|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            467899999999999999999999999999 89999998877778888888999999999999998865 9999999999


Q ss_pred             EEccCCcEEEeeeccceeeCCC--CCcccccccCceeeChhcccCccC------CCCcchHHHHHHHHHHHHhCCCCCCC
Q 015948          143 LIGSHGQLKLADFGLARIFGSP--DRRFTHQVFARWYRAPELLFGAKQ------YGAGVDVWAAGCIFAELLNRRPFLQG  214 (397)
Q Consensus       143 Ll~~~~~~kl~DFG~a~~~~~~--~~~~~~~~~t~~y~aPE~l~~~~~------~~~~~DiwSlG~il~ell~g~~pf~~  214 (397)
                      +++....+||+|||+.......  ........-...|.|||.+.+...      -+.+.|+||||+++||+++...||..
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            9999999999999998776321  111111112345999999976321      36679999999999999999999976


Q ss_pred             CCc----HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          215 SSD----IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       215 ~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ...    .+.+..+.. .+.....  |+.                 .... ...+++..++..|+..+|.+||+++++-.
T Consensus       161 ~~~~~~~~eii~~~~~-~~~~~~r--P~i-----------------~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  161 RNLVEDPDEIILRVKK-GGSNPFR--PSI-----------------ELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             ccccCChHHHHHHHHh-cCCCCcC--cch-----------------hhhh-hcchHHHHHHHHhcccChhhCccHHHHHh
Confidence            322    123333222 1111111  110                 0000 22457999999999999999999988754

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=4.3e-19  Score=170.65  Aligned_cols=261  Identities=21%  Similarity=0.240  Sum_probs=205.1

Q ss_pred             Chhhhcceeeeeeeee--cCcEEEEEEEE--CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeee
Q 015948            7 SKKVADRYLKREVLGE--GTYGVVYKAID--TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP   81 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~--G~~g~Vy~a~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~   81 (397)
                      .......+.+.+.+|.  |.+|.||.+..  ..++..+|+|.-+..........+-++|+...+.+ .|+|.++.+..|+
T Consensus       109 ~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e  188 (524)
T KOG0601|consen  109 DSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE  188 (524)
T ss_pred             cchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc
Confidence            3445778889999999  99999999988  78889999998554444333334445788777777 5899999999999


Q ss_pred             cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHH----HHHHhHhCCccccCCCCCcEEEccC-CcEEEeeec
Q 015948           82 HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK----GLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFG  156 (397)
Q Consensus        82 ~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~----aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG  156 (397)
                      ..+..|+-+|+|+.+|..+.......+++..++.++.+...    ||.++|+.+++|-|+||+||++..+ ..++++|||
T Consensus       189 ~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~  268 (524)
T KOG0601|consen  189 GSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG  268 (524)
T ss_pred             cCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence            99999999999999999999888878999999999999999    9999999999999999999999999 889999999


Q ss_pred             cceeeCCCCCccccc-----ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          157 LARIFGSPDRRFTHQ-----VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~-----~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      +...+++..-.....     .+..-|++||++.+  -++...|+++||-++.+-.++...+....               
T Consensus       269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~---------------  331 (524)
T KOG0601|consen  269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGK---------------  331 (524)
T ss_pred             eeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCC---------------
Confidence            998887655222211     44455999999865  57899999999999999988865543220               


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                       ...|-.+....           ....+....+.++...+..||+.+|..|++++.++.|++...
T Consensus       332 -~~~W~~~r~~~-----------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  332 -NSSWSQLRQGY-----------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             -CCCcccccccc-----------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence             01111111000           001223344677777999999999999999999999998764

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.76  E-value=8.6e-18  Score=150.99  Aligned_cols=136  Identities=24%  Similarity=0.314  Sum_probs=102.8

Q ss_pred             eeeee-ecCcEEEEEEEECCCCcEEEEEEeecCCc-----c------CCccchHHHHHHHHHhcCCCCe--eEEEeeeec
Q 015948           17 REVLG-EGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-----K------EGVNFTALREIKLLKELKSPHI--IELIDAFPH   82 (397)
Q Consensus        17 ~~~LG-~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-----~------~~~~~~~~~E~~~l~~l~hp~i--v~l~~~~~~   82 (397)
                      ...|| .||.|+||.+...  +..++||.+.....     .      ......+.+|+.++..|.|++|  ++.+++...
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            34677 8899999999654  78899998854221     1      1122356789999999998775  666665433


Q ss_pred             C-Ce---EEEEEEcccc--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948           83 K-GN---LHLVFEFMET--DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        83 ~-~~---~~lv~e~~~g--~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                      . +.   .++||||++|  +|...+...  .+++..    +.+|+.+|.+||++||+||||||+|||++.++.++|+|||
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg  187 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQEA--PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD  187 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence            2 22   3599999996  676666542  355543    5789999999999999999999999999999999999999


Q ss_pred             ccee
Q 015948          157 LARI  160 (397)
Q Consensus       157 ~a~~  160 (397)
                      .++.
T Consensus       188 ~~~~  191 (239)
T PRK01723        188 RGEL  191 (239)
T ss_pred             Cccc
Confidence            9875

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.73  E-value=2.3e-17  Score=137.22  Aligned_cols=132  Identities=19%  Similarity=0.220  Sum_probs=110.0

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC--CCeeEEEeeeecCCeEEEEEEcc
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      +.+.||.|.++.||++....  ..+++|.......    ...+.+|+.+++.+++  .++.+++.++..++..+++|||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence            46789999999999998743  7899998754432    3457789999999977  58999999988888999999999


Q ss_pred             ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC---CccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK---WVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        94 ~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      .|.....+       +......++.+++.+|.++|..   +++|+|++|+||+++..+.++++|||.++.
T Consensus        76 ~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          76 EGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             CCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            87533322       4566677899999999999985   799999999999999989999999999864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.71  E-value=4e-18  Score=172.06  Aligned_cols=267  Identities=25%  Similarity=0.379  Sum_probs=207.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      -.+.+.+.+-+-+|.++.++.+.-..+|..+++|+......-.. ....+..+-.++-.-.+|.++...-.|.-....++
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            35778888899999999999998888888888887655432222 23334445555555567888877766777888999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC---
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP---  164 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~---  164 (397)
                      |++|++ +++...+++.. ..+++.++.++..+..+++|||...+.|+|++|.|+|+..+|+.+++|||.....+..   
T Consensus       882 ~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~  960 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT  960 (1205)
T ss_pred             hhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence            999998 57888877655 4788889999999999999999999999999999999999999999999854322100   


Q ss_pred             ----------------------------CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 015948          165 ----------------------------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS  216 (397)
Q Consensus       165 ----------------------------~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  216 (397)
                                                  .......++|+.|.+||.+.+ ...+..+|+|++|++++|.++|.+||....
T Consensus       961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen  961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred             CCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence                                        011234567888999999988 557889999999999999999999999887


Q ss_pred             cHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHH---HHhcCCC
Q 015948          217 DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ---QALEHRY  293 (397)
Q Consensus       217 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~---e~l~hp~  293 (397)
                      .......|...     ...|++.                    ....+.++.+++.++|..+|.+|.++.   ++-.|+|
T Consensus      1040 pq~~f~ni~~~-----~~~~p~g--------------------~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~ 1094 (1205)
T KOG0606|consen 1040 PQQIFENILNR-----DIPWPEG--------------------PEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPF 1094 (1205)
T ss_pred             hhhhhhccccC-----CCCCCCC--------------------ccccChhhhhhhhhhhccCchhccCcccccccccCCc
Confidence            77665554332     1223322                    123478999999999999999999877   8899999


Q ss_pred             CCCCCCCCCC
Q 015948          294 FSSAPLPTEP  303 (397)
Q Consensus       294 ~~~~~~~~~~  303 (397)
                      |+...|....
T Consensus      1095 ~~~~~~~~l~ 1104 (1205)
T KOG0606|consen 1095 FQDVDWENLA 1104 (1205)
T ss_pred             cCCCCccccc
Confidence            9998876543

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.63  E-value=4.7e-15  Score=144.33  Aligned_cols=183  Identities=22%  Similarity=0.341  Sum_probs=135.5

Q ss_pred             eeeeeeeeecCcEEEE-EEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           14 YLKREVLGEGTYGVVY-KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy-~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      |.+ +..+-++.+ +| .|..+.++..+.|.+......  .....+.+-++-|+.++||||+++++.++.++.+|+|+|-
T Consensus        15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTEr   90 (690)
T KOG1243|consen   15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTER   90 (690)
T ss_pred             ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeec
Confidence            444 444444443 34 466677889999998875544  3334567888999999999999999999999999999998


Q ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH-hCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        93 ~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH-~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      +.. |...+.+    ++...+...++||+.||-||| +++++|++|.-..|+|+..|+.||++|.++.............
T Consensus        91 V~P-l~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~  165 (690)
T KOG1243|consen   91 VRP-LETVLKE----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSL  165 (690)
T ss_pred             ccc-HHHHHHH----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccc
Confidence            862 2233333    336777888999999999997 6789999999999999999999999999987653332111111


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR  208 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g  208 (397)
                      ..-..|..|+.+..   -+-..|.|.|||+++|++.|
T Consensus       166 ~~~~s~~~P~~~~~---s~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  166 YLIESFDDPEEIDP---SEWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             hhhhcccChhhcCc---cccchhhhhHHHHHHHHhCc
Confidence            11122777876533   22568999999999999999

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.61  E-value=9.5e-15  Score=125.78  Aligned_cols=142  Identities=18%  Similarity=0.179  Sum_probs=103.1

Q ss_pred             eeeeeecCcEEEEEEEECC------CCcEEEEEEeecCCc-----------cCCc---------cch----HHHHHHHHH
Q 015948           17 REVLGEGTYGVVYKAIDTK------TGQTVAIKKIRLGKQ-----------KEGV---------NFT----ALREIKLLK   66 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~------~~~~~aiK~i~~~~~-----------~~~~---------~~~----~~~E~~~l~   66 (397)
                      ...||.|.-+.||.|....      .+..+|||+.+....           ....         ...    +.+|+..|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            4679999999999997653      357999998864321           1000         111    237999999


Q ss_pred             hcCC--CCeeEEEeeeecCCeEEEEEEccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCcE
Q 015948           67 ELKS--PHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFC-HKKWVLHRDMKPNNL  142 (397)
Q Consensus        67 ~l~h--p~iv~l~~~~~~~~~~~lv~e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~l-H~~~ivHrDlkp~NI  142 (397)
                      ++..  -++.+++++    ..-+|||||++|+ +.....+ +..+++..+..+..+++.+|..| |+.|++|+||++.||
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI  156 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM  156 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence            9854  456666654    3457999999864 3221111 22366677788899999999999 899999999999999


Q ss_pred             EEccCCcEEEeeeccceeeCCC
Q 015948          143 LIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus       143 Ll~~~~~~kl~DFG~a~~~~~~  164 (397)
                      |+. ++.+.|+|||.+.....+
T Consensus       157 L~~-~~~v~iIDF~qav~~~hp  177 (197)
T cd05146         157 LWH-DGKVWFIDVSQSVEPTHP  177 (197)
T ss_pred             EEE-CCcEEEEECCCceeCCCC
Confidence            996 577999999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.60  E-value=8e-16  Score=151.69  Aligned_cols=146  Identities=18%  Similarity=0.271  Sum_probs=95.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---------------------C-----------Cccch
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---------------------E-----------GVNFT   57 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---------------------~-----------~~~~~   57 (397)
                      +...|.. +.||+|++|.||+|+.+.+|+.||||+++.....                     .           +....
T Consensus       118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~  196 (537)
T PRK04750        118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT  196 (537)
T ss_pred             HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence            4556776 8999999999999999888999999999754210                     0           00111


Q ss_pred             HH------HHHHHHHhcC----CCCeeEEEeee-ecCCeEEEEEEcccc-CHHHH--HHhcCC---CCCHHHHHHHHHHH
Q 015948           58 AL------REIKLLKELK----SPHIIELIDAF-PHKGNLHLVFEFMET-DLETV--IRNTNI---FLSPADIKSYMQMT  120 (397)
Q Consensus        58 ~~------~E~~~l~~l~----hp~iv~l~~~~-~~~~~~~lv~e~~~g-~L~~~--~~~~~~---~l~~~~~~~~~~qi  120 (397)
                      +.      +|+.-+.++.    +...+.+-..| +.....++||||+.| .+.+.  +...+.   .+.+..+..++.|+
T Consensus       197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence            22      3333333331    22222222222 123456799999997 55442  232221   24455555666665


Q ss_pred             HHHHHHhHhCCccccCCCCCcEEEccCC----cEEEeeeccceeeCC
Q 015948          121 LKGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLARIFGS  163 (397)
Q Consensus       121 l~aL~~lH~~~ivHrDlkp~NILl~~~~----~~kl~DFG~a~~~~~  163 (397)
                      +       ..|++|+|+||.||+++.+|    +++++|||++..++.
T Consensus       277 f-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 F-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             H-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            4       58999999999999999988    999999999987744

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.57  E-value=1.7e-14  Score=140.63  Aligned_cols=142  Identities=20%  Similarity=0.266  Sum_probs=93.6

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-----------------------c---------------cchH
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-----------------------V---------------NFTA   58 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-----------------------~---------------~~~~   58 (397)
                      .+.||+|++|.||+|+.+ +|+.||||+.+......-                       .               ...+
T Consensus       122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            367999999999999864 789999999865421000                       0               0123


Q ss_pred             HHHHHHHHhcC----C-CCeeEEEeeeecCCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHH-HHHHhHhCC
Q 015948           59 LREIKLLKELK----S-PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKW  131 (397)
Q Consensus        59 ~~E~~~l~~l~----h-p~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~-aL~~lH~~~  131 (397)
                      .+|...+.++.    + ++|.-..-++...+..++||||++| ++.+..........   ...++..++. .+..+|..|
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCC
Confidence            34555555542    2 3332111122234457899999997 45444332211122   2345555555 478899999


Q ss_pred             ccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948          132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus       132 ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      ++|+|+||.||+++.+|+++|+|||++..++
T Consensus       278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            9999999999999999999999999998764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.56  E-value=2.6e-15  Score=144.71  Aligned_cols=253  Identities=19%  Similarity=0.170  Sum_probs=184.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEEC-CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDT-KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   87 (397)
                      ...+|-.+..||.|.|+.|+.+... .++..|++|.+.............+.|+.+...+ .|.+++..+..|....+.|
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~  342 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY  342 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence            3567888999999999999998644 5678999998877665554444556788887777 5899999999998888889


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~~~~~~  166 (397)
                      +=.|||.|....+-....-.+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||..+.+.-  .
T Consensus       343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~--~  420 (524)
T KOG0601|consen  343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF--S  420 (524)
T ss_pred             CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce--e
Confidence            999999853333222222338889999999999999999999999999999999999886 7889999998865311  1


Q ss_pred             cccccccCceee-ChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          167 RFTHQVFARWYR-APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       167 ~~~~~~~t~~y~-aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      . ......-++. ..|++.....+..++|++|||.-+.+.+++.++-......   ..|+..                  
T Consensus       421 ~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~i~~~------------------  478 (524)
T KOG0601|consen  421 S-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LTIRSG------------------  478 (524)
T ss_pred             c-ccccccccccccchhhccccccccccccccccccccccccCcccCcccccc---eeeecc------------------
Confidence            1 1112222244 3566655577889999999999999999998653221111   011000                  


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                .....+..+..+..+...++..++..|+.+.++..|.-|..
T Consensus       479 ----------~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  479 ----------DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             ----------cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence                      00111233467788889999999999999999988876643

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.53  E-value=4.6e-14  Score=120.20  Aligned_cols=128  Identities=20%  Similarity=0.158  Sum_probs=94.4

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee-EEEeeeecCCeEEEEEEcccc
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      .+.|+.|.++.||++...  +..|++|.......   ......+|+.+++.+.+.+++ +++....  ...++||||++|
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G   75 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG   75 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence            467899999999999754  78899998754321   122456899999998765544 4554443  234799999998


Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCc-----cccCCCCCcEEEccCCcEEEeeecccee
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV-----LHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i-----vHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      ......        ......++.+++.+|+.||+.++     +|+|++|.||+++ ++.++++|||.+..
T Consensus        76 ~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          76 SELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             Cccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            433211        01123457899999999999985     9999999999998 67899999999863

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.45  E-value=1.1e-14  Score=130.10  Aligned_cols=203  Identities=15%  Similarity=0.196  Sum_probs=137.8

Q ss_pred             HHHHHhcCCCCeeEEEeeeecCC-----eEEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCC-
Q 015948           62 IKLLKELKSPHIIELIDAFPHKG-----NLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKW-  131 (397)
Q Consensus        62 ~~~l~~l~hp~iv~l~~~~~~~~-----~~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~-  131 (397)
                      ..-|-++-|.|||+++.+|.+..     ...++.||+. |.+.+++++.   ...+....-+.|+.||+.||.|||+.. 
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            34566677999999999985543     5788999998 7887777653   344778888999999999999999885 


Q ss_pred             -ccccCCCCCcEEEccCCcEEEeeeccceeeCC----CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH
Q 015948          132 -VLHRDMKPNNLLIGSHGQLKLADFGLARIFGS----PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL  206 (397)
Q Consensus       132 -ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~----~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell  206 (397)
                       |+|+++..+-|++..+|-+|+.--........    .........+-++|.+||.=.. .+.+.++|||+||....+|.
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlema  276 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMA  276 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHHHHH
Confidence             99999999999999888777753221111000    0011112233466889986432 34667899999999999998


Q ss_pred             hCCCC-CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH
Q 015948          207 NRRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA  285 (397)
Q Consensus       207 ~g~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~  285 (397)
                      .+..- -.+.+....-..+...                               ++..-.+--+++|.+||.-.|..||++
T Consensus       277 ilEiq~tnseS~~~~ee~ia~~-------------------------------i~~len~lqr~~i~kcl~~eP~~rp~a  325 (458)
T KOG1266|consen  277 ILEIQSTNSESKVEVEENIANV-------------------------------IIGLENGLQRGSITKCLEGEPNGRPDA  325 (458)
T ss_pred             HheeccCCCcceeehhhhhhhh-------------------------------eeeccCccccCcCcccccCCCCCCcch
Confidence            76531 2222211111111110                               000001233578999999999999999


Q ss_pred             HHHhcCCCCCC
Q 015948          286 QQALEHRYFSS  296 (397)
Q Consensus       286 ~e~l~hp~~~~  296 (397)
                      .+++.||..-.
T Consensus       326 r~llfHpllfe  336 (458)
T KOG1266|consen  326 RLLLFHPLLFE  336 (458)
T ss_pred             hhhhcCceeee
Confidence            99999998643

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.43  E-value=7.6e-12  Score=118.68  Aligned_cols=213  Identities=14%  Similarity=0.186  Sum_probs=157.1

Q ss_pred             CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec----CCeEEEEEEcccc--CH
Q 015948           24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH----KGNLHLVFEFMET--DL   97 (397)
Q Consensus        24 ~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~~~~lv~e~~~g--~L   97 (397)
                      .-.+.|+|....+|..|++|.++..+.....  ....-+++++++.|.|||++.++|..    +..+++|++|.++  +|
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n--k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL  365 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTN--KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL  365 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcc--cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence            3468899999999999999999543322211  23357899999999999999998863    4468999999984  67


Q ss_pred             HHHHHh--------------cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           98 ETVIRN--------------TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        98 ~~~~~~--------------~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      +++.-.              .+...+|..+|.|+.||..||.++|+.|+..+-|.|.+||++.+.+++|...|+.-.+..
T Consensus       366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            766532              233478899999999999999999999999999999999999888999998888776543


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCC-CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ..            .  |-+.+    -.+-|.=.||.+++.|.+|..= +........                      
T Consensus       446 d~------------~--~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s----------------------  485 (655)
T KOG3741|consen  446 DP------------T--EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSS----------------------  485 (655)
T ss_pred             CC------------C--cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHH----------------------
Confidence            32            0  11111    2356999999999999999631 000111100                      


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                  .++.+.+..|.+++++|..+...++++ -+..+++.+
T Consensus       486 ------------~~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  486 ------------HLTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             ------------HHHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence                        012333455899999999999999886 667776654

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.38  E-value=8.7e-12  Score=103.53  Aligned_cols=143  Identities=20%  Similarity=0.249  Sum_probs=104.8

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCc-----cchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGV-----NFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~-----~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ....|-+|+-+.|+++  ...|+.+.||.-.... ..+..     ..+..+|+.+|.++.--.|.-..-+|-+...-+|+
T Consensus        11 ~l~likQGAEArv~~~--~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRG--SFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeeccceeeEeee--ccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            6788899999999999  4568888888643222 11211     23445799999998644443333344455556789


Q ss_pred             EEcccc--CHHHHHHhcCCCCCHHH-HHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc---EEEeeecccee
Q 015948           90 FEFMET--DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARI  160 (397)
Q Consensus        90 ~e~~~g--~L~~~~~~~~~~l~~~~-~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~---~kl~DFG~a~~  160 (397)
                      |||++|  .+.+++......-.++. ...+++.|-+.+.-||.++|+|+||..+||++..+|.   +.++|||++..
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            999998  78888877543333333 3788999999999999999999999999999987653   58999999865

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.33  E-value=1.2e-11  Score=109.97  Aligned_cols=140  Identities=19%  Similarity=0.268  Sum_probs=102.1

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCC--CeeEEEeeeecC---CeEEEEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP--HIIELIDAFPHK---GNLHLVFE   91 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp--~iv~l~~~~~~~---~~~~lv~e   91 (397)
                      .+.||.|..+.||++... +|+.|++|........ .....+.+|+.+++.+.+.  .+.+++.+....   +..++|||
T Consensus         3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             ceecCCCccceEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence            367899999999999764 3688999987654322 2344677899999999763  456677766553   36789999


Q ss_pred             ccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-----------------------------------------
Q 015948           92 FMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-----------------------------------------  129 (397)
Q Consensus        92 ~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-----------------------------------------  129 (397)
                      |++|. +...+..  ..+++.....++.+++.+|..||+                                         
T Consensus        81 ~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (223)
T cd05154          81 RVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME  158 (223)
T ss_pred             EeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence            99974 3332221  236666667777777777777773                                         


Q ss_pred             ---------------CCccccCCCCCcEEEcc--CCcEEEeeecccee
Q 015948          130 ---------------KWVLHRDMKPNNLLIGS--HGQLKLADFGLARI  160 (397)
Q Consensus       130 ---------------~~ivHrDlkp~NILl~~--~~~~kl~DFG~a~~  160 (397)
                                     ..++|+|++|.|||++.  ++.+.|+||+.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                           34699999999999998  66789999998864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.33  E-value=1.7e-11  Score=102.30  Aligned_cols=132  Identities=17%  Similarity=0.281  Sum_probs=91.2

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCcc-----chHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVN-----FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~-----~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ..+++|+-+.+|.+..  -|..+++|.-.... ..+...     .+..+|+.++..+.--.|...+=++.+.....|+||
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            4578999999999944  45556666432211 222222     234579999999865444333333334556679999


Q ss_pred             ccccCHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           92 FMETDLET-VIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        92 ~~~g~L~~-~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      |++|.++. .+...    .    ..+++.+-.-+.-||..||+|+||.++||++..++ +.++|||++..
T Consensus        80 ~I~G~~lkd~l~~~----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          80 YIEGELLKDALEEA----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EeCChhHHHHHHhc----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            99997666 44443    1    44566666777899999999999999999997655 99999999974

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.24  E-value=4.2e-11  Score=102.81  Aligned_cols=129  Identities=26%  Similarity=0.353  Sum_probs=83.8

Q ss_pred             EEEEEEECCCCcEEEEEEeecCCcc-----------CC-------------ccchHHHHHHHHHhcCCC--CeeEEEeee
Q 015948           27 VVYKAIDTKTGQTVAIKKIRLGKQK-----------EG-------------VNFTALREIKLLKELKSP--HIIELIDAF   80 (397)
Q Consensus        27 ~Vy~a~~~~~~~~~aiK~i~~~~~~-----------~~-------------~~~~~~~E~~~l~~l~hp--~iv~l~~~~   80 (397)
                      .||.|... .|..+|||..+.....           ..             ......+|...|.++..-  ++.+++++.
T Consensus         1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            48999864 6779999988653210           00             012345799999999765  456666553


Q ss_pred             ecCCeEEEEEEccc--cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-hHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948           81 PHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF-CHKKWVLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        81 ~~~~~~~lv~e~~~--g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~-lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                      .    -+|||||++  |..+..+....  ++......++.+++..+.. +|+.||+|+||.+.|||++.+ .+.|+|||.
T Consensus        80 ~----~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~q  152 (188)
T PF01163_consen   80 R----NVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQ  152 (188)
T ss_dssp             T----TEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred             C----CEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCc
Confidence            2    359999999  74444444432  2245567778888885555 589999999999999999877 799999999


Q ss_pred             ceeeCC
Q 015948          158 ARIFGS  163 (397)
Q Consensus       158 a~~~~~  163 (397)
                      +.....
T Consensus       153 av~~~~  158 (188)
T PF01163_consen  153 AVDSSH  158 (188)
T ss_dssp             EEETTS
T ss_pred             ceecCC
Confidence            886543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.22  E-value=7.1e-12  Score=122.88  Aligned_cols=157  Identities=20%  Similarity=0.318  Sum_probs=116.9

Q ss_pred             HHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC----cc-----cccccCceeeChhcccCccCC
Q 015948          120 TLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR----RF-----THQVFARWYRAPELLFGAKQY  189 (397)
Q Consensus       120 il~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~----~~-----~~~~~t~~y~aPE~l~~~~~~  189 (397)
                      ...||.|+|.. ++||++|.|++|.++..|..||+.|+++.....+..    .+     ........|.|||.+.+ ...
T Consensus       108 v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~~  186 (700)
T KOG2137|consen  108 VADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TTN  186 (700)
T ss_pred             ccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-ccc
Confidence            34899999966 899999999999999999999999999876543221    00     01112345999999987 667


Q ss_pred             CCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHH
Q 015948          190 GAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDAL  268 (397)
Q Consensus       190 ~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  268 (397)
                      +.++|++||||++|.+. +|+..+.+.........-...++.                        .....-..++.+++
T Consensus       187 ~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~------------------------~~~~~s~~~p~el~  242 (700)
T KOG2137|consen  187 TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA------------------------GAFGYSNNLPSELR  242 (700)
T ss_pred             cccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc------------------------ccccccccCcHHHH
Confidence            89999999999999998 678877766544333222111110                        01112245689999


Q ss_pred             HHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          269 DLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       269 ~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                      +-+.++|..++..||++.+++..+||++....+
T Consensus       243 ~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~a  275 (700)
T KOG2137|consen  243 ESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLKA  275 (700)
T ss_pred             HHHHHHhcCCcccCcchhhhhcccccCCchhhh
Confidence            999999999999999999999999999876544

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.17  E-value=4.2e-10  Score=102.37  Aligned_cols=133  Identities=16%  Similarity=0.061  Sum_probs=92.9

Q ss_pred             EEEEEEEECCCCcEEEEEEeecCCccC---------CccchHHHHHHHHHhcCCCCe--eEEEeeeec-----CCeEEEE
Q 015948           26 GVVYKAIDTKTGQTVAIKKIRLGKQKE---------GVNFTALREIKLLKELKSPHI--IELIDAFPH-----KGNLHLV   89 (397)
Q Consensus        26 g~Vy~a~~~~~~~~~aiK~i~~~~~~~---------~~~~~~~~E~~~l~~l~hp~i--v~l~~~~~~-----~~~~~lv   89 (397)
                      ..|+++.  -.|+.|.||.........         .-...+.+|...+..|..-+|  .+++.+++.     ...-++|
T Consensus        36 rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV  113 (268)
T PRK15123         36 RRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII  113 (268)
T ss_pred             ceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence            3455553  356789999663322110         011136789998888843333  333444432     2357899


Q ss_pred             EEcccc--CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-------CCcEEEeeeccce
Q 015948           90 FEFMET--DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-------HGQLKLADFGLAR  159 (397)
Q Consensus        90 ~e~~~g--~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-------~~~~kl~DFG~a~  159 (397)
                      +|+++|  +|.+++... ....+......++.+++..+.-||+.||+|+|+++.|||++.       ++.+.|+||+.+.
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            999997  577776532 233566778899999999999999999999999999999975       4679999999886


Q ss_pred             e
Q 015948          160 I  160 (397)
Q Consensus       160 ~  160 (397)
                      .
T Consensus       194 ~  194 (268)
T PRK15123        194 I  194 (268)
T ss_pred             c
Confidence            4

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.11  E-value=3.1e-10  Score=100.31  Aligned_cols=140  Identities=24%  Similarity=0.323  Sum_probs=104.4

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc--------------CC------ccchHHHHHHHHHhcCCC--
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK--------------EG------VNFTALREIKLLKELKSP--   71 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~--------------~~------~~~~~~~E~~~l~~l~hp--   71 (397)
                      +.+...||-|.-|.||.|.+. .|..+|||.=+.....              ..      ....+.+|.++|..|...  
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            456789999999999999876 7899999965443210              00      112356899999999655  


Q ss_pred             CeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948           72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        72 ~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                      .|.+.+++    +...+||||++|-.+..+.     ++...+..++..|++-+..+-..||||+|+.+-|||++++|.+.
T Consensus       172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~  242 (304)
T COG0478         172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV  242 (304)
T ss_pred             CCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence            66666654    3456999999995444332     23556667777888777777799999999999999999999999


Q ss_pred             EeeeccceeeCC
Q 015948          152 LADFGLARIFGS  163 (397)
Q Consensus       152 l~DFG~a~~~~~  163 (397)
                      ++||--+...+.
T Consensus       243 vIDwPQ~v~~~h  254 (304)
T COG0478         243 VIDWPQAVPISH  254 (304)
T ss_pred             EEeCcccccCCC
Confidence            999976665444

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.07  E-value=2.5e-09  Score=93.99  Aligned_cols=105  Identities=21%  Similarity=0.285  Sum_probs=81.8

Q ss_pred             chHHHHHHHHHhcCCCC--eeEEEeeeecC----CeEEEEEEcccc--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q 015948           56 FTALREIKLLKELKSPH--IIELIDAFPHK----GNLHLVFEFMET--DLETVIRNTNIFLSPADIKSYMQMTLKGLAFC  127 (397)
Q Consensus        56 ~~~~~E~~~l~~l~hp~--iv~l~~~~~~~----~~~~lv~e~~~g--~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~l  127 (397)
                      .++.+|...+..|..-.  +.+.+.+.+..    ...++|+|+++|  +|.+.+..... .+......++.+++..+.-|
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence            35778988888885332  34444444332    245899999997  67777765333 66778889999999999999


Q ss_pred             HhCCccccCCCCCcEEEccCC---cEEEeeeccceee
Q 015948          128 HKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIF  161 (397)
Q Consensus       128 H~~~ivHrDlkp~NILl~~~~---~~kl~DFG~a~~~  161 (397)
                      |++||+|+|+++.|||++.++   .+.|+||+-++..
T Consensus       135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            999999999999999999887   8999999988753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.91  E-value=2.6e-08  Score=86.20  Aligned_cols=137  Identities=14%  Similarity=0.072  Sum_probs=100.2

Q ss_pred             eecCcEEEEEEEECCCCcEEEEEEeecCC----ccCCccchHHHHHHHHHhcCCCC--eeEEEeeee---c--CCeEEEE
Q 015948           21 GEGTYGVVYKAIDTKTGQTVAIKKIRLGK----QKEGVNFTALREIKLLKELKSPH--IIELIDAFP---H--KGNLHLV   89 (397)
Q Consensus        21 G~G~~g~Vy~a~~~~~~~~~aiK~i~~~~----~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~~---~--~~~~~lv   89 (397)
                      |+||.+.|+....  .|+.|=+|.-....    ....-...+.+|+..|..|..-+  +.+++ ++.   .  .-.-+||
T Consensus        27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            5689999999753  34467778654221    11234457889999999985422  44444 332   1  1246899


Q ss_pred             EEcccc--CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc--EEEeeecccee
Q 015948           90 FEFMET--DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARI  160 (397)
Q Consensus        90 ~e~~~g--~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~--~kl~DFG~a~~  160 (397)
                      +|-++|  +|.+++.+.. .+.++.....++.+++.+++-||+.|+.|+|+-+.|||++.+|.  ++++||.-++.
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            999985  7887775532 23567777899999999999999999999999999999987777  99999988765

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.87  E-value=1.1e-08  Score=88.75  Aligned_cols=142  Identities=18%  Similarity=0.244  Sum_probs=91.2

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCcc-c------hHHHHHHHHHhcCC---CCeeEE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-F------TALREIKLLKELKS---PHIIEL   76 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~-~------~~~~E~~~l~~l~h---p~iv~l   76 (397)
                      .+.+.++|.+.+++-......|.+.  ...|+.|++|..+......... .      ...+++..+.++..   ..++.+
T Consensus        26 ~~i~~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~  103 (229)
T PF06176_consen   26 EKILDNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADP  103 (229)
T ss_pred             HHHHhCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccc
Confidence            3456788999999988887777766  4567899999876433211110 0      11234444444432   233332


Q ss_pred             Eee-----eecCCeEEEEEEccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948           77 IDA-----FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        77 ~~~-----~~~~~~~~lv~e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      +.+     +......++||||++|- |.+...     +++    .+...|.+++.-||+.|++|+|..|.|++++.++ +
T Consensus       104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i  173 (229)
T PF06176_consen  104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-I  173 (229)
T ss_pred             eeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-E
Confidence            222     22234566899999984 433221     333    2445677789999999999999999999998655 9


Q ss_pred             EEeeecccee
Q 015948          151 KLADFGLARI  160 (397)
Q Consensus       151 kl~DFG~a~~  160 (397)
                      +++||+..+.
T Consensus       174 ~iID~~~k~~  183 (229)
T PF06176_consen  174 RIIDTQGKRM  183 (229)
T ss_pred             EEEECccccc
Confidence            9999987653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.86  E-value=4e-08  Score=91.69  Aligned_cols=251  Identities=16%  Similarity=0.132  Sum_probs=152.2

Q ss_pred             eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEee------eecCC-eE
Q 015948           15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDA------FPHKG-NL   86 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~------~~~~~-~~   86 (397)
                      ...+.||+|+-+.+|-.-  .-+. .+.|+.......-    .. +-+..|... .||-+-.-+.+      ..+.+ ..
T Consensus        14 ~~gr~LgqGgea~ly~l~--e~~d-~VAKIYh~Pppa~----~a-qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i   85 (637)
T COG4248          14 PPGRPLGQGGEADLYTLG--EVRD-QVAKIYHAPPPAA----QA-QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI   85 (637)
T ss_pred             CCCccccCCccceeeecc--hhhc-hhheeecCCCchH----HH-HHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence            346789999999999762  2222 3347665432211    11 122233332 45543321111      12222 36


Q ss_pred             EEEEEcccc--CHHHHHH-----hcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           87 HLVFEFMET--DLETVIR-----NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        87 ~lv~e~~~g--~L~~~~~-----~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      -++|..+.|  ....++.     +.......+-+...++.|+.+.+.||..|.+-+|+.++|+|+++++.+.|+|=..-.
T Consensus        86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq  165 (637)
T COG4248          86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ  165 (637)
T ss_pred             EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence            788888886  3333321     112236777888999999999999999999999999999999999999999865443


Q ss_pred             eeCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcH----HHHH-HHHHHhC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDI----DQLG-KIFAAFG  229 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~----~~~~-~i~~~~~  229 (397)
                      .. .........+|...|.+||...-    .-.-+...|.|.||+++|+|+.| +.||.|-...    .-++ .|..+.-
T Consensus       166 i~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f  244 (637)
T COG4248         166 IN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF  244 (637)
T ss_pred             ec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee
Confidence            32 34556667788999999998641    12246778999999999999875 8998764210    0000 1111000


Q ss_pred             CCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcC--CCCCCCHH
Q 015948          230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYD--PKARITAQ  286 (397)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d--P~~R~t~~  286 (397)
                      .          +-++  ...-...++...-+..+++++..|..+|+..-  +.-|||++
T Consensus       245 ~----------ya~~--~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~  291 (637)
T COG4248         245 A----------YASD--QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK  291 (637)
T ss_pred             e----------echh--ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence            0          0000  00001112222223456789999999998753  56899874

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.84  E-value=2.7e-08  Score=87.35  Aligned_cols=149  Identities=22%  Similarity=0.201  Sum_probs=100.5

Q ss_pred             hhcceeeee---eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc----------------------cchHHHHHHH
Q 015948           10 VADRYLKRE---VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV----------------------NFTALREIKL   64 (397)
Q Consensus        10 ~~~~y~i~~---~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~----------------------~~~~~~E~~~   64 (397)
                      +..+..+..   .|.+|.-+.||+|.. ..+..+|+|+.+........                      .....+|..-
T Consensus        43 L~~rg~i~~~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~N  121 (268)
T COG1718          43 LLSRGVITELVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRN  121 (268)
T ss_pred             HhcCCceeeeEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHH
Confidence            445555544   455778889999964 56789999998754321110                      0112357777


Q ss_pred             HHhcC--CCCeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCc
Q 015948           65 LKELK--SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNN  141 (397)
Q Consensus        65 l~~l~--hp~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~N  141 (397)
                      |+++.  +-.+.+.+.++.    -.|||||++.+..-.-+-....+...++..+..++++.+.-|-. .|+||+||..-|
T Consensus       122 L~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyN  197 (268)
T COG1718         122 LKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYN  197 (268)
T ss_pred             HHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhh
Confidence            77764  334455555543    35999999854111111112234555788889999999998876 899999999999


Q ss_pred             EEEccCCcEEEeeeccceeeCCC
Q 015948          142 LLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus       142 ILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      ||+. ++.+.|+|||-|....++
T Consensus       198 iL~~-~~~p~iID~~QaV~~~hp  219 (268)
T COG1718         198 ILVH-DGEPYIIDVSQAVTIDHP  219 (268)
T ss_pred             eEEE-CCeEEEEECccccccCCC
Confidence            9998 888999999999876543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.74  E-value=1.4e-07  Score=84.04  Aligned_cols=134  Identities=20%  Similarity=0.206  Sum_probs=83.2

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEeeeecCCeEEEEEEcccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      ..||.|..+.||+.    .|..+++|......    ......+|.++++.+..-.  +.+.+++.+..+...+|||+++|
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            57899999999984    25567888875322    2234678999999986433  46677777777788899999998


Q ss_pred             C-HHH-H---------------------HHhcCC-CCCHHH-HHHHHHHH----------HH-HHHHhH----hCCcccc
Q 015948           96 D-LET-V---------------------IRNTNI-FLSPAD-IKSYMQMT----------LK-GLAFCH----KKWVLHR  135 (397)
Q Consensus        96 ~-L~~-~---------------------~~~~~~-~l~~~~-~~~~~~qi----------l~-aL~~lH----~~~ivHr  135 (397)
                      . ... .                     ++.-.. ...... ...+..++          .. ...+|.    ...++|+
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg  158 (226)
T TIGR02172        79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG  158 (226)
T ss_pred             ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence            4 111 0                     111000 011111 00110000          11 111221    1247899


Q ss_pred             CCCCCcEEEccCCcEEEeeecccee
Q 015948          136 DMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       136 Dlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      |+.|.||+++.++ +.|+||+.+..
T Consensus       159 D~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       159 DFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCCCCcEEEcCCC-cEEEechhcCc
Confidence            9999999999888 99999998863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.70  E-value=1e-07  Score=93.95  Aligned_cols=141  Identities=19%  Similarity=0.348  Sum_probs=89.9

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC--------------------C---c---------------cchHH
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE--------------------G---V---------------NFTAL   59 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~--------------------~---~---------------~~~~~   59 (397)
                      +.|+.++-|.||+|+-+ +|+.||||+.+..-...                    .   .               ...+.
T Consensus       131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            67899999999999875 59999999986542110                    0   0               01112


Q ss_pred             HHHHHHHhcC-----CCCeeEEEeeeecCCeEEEEEEcccc-CHHHH--HHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC
Q 015948           60 REIKLLKELK-----SPHIIELIDAFPHKGNLHLVFEFMET-DLETV--IRNTNIFLSPADIKSYMQMTLKGLAFCHKKW  131 (397)
Q Consensus        60 ~E~~~l~~l~-----hp~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~--~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~  131 (397)
                      +|..-+.++.     .++|.-.-=+++..+.-.++|||+.| .+.+.  +...+  ++...+...+.++  -+.-+=..|
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g--~d~k~ia~~~~~~--f~~q~~~dg  285 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG--IDRKELAELLVRA--FLRQLLRDG  285 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC--CCHHHHHHHHHHH--HHHHHHhcC
Confidence            3444444442     24433222234445566899999998 34433  34332  5544433333332  223333489


Q ss_pred             ccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948          132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus       132 ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ++|.|.+|.||+++.+|++.+.|||+...++.
T Consensus       286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            99999999999999999999999999887644

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.70  E-value=1.7e-09  Score=105.49  Aligned_cols=247  Identities=16%  Similarity=0.144  Sum_probs=167.5

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCCeEEEEEE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~~~lv~e   91 (397)
                      -|...+-+++|+++++++.+...+.... .+.+...       ....-++++|.+++||| .+..++-++.+.+..++++
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~  314 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMR  314 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhh
Confidence            3555667889999999999877664444 6655422       23445899999999999 7777777888889999999


Q ss_pred             ccccC--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           92 FMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        92 ~~~g~--L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ++.++  ....+......+..-+...+++.-+.+|+++|+.--+|+|    ||+..+ +..+..||+.+..+.... ...
T Consensus       315 i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~  388 (829)
T KOG0576|consen  315 ICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPR  388 (829)
T ss_pred             hhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc-ccc
Confidence            99854  2222222222244455566777778999999998778998    887755 669999999988765443 456


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ...+++.++|||+... ..+....|.|++|+--.+|.-|-+|-...-  ...    ...+.     -++...+.+.    
T Consensus       389 t~~~~~~~~~pev~~~-~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~----~~~g~-----~p~s~~L~~~----  452 (829)
T KOG0576|consen  389 TAIGTPEPLAPEVIQE-NTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVL----PMIGN-----GPNSPMLTDK----  452 (829)
T ss_pred             cCCCCCCCCCchhhcc-cccccCCCccCCCcchhhcCCCCCCCCCCc--ccc----CCCCC-----CCCccccchh----
Confidence            6778999999998866 568889999999988778887777643310  000    00000     0000000000    


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                              ..+.  ..+-.++...|+..-|..|+...+++-|.+|..-++
T Consensus       453 --------~aw~--~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngCpl  492 (829)
T KOG0576|consen  453 --------SAWS--PVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGCPL  492 (829)
T ss_pred             --------hhcC--cccccCCcccccCCCCCCCcchhhHHHHHHhccCcc
Confidence                    0000  011115777899999999999999998888876543

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.49  E-value=1.4e-06  Score=85.89  Aligned_cols=152  Identities=21%  Similarity=0.302  Sum_probs=94.7

Q ss_pred             cChhhhcceee--eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-----------------------------
Q 015948            6 LSKKVADRYLK--REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-----------------------------   54 (397)
Q Consensus         6 ~~~~~~~~y~i--~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-----------------------------   54 (397)
                      ++..+.+-|..  .+.||.-+.|.|++|+-+. |+.||||+-+..-...-.                             
T Consensus       153 lG~~ie~if~~f~~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~  231 (538)
T KOG1235|consen  153 LGAPIEDIFSEFDEEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEI  231 (538)
T ss_pred             hCCCHHHHHHhcCcchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHH
Confidence            34444444432  4679999999999998765 999999987654211100                             


Q ss_pred             ------cchHHHHHH----HHHhcCCCC------eeEEEeeeecCCeEEEEEEcccc---CHHHHHHhcCCCCCHHHHHH
Q 015948           55 ------NFTALREIK----LLKELKSPH------IIELIDAFPHKGNLHLVFEFMET---DLETVIRNTNIFLSPADIKS  115 (397)
Q Consensus        55 ------~~~~~~E~~----~l~~l~hp~------iv~l~~~~~~~~~~~lv~e~~~g---~L~~~~~~~~~~l~~~~~~~  115 (397)
                            ...+.+|.+    ..+.+.|-+      |.+++  +.....-.|+||||+|   +-.+.+.+.+  ++...+..
T Consensus       232 ~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy--~~~st~RVLtME~~~G~~i~Dl~~i~~~g--i~~~~i~~  307 (538)
T KOG1235|consen  232 AKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVY--WDLSTKRVLTMEYVDGIKINDLDAIDKRG--ISPHDILN  307 (538)
T ss_pred             HhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeeh--hhcCcceEEEEEecCCccCCCHHHHHHcC--CCHHHHHH
Confidence                  001112222    222223433      33443  2234457899999997   4446666655  66665554


Q ss_pred             HHHHHHHHHHHhHhCCccccCCCCCcEEEcc----CCcEEEeeeccceeeCCC
Q 015948          116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLARIFGSP  164 (397)
Q Consensus       116 ~~~qil~aL~~lH~~~ivHrDlkp~NILl~~----~~~~kl~DFG~a~~~~~~  164 (397)
                      .+.+..  +.-+=..|++|+|=+|.||++..    ++++.+.|||+...+...
T Consensus       308 ~l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  308 KLVEAY--LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             HHHHHH--HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence            444432  12233568999999999999994    678999999999876443

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.48  E-value=1.2e-06  Score=78.11  Aligned_cols=138  Identities=18%  Similarity=0.238  Sum_probs=78.7

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEeee---ecCCeEEEEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAF---PHKGNLHLVFE   91 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~---~~~~~~~lv~e   91 (397)
                      ++.|+.|..+.||++....  ..+++|.....    .....+.+|..+++.+....  +.+++...   ......+++|+
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~   75 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME   75 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence            5789999999999997654  58999986433    22335667888888885432  44555432   33446899999


Q ss_pred             ccccC-HHH-------------------HHHhcC---CCCCHHH------HHHH---------------HHHHHH-HHHH
Q 015948           92 FMETD-LET-------------------VIRNTN---IFLSPAD------IKSY---------------MQMTLK-GLAF  126 (397)
Q Consensus        92 ~~~g~-L~~-------------------~~~~~~---~~l~~~~------~~~~---------------~~qil~-aL~~  126 (397)
                      +++|. +..                   .+....   ..+....      ....               ...+.. .++.
T Consensus        76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (239)
T PF01636_consen   76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE  155 (239)
T ss_dssp             EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence            99973 333                   011110   0001000      0000               011112 2333


Q ss_pred             hH-------hCCccccCCCCCcEEEc-cCCcEEEeeecccee
Q 015948          127 CH-------KKWVLHRDMKPNNLLIG-SHGQLKLADFGLARI  160 (397)
Q Consensus       127 lH-------~~~ivHrDlkp~NILl~-~~~~~kl~DFG~a~~  160 (397)
                      ++       ...++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus       156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence            33       24599999999999999 667678999998864

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.48  E-value=2.2e-06  Score=77.41  Aligned_cols=71  Identities=21%  Similarity=0.209  Sum_probs=49.2

Q ss_pred             eeeecCc-EEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEEEEccccC
Q 015948           19 VLGEGTY-GVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEFMETD   96 (397)
Q Consensus        19 ~LG~G~~-g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~e~~~g~   96 (397)
                      .|-.|.. +.||++..  .+..+.+|......     .....+|+.+++.+. +--+.+++++....+..++|||+++|.
T Consensus         5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~   77 (244)
T cd05150           5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV   77 (244)
T ss_pred             ecCCCCCcCeEEEEcC--CCCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence            3444544 88999854  34678888764332     224567999998884 334567788777777789999999984

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.45  E-value=1.2e-06  Score=91.25  Aligned_cols=196  Identities=19%  Similarity=0.261  Sum_probs=134.0

Q ss_pred             HHHHHHHhcCCCCeeEEEeeeecCCe----EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccc
Q 015948           60 REIKLLKELKSPHIIELIDAFPHKGN----LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH  134 (397)
Q Consensus        60 ~E~~~l~~l~hp~iv~l~~~~~~~~~----~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivH  134 (397)
                      .|+..+..+.|+|++.++.+.-....    +.+..++|.+ ++...+.. -..++...++.+..++++||+|+|+....|
T Consensus       231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~  309 (1351)
T KOG1035|consen  231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAYLHSLSLEH  309 (1351)
T ss_pred             HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHHHHHhccce
Confidence            47777888899999999887644332    2344577875 55555554 445899999999999999999999996655


Q ss_pred             cCCCCC---cEEEccCCcEEEe--eeccceeeCCCCCcccccccCceeeChhcccCccCCC--CcchHHHHHHHHHHHHh
Q 015948          135 RDMKPN---NLLIGSHGQLKLA--DFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG--AGVDVWAAGCIFAELLN  207 (397)
Q Consensus       135 rDlkp~---NILl~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~--~~~DiwSlG~il~ell~  207 (397)
                      .-|...   +-.++..+.+.+.  ||+....+......... ..+..+.++|.... ..+.  ...|+|++|.++..+..
T Consensus       310 v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~-~~~~~~~~~e~~~~-~~~~~~r~~dL~~lgll~~~~~~  387 (1351)
T KOG1035|consen  310 VVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSD-LLAEIRNADEDLKE-NTAKKSRLTDLWCLGLLLLQLSQ  387 (1351)
T ss_pred             eEEecccccccccCccceeecchhhhcccccCCCcccchhh-cCcccccccccccc-ccchhhhhhHHHHHHHHHhhhhh
Confidence            555444   3344455666766  88888877655544333 33344778887754 3333  33699999999999988


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCH-HHHHHHHHhcCcCCCCCCCHH
Q 015948          208 RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASD-DALDLLSKMFTYDPKARITAQ  286 (397)
Q Consensus       208 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dP~~R~t~~  286 (397)
                      |..+-....      .+                                ..+.+..+. ...+++.+|+.-++++|+++.
T Consensus       388 ~~~i~~~~~------~~--------------------------------~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~  429 (1351)
T KOG1035|consen  388 GEDISEKSA------VP--------------------------------VSLLDVLSTSELLDALPKCLDEDSEERLSAL  429 (1351)
T ss_pred             cCccccccc------ch--------------------------------hhhhccccchhhhhhhhhhcchhhhhccchh
Confidence            764311110      00                                011111122 678889999999999999999


Q ss_pred             HHhcCCCCCC
Q 015948          287 QALEHRYFSS  296 (397)
Q Consensus       287 e~l~hp~~~~  296 (397)
                      +++.|+|...
T Consensus       430 ~ll~~~f~~~  439 (1351)
T KOG1035|consen  430 ELLTHPFLRF  439 (1351)
T ss_pred             hhhhchhccc
Confidence            9999999764

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=2.2e-06  Score=71.46  Aligned_cols=129  Identities=19%  Similarity=0.174  Sum_probs=90.4

Q ss_pred             eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee-EEEeeeecCCeEEEEEEcc
Q 015948           15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~l~~~~~~~~~~~lv~e~~   93 (397)
                      .+.+.||+|.+|.||++..  .|..+|+|+-+...    ....+..|+++|..+.--++. +++.+-++    ++.|||+
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds----~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i   94 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDS----PRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYI   94 (201)
T ss_pred             hhhhhhhcccccEEEEeec--cCceEEEEEecCCc----chhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhh
Confidence            4577899999999999954  56799999865433    344677899999999876664 44444332    3559999


Q ss_pred             cc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCC-CCcEEEccCCcEEEeeeccceee
Q 015948           94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK-PNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        94 ~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlk-p~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      .| .|.......    +    +.-+..++++.--|-..||-|+.|. |..++|..++.+-|+||..|+.-
T Consensus        95 ~G~~L~~~~~~~----~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k  156 (201)
T COG2112          95 DGRPLGKLEIGG----D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK  156 (201)
T ss_pred             cCcchhhhhhcc----c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence            98 666554421    2    2233445566566778899999986 55555556668999999999843

>PLN02876 acyl-CoA dehydrogenase

Probab=98.40  E-value=3e-06  Score=89.79  Aligned_cols=80  Identities=18%  Similarity=0.270  Sum_probs=56.0

Q ss_pred             eeeeeeecCcEEEEEEEECCCC--cEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCe--eEEEeeeecC---CeEE
Q 015948           16 KREVLGEGTYGVVYKAIDTKTG--QTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHI--IELIDAFPHK---GNLH   87 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~i--v~l~~~~~~~---~~~~   87 (397)
                      -.+.|+.|.+..+|+......+  ..+++|+........ ....+.+|+.+|+.+. |.+|  .+++.++.+.   +..|
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~-~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f  120 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ-SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF  120 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc-cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence            3677899999999998765432  467778754332211 1235678999999995 6654  7777777654   4688


Q ss_pred             EEEEccccC
Q 015948           88 LVFEFMETD   96 (397)
Q Consensus        88 lv~e~~~g~   96 (397)
                      +||||++|.
T Consensus       121 lVME~v~G~  129 (822)
T PLN02876        121 YIMEYLEGR  129 (822)
T ss_pred             EEEEecCCc
Confidence            999999984

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.30  E-value=1.9e-05  Score=68.49  Aligned_cols=129  Identities=20%  Similarity=0.338  Sum_probs=92.5

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCC--------------ccCCccchHHHHHHHHHhcC------CCCeeEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--------------QKEGVNFTALREIKLLKELK------SPHIIEL   76 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~--------------~~~~~~~~~~~E~~~l~~l~------hp~iv~l   76 (397)
                      ...||+|+.-.||.-   ..+....||++....              ..........+|+.-...+.      +.+|.++
T Consensus         6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            457899999999874   345677889987665              11112234456776666665      7899999


Q ss_pred             EeeeecCCeEEEEEEccc---c----CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-
Q 015948           77 IDAFPHKGNLHLVFEFME---T----DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-  148 (397)
Q Consensus        77 ~~~~~~~~~~~lv~e~~~---g----~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-  148 (397)
                      ++..+++...-+|+|.+.   |    +|.+++.+..  +++ ...   ..+-+-.+||-+.+|+.+||+|.||++...+ 
T Consensus        83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~--~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~  156 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG--LTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS  156 (199)
T ss_pred             eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC--ccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence            999999999999999874   3    4666664432  555 333   3344556788999999999999999997543 


Q ss_pred             ---cEEEee
Q 015948          149 ---QLKLAD  154 (397)
Q Consensus       149 ---~~kl~D  154 (397)
                         .+.|+|
T Consensus       157 ~~~~lvlID  165 (199)
T PF10707_consen  157 GEFRLVLID  165 (199)
T ss_pred             CceEEEEEe
Confidence               477777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.21  E-value=1.7e-05  Score=68.24  Aligned_cols=128  Identities=26%  Similarity=0.268  Sum_probs=88.0

Q ss_pred             hcceeeeeeeeecCc-EEEEEEEECCCCcEEEEEEeecCC---c-------c--C-------CccchHHHHHHHHHhc--
Q 015948           11 ADRYLKREVLGEGTY-GVVYKAIDTKTGQTVAIKKIRLGK---Q-------K--E-------GVNFTALREIKLLKEL--   68 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~-g~Vy~a~~~~~~~~~aiK~i~~~~---~-------~--~-------~~~~~~~~E~~~l~~l--   68 (397)
                      ...++.++.||.|.- |.||+++.  .|+.||+|+++.-.   .       .  +       ....-+..|.....+|  
T Consensus        36 ~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke  113 (207)
T PF13095_consen   36 GDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE  113 (207)
T ss_pred             CCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence            378999999999999 99999954  57899999943211   0       0  0       1112344566665555  


Q ss_pred             -CCCCe--eEEEeeeecC------------------CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q 015948           69 -KSPHI--IELIDAFPHK------------------GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC  127 (397)
Q Consensus        69 -~hp~i--v~l~~~~~~~------------------~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~l  127 (397)
                       .+.++  |+.+++..-.                  ...-||.||+...-         .+....    +.+|++-+..+
T Consensus       114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~~----~~~~~~dl~~~  180 (207)
T PF13095_consen  114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIRD----IPQMLRDLKIL  180 (207)
T ss_pred             ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchhH----HHHHHHHHHHH
Confidence             45566  8888876111                  12457888876443         133333    45677788899


Q ss_pred             HhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948          128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus       128 H~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                      |..||+-+|+++.|..   +  =||+|||.+
T Consensus       181 ~k~gI~~~Dv~~~ny~---~--G~lvDfs~~  206 (207)
T PF13095_consen  181 HKLGIVPRDVKPRNYR---G--GKLVDFSSS  206 (207)
T ss_pred             HHCCeeeccCcccccc---C--CEEEecccC
Confidence            9999999999999998   3  489999865

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=98.19  E-value=1.1e-07  Score=100.91  Aligned_cols=218  Identities=13%  Similarity=0.007  Sum_probs=148.1

Q ss_pred             CCccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeEEEEEEccc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHH
Q 015948           52 EGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHLVFEFME-TDLETVIRNTNI---FLSPADIKSYMQMTLKGLA  125 (397)
Q Consensus        52 ~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~lv~e~~~-g~L~~~~~~~~~---~l~~~~~~~~~~qil~aL~  125 (397)
                      +...+....|.+.++...|+++.....-...  ....|.+++||. |++...+.+...   .+...-+.....+.+.+..
T Consensus      1270 ePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~ 1349 (2724)
T KOG1826|consen 1270 EPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRN 1349 (2724)
T ss_pred             hHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccc
Confidence            3334445567777778899999887666543  335689999998 788888876532   2344444444555466777


Q ss_pred             HhHhCC-----ccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHH
Q 015948          126 FCHKKW-----VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGC  200 (397)
Q Consensus       126 ~lH~~~-----ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~  200 (397)
                      -+|+..     .+|++||+.|.+|..+.++|+.++|+.++........+..++++.|+++++... ..++.++|+|..|+
T Consensus      1350 ~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~-ik~t~rsdilr~s~ 1428 (2724)
T KOG1826|consen 1350 VILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE-IKFTKRSDILRRSL 1428 (2724)
T ss_pred             hhhhcccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH-HhhhhHHHHHHHHH
Confidence            777542     799999999999999999999999999966666666777888889999998765 55788899999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCC
Q 015948          201 IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPK  280 (397)
Q Consensus       201 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~  280 (397)
                      .+|++..|.++|...     +..+.++.-                      ......++...-+.++-.....+|-+.-.
T Consensus      1429 ~ly~rs~~n~~fi~f-----lq~~Lkgii----------------------dn~tf~sIe~l~pgdaNve~~~~Ll~K~~ 1481 (2724)
T KOG1826|consen 1429 SLYLRSDGNAYFIFF-----LQPALKGII----------------------DNHTFFSIEKLKPGDANVEALHRLLWKYM 1481 (2724)
T ss_pred             HHHHHhcccHHHHHH-----HHHHHcCcc----------------------cccccccccccCCCcccHHHHHHHHHHhh
Confidence            999999888776422     222222111                      00111111111133444444445555667


Q ss_pred             CCCCHHHHhcCCCCCCC
Q 015948          281 ARITAQQALEHRYFSSA  297 (397)
Q Consensus       281 ~R~t~~e~l~hp~~~~~  297 (397)
                      .||.-...+.-+.|...
T Consensus      1482 ~rp~q~isls~d~~a~~ 1498 (2724)
T KOG1826|consen 1482 ERPGQYISLSRDHFAVG 1498 (2724)
T ss_pred             hcchhhhhccccccccc
Confidence            88998888887777543

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.11  E-value=5e-05  Score=68.11  Aligned_cols=72  Identities=17%  Similarity=0.245  Sum_probs=46.4

Q ss_pred             eeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCCeEEEEEEccc
Q 015948           17 REVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      .+.|..|-...+|++.... .++.|++|+......   ......+|+.+++.+...+ ..+++..+. +   .+||||++
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i~   75 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---LIIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFIP   75 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---ceecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEeeC
Confidence            4677888889999996443 356888997643211   1123347999999885433 344544443 2   37999998


Q ss_pred             c
Q 015948           95 T   95 (397)
Q Consensus        95 g   95 (397)
                      |
T Consensus        76 G   76 (235)
T cd05157          76 G   76 (235)
T ss_pred             C
Confidence            7

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.09  E-value=1.3e-05  Score=72.09  Aligned_cols=70  Identities=14%  Similarity=0.173  Sum_probs=43.0

Q ss_pred             eeeeeecCcE-EEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCC---CeeEEEeeeecC---CeEEEE
Q 015948           17 REVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP---HIIELIDAFPHK---GNLHLV   89 (397)
Q Consensus        17 ~~~LG~G~~g-~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp---~iv~l~~~~~~~---~~~~lv   89 (397)
                      .+.|+.|+.. .||+.     +..+++|..+..    .....+.+|.++|..+...   -+.++++.....   +..|++
T Consensus         2 ~~~~~~gG~~n~vy~~-----~~~~VlR~~~~~----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l   72 (235)
T cd05155           2 IEPVDSGGTDNATFRL-----GDDMSVRLPSAA----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV   72 (235)
T ss_pred             ceeccCCCcccceEEc-----CCceEEEcCCcc----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence            3567777776 48976     235777864321    1233577899999888532   234444443332   245889


Q ss_pred             EEcccc
Q 015948           90 FEFMET   95 (397)
Q Consensus        90 ~e~~~g   95 (397)
                      |++++|
T Consensus        73 ~~~i~G   78 (235)
T cd05155          73 YRWLEG   78 (235)
T ss_pred             EEeecC
Confidence            999987

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=98.00  E-value=3.6e-05  Score=72.07  Aligned_cols=137  Identities=14%  Similarity=0.102  Sum_probs=79.2

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEeee------ecCCeEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAF------PHKGNLHL   88 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~------~~~~~~~l   88 (397)
                      .+.++.|....+|++.. . +..+++|+......    ...+..|+.++..|....  +.+++...      ...+..++
T Consensus        27 i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~----~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~  100 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVK----AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPAC  100 (307)
T ss_pred             ccccCCccccceEEEEe-C-CCcEEEEEecCCCC----HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEE
Confidence            45567777789999853 2 34677897654221    123446777887774322  34443321      23466889


Q ss_pred             EEEccccCH-----H----------HHHHhcCCCCCH-------HHHH----------------HHHHHHHHHHHHhH--
Q 015948           89 VFEFMETDL-----E----------TVIRNTNIFLSP-------ADIK----------------SYMQMTLKGLAFCH--  128 (397)
Q Consensus        89 v~e~~~g~L-----~----------~~~~~~~~~l~~-------~~~~----------------~~~~qil~aL~~lH--  128 (397)
                      |++|++|..     .          ..++.....++.       ...+                .....+...++++.  
T Consensus       101 l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~  180 (307)
T TIGR00938       101 LVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKF  180 (307)
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhh
Confidence            999998721     1          111211111100       0000                01112233455553  


Q ss_pred             -----hCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948          129 -----KKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus       129 -----~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                           ..+++|+|+++.||+++.++.+.|+||+.+.
T Consensus       181 ~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       181 WPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             hhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence                 2689999999999999988877899999875

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.98  E-value=3.4e-05  Score=71.80  Aligned_cols=137  Identities=16%  Similarity=0.092  Sum_probs=80.5

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEee------eecCCeEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDA------FPHKGNLHL   88 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~------~~~~~~~~l   88 (397)
                      .+.|..|....+|+...  .+..+++|+...     .....+..|+.++..+.+.+  +.+++..      ....+..++
T Consensus        19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-----~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~   91 (296)
T cd05153          19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK-----VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAA   91 (296)
T ss_pred             eecccCccccceEEEEe--CCCcEEEEEcCC-----CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEE
Confidence            55677787789999853  345788898653     11224556888888884322  4444432      133456789


Q ss_pred             EEEccccCHH---------------HHHHhcCCCCCH--------HHHH------------HHHHHHHHHHHHhHh----
Q 015948           89 VFEFMETDLE---------------TVIRNTNIFLSP--------ADIK------------SYMQMTLKGLAFCHK----  129 (397)
Q Consensus        89 v~e~~~g~L~---------------~~~~~~~~~l~~--------~~~~------------~~~~qil~aL~~lH~----  129 (397)
                      |++|++|...               ..++.....+..        ....            .....+..++.++.+    
T Consensus        92 l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~  171 (296)
T cd05153          92 LVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPS  171 (296)
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhh
Confidence            9999987321               111111000000        0000            011112233444443    


Q ss_pred             ---CCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          130 ---KWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       130 ---~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                         .+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus       172 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         172 DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             cCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence               4799999999999999887778999998863

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.95  E-value=0.00024  Score=68.34  Aligned_cols=77  Identities=18%  Similarity=0.164  Sum_probs=52.6

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---c--CCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---K--EGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---~--~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~l   88 (397)
                      .+.||.|.+..||++.....++.++||.-.....   .  .-...+...|...|+.+.   -.++.+++.+  +.+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            4679999999999998864446899997542211   0  112234567888888863   2456777666  3455789


Q ss_pred             EEEcccc
Q 015948           89 VFEFMET   95 (397)
Q Consensus        89 v~e~~~g   95 (397)
                      ||||+++
T Consensus       109 VME~L~~  115 (401)
T PRK09550        109 VMEDLSD  115 (401)
T ss_pred             EEecCCC
Confidence            9999985

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.88  E-value=7.9e-05  Score=67.81  Aligned_cols=133  Identities=22%  Similarity=0.242  Sum_probs=76.8

Q ss_pred             eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEEEEccccCH
Q 015948           19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLVFEFMETDL   97 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv~e~~~g~L   97 (397)
                      .+..|-.+.+|+..  .++..+++|........  ......+|..+++.+..-.+ .+++....    -++||||++|..
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~--~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~   74 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKA--LGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEV   74 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCccccc--ccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcc
Confidence            35667888999885  45678888875432211  11234679999999865333 33443332    258999998732


Q ss_pred             HH---------------H---HHhcC---CCCCH-HHHHHHHHHH---------HHHHHHhHh--------CCccccCCC
Q 015948           98 ET---------------V---IRNTN---IFLSP-ADIKSYMQMT---------LKGLAFCHK--------KWVLHRDMK  138 (397)
Q Consensus        98 ~~---------------~---~~~~~---~~l~~-~~~~~~~~qi---------l~aL~~lH~--------~~ivHrDlk  138 (397)
                      ..               .   ++...   ..++. ..+..+..++         ...+..+-.        ..++|+|+.
T Consensus        75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~  154 (256)
T TIGR02721        75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH  154 (256)
T ss_pred             cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence            11               1   11111   11121 1222222222         111222211        258999999


Q ss_pred             CCcEEEccCCcEEEeeecccee
Q 015948          139 PNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       139 p~NILl~~~~~~kl~DFG~a~~  160 (397)
                      |.||+++.++ +.|+||+.|..
T Consensus       155 ~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       155 AYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             cCcEEEeCCC-CEEEeccccCc
Confidence            9999999877 88999998864

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.87  E-value=7e-05  Score=69.61  Aligned_cols=145  Identities=23%  Similarity=0.259  Sum_probs=97.9

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc----cCC--------------------ccchHHHHHHHHHhcCCC
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ----KEG--------------------VNFTALREIKLLKELKSP   71 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~----~~~--------------------~~~~~~~E~~~l~~l~hp   71 (397)
                      |...|..|.-+.||.|.. ..|..+|||+.+-+-.    .+.                    ....+..|+.-|++|..-
T Consensus       148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            345577899999999974 4678899998753310    000                    011233577778887654


Q ss_pred             CeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCcEEEccCCcE
Q 015948           72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC-HKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        72 ~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~l-H~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      .|.-.--+.  =....|||+|++++-+..-+-.+..++...+..+-.+++.-+.-| |.+++||.||.=-|+|+ .+|.+
T Consensus       227 GIP~PePIl--Lk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~l  303 (520)
T KOG2270|consen  227 GIPCPEPIL--LKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGKL  303 (520)
T ss_pred             CCCCCCcee--eecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCEE
Confidence            432111011  023469999999654443333455688888998888888888877 56789999999999999 46779


Q ss_pred             EEeeeccceeeCCC
Q 015948          151 KLADFGLARIFGSP  164 (397)
Q Consensus       151 kl~DFG~a~~~~~~  164 (397)
                      .|+|.+-+.....+
T Consensus       304 yiIDVSQSVE~DHP  317 (520)
T KOG2270|consen  304 YIIDVSQSVEHDHP  317 (520)
T ss_pred             EEEEccccccCCCh
Confidence            99999887665443

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.82  E-value=5.9e-05  Score=65.09  Aligned_cols=98  Identities=19%  Similarity=0.199  Sum_probs=77.6

Q ss_pred             HHHHHHHhcCC-CCeeEEEeeeecCCeEEEEEEccc-cCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHhHh---CCc
Q 015948           60 REIKLLKELKS-PHIIELIDAFPHKGNLHLVFEFME-TDLETVIR--NTNIFLSPADIKSYMQMTLKGLAFCHK---KWV  132 (397)
Q Consensus        60 ~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~~--~~~~~l~~~~~~~~~~qil~aL~~lH~---~~i  132 (397)
                      .|.-+|+.+.+ +++.++++++.+    ++|.||.+ +.+.....  ..-...++.....++.++++.+.+++.   ..+
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~   83 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF   83 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence            58889999987 799999999933    46899998 45532100  011125788899999999999999987   458


Q ss_pred             cccCCCCCcEEEccCCcEEEeeeccceee
Q 015948          133 LHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus       133 vHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      .-.|++|+|+-|+++|++|++|...+...
T Consensus        84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             EEeecchHHeEEeCCCcEEEEechhcchh
Confidence            88999999999999999999999887544

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK05231 homoserine kinase; Provisional

Probab=97.82  E-value=0.00025  Score=66.73  Aligned_cols=31  Identities=26%  Similarity=0.312  Sum_probs=26.5

Q ss_pred             CCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       130 ~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      .|++|+|+.|.|||++.+...-|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            4899999999999998665568999998863

>PRK10593 hypothetical protein; Provisional

Probab=97.78  E-value=0.00037  Score=64.85  Aligned_cols=77  Identities=18%  Similarity=0.196  Sum_probs=53.3

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC---CCeeEEEeeeec---CCeE
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIELIDAFPH---KGNL   86 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~l~~~~~~---~~~~   86 (397)
                      .-.-.+.||.|..+.||..... ++ .+.+|..+ ..   .....+..|...|+.|..   -.+.++++.+..   .+..
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~-~~---~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~   88 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDS-QG-NPMPLMAR-SF---STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPD   88 (297)
T ss_pred             hhheeeecCCccceeEEEEEcC-CC-CEEEEEec-cc---ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCe
Confidence            3444678999999999998533 23 46677642 21   112356789999998853   357778876644   4678


Q ss_pred             EEEEEcccc
Q 015948           87 HLVFEFMET   95 (397)
Q Consensus        87 ~lv~e~~~g   95 (397)
                      ++|||+++|
T Consensus        89 ~LVmE~i~G   97 (297)
T PRK10593         89 VLLLERLRG   97 (297)
T ss_pred             EEEEeccCC
Confidence            999999986

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.69  E-value=0.00033  Score=65.41  Aligned_cols=72  Identities=18%  Similarity=0.272  Sum_probs=45.8

Q ss_pred             eeeeeecCcEEEEEEEECC------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEE
Q 015948           17 REVLGEGTYGVVYKAIDTK------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLV   89 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv   89 (397)
                      .+.|..|-...||++....      .++.|++|+......   ......+|+.+++.+....+ .+++.++. +   .+|
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v   75 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE---LLIDRERELVVFARLSERNLGPKLYGIFP-N---GRI   75 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc---ceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cch
Confidence            3556677778999986533      257899998654321   12245679989988864333 34555553 2   257


Q ss_pred             EEcccc
Q 015948           90 FEFMET   95 (397)
Q Consensus        90 ~e~~~g   95 (397)
                      +||++|
T Consensus        76 ~e~i~G   81 (302)
T cd05156          76 EEFIPS   81 (302)
T ss_pred             hheeCC
Confidence            899887

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.64  E-value=3e-05  Score=70.87  Aligned_cols=140  Identities=20%  Similarity=0.294  Sum_probs=96.5

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---------------cCCc-----cchHHHHHHHHHhcCC--C
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---------------KEGV-----NFTALREIKLLKELKS--P   71 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---------------~~~~-----~~~~~~E~~~l~~l~h--p   71 (397)
                      |.+.+.||-|.-+.||.+-+. .|..+++|.-+....               ....     ...+.+|...|+.|..  =
T Consensus        94 ~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            567889999999999999764 678899886543221               0000     1124578888888843  2


Q ss_pred             CeeEEEeeeecCCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948           72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        72 ~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      -|.+.+|+    ...++|||++.| .|.+.-.-       ..+..+...+..-+.-|-.+|+||+|..==||+|.+++.+
T Consensus       173 pVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v-------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i  241 (465)
T KOG2268|consen  173 PVPKPIDH----NRHCVVMELVDGYPLRQVRHV-------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKI  241 (465)
T ss_pred             CCCCcccc----cceeeHHHhhcccceeeeeec-------CChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCE
Confidence            24444443    456789999987 44433221       2234455666667778889999999999999999999999


Q ss_pred             EEeeeccceeeCCCC
Q 015948          151 KLADFGLARIFGSPD  165 (397)
Q Consensus       151 kl~DFG~a~~~~~~~  165 (397)
                      +++||--......+.
T Consensus       242 ~vIDFPQmvS~sh~n  256 (465)
T KOG2268|consen  242 VVIDFPQMVSTSHPN  256 (465)
T ss_pred             EEeechHhhccCCCc
Confidence            999997665444433

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.61  E-value=0.00099  Score=62.83  Aligned_cols=82  Identities=16%  Similarity=0.122  Sum_probs=51.9

Q ss_pred             eeeecCcEEEEEEEECCCCcEEEEEEeecCC-----ccCCccchHHHHHHHHHhcCC--CC-eeEEEeeeecCCeEEEEE
Q 015948           19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-----QKEGVNFTALREIKLLKELKS--PH-IIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~E~~~l~~l~h--p~-iv~l~~~~~~~~~~~lv~   90 (397)
                      .||.|...-||++.+...++.++||.-....     ...-...+...|...|+...-  |. +.+++ +| +.....+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy-~~-D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF-HF-DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE-EE-ccccceehH
Confidence            5799999999999976444689999653211     112223355678888887742  53 44454 33 555667899


Q ss_pred             Ecccc--CHHHHHH
Q 015948           91 EFMET--DLETVIR  102 (397)
Q Consensus        91 e~~~g--~L~~~~~  102 (397)
                      |+++.  .+...+.
T Consensus        80 EdL~~~~ilR~~Li   93 (370)
T TIGR01767        80 EDLSHHKIARKGLI   93 (370)
T ss_pred             hhCccchHHHHHHH
Confidence            99973  3444443

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.55  E-value=0.00017  Score=69.74  Aligned_cols=172  Identities=21%  Similarity=0.279  Sum_probs=109.4

Q ss_pred             hHHHHHHHHHhcCCCCeeEEEeeeec-CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCcccc
Q 015948           57 TALREIKLLKELKSPHIIELIDAFPH-KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR  135 (397)
Q Consensus        57 ~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHr  135 (397)
                      .++-...+++.+.|+|....+++-.. .....+|+|+++-+|.+..+.++  +-...       ++       .+|+.|-
T Consensus        28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s-------~~-------~~~~~~~   91 (725)
T KOG1093|consen   28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDES-------LL-------AHGVLHL   91 (725)
T ss_pred             HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhh-------hc-------cccccee
Confidence            45567889999999999999887643 33588999999999999887654  21111       11       2222222


Q ss_pred             CCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 015948          136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS  215 (397)
Q Consensus       136 Dlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  215 (397)
                           |       .++++| -++..                |  |-      ..++++||||+|.++.++.-|...+..-
T Consensus        92 -----~-------~~~~td-~~~t~----------------~--~~------~~~pKsdVwsl~~i~~el~L~~~l~~~~  134 (725)
T KOG1093|consen   92 -----N-------IIYITD-HFLTK----------------Y--PS------PIGPKSDVWSLGFIILELYLGISLEAEL  134 (725)
T ss_pred             -----h-------hhhccc-ccccc----------------C--CC------CCCcchhhhhHHHHHHHHHHhhHHHHHH
Confidence                 1       133344 11100                1  11      1225999999999999999998888777


Q ss_pred             CcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          216 SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       216 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                      ...+.+..+.+.+-......      ..  ..        ...+.-.++....+++.+|+...|..||...++.+++-|.
T Consensus       135 ~~s~~l~~i~k~~~~d~~~~------~~--a~--------e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~  198 (725)
T KOG1093|consen  135 TESEYLEILLKYYTDDQELL------ST--AM--------EHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFT  198 (725)
T ss_pred             HHHHHHHHHHHhccCchhHH------HH--HH--------HHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHH
Confidence            77777666655422110000      00  00        0011112356678899999999999999999999999887


Q ss_pred             CC
Q 015948          296 SA  297 (397)
Q Consensus       296 ~~  297 (397)
                      .+
T Consensus       199 ev  200 (725)
T KOG1093|consen  199 EV  200 (725)
T ss_pred             HH
Confidence            54

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.48  E-value=0.00086  Score=64.01  Aligned_cols=84  Identities=17%  Similarity=0.150  Sum_probs=53.8

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCC----ccCCccchHHHHHHHHHhcCC--C-CeeEEEeeeecCCeEEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK----QKEGVNFTALREIKLLKELKS--P-HIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~----~~~~~~~~~~~E~~~l~~l~h--p-~iv~l~~~~~~~~~~~lv   89 (397)
                      .+.||.|.-.-||++.+...++-++||.-....    ...-...+...|..+|+.+.-  | ++.+++. | +.....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~-~-D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL-F-DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE-E-CcHHhhHH
Confidence            668899999999999885445679998643221    112223455668899888742  5 4445543 3 55666788


Q ss_pred             EEcccc--CHHHHHH
Q 015948           90 FEFMET--DLETVIR  102 (397)
Q Consensus        90 ~e~~~g--~L~~~~~  102 (397)
                      ||+++.  .|...+.
T Consensus       112 MEdL~~~~ilR~~Li  126 (409)
T PRK12396        112 MEDLSDHTILRTALI  126 (409)
T ss_pred             HHhCcccHHHHHHHH
Confidence            999963  3444433

>PLN02236 choline kinase

Probab=97.35  E-value=0.0026  Score=60.49  Aligned_cols=140  Identities=17%  Similarity=0.217  Sum_probs=80.7

Q ss_pred             eeeeeeeeecCcEEEEEEEECC----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee-EEEeeeecCCeEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTK----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHL   88 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~l~~~~~~~~~~~l   88 (397)
                      ..-...|-.|-...+|++....    .++.|++|+.....  + ......+|..+++.+..-++. ++++.+..+    .
T Consensus        38 ~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~-~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~  110 (344)
T PLN02236         38 ALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--E-LFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----R  110 (344)
T ss_pred             cEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--C-eeechHHHHHHHHHHHHcCCCCceEEEECCc----e
Confidence            3334556568888999986432    34689999765432  1 222335799999998654443 455666433    5


Q ss_pred             EEEccccCHHH-----------H-------HHhcCCC-----CCHHHHHHHHHHHH--------------------HHHH
Q 015948           89 VFEFMETDLET-----------V-------IRNTNIF-----LSPADIKSYMQMTL--------------------KGLA  125 (397)
Q Consensus        89 v~e~~~g~L~~-----------~-------~~~~~~~-----l~~~~~~~~~~qil--------------------~aL~  125 (397)
                      |.+|++|..+.           .       ++....+     .....+..+..++.                    ..|.
T Consensus       111 v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~  190 (344)
T PLN02236        111 VEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLE  190 (344)
T ss_pred             EEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHH
Confidence            78898762211           0       1111111     11122333332211                    1111


Q ss_pred             H-h----HhCCccccCCCCCcEEEcc-CCcEEEeeecccee
Q 015948          126 F-C----HKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARI  160 (397)
Q Consensus       126 ~-l----H~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~  160 (397)
                      . +    +...++|+|+++.|||++. ++.+.|+||..|..
T Consensus       191 ~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        191 KELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             HHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            1 1    1235899999999999986 47899999988863

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.32  E-value=0.0025  Score=60.26  Aligned_cols=139  Identities=18%  Similarity=0.270  Sum_probs=79.5

Q ss_pred             eeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEEE
Q 015948           15 LKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLVF   90 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv~   90 (397)
                      ...+.|..|-...+|++.....   +..|++|+......   ......+|..+++.+..-++ .++++++. ++   +|.
T Consensus        17 i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~---~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~   89 (330)
T PLN02421         17 FSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD---YVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQ   89 (330)
T ss_pred             eEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC---eEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---Eee
Confidence            3455566688888999865432   34788997654321   22233579999999976555 35565563 33   588


Q ss_pred             EccccCHHH------------------HHHhcCCC----C-CHHHHHHHHHHH-------------------------HH
Q 015948           91 EFMETDLET------------------VIRNTNIF----L-SPADIKSYMQMT-------------------------LK  122 (397)
Q Consensus        91 e~~~g~L~~------------------~~~~~~~~----l-~~~~~~~~~~qi-------------------------l~  122 (397)
                      +|++|..+.                  .++....+    . -...+..|..++                         +.
T Consensus        90 ~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  169 (330)
T PLN02421         90 SFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIV  169 (330)
T ss_pred             hhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHH
Confidence            888763211                  11111111    1 112222232221                         11


Q ss_pred             HHHHh-HhC----CccccCCCCCcEEEcc-CCcEEEeeecccee
Q 015948          123 GLAFC-HKK----WVLHRDMKPNNLLIGS-HGQLKLADFGLARI  160 (397)
Q Consensus       123 aL~~l-H~~----~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~  160 (397)
                      .+..+ ...    -++|+|+.+.|||++. ++.++++||+.|..
T Consensus       170 ~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        170 ELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             HHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            11111 122    2899999999999975 47899999998853

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.29  E-value=0.003  Score=59.14  Aligned_cols=29  Identities=21%  Similarity=0.400  Sum_probs=25.8

Q ss_pred             CCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948          130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus       130 ~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      .+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            57999999999999987 678999999775

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.16  E-value=0.0022  Score=58.93  Aligned_cols=30  Identities=27%  Similarity=0.558  Sum_probs=25.7

Q ss_pred             CccccCCCCCcEEEccCCc-EEEeeecccee
Q 015948          131 WVLHRDMKPNNLLIGSHGQ-LKLADFGLARI  160 (397)
Q Consensus       131 ~ivHrDlkp~NILl~~~~~-~kl~DFG~a~~  160 (397)
                      .++|+|++|.|||++.++. +-|+||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            4899999999999987565 46999999875

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.15  E-value=0.0043  Score=57.76  Aligned_cols=144  Identities=16%  Similarity=0.182  Sum_probs=78.8

Q ss_pred             eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC--CCeeEEEeeeecCC--eEEEEE
Q 015948           15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PHIIELIDAFPHKG--NLHLVF   90 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~l~~~~~~~~--~~~lv~   90 (397)
                      .+.+.+-.|.--.+|...+.  ++.+++. ...............+|..+++.+.-  --+...+..+.++.  ..|.||
T Consensus        28 ~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~  104 (321)
T COG3173          28 LIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVM  104 (321)
T ss_pred             ceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEE
Confidence            44555534433444555433  7888888 33212222223345578888888743  22333455554444  679999


Q ss_pred             EccccC----------HH-HHHH-----------hc---CC-------CCCHHHHHHHHHHH--------------HHHH
Q 015948           91 EFMETD----------LE-TVIR-----------NT---NI-------FLSPADIKSYMQMT--------------LKGL  124 (397)
Q Consensus        91 e~~~g~----------L~-~~~~-----------~~---~~-------~l~~~~~~~~~~qi--------------l~aL  124 (397)
                      +|++|.          .. ....           +-   +.       .....++..+..+.              ..-.
T Consensus       105 ~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~  184 (321)
T COG3173         105 EWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLI  184 (321)
T ss_pred             EEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHH
Confidence            999881          11 1111           00   00       00111122222221              1223


Q ss_pred             HHhHh--------CCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948          125 AFCHK--------KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus       125 ~~lH~--------~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      .+++.        ..++|+|+++.||+|+.++-+=|.||+++...
T Consensus       185 ~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         185 KWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             HHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            33332        24999999999999999988999999999753

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=97.08  E-value=0.0079  Score=56.32  Aligned_cols=30  Identities=13%  Similarity=0.187  Sum_probs=27.8

Q ss_pred             CccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          131 WVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       131 ~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      +++|+|+.+.|||++.++.+-|+||..++.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            799999999999999999999999998864

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.03  E-value=0.014  Score=56.14  Aligned_cols=76  Identities=18%  Similarity=0.187  Sum_probs=51.8

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-c----CCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEE
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-K----EGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~----~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~   87 (397)
                      ..+.||.|....||+..+.  +..|+||.-..... .    .-...+...|...|+.+.   -.++.+++.+.+  +..+
T Consensus        36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v  111 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL  111 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence            4678899999999999763  45688997652221 1    112344556788887764   247778887775  4467


Q ss_pred             EEEEcccc
Q 015948           88 LVFEFMET   95 (397)
Q Consensus        88 lv~e~~~g   95 (397)
                      ++|||+++
T Consensus       112 lvME~L~~  119 (418)
T PLN02756        112 IGMRYLEP  119 (418)
T ss_pred             EEEeecCC
Confidence            88999976

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.79  E-value=0.0045  Score=57.88  Aligned_cols=74  Identities=26%  Similarity=0.305  Sum_probs=58.2

Q ss_pred             cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           82 HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        82 ~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      ...+.|++|++-++.+...-.     -..+++..++++.+..++-+..+ ..-|||+.-.||||+ +|+|.|+||-+++.
T Consensus       297 e~~y~yl~~kdhgt~is~ik~-----~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         297 ETLYLYLHFKDHGTPISIIKA-----DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             CceEEEEEEecCCceeeeeec-----ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            345778889988876653322     34577788888888777777666 489999999999999 99999999999985


Q ss_pred             e
Q 015948          161 F  161 (397)
Q Consensus       161 ~  161 (397)
                      -
T Consensus       371 ~  371 (488)
T COG5072         371 S  371 (488)
T ss_pred             c
Confidence            3

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.70  E-value=0.027  Score=51.99  Aligned_cols=73  Identities=21%  Similarity=0.165  Sum_probs=47.4

Q ss_pred             eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEEEEE
Q 015948           15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      +-.+.++.|....+|...  .+++.|.||+-.     ......+..|..-|+.|.   --.+.+++.+...++.-|||||
T Consensus        20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~-----~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle   92 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS-----ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLE   92 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE-----GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE
T ss_pred             eeeEecCCCChhheEEEE--CCCccEEEEecC-----hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEE
Confidence            345678889999999985  677889999865     222335677999898883   2456788888777777799999


Q ss_pred             ccc
Q 015948           92 FME   94 (397)
Q Consensus        92 ~~~   94 (397)
                      |++
T Consensus        93 ~l~   95 (288)
T PF03881_consen   93 FLE   95 (288)
T ss_dssp             ---
T ss_pred             eec
Confidence            987

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PTZ00384 choline kinase; Provisional

Probab=96.66  E-value=0.02  Score=55.10  Aligned_cols=78  Identities=15%  Similarity=0.191  Sum_probs=45.4

Q ss_pred             eeeeeeeecCcEEEEEEEECCC-CcEEEEEE-eec-CCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEEE
Q 015948           15 LKREVLGEGTYGVVYKAIDTKT-GQTVAIKK-IRL-GKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLVF   90 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~-~~~~aiK~-i~~-~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv~   90 (397)
                      ...+.|..|-...+|++..... +..+.+|. +.. ............+|+.+++.+...++ .++++.|..    ++|.
T Consensus        53 i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~  128 (383)
T PTZ00384         53 IEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQ  128 (383)
T ss_pred             EEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEE
Confidence            3455666688899999965432 22333332 111 11222222234579999999976555 456666643    4899


Q ss_pred             EccccC
Q 015948           91 EFMETD   96 (397)
Q Consensus        91 e~~~g~   96 (397)
                      ||++|.
T Consensus       129 efIeGr  134 (383)
T PTZ00384        129 EWVEGN  134 (383)
T ss_pred             EEeccc
Confidence            999873

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.53  E-value=0.0057  Score=53.83  Aligned_cols=30  Identities=40%  Similarity=0.691  Sum_probs=21.6

Q ss_pred             CccccCCCCCcEEE-ccCCcEEEeeecccee
Q 015948          131 WVLHRDMKPNNLLI-GSHGQLKLADFGLARI  160 (397)
Q Consensus       131 ~ivHrDlkp~NILl-~~~~~~kl~DFG~a~~  160 (397)
                      .++|+||.|.|||+ +.++.++|+||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            59999999999999 8889999999998864

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PRK06148 hypothetical protein; Provisional

Probab=96.42  E-value=0.032  Score=60.72  Aligned_cols=31  Identities=32%  Similarity=0.513  Sum_probs=26.6

Q ss_pred             CCccccCCCCCcEEEccCC--cEE-Eeeecccee
Q 015948          130 KWVLHRDMKPNNLLIGSHG--QLK-LADFGLARI  160 (397)
Q Consensus       130 ~~ivHrDlkp~NILl~~~~--~~k-l~DFG~a~~  160 (397)
                      +++||+|+.+.|||++.++  ++. |+|||.+..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            5799999999999999875  555 999998864

>PTZ00296 choline kinase; Provisional

Probab=96.21  E-value=0.064  Score=52.72  Aligned_cols=74  Identities=12%  Similarity=0.221  Sum_probs=46.2

Q ss_pred             eeeeeeecCcEEEEEEEECC--------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee-EEEeeeecCCeE
Q 015948           16 KREVLGEGTYGVVYKAIDTK--------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNL   86 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~--------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~l~~~~~~~~~~   86 (397)
                      -.+.|..|-.-.+|++....        .++.|.+++.....  +. .....+|..+++.+..-+|- ++++.|. +   
T Consensus       109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t--e~-lIdR~~E~~v~~~ls~~gi~P~l~~~f~-g---  181 (442)
T PTZ00296        109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV--DE-LYNPISEFEVYKTMSKYRIAPQLLNTFS-G---  181 (442)
T ss_pred             EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc--cc-eeCHHHHHHHHHHHHHCCCCCceEEEeC-C---
Confidence            46667777778899986442        14678888764322  11 12345688888888655553 4556653 2   


Q ss_pred             EEEEEccccC
Q 015948           87 HLVFEFMETD   96 (397)
Q Consensus        87 ~lv~e~~~g~   96 (397)
                      +.|.||++|.
T Consensus       182 g~I~efi~g~  191 (442)
T PTZ00296        182 GRIEEWLYGD  191 (442)
T ss_pred             CEEEEeeCCc
Confidence            2578888864

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.10  E-value=0.024  Score=49.55  Aligned_cols=84  Identities=19%  Similarity=0.282  Sum_probs=58.0

Q ss_pred             HHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh--CCcccc
Q 015948           58 ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK--KWVLHR  135 (397)
Q Consensus        58 ~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~--~~ivHr  135 (397)
                      +..+..++.++.  .|+++..=  +.-.+-++.|+|-.-            .... ..++..-+.+|.-.|+  .+.+|+
T Consensus       105 y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~------------~i~~-~N~i~agi~~L~~fH~~~~~~lHG  167 (308)
T PF07387_consen  105 YFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKI------------KINF-SNFITAGIKDLMDFHSENQHCLHG  167 (308)
T ss_pred             hhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCc------------ccch-hHHHHHhHHHHHHhhccCCCeecC
Confidence            456888888875  68887622  344567899998521            0001 1122222567888894  369999


Q ss_pred             CCCCCcEEEccCCcEEEeeeccc
Q 015948          136 DMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus       136 Dlkp~NILl~~~~~~kl~DFG~a  158 (397)
                      |-.|+||+-+..|.+||.|=+..
T Consensus       168 D~np~NiM~D~~G~lKlVDP~~L  190 (308)
T PF07387_consen  168 DCNPDNIMCDKFGYLKLVDPVCL  190 (308)
T ss_pred             CCChhheeecCCCCEEecChhhh
Confidence            99999999999999999997643

The function of this family is unknown.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=95.97  E-value=0.12  Score=48.74  Aligned_cols=69  Identities=20%  Similarity=0.192  Sum_probs=40.7

Q ss_pred             CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEe-----eeecCCeEEEEEEccccC
Q 015948           24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELID-----AFPHKGNLHLVFEFMETD   96 (397)
Q Consensus        24 ~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~-----~~~~~~~~~lv~e~~~g~   96 (397)
                      .-..||+... .++..|++|+.+...   .....+..|+..+..|....  ++....     ....++..+.|+++++|.
T Consensus        37 ~eN~vy~v~~-~~~~~~vlKv~r~~~---~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~  112 (325)
T PRK11768         37 YENRVYQFGD-EDGRRVVAKFYRPER---WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGR  112 (325)
T ss_pred             ccceEEEEec-CCCCEEEEEEcCccc---CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCC
Confidence            4467898853 346679999875332   12334557888887774211  222111     123356788899998873

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=95.20  E-value=0.017  Score=53.65  Aligned_cols=74  Identities=19%  Similarity=0.278  Sum_probs=43.8

Q ss_pred             EEEEEccccCHH---HH-HHhcCCCCCHHHHHHHHHHHHHHHHHhH------hCCccccCCCCCcEEEccCC--------
Q 015948           87 HLVFEFMETDLE---TV-IRNTNIFLSPADIKSYMQMTLKGLAFCH------KKWVLHRDMKPNNLLIGSHG--------  148 (397)
Q Consensus        87 ~lv~e~~~g~L~---~~-~~~~~~~l~~~~~~~~~~qil~aL~~lH------~~~ivHrDlkp~NILl~~~~--------  148 (397)
                      .+|+..+.++-.   .. ..+.+...-.+-++.++.||  ||-|+.      -.+.+|-||||+||||-+..        
T Consensus       247 IIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQi--aLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~  324 (434)
T PF05445_consen  247 IIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQI--ALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFG  324 (434)
T ss_pred             EEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHH--HHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEEC
Confidence            477887764321   11 12222222233456667776  455522      34699999999999995432        


Q ss_pred             ----------cEEEeeeccceeeC
Q 015948          149 ----------QLKLADFGLARIFG  162 (397)
Q Consensus       149 ----------~~kl~DFG~a~~~~  162 (397)
                                .++|.||.+++..+
T Consensus       325 ~~~~vF~Epi~~~LnDFDfSqv~~  348 (434)
T PF05445_consen  325 NRNYVFKEPIRCCLNDFDFSQVAN  348 (434)
T ss_pred             CeEEEecccceeeecccCHHHhcc
Confidence                      36788888877643

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.14  E-value=0.13  Score=45.24  Aligned_cols=70  Identities=16%  Similarity=0.133  Sum_probs=46.8

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEEEEEccc
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      +.+--|.--..|...+  ....|.+|+=     .......+..|+.-|+.|.   .-.+.+++.+..+.++.|+||||++
T Consensus        22 ~~v~gG~inea~~v~d--g~~~~FvK~n-----~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~   94 (286)
T COG3001          22 EEVSGGDINEAWRLRD--GTDPFFVKCN-----QREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLP   94 (286)
T ss_pred             cccCCccccceeEeec--CCcceEEEec-----chhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeecc
Confidence            3454455455555532  3357888872     2333345667887777774   3557788888899999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	397
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-105
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-78
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-78
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		4e-76
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		3e-75
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-75
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		5e-75
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-75
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-75
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		6e-75
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		6e-75
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-75
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		8e-75
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		9e-75
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-74
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-74
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-74
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-74
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-74
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-74
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-74
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-74
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-74
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-74
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-74
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-74
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-74
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-74
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-74
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-74
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-74
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		3e-74
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-74
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-74
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-74
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-74
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		4e-74
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		8e-74
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-73
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-73
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-73
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-72
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-71
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-67
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		5e-61
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		9e-61
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-60
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		4e-60
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		5e-60
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-59
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		6e-56
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		5e-52
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		9e-52
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-51
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-50
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-50
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-50
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-49
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-49
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-49
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		6e-49
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-48
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-48
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-48
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-48
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-48
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-48
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-48
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-48
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-48
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-48
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-48
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-48
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-48
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-48
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-48
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-48
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-48
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		3e-48
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		4e-48
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-48
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		5e-48
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		7e-48
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		8e-48
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		9e-48
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		5e-47
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-46
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-46
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-45
4exu_A	371	Mapk13, Inactive Form Length = 371		3e-45
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		4e-45
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		4e-45
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		1e-44
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-43
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-43
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-43
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-43
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-43
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-43
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-43
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-43
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-43
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		2e-43
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-43
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-43
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-43
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		5e-43
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		5e-43
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		6e-43
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		6e-43
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-43
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		6e-43
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-43
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		6e-43
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		6e-43
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-43
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		6e-43
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		7e-43
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		7e-43
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		7e-43
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		7e-43
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		7e-43
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		7e-43
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		7e-43
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		7e-43
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		7e-43
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		7e-43
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		7e-43
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		7e-43
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		8e-43
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		8e-43
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		8e-43
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		8e-43
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-43
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		8e-43
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		8e-43
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		8e-43
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		8e-43
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		8e-43
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		8e-43
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		9e-43
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		9e-43
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-43
3hec_A	348	P38 In Complex With Imatinib Length = 348		9e-43
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		9e-43
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		9e-43
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-42
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-42
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-42
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-42
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-42
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		3e-42
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		5e-42
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		5e-42
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		5e-42
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		5e-42
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		5e-42
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		5e-42
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		7e-42
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-42
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-42
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		9e-42
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		9e-42
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-41
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-41
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-41
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		1e-41
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-41
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-41
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-41
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-41
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-41
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-41
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-41
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-41
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-41
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		3e-41
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-41
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		3e-41
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-41
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		3e-41
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-40
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-39
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		3e-38
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		4e-38
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		8e-38
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		8e-38
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-37
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-37
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		1e-37
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		1e-37
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-37
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-37
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-37
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-37
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-37
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-37
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-37
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-37
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-37
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-36
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-36
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-36
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		1e-36
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-36
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-36
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		4e-36
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		4e-36
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		6e-36
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		8e-36
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		9e-36
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-35
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-35
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		1e-35
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-35
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		6e-35
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		6e-34
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		9e-33
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-31
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-31
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-31
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-31
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		2e-30
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-30
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		6e-30
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-29
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		1e-29
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		2e-29
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-29
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-29
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-29
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		2e-29
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		3e-29
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		3e-29
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		4e-29
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		4e-29
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		4e-29
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		4e-29
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		4e-29
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		4e-29
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		4e-29
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		4e-29
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		5e-29
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		5e-29
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		8e-29
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-28
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		6e-28
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		7e-28
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-28
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		9e-28
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		1e-27
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-27
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		1e-27
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-27
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		2e-27
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		2e-27
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		2e-27
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		2e-27
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		2e-27
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-27
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-27
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-27
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		5e-27
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-26
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		6e-26
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		6e-26
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		7e-26
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-25
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		5e-25
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		5e-25
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		5e-25
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		6e-25
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		8e-25
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-24
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-24
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-24
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-24
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		5e-24
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		5e-24
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		6e-24
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		7e-24
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		7e-24
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		3e-23
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-23
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-23
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-23
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-23
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		4e-23
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		4e-23
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-23
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		5e-23
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		5e-23
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		6e-23
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		8e-23
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		8e-23
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		9e-23
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		9e-23
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-22
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-22
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-22
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-22
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-22
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-22
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-22
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-22
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-22
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-22
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-22
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-22
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-22
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-22
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-22
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-22
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-22
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		3e-22
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-22
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-22
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-22
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-22
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-22
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-22
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		4e-22
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-22
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-22
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-22
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		5e-22
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		5e-22
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		5e-22
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		6e-22
3soa_A	444	Full-Length Human Camkii Length = 444		6e-22
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		6e-22
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		7e-22
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-21
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-21
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-21
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-21
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-21
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-21
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		5e-21
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		6e-21
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		6e-21
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		9e-21
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-20
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-20
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-20
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-20
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-20
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-20
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		3e-20
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-20
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-20
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-20
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		7e-20
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-19
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-19
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-19
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-19
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-19
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-19
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-19
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-19
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-19
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		3e-19
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-19
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		3e-19
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-19
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-19
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		5e-19
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		5e-19
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		5e-19
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		5e-19
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		6e-19
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		6e-19
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		7e-19
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-19
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		8e-19
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		9e-19
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-18
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-18
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-18
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-18
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-18
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-18
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-18
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-18
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-18
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-18
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-18
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-18
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		5e-18
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		7e-18
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		8e-18
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		9e-18
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		9e-18
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		9e-18
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-17
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-17
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-17
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-17
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		1e-17
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-17
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		1e-17
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-17
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-17
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-17
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-17
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-17
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-17
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		1e-17
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		1e-17
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-17
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-17
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-17
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-17
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-17
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-17
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-17
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-17
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-17
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-17
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-17
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-17
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-17
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		5e-17
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		5e-17
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-17
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		5e-17
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-17
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		6e-17
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		7e-17
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		7e-17
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		9e-17
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-16
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-16
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-16
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-16
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-16
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-16
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-16
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-16
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-16
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-16
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-16
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-16
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		3e-16
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-16
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		3e-16
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		4e-16
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		4e-16
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-16
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-16
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-16
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-16
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		5e-16
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		5e-16
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		5e-16
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		5e-16
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		6e-16
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		6e-16
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		6e-16
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		6e-16
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		7e-16
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		7e-16
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		7e-16
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		8e-16
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		9e-16
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		9e-16
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-15
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-15
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-15
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-15
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-15
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-15
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-15
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		1e-15
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-15
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-15
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-15
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		2e-15
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		3e-15
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-15
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		3e-15
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-15
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		3e-15
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		4e-15
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-15
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-15
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-15
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-15
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-15
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-15
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		5e-15
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		6e-15
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-15
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-15
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		6e-15
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		6e-15
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		6e-15
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-15
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		6e-15
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		6e-15
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		7e-15
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		7e-15
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		8e-15
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		9e-15
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		9e-15
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		9e-15
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		1e-14
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-14
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-14
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-14
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-14
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-14
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-14
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-14
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		1e-14
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-14
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-14
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-14
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-14
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-14
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-14
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-14
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-14
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-14
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-14
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-14
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-14
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-14
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		3e-14
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-14
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-14
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-14
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		4e-14
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-14
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-14
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		4e-14
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		5e-14
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		5e-14
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		5e-14
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		6e-14
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		6e-14
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		7e-14
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		7e-14
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		7e-14
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		7e-14
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		9e-14
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		9e-14
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-13
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-13
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-13
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-13
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-13
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-13
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-13
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		1e-13
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-13
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-13
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-13
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-13
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-13
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		1e-13
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-13
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		1e-13
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-13
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-13
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		2e-13
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-13
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-13
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-13
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-13
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-13
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-13
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-13
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-13
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-13
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-13
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-13
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-13
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-13
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-13
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-13
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-13
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-13
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-13
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-13
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-13
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-13
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-13
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-13
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-13
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-13
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-13
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-13
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-13
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-13
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-13
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-13
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-13
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-13
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-13
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-13
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-13
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-13
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		3e-13
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		3e-13
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-13
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-13
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-13
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-13
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-13
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-13
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-13
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		4e-13
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-13
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-13
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		4e-13
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-13
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-13
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		4e-13
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		4e-13
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-13
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-13
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		4e-13
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-13
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		4e-13
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		4e-13
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		4e-13
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-13
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		4e-13
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-13
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-13
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		4e-13
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		4e-13
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		5e-13
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		5e-13
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-13
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		5e-13
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		5e-13
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-13
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		5e-13
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		5e-13
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		5e-13
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		5e-13
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		5e-13
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		5e-13
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		5e-13
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-13
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		6e-13
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		6e-13
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		6e-13
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-13
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		6e-13
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		6e-13
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		6e-13
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		6e-13
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		6e-13
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		6e-13
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		6e-13
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		7e-13
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		7e-13
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		7e-13
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		7e-13
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		7e-13
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		7e-13
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		8e-13
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		8e-13
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		9e-13
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		9e-13
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-12
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-12
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		1e-12
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-12
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-12
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-12
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-12
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-12
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-12
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-12
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		1e-12
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-12
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-12
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-12
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-12
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-12
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-12
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-12
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		1e-12
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-12
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-12
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-12
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-12
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		1e-12
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-12
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-12
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-12
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-12
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-12
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-12
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-12
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-12
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-12
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-12
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-12
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-12
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-12
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-12
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-12
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		2e-12
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-12
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-12
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-12
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-12
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-12
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		3e-12
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		3e-12
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-12
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		3e-12
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		3e-12
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		3e-12
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-12
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		3e-12
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-12
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		3e-12
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-12
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		3e-12
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-12
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-12
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-12
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-12
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-12
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		3e-12
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-12
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		4e-12
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		4e-12
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		4e-12
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		5e-12
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-12
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		5e-12
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		5e-12
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		5e-12
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		6e-12
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		6e-12
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		6e-12
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-12
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		8e-12
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		8e-12
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		8e-12
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		8e-12
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		8e-12
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		9e-12
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		9e-12
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-11
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-11
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-11
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		1e-11
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-11
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-11
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-11
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-11
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-11
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-11
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-11
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		1e-11
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		1e-11
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-11
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-11
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-11
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-11
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		1e-11
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-11
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-11
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-11
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		1e-11
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-11
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-11
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-11
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-11
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-11
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-11
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-11
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-11
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		2e-11
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		2e-11
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-11
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-11
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-11
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		2e-11
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-11
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		2e-11
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		2e-11
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		2e-11
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		2e-11
2oza_A	356	Structure Of P38alpha Complex Length = 356		2e-11
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-11
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-11
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-11
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-11
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-11
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-11
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-11
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-11
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-11
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-11
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		2e-11
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		2e-11
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-11
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-11
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-11
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-11
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		3e-11
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-11
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-11
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-11
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-11
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-11
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-11
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-11
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-11
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-11
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		3e-11
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		3e-11
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		3e-11
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		4e-11
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-11
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		5e-11
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		5e-11
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		6e-11
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		7e-11
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-11
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		7e-11
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		7e-11
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		8e-11
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		8e-11
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		8e-11
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		8e-11
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		8e-11
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-11
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		8e-11
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		9e-11
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		9e-11
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		9e-11
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-11
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-10
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-10
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-10
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-10
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-10
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		1e-10
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		1e-10
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-10
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-10
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-10
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-10
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-10
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-10
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		1e-10
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-10
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-10
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-10
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-10
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		1e-10
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-10
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		2e-10
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		2e-10
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-10
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-10
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-10
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-10
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		2e-10
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-10
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-10
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		3e-10
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-10
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		3e-10
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-10
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-10
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		3e-10
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-10
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-10
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		3e-10
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-10
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		4e-10
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		4e-10
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		4e-10
3b2t_A	311	Structure Of Phosphotransferase Length = 311		4e-10
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		4e-10
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		4e-10
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		4e-10
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-10
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-10
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-10
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		4e-10
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-10
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		5e-10
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-10
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-10
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-10
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		6e-10
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-10
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		6e-10
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		7e-10
2pl0_A	289	Lck Bound To Imatinib Length = 289		7e-10
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		8e-10
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-10
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		8e-10
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-10
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		9e-10
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-10
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		9e-10
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		9e-10
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		9e-10
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		9e-10
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-09
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-09
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-09
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-09
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-09
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-09
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-09
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-09
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-09
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-09
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-09
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-09
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-09
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-09
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-09
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-09
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-09
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-09
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-09
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-09
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-09
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-09
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		2e-09
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-09
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-09
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-09
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-09
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-09
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-09
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-09
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-09
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		3e-09
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-09
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-09
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-09
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		3e-09
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-09
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		3e-09
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-09
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		4e-09
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		4e-09
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-09
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		4e-09
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-09
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		4e-09
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		4e-09
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		4e-09
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		4e-09
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-09
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		4e-09
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		4e-09
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		5e-09
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		5e-09
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		5e-09
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-09
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		6e-09
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		6e-09
3a4o_X	286	Lyn Kinase Domain Length = 286		7e-09
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		8e-09
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		1e-08
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-08
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-08
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-08
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-08
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-08
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		2e-08
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-08
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		2e-08
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-08
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		2e-08
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-08
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-08
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		3e-08
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-08
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		4e-08
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		4e-08
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-08
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		4e-08
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		4e-08
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		4e-08
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		4e-08
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		4e-08
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-08
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		5e-08
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-08

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  377 bits (969), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/318 (56%), Positives = 228/318 (71%), Gaps = 3/318 (0%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKL 64
           K  A RY K + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALREIKL
Sbjct: 6   KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65
Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L+EL  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL
Sbjct: 66  LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
            + H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R + HQV  RWYRAPELLF
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           GA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+  LPD
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304
           YV ++     PL  +F +A DD LDL+  +F ++P ARITA QAL+ +YFS+ P PT   
Sbjct: 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 305
Query: 305 KLPRPATKRASKASDFNP 322
           +LPRP     +     NP
Sbjct: 306 QLPRPNCPVETLKEQSNP 323

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score =  288 bits (737), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 140/287 (48%), Positives = 189/287 (65%), Gaps = 3/287 (1%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + ++Y K E +GEGTYGVVYKA D++ G+ VA+K+IRL  + EG+  TA+REI LLKEL 
Sbjct: 19  LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
            P+I+ LID    +  L LVFEFME DL+ V+      L  + IK Y+   L+G+A CH+
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             +LHRD+KP NLLI S G LKLADFGLAR FG P R +TH+V   WYRAP++L G+K+Y
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-- 247
              VD+W+ GCIFAE++  +P   G +D DQL KIF+  GT  P +WP +  LP + +  
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT 257
Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           +Q     P  S+ P    + +DLLS M  +DP  RI+A+ A+ H YF
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score =  288 bits (737), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 140/287 (48%), Positives = 189/287 (65%), Gaps = 3/287 (1%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + ++Y K E +GEGTYGVVYKA D++ G+ VA+K+IRL  + EG+  TA+REI LLKEL 
Sbjct: 19  LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
            P+I+ LID    +  L LVFEFME DL+ V+      L  + IK Y+   L+G+A CH+
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             +LHRD+KP NLLI S G LKLADFGLAR FG P R +TH+V   WYRAP++L G+K+Y
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-- 247
              VD+W+ GCIFAE++  +P   G +D DQL KIF+  GT  P +WP +  LP + +  
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT 257
Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           +Q     P  S+ P    + +DLLS M  +DP  RI+A+ A+ H YF
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  281 bits (719), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 144/300 (48%), Positives = 187/300 (62%), Gaps = 2/300 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P    +L RP
Sbjct: 247 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRLERP 306

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  278 bits (712), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 142/297 (47%), Positives = 185/297 (62%), Gaps = 2/297 (0%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           S +  + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLK
Sbjct: 5   SPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLA 125
           EL  P+I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLA
Sbjct: 65  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
           FCH   VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
            K Y   VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 246 V-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
              +   A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  278 bits (710), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+T +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  278 bits (710), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 142/297 (47%), Positives = 185/297 (62%), Gaps = 2/297 (0%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           S +  + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLK
Sbjct: 5   SPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLA 125
           EL  P+I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLA
Sbjct: 65  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
           FCH   VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
            K Y   VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 246 V-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
              +   A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  277 bits (709), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  277 bits (709), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  277 bits (709), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  277 bits (709), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  277 bits (708), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  277 bits (708), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 141/292 (48%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFE +  DL+T +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  276 bits (707), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 183/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GL+FCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 5   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 65  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 66  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 5   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 65  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 5   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 65  NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+ KIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+ KIRL  + EGV  TA+REI LLKEL  P
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 247 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  275 bits (704), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 5   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 65  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  275 bits (704), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  275 bits (704), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  275 bits (704), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  275 bits (703), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  275 bits (703), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  275 bits (702), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 139/285 (48%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score =  273 bits (699), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 136/284 (47%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y   E +GEGTYGVVYKA     G+T A+KKIRL K+ EG+  T +REI +LKELK  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I++L D    K  L LVFE ++ DL+ ++      L     KS++   L G+A+CH + 
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LK+ADFGLAR FG P R++TH+V   WYRAP++L G+K+Y  
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            +D+W+ GCIFAE++N  P   G S+ DQL +IF   GT     WP++  LP Y     V
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 252 AAP-PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             P P  S      +  +DLLSKM   DP  RITA+QALEH YF
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 136/284 (47%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y   E +GEGTYGVVYKA     G+T A+KKIRL K+ EG+  T +REI +LKELK  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I++L D    K  L LVFE ++ DL+ ++      L     KS++   L G+A+CH + 
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LK+ADFGLAR FG P R++TH+V   WYRAP++L G+K+Y  
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            +D+W+ GCIFAE++N  P   G S+ DQL +IF   GT     WP++  LP Y     V
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 252 AAP-PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             P P  S      +  +DLLSKM   DP  RITA+QALEH YF
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 135/284 (47%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y   E +GEGTYGVVYKA     G+T A+KKIRL K+ EG+  T +REI +LKELK  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I++L D    K  L LVFE ++ DL+ ++      L     KS++   L G+A+CH + 
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LK+ADFGLAR FG P R++TH++   WYRAP++L G+K+Y  
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            +D+W+ GCIFAE++N  P   G S+ DQL +IF   GT     WP++  LP Y     V
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 252 AAP-PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             P P  S      +  +DLLSKM   DP  RITA+QALEH YF
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  273 bits (697), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 139/292 (47%), Positives = 182/292 (62%), Gaps = 2/292 (0%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 6   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFE ++ DL+  +  + +   P   IKSY+   L+GLAFCH  
Sbjct: 66  NIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R + H+V   WYRAPE+L G K Y 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P 
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score =  269 bits (687), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/285 (48%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y K E +GEGTYG V+KA + +T + VA+K++RL    EGV  +ALREI LLKELK  +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 73  IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I+ L D       L LVFEF + DL+    + N  L P  +KS++   LKGL FCH + V
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           LHRD+KP NLLI  +G+LKLADFGLAR FG P R ++ +V   WYR P++LFGAK Y   
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-QY 250
           +D+W+AGCIFAEL N  RP   G+   DQL +IF   GT T  QWP +  LPDY  Y  Y
Sbjct: 183 IDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242
Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            A   L ++ P  +    DLL  +   +P  RI+A++AL+H YFS
Sbjct: 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score =  266 bits (681), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 138/285 (48%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y K E +GEGTYG V+KA + +T + VA+K++RL    EGV  +ALREI LLKELK  +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 73  IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I+ L D       L LVFEF + DL+    + N  L P  +KS++   LKGL FCH + V
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           LHRD+KP NLLI  +G+LKLA+FGLAR FG P R ++ +V   WYR P++LFGAK Y   
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 193 VDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-QY 250
           +D+W+AGCIFAEL N  RP   G+   DQL +IF   GT T  QWP +  LPDY  Y  Y
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242
Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            A   L ++ P  +    DLL  +   +P  RI+A++AL+H YFS
Sbjct: 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score =  251 bits (642), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 136/291 (46%), Positives = 181/291 (62%), Gaps = 8/291 (2%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           DRY +   LGEGTYG VYKAIDT T +TVAIK+IRL  ++EGV  TA+RE+ LLKEL+  
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +IIEL     H   LHL+FE+ E DL+  + + N  +S   IKS++   + G+ FCH + 
Sbjct: 94  NIIELKSVIHHNHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 132 VLHRDMKPNNLLIGSHGQ-----LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
            LHRD+KP NLL+          LK+ DFGLAR FG P R+FTH++   WYR PE+L G+
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           + Y   VD+W+  CI+AE+L + P   G S+IDQL KIF   G    + WP +  LPD+ 
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272
Query: 247 EY--QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
           +   ++      R L     D+ LDLL+ M   DP  RI+A+ ALEH YFS
Sbjct: 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score =  231 bits (589), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 126/308 (40%), Positives = 182/308 (59%), Gaps = 16/308 (5%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
             +Y K   +G+GT+G V+KA   KTGQ VA+KK+ +  +KEG   TALREIK+L+ LK 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 71  PHIIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
            +++ LI+     A P+   KG+++LVF+F E DL  ++ N  +  + ++IK  MQM L 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYR 178
           GL + H+  +LHRDMK  N+LI   G LKLADFGLAR F     S   R+ ++V   WYR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
            PELL G + YG  +D+W AGCI AE+  R P +QG+++  QL  I    G+ TP  WP+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 239 LAYLPDYVEYQYVAAP--PLRSLFPSASDD--ALDLLSKMFTYDPKARITAQQALEHRYF 294
           +     Y + + V      ++    +   D  ALDL+ K+   DP  RI +  AL H +F
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
Query: 295 SSAPLPTE 302
            S P+P++
Sbjct: 317 WSDPMPSD 324

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score =  230 bits (587), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 126/306 (41%), Positives = 182/306 (59%), Gaps = 16/306 (5%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y K   +G+GT+G V+KA   KTGQ VA+KK+ +  +KEG   TALREIK+L+ LK  +
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 73  IIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           ++ LI+     A P+   KG+++LVF+F E DL  ++ N  +  + ++IK  MQM L GL
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYRAP 180
            + H+  +LHRDMK  N+LI   G LKLADFGLAR F     S   R+ ++V   WYR P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELL G + YG  +D+W AGCI AE+  R P +QG+++  QL  I    G+ TP  WP++ 
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 241 YLPDYVEYQYVAAP--PLRSLFPSASDD--ALDLLSKMFTYDPKARITAQQALEHRYFSS 296
               Y + + V      ++    +   D  ALDL+ K+   DP  RI +  AL H +F S
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
Query: 297 APLPTE 302
            P+P++
Sbjct: 319 DPMPSD 324

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score =  230 bits (586), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 126/306 (41%), Positives = 182/306 (59%), Gaps = 16/306 (5%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y K   +G+GT+G V+KA   KTGQ VA+KK+ +  +KEG   TALREIK+L+ LK  +
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 73  IIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           ++ LI+     A P+   KG+++LVF+F E DL  ++ N  +  + ++IK  MQM L GL
Sbjct: 78  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYRAP 180
            + H+  +LHRDMK  N+LI   G LKLADFGLAR F     S   R+ ++V   WYR P
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELL G + YG  +D+W AGCI AE+  R P +QG+++  QL  I    G+ TP  WP++ 
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 241 YLPDYVEYQYVAAP--PLRSLFPSASDD--ALDLLSKMFTYDPKARITAQQALEHRYFSS 296
               Y + + V      ++    +   D  ALDL+ K+   DP  RI +  AL H +F S
Sbjct: 258 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317
Query: 297 APLPTE 302
            P+P++
Sbjct: 318 DPMPSD 323

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score =  228 bits (582), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/306 (40%), Positives = 181/306 (59%), Gaps = 16/306 (5%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           +Y K   +G+GT+G V+KA   KTGQ VA+KK+ +  +KEG   TALREIK+L+ LK  +
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 73  IIELID-----AFPH---KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           ++ LI+     A P+   K +++LVF+F E DL  ++ N  +  + ++IK  MQM L GL
Sbjct: 79  VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYRAP 180
            + H+  +LHRDMK  N+LI   G LKLADFGLAR F     S   R+ ++V   WYR P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELL G + YG  +D+W AGCI AE+  R P +QG+++  QL  I    G+ TP  WP++ 
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 241 YLPDYVEYQYVAAP--PLRSLFPSASDD--ALDLLSKMFTYDPKARITAQQALEHRYFSS 296
               Y + + V      ++    +   D  ALDL+ K+   DP  RI +  AL H +F S
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 318
Query: 297 APLPTE 302
            P+P++
Sbjct: 319 DPMPSD 324

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  228 bits (581), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 119/297 (40%), Positives = 173/297 (58%), Gaps = 14/297 (4%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           + ++ + E LG GTY  VYK ++  TG  VA+K+++L  + EG   TA+REI L+KELK 
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKH 62
Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-----IKSYMQMTLKGLA 125
            +I+ L D    +  L LVFEFM+ DL+  + +  +  +P       +K +    L+GLA
Sbjct: 63  ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
           FCH+  +LHRD+KP NLLI   GQLKL DFGLAR FG P   F+ +V   WYRAP++L G
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
           ++ Y   +D+W+ GCI AE++  +P   G++D +QL  IF   GT   S WP +  LP Y
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242
Query: 246 VEYQYVAAPP--LRSLFPSASDDAL-----DLLSKMFTYDPKARITAQQALEHRYFS 295
                   PP  LR +    + + L     D L  +   +P  R++A+QAL H +F+
Sbjct: 243 -NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 180/307 (58%), Gaps = 5/307 (1%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + Y+K + LGEGTY  VYK     T   VA+K+IRL + +EG   TA+RE+ LLK+LK  
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHA 60
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I+ L D    + +L LVFE+++ DL+  + +    ++  ++K ++   L+GLA+CH++ 
Sbjct: 61  NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LKLADFGLAR    P + + ++V   WYR P++L G+  Y  
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY- 250
            +D+W  GCIF E+   RP   GS+  +QL  IF   GT T   WP +    ++  Y Y 
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP 240
Query: 251 -VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
              A  L S  P    D  DLL+K+  ++ + RI+A+ A++H +F S  L    +KLP  
Sbjct: 241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS--LGERIHKLPDT 298
Query: 310 ATKRASK 316
            +  A K
Sbjct: 299 TSIFALK 305

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  214 bits (545), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/298 (40%), Positives = 166/298 (55%), Gaps = 19/298 (6%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + ++Y K   +GEG+YGVV+K  +  TGQ VAIKK    +    +   ALREI++LK+LK
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF---LSPADIKSYMQMTLKGLAF 126
            P+++ L++ F  K  LHLVFE+ +    TV+   + +   +    +KS    TL+ + F
Sbjct: 61  HPNLVNLLEVFRRKRRLHLVFEYCD---HTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
           CHK   +HRD+KP N+LI  H  +KL DFG AR+   P   +  +V  RWYR+PELL G 
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP--------SQWPD 238
            QYG  VDVWA GC+FAELL+  P   G SD+DQL  I    G   P        +Q+  
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
              +PD  + +     PL   FP+ S  AL LL      DP  R+T +Q L H YF +
Sbjct: 238 GVKIPDPEDME-----PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  201 bits (512), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/285 (40%), Positives = 161/285 (56%), Gaps = 13/285 (4%)
Query: 20  LGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIE 75
           +GEG YG V+KA D K G + VA+K++R+   +EG+  + +RE+ +L+ L++   P+++ 
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 76  LIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHK 129
           L D         +  L LVFE ++ DL T +        P + IK  M   L+GL F H 
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+KP N+L+ S GQ+KLADFGLARI+ S     T  V   WYRAPE+L  +  Y
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAPEVLLQSS-Y 196
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              VD+W+ GCIFAE+  R+P  +GSSD+DQLGKI    G      WP    LP    + 
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-FH 255
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             +A P+        +   DLL K  T++P  RI+A  AL H YF
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  201 bits (510), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 115/285 (40%), Positives = 161/285 (56%), Gaps = 13/285 (4%)
Query: 20  LGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIE 75
           +GEG YG V+KA D K G + VA+K++R+   +EG+  + +RE+ +L+ L++   P+++ 
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 76  LIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHK 129
           L D         +  L LVFE ++ DL T +        P + IK  M   L+GL F H 
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+KP N+L+ S GQ+KLADFGLARI+ S     T  V   WYRAPE+L  +  Y
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAPEVLLQSS-Y 196
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              VD+W+ GCIFAE+  R+P  +GSSD+DQLGKI    G      WP    LP    + 
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-FH 255
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             +A P+        +   DLL K  T++P  RI+A  AL H YF
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/285 (40%), Positives = 161/285 (56%), Gaps = 13/285 (4%)
Query: 20  LGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIE 75
           +GEG YG V+KA D K G + VA+K++R+   +EG+  + +RE+ +L+ L++   P+++ 
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 76  LIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHK 129
           L D         +  L LVFE ++ DL T +        P + IK  M   L+GL F H 
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+KP N+L+ S GQ+KLADFGLARI+ S     T  V   WYRAPE+L  +  Y
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAPEVLLQSS-Y 196
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              VD+W+ GCIFAE+  R+P  +GSSD+DQLGKI    G      WP    LP    + 
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-FH 255
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             +A P+        +   DLL K  T++P  RI+A  AL H YF
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/291 (38%), Positives = 163/291 (56%), Gaps = 12/291 (4%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-- 70
           RY     +G G YG VYKA D  +G  VA+K +R+   +EG+  + +RE+ LL+ L++  
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 71  -PHIIELIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKG 123
            P+++ L+D         +  + LVFE ++ DL T +        PA+ IK  M+  L+G
Sbjct: 65  HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           L F H   ++HRD+KP N+L+ S G +KLADFGLARI+ S        V   WYRAPE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALAPVVVTLWYRAPEVL 183
Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  Y   VD+W+ GCIFAE+  R+P   G+S+ DQLGKIF   G      WP    LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               +      P++S+ P   +    LL +M T++P  RI+A +AL+H Y 
Sbjct: 243 RGA-FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/291 (38%), Positives = 163/291 (56%), Gaps = 12/291 (4%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-- 70
           RY     +G G YG VYKA D  +G  VA+K +R+   +EG+  + +RE+ LL+ L++  
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 71  -PHIIELIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKG 123
            P+++ L+D         +  + LVFE ++ DL T +        PA+ IK  M+  L+G
Sbjct: 65  HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           L F H   ++HRD+KP N+L+ S G +KLADFGLARI+ S        V   WYRAPE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALDPVVVTLWYRAPEVL 183
Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  Y   VD+W+ GCIFAE+  R+P   G+S+ DQLGKIF   G      WP    LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               +      P++S+ P   +    LL +M T++P  RI+A +AL+H Y 
Sbjct: 243 RGA-FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/291 (38%), Positives = 163/291 (56%), Gaps = 12/291 (4%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-- 70
           RY     +G G YG VYKA D  +G  VA+K +R+   +EG+  + +RE+ LL+ L++  
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 71  -PHIIELIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTLKG 123
            P+++ L+D         +  + LVFE ++ DL T +        PA+ IK  M+  L+G
Sbjct: 65  HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           L F H   ++HRD+KP N+L+ S G +KLADFGLARI+      F   V   WYRAPE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP-VVVTLWYRAPEVL 183
Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  Y   VD+W+ GCIFAE+  R+P   G+S+ DQLGKIF   G      WP    LP
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               +      P++S+ P   +    LL +M T++P  RI+A +AL+H Y 
Sbjct: 243 RGA-FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score =  193 bits (491), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 165/324 (50%), Gaps = 27/324 (8%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           ++  +  + +LGEG YGVV  A    TG+ VAIKKI     K       LREIK+LK  K
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFK 67
Query: 70  SPHIIELI-----DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II +      D+F +   ++++ E M+TDL  VI      LS   I+ ++  TL+ +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAV 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP----------DRRFTHQVFA 174
              H   V+HRD+KP+NLLI S+  LK+ DFGLARI                  T  V  
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           RWYRAPE++  + +Y   +DVW+ GCI AEL  RRP   G     QL  IF   G  TP 
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG--TPH 243
Query: 235 QWPDLAYLPDYVEYQYVA------APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
              DL  +      +Y+       A PL  +FP  +   +DLL +M  +DP  RITA++A
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 289 LEHRYFSSAPLPT-EPNKLPRPAT 311
           LEH Y  +   P  EP   P P +
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPS 327

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score =  193 bits (491), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y    ++GEG+YG+V K  +  TG+ VAIKK       + V   A+REIKLLK+L+  
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCH 128
           +++ L++    K   +LVFEF++    T++ +  +F +  D   ++ Y+   + G+ FCH
Sbjct: 85  NLVNLLEVCKKKKRWYLVFEFVD---HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
              ++HRD+KP N+L+   G +KL DFG AR   +P   +  +V  RWYRAPELL G  +
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP------SQWPDLA-- 240
           YG  VDVWA GC+  E+    P   G SDIDQL  I    G   P      ++ P  A  
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            LP+  E +     PL   +P  S+  +DL  K    DP  R    + L H +F 
Sbjct: 262 RLPEIKERE-----PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score =  193 bits (490), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 165/324 (50%), Gaps = 27/324 (8%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           ++  +  + +LGEG YGVV  A    TG+ VAIKKI     K       LREIK+LK  K
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFK 67
Query: 70  SPHIIELI-----DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II +      D+F +   ++++ E M+TDL  VI      LS   I+ ++  TL+ +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAV 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP----------DRRFTHQVFA 174
              H   V+HRD+KP+NLLI S+  LK+ DFGLARI                  T  V  
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           RWYRAPE++  + +Y   +DVW+ GCI AEL  RRP   G     QL  IF   G  TP 
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG--TPH 243
Query: 235 QWPDLAYLPDYVEYQYVA------APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
              DL  +      +Y+       A PL  +FP  +   +DLL +M  +DP  RITA++A
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 289 LEHRYFSSAPLPT-EPNKLPRPAT 311
           LEH Y  +   P  EP   P P +
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPS 327

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score =  191 bits (485), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/324 (37%), Positives = 168/324 (51%), Gaps = 27/324 (8%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           ++  +  + +LGEG YGVV  A    TG+ VAIKKI     K       LREIK+LK  K
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFK 67
Query: 70  SPHIIELI-----DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II +      D+F +   ++++ E M+TDL  VI      LS   I+ ++  TL+ +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAV 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---GSPDRRFTHQ-------VFA 174
              H   V+HRD+KP+NLLI S+  LK+ DFGLARI     + +   T Q       V  
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           RWYRAPE++  + +Y   +DVW+ GCI AEL  RRP   G     QL  IF   G  TP 
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG--TPH 243
Query: 235 QWPDLAYLPDYVEYQYVA------APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
              DL  +      +Y+       A PL  +FP  +   +DLL +M  +DP  RITA++A
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 289 LEHRYFSSAPLPT-EPNKLPRPAT 311
           LEH Y  +   P  EP   P P +
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPS 327

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 165/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 23  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFR 81
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 82  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 139
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 255
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 256 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Query: 295 SSAPLPTE 302
           +    P++
Sbjct: 316 AQYYDPSD 323

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 21  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 254 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
                P++
Sbjct: 314 EQYYDPSD 321

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 23  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 81
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 82  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 139
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 255
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 256 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Query: 295 SSAPLPTE 302
                P++
Sbjct: 316 EQYYDPSD 323

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 26  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 84
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 85  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 142
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 201
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 258
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 259 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
Query: 295 SSAPLPTE 302
                P++
Sbjct: 319 EQYYDPSD 326

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 27  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 85
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 86  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 143
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 144 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 202
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 259
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 260 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
Query: 295 SSAPLPTE 302
                P++
Sbjct: 320 EQYYDPSD 327

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 18  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 76
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 77  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 134
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 135 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 193
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 250
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 251 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
Query: 295 SSAPLPTE 302
                P++
Sbjct: 311 EQYYDPSD 318

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
                P++
Sbjct: 318 EQYYDPSD 325

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 29  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 87
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 88  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 145
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 146 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 204
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 261
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 262 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
Query: 295 SSAPLPTE 302
                P++
Sbjct: 322 EQYYDPSD 329

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 21  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 254 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
                P++
Sbjct: 314 EQYYDPSD 321

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 21  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 254 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
                P++
Sbjct: 314 EQYYDPSD 321

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 41  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 99
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 157
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 216
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 273
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 274 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
Query: 295 SSAPLPTE 302
                P++
Sbjct: 334 EQYYDPSD 341

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 19  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 77
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 78  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 194
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 251
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 252 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Query: 295 SSAPLPTE 302
                P++
Sbjct: 312 EQYYDPSD 319

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 21  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 254 XIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
                P++
Sbjct: 314 EQYYDPSD 321

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
                P++
Sbjct: 318 EQYYDPSD 325

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
                P++
Sbjct: 318 EQYYDPSD 325

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD   T      V  RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
                P++
Sbjct: 318 EQYYDPSD 325

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 26  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 84
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 85  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 142
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD   T      V  RWYRAP
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAP 201
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 258
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 259 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
Query: 295 SSAPLPTE 302
                P++
Sbjct: 319 EQYYDPSD 326

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 21  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 79
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 196
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 253
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 254 XIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
Query: 295 SSAPLPTE 302
                P++
Sbjct: 314 EQYYDPSD 321

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score =  188 bits (478), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAI+KI   + +     T LREIK+L   +
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT-LREIKILLRFR 83
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
                P++
Sbjct: 318 EQYYDPSD 325

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score =  188 bits (478), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT-LREIKILLRFR 83
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 141
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 257
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 295 SSAPLPTE 302
                P++
Sbjct: 318 EQYYDPSD 325

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/301 (37%), Positives = 164/301 (54%), Gaps = 15/301 (4%)
Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL---GKQKEGVNFTALREI 62
           L      RY     +G G YG VYKA D  +G  VA+K +R+   G    G+  + +RE+
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 63  KLLKELKS---PHIIELIDAFP-----HKGNLHLVFEFMETDLETVIRNTNIFLSPAD-I 113
            LL+ L++   P+++ L+D         +  + LVFE ++ DL T +        PA+ I
Sbjct: 63  ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173
           K  M+  L+GL F H   ++HRD+KP N+L+ S G +KLADFGLARI+ S     T  V 
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALTPVVV 181
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
             WYRAPE+L  +  Y   VD+W+ GCIFAE+  R+P   G+S+ DQLGKIF   G    
Sbjct: 182 TLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
             WP    LP    +      P++S+ P   +    LL +M T++P  RI+A +AL+H Y
Sbjct: 241 DDWPRDVSLPRGA-FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299
Query: 294 F 294
Sbjct: 300 L 300

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score =  187 bits (476), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 163/308 (52%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 19  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 77
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 78  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 194
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +P Q  DL 
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPEQ-EDLN 251
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 252 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
Query: 295 SSAPLPTE 302
                P++
Sbjct: 312 EQYYDPSD 319

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  187 bits (475), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 23  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFR 81
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           ++++V + METDL  +++  +  LS   I  ++   L+GL
Sbjct: 82  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGL 139
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 198
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 255
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
              +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 256 CGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Query: 295 SSAPLPTE 302
           +    P++
Sbjct: 316 AQYYDPSD 323

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score =  187 bits (475), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 171/320 (53%), Gaps = 26/320 (8%)
Query: 2   AEVDLSK----KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT 57
            EV++ K     V  RY + + +GEG YG+V  A D      VAIKKI   + +     T
Sbjct: 29  GEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT 88
Query: 58  ALREIKLLKELKSPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD 112
            LREI++L   +  ++I + D           ++++V + METDL  ++++    LS   
Sbjct: 89  -LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ--LSNDH 145
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----F 168
           I  ++   L+GL + H   VLHRD+KP+NLLI +   LK+ DFGLARI   P+       
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARI-ADPEHDHTGFL 204
Query: 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228
           T  V  RWYRAPE++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    
Sbjct: 205 TEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKAR 282
           G  +PSQ  DL  + +     Y+ + P ++      LFP +   ALDLL +M T++P  R
Sbjct: 265 G--SPSQ-EDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKR 321
Query: 283 ITAQQALEHRYFSSAPLPTE 302
           IT ++AL H Y      PT+
Sbjct: 322 ITVEEALAHPYLEQYYDPTD 341

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score =  185 bits (469), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 161/308 (52%), Gaps = 22/308 (7%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +     T LREIK+L   +
Sbjct: 41  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFR 99
Query: 70  SPHIIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           +++LV   M  DL  +++  +  LS   I  ++   L+GL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGL 157
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----FTHQVFARWYRAP 180
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+   PD       T  V  RWYRAP
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 216
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PSQ  DL 
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPSQ-EDLN 273
Query: 241 YLPDYVEYQYVAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            + +     Y+ + P ++      LFP+A   ALDLL KM T++P  RI  +QAL H Y 
Sbjct: 274 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
Query: 295 SSAPLPTE 302
                P++
Sbjct: 334 EQYYDPSD 341

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 167/320 (52%), Gaps = 21/320 (6%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D++  V D Y   E +G G YGVV  A    TGQ VAIKKI             LRE+K+
Sbjct: 48  DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 107
Query: 65  LKELKSPHIIELIDA------FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LK  K  +II + D       +    ++++V + ME+DL  +I ++   L+   ++ ++ 
Sbjct: 108 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP-LTLEHVRYFLY 166
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRR---FTHQVFA 174
             L+GL + H   V+HRD+KP+NLL+  + +LK+ DFG+AR +  SP       T  V  
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           RWYRAPEL+    +Y   +D+W+ GCIF E+L RR    G + + QL  I    GT +P+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 286
Query: 235 QWPDL------AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
               +      AY+      Q V   P  +++P A   AL LL +M  ++P ARI+A  A
Sbjct: 287 VIQAVGAERVRAYIQSLPPRQPV---PWETVYPGADRQALSLLGRMLRFEPSARISAAAA 343
Query: 289 LEHRYFSSAPLP-TEPNKLP 307
           L H + +    P  EP+  P
Sbjct: 344 LRHPFLAKYHDPDDEPDCAP 363

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score =  182 bits (461), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 167/320 (52%), Gaps = 21/320 (6%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D++  V D Y   E +G G YGVV  A    TGQ VAIKKI             LRE+K+
Sbjct: 47  DVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 106
Query: 65  LKELKSPHIIELIDA------FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LK  K  +II + D       +    ++++V + ME+DL  +I ++   L+   ++ ++ 
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP-LTLEHVRYFLY 165
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRR---FTHQVFA 174
             L+GL + H   V+HRD+KP+NLL+  + +LK+ DFG+AR +  SP       T  V  
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           RWYRAPEL+    +Y   +D+W+ GCIF E+L RR    G + + QL  I    GT +P+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285
Query: 235 QWPDL------AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
               +      AY+      Q V   P  +++P A   AL LL +M  ++P ARI+A  A
Sbjct: 286 VIQAVGAERVRAYIQSLPPRQPV---PWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342
Query: 289 LEHRYFSSAPLP-TEPNKLP 307
           L H + +    P  EP+  P
Sbjct: 343 LRHPFLAKYHDPDDEPDCAP 362

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score =  179 bits (453), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 152/302 (50%), Gaps = 21/302 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G YG V  AID ++G+ VAIKK+    Q E     A RE+ LLK ++  ++I L+D 
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 80  FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           F    +L      +LV  FM+TDL+ ++    +  S   I+  +   LKGL + H   V+
Sbjct: 92  FTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+KP NL +    +LK+ DFGLAR     D   T  V  RWYRAPE++     Y   V
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ GCI AE+L  +   +G   +DQL +I    G         +  L D     Y+ +
Sbjct: 206 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQS 262
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
            P         LFP AS  A DLL KM   D   R+TA QAL H +F     P E  +  
Sbjct: 263 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 322
Query: 308 RP 309
           +P
Sbjct: 323 QP 324

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score =  179 bits (453), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 152/302 (50%), Gaps = 21/302 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G YG V  AID ++G+ VAIKK+    Q E     A RE+ LLK ++  ++I L+D 
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 80  FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           F    +L      +LV  FM+TDL+ ++    +  S   I+  +   LKGL + H   V+
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+KP NL +    +LK+ DFGLAR     D   T  V  RWYRAPE++     Y   V
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ GCI AE+L  +   +G   +DQL +I    G         +  L D     Y+ +
Sbjct: 224 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQS 280
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
            P         LFP AS  A DLL KM   D   R+TA QAL H +F     P E  +  
Sbjct: 281 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 340
Query: 308 RP 309
           +P
Sbjct: 341 QP 342

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 162/309 (52%), Gaps = 36/309 (11%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--VNFTA--------LREIK 63
           Y  +  +  G+YG V   +D++ G  VAIK++      +G  VN  +        LREI+
Sbjct: 24  YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRV-FNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 64  LLKELKSPHIIELIDAFPH-----KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LL     P+I+ L D F H        L+LV E M TDL  VI +  I +SP  I+ +M 
Sbjct: 82  LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L GL   H+  V+HRD+ P N+L+  +  + + DF LAR   + D   TH V  RWYR
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE-DTADANKTHYVTHRWYR 200
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT-------- 230
           APEL+   K +   VD+W+AGC+ AE+ NR+   +GS+  +QL KI    GT        
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260
Query: 231 -ATPSQWPDLAYLPDYV--EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
            ++PS         DY+      V A    ++ P+A   ALDL++KM  ++P+ RI+ +Q
Sbjct: 261 FSSPSA-------RDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ 313
Query: 288 ALEHRYFSS 296
           AL H YF S
Sbjct: 314 ALRHPYFES 322

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 162/309 (52%), Gaps = 36/309 (11%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--VNFTA--------LREIK 63
           Y  +  +  G+YG V   +D++ G  VAIK++      +G  VN  +        LREI+
Sbjct: 24  YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRV-FNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 64  LLKELKSPHIIELIDAFPH-----KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LL     P+I+ L D F H        L+LV E M TDL  VI +  I +SP  I+ +M 
Sbjct: 82  LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L GL   H+  V+HRD+ P N+L+  +  + + DF LAR   + D   TH V  RWYR
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE-DTADANKTHYVTHRWYR 200
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT-------- 230
           APEL+   K +   VD+W+AGC+ AE+ NR+   +GS+  +QL KI    GT        
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260
Query: 231 -ATPSQWPDLAYLPDYV--EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
            ++PS         DY+      V A    ++ P+A   ALDL++KM  ++P+ RI+ +Q
Sbjct: 261 FSSPSA-------RDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ 313
Query: 288 ALEHRYFSS 296
           AL H YF S
Sbjct: 314 ALRHPYFES 322

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score =  177 bits (448), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 164/349 (46%), Gaps = 65/349 (18%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V D Y+ + ++G G+YG VY A D  T + VAIKK+    +        LREI +L  LK
Sbjct: 24  VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 70  SPHIIELID-AFPHK----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           S +II L D   P        L++V E  ++DL+ + + T IFL+   IK+ +   L G 
Sbjct: 84  SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEEHIKTILYNLLLGE 142
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------------- 165
            F H+  ++HRD+KP N L+     +K+ DFGLAR   S                     
Sbjct: 143 NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-----------NRRPF 211
              ++ T  V  RWYRAPEL+   + Y   +D+W+ GCIFAELL           NR P 
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL 262
Query: 212 LQGS-----------------SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
             GS                 S+ DQL  IF   GT T     ++   P+ +  +Y+   
Sbjct: 263 FPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINK-PEVI--KYIKLF 319
Query: 255 P------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
           P      L+  +PS SDD ++LL  M  ++P  RIT  QAL+H Y    
Sbjct: 320 PHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +  A  Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 38  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 98  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 155
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 212
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 273 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 328

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 176/347 (50%), Gaps = 54/347 (15%)
Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLL 65
           + + V  +Y   + LG+G YG+V+K+ID +TG+ VA+KKI    Q         REI +L
Sbjct: 3   VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMIL 62
Query: 66  KELKS-PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
            EL    +I+ L++     +  +++LVF++METDL  VIR  NI L P   +  +   +K
Sbjct: 63  TELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIR-ANI-LEPVHKQYVVYQLIK 120
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ----------- 171
            + + H   +LHRDMKP+N+L+ +   +K+ADFGL+R F +  RR T+            
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI-RRVTNNIPLSINENTEN 179
Query: 172 -----------VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ 220
                      V  RWYRAPE+L G+ +Y  G+D+W+ GCI  E+L  +P   GSS ++Q
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 221 LGKIFAAF---------GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLF----------- 260
           L +I                +P     +  L + VE   +     R +F           
Sbjct: 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVE---IRQSNKRDIFTKWKNLLLKIN 296
Query: 261 --PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT-EPN 304
                +++ALDLL K+  ++P  RI+A  AL+H + S    P  EPN
Sbjct: 297 PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPN 343

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 39  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 99  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 156
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 213
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHVQFLIYQILR 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 189
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 189
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 25  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 85  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 199
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 260 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score =  173 bits (438), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 29  EVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 88
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 89  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 146
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 147 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 203
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 263
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 264 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 319

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 158/320 (49%), Gaps = 42/320 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQT--VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           +G GTYG VYKA           A+K+I    +  G++ +A REI LL+ELK P++I L 
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLRELKHPNVISLQ 84
Query: 78  DAFPHKGN--LHLVFEFMETDLETVIR--------NTNIFLSPADIKSYMQMTLKGLAFC 127
             F    +  + L+F++ E DL  +I+           + L    +KS +   L G+ + 
Sbjct: 85  KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 128 HKKWVLHRDMKPNNLLIGSHG----QLKLADFGLARIFGSPDRRFTH---QVFARWYRAP 180
           H  WVLHRD+KP N+L+   G    ++K+AD G AR+F SP +        V   WYRAP
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG-SSDI--------DQLGKIFAAFGTA 231
           ELL GA+ Y   +D+WA GCIFAELL   P       DI        DQL +IF   G  
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 264
Query: 232 TPSQWPDLAYLP-------DYVEYQYVAAPPLRSLFPSA---SDDALDLLSKMFTYDPKA 281
               W D+  +P       D+    Y     ++ +          A  LL K+ T DP  
Sbjct: 265 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIK 324
Query: 282 RITAQQALEHRYFSSAPLPT 301
           RIT++QA++  YF   PLPT
Sbjct: 325 RITSEQAMQDPYFLEDPLPT 344

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score =  172 bits (436), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 155/310 (50%), Gaps = 15/310 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+    
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 300 P-TEPNKLPR 308
           P  EP   PR
Sbjct: 314 PDDEPVADPR 323

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score =  172 bits (436), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 39  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 99  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 156
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D      V  RWYRAPE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGXVATRWYRAPEI 213
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 169/299 (56%), Gaps = 33/299 (11%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVV++A   ++ + VAIKK+   K+ +       RE+++++ +K P++
Sbjct: 42  YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN------RELQIMRIVKHPNV 94
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRNTNIF------LSPADIKSYMQMTL 121
           ++L   F   G+      L+LV E++    ETV R +  +      +    IK YM   L
Sbjct: 95  VDLKAFFYSNGDKKDEVFLNLVLEYVP---ETVYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIF--GSPDRRFTHQVFARWYR 178
           + LA+ H   + HRD+KP NLL+    G LKL DFG A+I   G P+      + +R+YR
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN---VSXICSRYYR 208
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APEL+FGA  Y   +D+W+ GC+ AEL+  +P   G S IDQL +I    GT +  Q   
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268
Query: 239 LAYLPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           +   P+Y+E+++  +   P   +F P    DA+DL+S++  Y P AR+TA +AL H +F
Sbjct: 269 MN--PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  171 bits (434), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 21  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 81  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 138
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 195
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score =  171 bits (434), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 152/301 (50%), Gaps = 21/301 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G YG V  A D +  Q VA+KK+    Q         RE++LLK LK  ++I L+D 
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 80  FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           F    ++      +LV   M  DL  ++++    LS   ++  +   L+GL + H   ++
Sbjct: 96  FTPATSIEDFSEVYLVTTLMGADLNNIVKSQA--LSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+KP+N+ +    +L++ DFGLAR     D   T  V  RWYRAPE++     Y   V
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ GCI AELL  +    GS  IDQL +I    GT +P     LA +       Y+ +
Sbjct: 211 DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV---LAKISSEHARTYIQS 267
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT-EPNKL 306
            P      L S+F  A+  A+DLL +M   D   R++A +AL H YFS    P  EP   
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 327
Query: 307 P 307
           P
Sbjct: 328 P 328

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score =  171 bits (434), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 31  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 91  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 148
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 205
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 21  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 81  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 138
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 195
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 31  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 91  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 148
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 205
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 42  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 159
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 216
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 25  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 85  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 199
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 21  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 81  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 138
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 195
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 156/312 (50%), Gaps = 21/312 (6%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  + D K+G  +A+KK+    Q         RE++LLK +
Sbjct: 48  EVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 69  KSPHIIELIDAFPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F    +L      +LV   M  DL  +++     L+   ++  +   L+
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 165
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 222
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  I+QL +I    GT   S    ++ +
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASV---ISRM 279
Query: 243 PDYVEYQYVAAPP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
           P +    Y+ + P         +F  A+  A+DLL KM   D   RITA +AL H YFS 
Sbjct: 280 PSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
Query: 297 APLP-TEPNKLP 307
              P  EP   P
Sbjct: 340 YHDPDDEPESEP 351

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  ++++    L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGL R     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 21  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 81  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 138
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 195
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 24  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 84  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 141
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 198
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 18  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 78  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 135
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 136 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 192
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 252
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 253 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 308

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 39  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 99  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 156
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 213
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 274 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 143
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 200
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 24  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 84  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 141
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 198
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 30  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 90  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 147
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 204
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 24  EVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 84  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 141
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 198
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 31  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 91  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 148
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 205
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 38  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 98  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 155
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 212
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 273 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 328

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 30  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 90  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 147
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 204
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 16  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 76  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 133
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 190
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 306

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 24  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 84  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 141
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 198
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D      V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G YG V  A+D +TG  VAIKK+    Q E     A RE++LLK ++  ++I L+D 
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 80  FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           F     L      +LV  FM TDL  ++++    L    I+  +   LKGL + H   ++
Sbjct: 93  FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+KP NL +    +LK+ DFGLAR     D      V  RWYRAPE++    +Y   V
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ GCI AE++  +   +GS  +DQL +I    GT  P+++  +  L       Y+  
Sbjct: 208 DIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP-PAEF--VQRLQSDEAKNYMKG 264
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
            P        S+  +AS  A++LL KM   D + R+TA +AL H YF S
Sbjct: 265 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score =  171 bits (432), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 16  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 76  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 133
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 190
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 306

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score =  171 bits (432), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 25  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 85  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 199
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score =  171 bits (432), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D      V  RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEI 189
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +A  P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score =  171 bits (432), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 189
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score =  171 bits (432), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 25  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 85  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 199
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score =  171 bits (432), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 17  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 77  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 134
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 135 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEI 191
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 251
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 252 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 307

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 151/301 (50%), Gaps = 21/301 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G YG V  A D +  Q VA+KK+    Q         RE++LLK LK  ++I L+D 
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 80  FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           F    ++      +LV   M  DL  +++     LS   ++  +   L+GL + H   ++
Sbjct: 96  FTPATSIEDFSEVYLVTTLMGADLNNIVKCQA--LSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+KP+N+ +    +L++ DFGLAR     D   T  V  RWYRAPE++     Y   V
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ GCI AELL  +    GS  IDQL +I    GT +P     LA +       Y+ +
Sbjct: 211 DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV---LAKISSEHARTYIQS 267
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT-EPNKL 306
            P      L S+F  A+  A+DLL +M   D   R++A +AL H YFS    P  EP   
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 327
Query: 307 P 307
           P
Sbjct: 328 P 328

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 151/301 (50%), Gaps = 21/301 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G YG V  A D +  Q VA+KK+    Q         RE++LLK LK  ++I L+D 
Sbjct: 28  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 80  FPHKGNL------HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           F    ++      +LV   M  DL  +++     LS   ++  +   L+GL + H   ++
Sbjct: 88  FTPATSIEDFSEVYLVTTLMGADLNNIVKCQA--LSDEHVQFLVYQLLRGLKYIHSAGII 145
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+KP+N+ +    +L++ DFGLAR     D   T  V  RWYRAPE++     Y   V
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTV 202
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ GCI AELL  +    GS  IDQL +I    GT +P     LA +       Y+ +
Sbjct: 203 DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV---LAKISSEHARTYIQS 259
Query: 254 PP------LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT-EPNKL 306
            P      L S+F  A+  A+DLL +M   D   R++A +AL H YFS    P  EP   
Sbjct: 260 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 319
Query: 307 P 307
           P
Sbjct: 320 P 320

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ D+GLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 42  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 159
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D      V  RWYRAPE+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYVATRWYRAPEI 216
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score =  169 bits (428), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D      V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score =  169 bits (427), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 30/316 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           +  RY+  + LG G  G+V+ A+D    + VAIKKI L   +   +  ALREIK+++ L 
Sbjct: 9   LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKH--ALREIKIIRRLD 66
Query: 70  SPHIIELIDAFPHKGN--------------LHLVFEFMETDLETVIRNTNIFLSPADIKS 115
             +I+++ +     G+              +++V E+METDL  V+    +    A  + 
Sbjct: 67  HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHA--RL 124
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFTHQ--- 171
           +M   L+GL + H   VLHRD+KP NL I +    LK+ DFGLARI    D  ++H+   
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKGHL 181
Query: 172 ---VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228
              +  +WYR+P LL     Y   +D+WAAGCIFAE+L  +    G+ +++Q+  I  + 
Sbjct: 182 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241
Query: 229 GTATPSQWPD-LAYLPDYVEYQYVA-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
                    + L+ +P Y+         PL  L P  S +A+D L ++ T+ P  R+TA+
Sbjct: 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301
Query: 287 QALEHRYFSSAPLPTE 302
           +AL H Y S    P +
Sbjct: 302 EALSHPYMSIYSFPMD 317

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score =  168 bits (426), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DF LAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score =  168 bits (426), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 143
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR         T  V  RWYRAPE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEI 200
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score =  168 bits (425), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 143
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR         T  V  RWYRAPE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEI 200
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score =  168 bits (425), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 168/310 (54%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+  GK  +       RE++++++L   +I
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 310 --RDPNVKLP 317

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score =  168 bits (425), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 143
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR         T  V  RWYRAPE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATRWYRAPEI 200
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score =  168 bits (425), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+  FGLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  167 bits (424), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ D GLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  167 bits (424), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ D GLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  167 bits (423), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 19  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69  KSPHIIELIDAF-PHK-----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F P +      +++LV   M  DL  +++     L+   ++  +   L+
Sbjct: 79  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 136
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ D GLAR     D   T  V  RWYRAPE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYVATRWYRAPEI 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score =  167 bits (423), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+  GK  +       RE++++++L   +I
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+ +  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 252 -PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 310 --RDPNVKLP 317

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score =  167 bits (423), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 166/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+  GK  +       RE++++++L   +I
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+ +  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 252 -PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 310 --RDPNVKLP 317

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 226
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 285
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F
Sbjct: 286 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 58  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 111
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 172 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 228
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 287
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F
Sbjct: 288 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 50  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 103
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 164 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 220
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 279
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F
Sbjct: 280 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 60  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 113
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 174 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 230
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 289
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F
Sbjct: 290 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 154
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 215 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 271
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 330
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F
Sbjct: 331 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 162/296 (54%), Gaps = 26/296 (8%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 27  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 80
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 81  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 141 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 197
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 256
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F
Sbjct: 257 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 161/296 (54%), Gaps = 26/296 (8%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 226
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 285
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F
Sbjct: 286 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 168/310 (54%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 35  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 88
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 89  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 149 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 205
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 264
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 265 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 322
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 323 --RDPNVKLP 330

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 168/310 (54%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+  +   + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 310 --RDPNVKLP 317

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 34  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 88  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 204
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 263
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 264 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 321
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 322 --RDPNVKLP 329

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 30  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 83
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 84  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 200
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 259
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 260 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 317
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 318 --RDPNVKLP 325

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score =  166 bits (419), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 41  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 94
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 95  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 155 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 211
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 270
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 271 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 328
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 329 --RDPNVKLP 336

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score =  166 bits (419), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 76  VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 310 --RDPNVKLP 317

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score =  166 bits (419), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 34  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 88  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 204
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 263
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 264 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 321
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 322 --RDPNVKLP 329

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score =  166 bits (419), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 310 --RDPNVKLP 317

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score =  166 bits (419), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 26  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 79
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 80  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 140 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 196
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 255
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 256 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 313
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 314 --RDPNVKLP 321

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score =  165 bits (418), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 192
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 309
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 310 --RDPNVKLP 317

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score =  165 bits (418), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 30/310 (9%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE++++++L   +I
Sbjct: 23  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 76
Query: 74  IELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           + L   F   G       L+LV +++   +  V R+       L    +K YM    + L
Sbjct: 77  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 125 AFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE 181
           A+ H   + HRD+KP NLL+      LKL DFG A+  + G P+      + +R+YRAPE
Sbjct: 137 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPE 193
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q  ++  
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 252
Query: 242 LPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
            P+Y E+++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F    
Sbjct: 253 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL- 310
Query: 299 LPTEPN-KLP 307
              +PN KLP
Sbjct: 311 --RDPNVKLP 318

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 163/355 (45%), Gaps = 73/355 (20%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           ++ DRY  R ++G G+YG V +A D    + VAIKKI    +        LREI +L  L
Sbjct: 50  QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL 109
Query: 69  KSPHIIELIDAFPHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
              H+++++D    K       L++V E  ++D + + R T ++L+   IK+ +   L G
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR-TPVYLTELHIKTLLYNLLVG 168
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------------ 165
           + + H   +LHRD+KP N L+     +K+ DFGLAR    P+                  
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 166 ---------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--------- 207
                    R+ T  V  RWYRAPEL+   + Y   +DVW+ GCIFAELLN         
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288
Query: 208 --RRPFLQGSS--------------------DIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
             R P   GSS                    + DQL  IF   G  TPS+  D+  L   
Sbjct: 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILG--TPSE-EDIEALEKE 345
Query: 246 VEYQYVAAPPLR------SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
              +Y+   P R        FP++S DA+ LL +M  ++P  RIT  + L H +F
Sbjct: 346 DAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 158/353 (44%), Gaps = 68/353 (19%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           KV D Y  + ++G G+YG VY A D    + VAIKK+    +        LREI +L  L
Sbjct: 25  KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 69  KSPHIIELID-AFPHK----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           KS +II L D   P        L++V E  ++DL+ + + T IFL+   +K+ +   L G
Sbjct: 85  KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEQHVKTILYNLLLG 143
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------------ 165
             F H+  ++HRD+KP N L+     +K+ DFGLAR   S                    
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 166 -------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-----------N 207
                  ++ T  V  RWYRAPEL+   + Y   +D+W+ GCIFAELL           N
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTN 263
Query: 208 RRPFLQGS-----------------SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
           R P   GS                 S+ DQL  IF   GT  P +  DL  +      +Y
Sbjct: 264 RFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTP-PEE--DLKCITKQEVIKY 320
Query: 251 VAAPPLRS------LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
           +   P R        + S S + +DLL  M  ++ + RIT  +AL H Y    
Sbjct: 321 IKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDV 373

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 160/323 (49%), Gaps = 25/323 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY + + +G G  G+V  A DT  G  VA+KK+    Q +     A RE+ L
Sbjct: 15  DSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVL 74
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LK +   +II L++ F P K      +++LV E M+ +L  VI   ++ L    +   + 
Sbjct: 75  LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLY 131
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR   S +   T  V  R+YR
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ASTNFMMTPYVVTRYYR 190
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  EL+      QG+  IDQ  K+    GT +      
Sbjct: 191 APEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 249
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +A   L    +FPS S+        A DLLSKM   DP  RI+
Sbjct: 250 LQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 309
Query: 285 AQQALEHRYFSSAPLPTEPNKLP 307
             +AL H Y +    P E    P
Sbjct: 310 VDEALRHPYITVWYDPAEAEAPP 332

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score =  155 bits (391), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 312 VDDALQHPYINVWYDPAE 329

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score =  154 bits (389), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 312 VDDALQHPYINVWYDPAE 329

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score =  154 bits (389), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 159/323 (49%), Gaps = 25/323 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY + + +G G  G+V  A DT  G  VA+KK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           LK +   +II L++ F P K      +++LV E M+ +L  VI   ++ L    +   + 
Sbjct: 77  LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR     +   T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ACTNFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y A VD+W+ GCI  EL+      QG+  IDQ  K+    GT +      
Sbjct: 193 APEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +    L    +FPS S+        A DLLSKM   DP  RI+
Sbjct: 252 LQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 311
Query: 285 AQQALEHRYFSSAPLPTEPNKLP 307
             +AL H Y +    P E    P
Sbjct: 312 VDEALRHPYITVWYDPAEAEAPP 334

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 55  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 171
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 230
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 350 VDDALQHPYINVWYDPAE 367

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 10  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 70  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLY 126
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 185
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 186 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 305 VDDALQHPYINVWYDPAE 322

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 18  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 78  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 134
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 193
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 313 VDDALQHPYINVWYDPAE 330

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 16  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 75
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 76  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 132
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 191
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 192 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 250
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 251 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 310
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 311 VDDALQHPYINVWYDPAE 328

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 155/311 (49%), Gaps = 25/311 (8%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFS 295
              AL+H Y +
Sbjct: 312 VDDALQHPYIN 322

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 55  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 171
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 230
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 350 VDDALQHPYINVWYDPAE 367

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score =  153 bits (387), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 312 VDDALQHPYINVWYDPAE 329

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score =  153 bits (387), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 312 VDDALQHPYINVWYDPAE 329

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 18  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 78  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 134
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 193
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 313 VDDALQHPYINVWYDPAE 330

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 11  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 71  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 127
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 186
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 187 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 306 VDDALQHPYINVWYDPAE 323

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 11  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 71  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 127
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 186
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 187 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 306 VDDALQHPYINVWYDPAE 323

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 10  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 70  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 126
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 185
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 186 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 285 AQQALEHRYFSSAPLPTE 302
              AL+H Y +    P E
Sbjct: 305 VDDALQHPYINVWYDPAE 322

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 155/311 (49%), Gaps = 25/311 (8%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      +++LV E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 LA-YLPDYVE----YQYVAAPPL--RSLFPSASD-------DALDLLSKMFTYDPKARIT 284
           L   + +YVE    Y  +  P L   SLFP+ S+        A DLLSKM   DP  RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 285 AQQALEHRYFS 295
              AL+H Y +
Sbjct: 312 VDDALQHPYIN 322

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  150 bits (380), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT +P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  150 bits (380), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT +P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT +P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T +V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPEVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNALKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT +P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  149 bits (375), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT +P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 18  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 78  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 134
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 193
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT  P     
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 253 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 311
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 312 SVDEALQHPYINVWYDPSEAEAPPPKIP 339

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score =  148 bits (373), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+       +V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMEPEVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P+    
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKK 251
Query: 239 LA-----YL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRNYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score =  147 bits (372), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 22  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 81
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 82  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 138
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 197
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 198 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 256
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 257 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 315
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 316 SVDEALQHPYINVWYDPSEAEAPPPKIP 343

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score =  147 bits (371), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 11  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 71  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 127
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 186
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 187 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 246 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 304
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 305 SVDEALQHPYINVWYDPSEAEAPPPKIP 332

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+       +V  R+YR
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMEPEVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 193 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ G I  E++       G+  IDQ  K+    GT +P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 158/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 19  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 78
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 79  MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLY 135
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+        V  R+YR
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMVPFVVTRYYR 194
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ GCI  E++       G+  IDQ  K+    GT  P     
Sbjct: 195 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 253
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 254 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 312
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 313 SVDEALQHPYINVWYDPSEAEAPPPKIP 340

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 17  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 65  LKELKSPHIIELIDAF-PHKG-----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F P K      ++++V E M+ +L  VI+   + L    +   + 
Sbjct: 77  MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLY 133
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G+     T  V  R+YR
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYR 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G   Y   VD+W+ G I  E++       G+  IDQ  K+    GT +P     
Sbjct: 193 APEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 239 L-----AYL---PDYVEYQYVAAPPLRSLFPSASD-------DALDLLSKMFTYDPKARI 283
           L      Y+   P Y  Y +    P   LFP+ S+        A DLLSKM   D   RI
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 284 TAQQALEHRYFSSAPLPTE----PNKLP 307
           +  +AL+H Y +    P+E    P K+P
Sbjct: 311 SVDEALQHPYINVWYDPSEAEAPPPKIP 338

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score =  144 bits (364), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+ +       REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKNK-----IKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  141 bits (356), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 174/383 (45%), Gaps = 67/383 (17%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           + +Y   + LG G++G+V +  D ++G+  A+KK+    + +       RE+ ++K L  
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN------RELDIMKVLDH 59
Query: 71  PHIIELIDAFPHKGN--------------------------------------LHLVFEF 92
            +II+L+D F   G+                                      L+++ E+
Sbjct: 60  VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119
Query: 93  METDLETVIRNTNIFLS-----PADIKS-YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146
           +   L  V+++   F+      P ++ S Y+    + + F H   + HRD+KP NLL+ S
Sbjct: 120 VPDTLHKVLKS---FIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
Query: 147 H-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL 205
               LKL DFG A+    P       + +R+YRAPEL+ GA +Y   +D+W+ GC+F EL
Sbjct: 177 KDNTLKLCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235
Query: 206 LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY--VAAPPLRSLFPSA 263
           +  +P   G + IDQL +I    GT T  Q   +   P Y E ++  + A   R + P  
Sbjct: 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHYTEVRFPTLKAKDWRKILPEG 293
Query: 264 SDD-ALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP-----NKLPRPATKRASKA 317
           +   A+DLL ++  Y+P  RI   +A+ H +F       E      +  P    +   + 
Sbjct: 294 TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQL 353
Query: 318 SDFNPQEGPTVLSPPRKTRRVMP 340
            +F+P E   +  P     R++P
Sbjct: 354 FNFSPYELSII--PGNVLNRILP 374

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score =  137 bits (345), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 154/323 (47%), Gaps = 30/323 (9%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           S+K  DR+    + G+GT+G V    +  TG +VAIKK+    Q        L+ ++ L 
Sbjct: 18  SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV---IQDPRFRNRELQIMQDLA 74
Query: 67  ELKSPHIIELIDAFPHKGN-------LHLVFEFMETDLETVIRN---TNIFLSPADIKSY 116
            L  P+I++L   F   G        L++V E++   L    RN     +   P  IK +
Sbjct: 75  VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 117 MQMTLKGLAFCH--KKWVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVF 173
           +   ++ +   H     V HRD+KP+N+L+  + G LKL DFG A+   SP       + 
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL-SPSEPNVAYIC 193
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           +R+YRAPEL+FG + Y   VD+W+ GCIFAE++   P  +G +   QL +I    G  + 
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSAS----DDALDLLSKMFTYDPKARITAQQAL 289
                L      V+       P  ++F   S     +A DLLS +  Y P+ R+   +AL
Sbjct: 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313
Query: 290 EHRYFSSAPLPTEPNKLPRPATK 312
            H YF         ++L  PATK
Sbjct: 314 CHPYF---------DELHDPATK 327

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 35/292 (11%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
           +DRY  + VLG+G++G V    D  TGQ  A+K I  R  KQK     + LRE++LLK+L
Sbjct: 49  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 107
Query: 69  KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             P+I++L + F  KG  +LV E +   +L   I +   F S  D    ++  L G+ + 
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYM 166
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           HK  ++HRD+KP NLL+ S  +   +++ DFGL+  F    ++   ++   +Y APE+L 
Sbjct: 167 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLH 225
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           G   Y    DVW+ G I   LL+  P   G+++ D L K+     T    QW        
Sbjct: 226 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-------- 275
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                              S+ A DL+ KM TY P  RI+A+ AL+H +  +
Sbjct: 276 ----------------KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 35/292 (11%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
           +DRY  + VLG+G++G V    D  TGQ  A+K I  R  KQK     + LRE++LLK+L
Sbjct: 48  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 106
Query: 69  KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             P+I++L + F  KG  +LV E +   +L   I +   F S  D    ++  L G+ + 
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYM 165
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           HK  ++HRD+KP NLL+ S  +   +++ DFGL+  F    ++   ++   +Y APE+L 
Sbjct: 166 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLH 224
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           G   Y    DVW+ G I   LL+  P   G+++ D L K+     T    QW        
Sbjct: 225 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-------- 274
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                              S+ A DL+ KM TY P  RI+A+ AL+H +  +
Sbjct: 275 ----------------KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 35/292 (11%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
           +DRY  + VLG+G++G V    D  TGQ  A+K I  R  KQK     + LRE++LLK+L
Sbjct: 31  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 89
Query: 69  KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             P+I++L + F  KG  +LV E +   +L   I +   F S  D    ++  L G+ + 
Sbjct: 90  DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYM 148
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           HK  ++HRD+KP NLL+ S  +   +++ DFGL+  F    ++   ++   +Y APE+L 
Sbjct: 149 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLH 207
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           G   Y    DVW+ G I   LL+  P   G+++ D L K+     T    QW  +     
Sbjct: 208 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV----- 260
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                              S+ A DL+ KM TY P  RI+A+ AL+H +  +
Sbjct: 261 -------------------SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 35/292 (11%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
           +DRY  + VLG+G++G V    D  TGQ  A+K I  R  KQK     + LRE++LLK+L
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 83
Query: 69  KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             P+I++L + F  KG  +LV E +   +L   I +   F S  D    ++  L G+ + 
Sbjct: 84  DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYM 142
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           HK  ++HRD+KP NLL+ S  +   +++ DFGL+  F +  ++   ++   +Y APE+L 
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLH 201
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           G   Y    DVW+ G I   LL+  P   G+++ D L K+     T    QW        
Sbjct: 202 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-------- 251
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                              S+ A DL+ KM TY P  RI+A+ AL+H +  +
Sbjct: 252 ----------------KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + VA+K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVAVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N+LI   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVLIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 145/292 (49%), Gaps = 35/292 (11%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKEL 68
           +DRY  + VLG+G++G V    D  TGQ  A+K I  R  KQK     + LRE++LLK+L
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLKQL 83
Query: 69  KSPHIIELIDAFPHKGNLHLVFE-FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             P+I +L + F  KG  +LV E +   +L   I +   F S  D    ++  L G+ + 
Sbjct: 84  DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGITYX 142
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           HK  ++HRD+KP NLL+ S  +   +++ DFGL+  F +  ++   ++   +Y APE+L 
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKXKDKIGTAYYIAPEVLH 201
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
           G   Y    DVW+ G I   LL+  P   G+++ D L K+     T    QW        
Sbjct: 202 GT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-------- 251
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                              S+ A DL+ K  TY P  RI+A+ AL+H +  +
Sbjct: 252 ----------------KKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQT 287

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 38/310 (12%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           A+RY    +LG+G++G V K  D  T Q  A+K I     K     T LRE++LLK+L  
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 71  PHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L +      + ++V E        + +I+      S  D    ++    G+ + H
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 129 KKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
           K  ++HRD+KP N+L+ S  +   +K+ DFGL+  F   + +   ++   +Y APE+L G
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG 197
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
              Y    DVW+AG I   LL+  P   G ++ D L ++          QW         
Sbjct: 198 T--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--------- 246
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH----RYFSSAPLPT 301
                           + SDDA DL+ KM T+ P  RITA Q LEH    +Y S  P  +
Sbjct: 247 ---------------RTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTIS 291
Query: 302 EPNKLPRPAT 311
           +   L    T
Sbjct: 292 DLPSLESAMT 301

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 149/324 (45%), Gaps = 43/324 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTAL-REIKLLKEL 68
           D Y   EV+G+G + VV + I+ +TGQ  A+K + + K     G++   L RE  +   L
Sbjct: 24  DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFME-TDL--ETVIR-NTNIFLSPADIKSYMQMTLKGL 124
           K PHI+EL++ +   G L++VFEFM+  DL  E V R +     S A    YM+  L+ L
Sbjct: 84  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            +CH   ++HRD+KP N+L+ S      +KL DFG+A   G        +V    + APE
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           ++   + YG  VDVW  G I   LL+      G+ +    G I   +    P QW  +  
Sbjct: 204 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY-KMNPRQWSHI-- 259
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH-------RYF 294
                                 S+ A DL+ +M   DP  RIT  +AL H       RY 
Sbjct: 260 ----------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 297
Query: 295 SSAPLPTEPNKLPRPATKRASKAS 318
               LP    +L +   +R  K +
Sbjct: 298 YKIHLPETVEQLRKFNARRKLKGA 321

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    +     ++ +   K        RE+K+L+ L+   +II+LID
Sbjct: 46  LGRGKYSEVFEAINITNNE-----RVVVKILKPVKKKKIKREVKILENLRGGTNIIKLID 100
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE++  TD + + +     L+  DI+ YM   LK L +CH K ++HR
Sbjct: 101 TVKDPVSKTPALVFEYINNTDFKQLYQ----ILTDFDIRFYMYELLKALDYCHSKGIMHR 156
Query: 136 DMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP+N++I  H Q  L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +
Sbjct: 157 DVKPHNVMI-DHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSL 214
Query: 194 DVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
           D+W+ GC+ A ++ RR PF  G  + DQL +I    GT     +    ++     +  + 
Sbjct: 215 DMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDIL 274
Query: 253 APPLRSLFPS---------ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               R  + +          S +ALDLL K+  YD + R+TA++A+EH YF
Sbjct: 275 GQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    +     ++ +   K        RE+K+L+ L+   +II+LID
Sbjct: 51  LGRGKYSEVFEAINITNNE-----RVVVKILKPVKKKKIKREVKILENLRGGTNIIKLID 105
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE++  TD + + +     L+  DI+ YM   LK L +CH K ++HR
Sbjct: 106 TVKDPVSKTPALVFEYINNTDFKQLYQ----ILTDFDIRFYMYELLKALDYCHSKGIMHR 161
Query: 136 DMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP+N++I  H Q  L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +
Sbjct: 162 DVKPHNVMI-DHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSL 219
Query: 194 DVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
           D+W+ GC+ A ++ RR PF  G  + DQL +I    GT     +    ++     +  + 
Sbjct: 220 DMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDIL 279
Query: 253 APPLRSLFPS---------ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               R  + +          S +ALDLL K+  YD + R+TA++A+EH YF
Sbjct: 280 GQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 161/344 (46%), Gaps = 59/344 (17%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           VA RY   +V+G+G++G V KA D K  Q VA+K +R  K+    +  A  EI++L+ L+
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLR 151
Query: 70  ------SPHIIELIDAFPHKGNLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQMTLK 122
                 + ++I +++ F  + ++ + FE +  +L E + +N     S   ++ +    L+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
            L   HK  ++H D+KP N+L+   G+  +K+ DFG +       +R    + +R+YRAP
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAP 268
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ----- 235
           E++ GA+ YG  +D+W+ GCI AELL   P L G  + DQL  +    G   PSQ     
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG--MPSQKLLDA 325
Query: 236 ---WPDLAYLPDYVEYQYVA--------------------APPLRSLFPSA---SDDA-- 267
                +      Y  Y  V                      PP    + +A    DD   
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLF 385
Query: 268 LDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT 311
           LD L +   +DP  R+T  QAL H        P    +LP+P T
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRH--------PWLRRRLPKPPT 421

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 34/286 (11%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           A+RY    +LG+G++G V K  D  T Q  A+K I     K     T LRE++LLK+L  
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 71  PHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L +      + ++V E        + +I+      S  D    ++    G+ + H
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 129 KKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
           K  ++HRD+KP N+L+ S  +   +K+ DFGL+  F   + +   ++   +Y APE+L G
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG 197
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
              Y    DVW+AG I   LL+  P   G ++ D L ++          QW         
Sbjct: 198 T--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--------- 246
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                           + SDDA DL+ KM T+ P  RITA Q LEH
Sbjct: 247 ---------------RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 34/286 (11%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           A+RY    +LG+G++G V K  D  T Q  A+K I     K     T LRE++LLK+L  
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 71  PHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L +      + ++V E        + +I+      S  D    ++    G+ + H
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 129 KKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
           K  ++HRD+KP N+L+ S  +   +K+ DFGL+  F   + +   ++   +Y APE+L G
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG 197
Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
              Y    DVW+AG I   LL+  P   G ++ D L ++          QW         
Sbjct: 198 T--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--------- 246
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                           + SDDA DL+ KM T+ P  RITA Q LEH
Sbjct: 247 ---------------RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 153/301 (50%), Gaps = 41/301 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
               P      LVFE +       +R T   L+  DI+ YM   LK L +CH   ++HRD
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLRQT---LTDYDIRFYMYEILKALDYCHSMGIMHRD 156
Query: 137 MKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           +KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDM 215
Query: 196 WAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVAA 253
           W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y     
Sbjct: 216 WSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIELD 266
Query: 254 PPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
           P    +                     S +ALD L K+  YD ++R+TA++A+EH YF +
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 297 A 297
Sbjct: 327 V 327

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 44  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 98
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 99  IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 154
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 155 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 213
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 214 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 264
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324
Query: 296 SA 297
           + 
Sbjct: 325 TV 326

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 154/299 (51%), Gaps = 43/299 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 45  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 99
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 155
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 265
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 296 SA 297
           + 
Sbjct: 326 TV 327

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 44  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 98
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 99  IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 154
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 155 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 213
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 214 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 264
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324
Query: 296 SA 297
           + 
Sbjct: 325 TV 326

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score =  125 bits (314), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 50  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 104
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 105 IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 160
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 161 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 219
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 220 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 270
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 271 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 330
Query: 296 SA 297
           + 
Sbjct: 331 TV 332

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score =  125 bits (313), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 43/302 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELID 78
           LG G Y  V++AI+    + V +K ++  K+K        REIK+L+ L+  P+II L D
Sbjct: 43  LGRGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLAD 97
Query: 79  AF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
               P      LVFE +  TD + + +     L+  DI+ YM   LK L +CH   ++HR
Sbjct: 98  IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 153
Query: 136 DMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           D+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL   + Y   +D
Sbjct: 154 DVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 212
Query: 195 VWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYVA 252
           +W+ GC+ A ++ R+ PF  G  + DQL +I    GT           L DY++ Y    
Sbjct: 213 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED---------LYDYIDKYNIEL 263
Query: 253 APPLRSLFPS-----------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P    +                     S +ALD L K+  YD ++R+TA++A+EH YF 
Sbjct: 264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323
Query: 296 SA 297
           + 
Sbjct: 324 TV 325

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  124 bits (311), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 55/342 (16%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           VA RY   +V+G+G +G V KA D K  Q VA+K +R  K+    +  A  EI++L+ L+
Sbjct: 95  VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLR 151
Query: 70  ------SPHIIELIDAFPHKGNLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQMTLK 122
                 + ++I +++ F  + ++ + FE +  +L E + +N     S   ++ +    L+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
            L   HK  ++H D+KP N+L+   G+  +K+ DFG +       +R    + +R+YRAP
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYXXIQSRFYRAP 268
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA------TPS 234
           E++ GA+ YG  +D+W+ GCI AELL   P L G  + DQL  +    G           
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASK 327
Query: 235 QWPDLAYLPDYVEYQYVA--------------------APPLRSLFPSA---SDDA--LD 269
           +  +      Y  Y  V                      PP    + +A    DD   LD
Sbjct: 328 RAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLD 387
Query: 270 LLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT 311
            L +   +DP  R+T  QAL H        P    +LP+P T
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRH--------PWLRRRLPKPPT 421

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 154/324 (47%), Gaps = 51/324 (15%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           VA RY   +V+G+G++G V KA D K  Q VA+K +R  K+    +  A  EI++L+ L+
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLR 151
Query: 70  ------SPHIIELIDAFPHKGNLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQMTLK 122
                 + ++I +++ F  + ++ + FE +  +L E + +N     S   ++ +    L+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
            L   HK  ++H D+KP N+L+   G+  +K+ DFG +       +R    + +R+YRAP
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAP 268
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ----- 235
           E++ GA+ YG  +D+W+ GCI AELL   P L G  + DQL  +    G   PSQ     
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG--MPSQKLLDA 325
Query: 236 ---WPDLAYLPDYVEYQYVA--------------------APPLRSLFPSA---SDDA-- 267
                +      Y  Y  V                      PP    + +A    DD   
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLF 385
Query: 268 LDLLSKMFTYDPKARITAQQALEH 291
           LD L +   +DP  R+T  QAL H
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRH 409

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 148/324 (45%), Gaps = 43/324 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTAL-REIKLLKEL 68
           D Y   EV+G+G + VV + I+ +TGQ  A+K + + K     G++   L RE  +   L
Sbjct: 26  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFME-TDL--ETVIR-NTNIFLSPADIKSYMQMTLKGL 124
           K PHI+EL++ +   G L++VFEFM+  DL  E V R +     S A    YM+  L+ L
Sbjct: 86  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 125 AFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            +CH   ++HRD+KP+ +L+ S      +KL  FG+A   G        +V    + APE
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           ++   + YG  VDVW  G I   LL+      G+ +    G I   +    P QW  +  
Sbjct: 206 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY-KMNPRQWSHI-- 261
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH-------RYF 294
                                 S+ A DL+ +M   DP  RIT  +AL H       RY 
Sbjct: 262 ----------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 299
Query: 295 SSAPLPTEPNKLPRPATKRASKAS 318
               LP    +L +   +R  K +
Sbjct: 300 YKIHLPETVEQLRKFNARRKLKGA 323

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 131/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 163
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +     AYL    
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----AYLN--- 274
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 275 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 335 THPYFQQV 342

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 148/324 (45%), Gaps = 43/324 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTAL-REIKLLKEL 68
           D Y   EV+G+G + VV + I+ +TGQ  A+K + + K     G++   L RE  +   L
Sbjct: 24  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFME-TDL--ETVIR-NTNIFLSPADIKSYMQMTLKGL 124
           K PHI+EL++ +   G L++VFEFM+  DL  E V R +     S A    YM+  L+ L
Sbjct: 84  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 125 AFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            +CH   ++HRD+KP+ +L+ S      +KL  FG+A   G        +V    + APE
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           ++   + YG  VDVW  G I   LL+      G+ +    G I   +    P QW  +  
Sbjct: 204 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY-KMNPRQWSHI-- 259
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH-------RYF 294
                                 S+ A DL+ +M   DP  RIT  +AL H       RY 
Sbjct: 260 ----------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 297
Query: 295 SSAPLPTEPNKLPRPATKRASKAS 318
               LP    +L +   +R  K +
Sbjct: 298 YKIHLPETVEQLRKFNARRKLKGA 321

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score =  120 bits (302), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 37/300 (12%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG------KQKEGVNFTALR 60
           +K+   +Y  ++V+G G   VV + +   TG   A+K + +       +Q E V     R
Sbjct: 89  AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148
Query: 61  EIKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM 119
           E  +L+++   PHII LID++     + LVF+ M            + LS  + +S M+ 
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            L+ ++F H   ++HRD+KP N+L+  + Q++L+DFG +     P  +         Y A
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLRELCGTPGYLA 267
Query: 180 PELLFGAKQ-----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           PE+L  +       YG  VD+WA G I   LL   P       I  L  I       +  
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP 327
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           +W D                         S    DL+S++   DP+AR+TA+QAL+H +F
Sbjct: 328 EWDD------------------------RSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 86  PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL    
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 253
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 314 THPYFQQV 321

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 131/251 (52%), Gaps = 33/251 (13%)
Query: 68  LKSPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           +  P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L 
Sbjct: 83  MGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALD 139
Query: 126 FCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           +CH + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL 
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 198
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             + Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL 
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN 253
Query: 244 DYVEYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQ 286
              +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA 
Sbjct: 254 ---KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 287 QALEHRYFSSA 297
           +A+ H YF   
Sbjct: 311 EAMTHPYFQQV 321

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 87  PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 143
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL    
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 254
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 315 THPYFQQV 322

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 86  PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL    
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 253
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 314 THPYFQQV 321

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 88  PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 144
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL    
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 255
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 256 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 316 THPYFQQV 323

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 86  PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL    
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 253
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 314 THPYFQQV 321

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 87  PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 143
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL    
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 254
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 315 THPYFQQV 322

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 86  PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL    
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 253
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 314 THPYFQQV 321

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 33/248 (13%)
Query: 71  PHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P+I++L+D     H     L+FE++      V+  T   L+  DI+ Y+   LK L +CH
Sbjct: 86  PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + ++HRD+KP+N++I     +L+L D+GLA  F  P + +  +V +R+++ PELL   +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 188 QYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y   +D+W+ GC+FA ++ R+ PF  G  + DQL KI    GT   +      YL    
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN-----VYLN--- 253
Query: 247 EYQYVAAPPLRSL-----------FPSASD------DALDLLSKMFTYDPKARITAQQAL 289
           +Y+    P L +L           F +A +      +A+D L K+  YD + R+TA +A+
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 290 EHRYFSSA 297
            H YF   
Sbjct: 314 THPYFQQV 321

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-----------GKQKEGVNFT 57
           K+ + Y K   LG G YG V    +       AIK I+             K  E  +  
Sbjct: 33  KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 58  ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSY 116
              EI LLK L  P+II+L D F  K   +LV EF E  +L   I N + F    D  + 
Sbjct: 93  IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANI 151
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL---KLADFGLARIFGSPDRRFTHQVF 173
           M+  L G+ + HK  ++HRD+KP N+L+ +   L   K+ DFGL+  F S D +   ++ 
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-SKDYKLRDRLG 210
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
             +Y APE+L   K+Y    DVW+ G I   LL   P   G +D D + K+         
Sbjct: 211 TAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG------ 262
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                  Y  D+ +++ +            SD+A +L+  M TYD   R TA++AL  R+
Sbjct: 263 ------KYYFDFNDWKNI------------SDEAKELIKLMLTYDYNKRCTAEEALNSRW 304

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 37/289 (12%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKEL 68
           ++DRY + + LG G YG V    D  TG   AIK I+        N  AL  E+ +LK+L
Sbjct: 19  LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
             P+I++L + F  K N +LV E     E   E ++R      S  D    M+  L G  
Sbjct: 79  DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTT 135
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           + HK  ++HRD+KP NLL+ S  +   +K+ DFGL+  F     +   ++   +Y APE+
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEV 194
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           L   K+Y    DVW+ G I   LL   P   G +D + L ++     +  P  W  +   
Sbjct: 195 L--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV--- 249
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                                SD+A  L+  M TY+P  RI+A++AL H
Sbjct: 250 ---------------------SDEAKQLVKLMLTYEPSKRISAEEALNH 277

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           +++ Y + + LG G YG V    D  T    AIK IR        N   L E+ +LK L 
Sbjct: 35  LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
            P+I++L D F  K N +LV E  +     + +I       +  D    ++  L G+ + 
Sbjct: 95  HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYL 152
Query: 128 HKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           HK  ++HRD+KP NLL+ S  +   +K+ DFGL+ +F +  ++   ++   +Y APE+L 
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYIAPEVL- 210
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             K+Y    DVW+ G I   LL   P   G +D + L K+     T    +W ++     
Sbjct: 211 -RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV----- 264
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                              S+ A DL+ +M  +D + RI+AQQALEH
Sbjct: 265 -------------------SEGAKDLIKQMLQFDSQRRISAQQALEH 292

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKEL 68
           ++DRY + + LG G YG V    D  TG   AIK I+        N  AL  E+ +LK+L
Sbjct: 2   LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
             P+I++L + F  K N +LV E     E   E ++R      S  D    M+  L G  
Sbjct: 62  DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTT 118
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           + HK  ++HRD+KP NLL+ S  +   +K+ DFGL+  F     +   ++   +Y APE+
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEV 177
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           L   K+Y    DVW+ G I   LL   P   G +D + L ++     +  P  W      
Sbjct: 178 L--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDW------ 229
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                                SD+A  L+  M TY+P  RI+A++AL H
Sbjct: 230 ------------------TQVSDEAKQLVKLMLTYEPSKRISAEEALNH 260

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 31/298 (10%)
Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           + E  L+K+  + +   E LGEG+YG VYKAI  +TGQ VAIK++ +    + +    ++
Sbjct: 18  LDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI----IK 73
Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM 119
           EI ++++  SPH+++   ++    +L +V E+     +  +IR  N  L+  +I + +Q 
Sbjct: 74  EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
           TLKGL + H    +HRD+K  N+L+ + G  KLADFG+A        +    +   ++ A
Sbjct: 134 TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMA 193
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PE++     Y    D+W+ G    E+   +P     +DI  +  IF       P+  P  
Sbjct: 194 PEVI-QEIGYNCVADIWSLGITAIEMAEGKP---PYADIHPMRAIFM-----IPTNPPPT 244
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
              P+                   SD+  D + +     P+ R TA Q L+H +  SA
Sbjct: 245 FRKPEL-----------------WSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 154/336 (45%), Gaps = 58/336 (17%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           +K  DRY    ++G+G++G V KA D    + VAIK I   K K+     A  E++LL E
Sbjct: 31  EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII---KNKKAFLNQAQIEVRLL-E 86
Query: 68  LKSPH-------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQM 119
           L + H       I+ L   F  + +L LVFE +  +L  ++RNTN   +S    + + Q 
Sbjct: 87  LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 146
Query: 120 TLKGLAFCH--KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFAR 175
               L F    +  ++H D+KP N+L+ +     +K+ DFG +   G   +R    + +R
Sbjct: 147 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSR 203
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           +YR+PE+L G   Y   +D+W+ GCI  E+    P   G++++DQ+ KI    G   P+ 
Sbjct: 204 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-PAH 261
Query: 236 WPDLA--------YLPDYV-----------EYQYVAAPPLRSLFPSASD----------- 265
             D A         LPD             EY+      L ++    +            
Sbjct: 262 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESG 321
Query: 266 ----DAL---DLLSKMFTYDPKARITAQQALEHRYF 294
               D L   DL+ +M  YDPK RI    AL+H +F
Sbjct: 322 HTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 357

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 53/302 (17%)
Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKL 64
           +SK+    Y+ RE LGEG++G V  A   KT Q VA+K I R   +K  ++    REI  
Sbjct: 3   ISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY 62
Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           LK L+ PHII+L D      ++ +V E+   +L   I      ++  + + + Q  +  +
Sbjct: 63  LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAI 121
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFA 174
            +CH+  ++HRD+KP NLL+  +  +K+ADFGL+ I           GSP+         
Sbjct: 122 EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN--------- 172
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
             Y APE++ G    G  VDVW+ G + +  L+ R PF     D + +  +F    +   
Sbjct: 173 --YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-----DDEFIPNLFKKVNSC-- 223
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                +  +PD++                 S  A  L+ +M   DP  RIT Q+     +
Sbjct: 224 -----VYVMPDFL-----------------SPGAQSLIRRMIVADPMQRITIQEIRRDPW 261
Query: 294 FS 295
           F+
Sbjct: 262 FN 263

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  114 bits (286), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 154/336 (45%), Gaps = 58/336 (17%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           +K  DRY    ++G+G++G V KA D    + VAIK I   K K+     A  E++LL E
Sbjct: 50  EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII---KNKKAFLNQAQIEVRLL-E 105
Query: 68  LKSPH-------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQM 119
           L + H       I+ L   F  + +L LVFE +  +L  ++RNTN   +S    + + Q 
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 120 TLKGLAFCH--KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFAR 175
               L F    +  ++H D+KP N+L+ +     +K+ DFG +   G   +R    + +R
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSR 222
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           +YR+PE+L G   Y   +D+W+ GCI  E+    P   G++++DQ+ KI    G   P+ 
Sbjct: 223 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-PAH 280
Query: 236 WPDLA--------YLPDYV-----------EYQYVAAPPLRSLFPSASD----------- 265
             D A         LPD             EY+      L ++    +            
Sbjct: 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESG 340
Query: 266 ----DAL---DLLSKMFTYDPKARITAQQALEHRYF 294
               D L   DL+ +M  YDPK RI    AL+H +F
Sbjct: 341 HTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 154/336 (45%), Gaps = 58/336 (17%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           +K  DRY    ++G+G++G V KA D    + VAIK I   K K+     A  E++LL E
Sbjct: 50  EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII---KNKKAFLNQAQIEVRLL-E 105
Query: 68  LKSPH-------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQM 119
           L + H       I+ L   F  + +L LVFE +  +L  ++RNTN   +S    + + Q 
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 120 TLKGLAFCH--KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFAR 175
               L F    +  ++H D+KP N+L+ +     +K+ DFG +   G   +R    + +R
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLG---QRIYQXIQSR 222
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           +YR+PE+L G   Y   +D+W+ GCI  E+    P   G++++DQ+ KI    G   P+ 
Sbjct: 223 FYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP-PAH 280
Query: 236 WPDLA--------YLPDYV-----------EYQYVAAPPLRSLFPSASD----------- 265
             D A         LPD             EY+      L ++    +            
Sbjct: 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESG 340
Query: 266 ----DAL---DLLSKMFTYDPKARITAQQALEHRYF 294
               D L   DL+ +M  YDPK RI    AL+H +F
Sbjct: 341 HTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 24/206 (11%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           + LGEG++G V  A  T TGQ VA+K I +    K  +     REI  L+ L+ PHII+L
Sbjct: 19  KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
            D    K  + +V E+   +L   I   +  +S  + + + Q  +  + +CH+  ++HRD
Sbjct: 79  YDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRD 137
Query: 137 MKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLFGA 186
           +KP NLL+  H  +K+ADFGL+ I           GSP+           Y APE++ G 
Sbjct: 138 LKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISGK 186
Query: 187 KQYGAGVDVWAAGCIFAELLNRR-PF 211
              G  VDVW+ G I   +L RR PF
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPF 212

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LGEG++G V  A  T TGQ VA+K I +    K  +     REI  L+ L+ PHII+L D
Sbjct: 22  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
               K  + +V E+   +L   I   +  +S  + + + Q  +  + +CH+  ++HRD+K
Sbjct: 82  VIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 140
Query: 139 PNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLFGAKQ 188
           P NLL+  H  +K+ADFGL+ I           GSP+           Y APE++ G   
Sbjct: 141 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISGKLY 189
Query: 189 YGAGVDVWAAGCIFAELLNRR-PF 211
            G  VDVW+ G I   +L RR PF
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPF 213

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LGEG++G V  A  T TGQ VA+K I +    K  +     REI  L+ L+ PHII+L D
Sbjct: 12  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
               K  + +V E+   +L   I   +  +S  + + + Q  +  + +CH+  ++HRD+K
Sbjct: 72  VIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 130
Query: 139 PNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLFGAKQ 188
           P NLL+  H  +K+ADFGL+ I           GSP+           Y APE++ G   
Sbjct: 131 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISGKLY 179
Query: 189 YGAGVDVWAAGCIFAELLNRR-PF 211
            G  VDVW+ G I   +L RR PF
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPF 203

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 24/206 (11%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           + LGEG++G V  A  T TGQ VA+K I +    K  +     REI  L+ L+ PHII+L
Sbjct: 14  KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
            D    K  + +V E+   +L   I   +  +S  + + + Q  +  + +CH+  ++HRD
Sbjct: 74  YDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRD 132
Query: 137 MKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLFGA 186
           +KP NLL+  H  +K+ADFGL+ I           GSP+           Y APE++ G 
Sbjct: 133 LKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------YAAPEVISGK 181
Query: 187 KQYGAGVDVWAAGCIFAELLNRR-PF 211
              G  VDVW+ G I   +L RR PF
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPF 207

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G VY A+D  TGQ VAI+++ L +Q  KE +    + EI +++E K+
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 76
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D++     L +V E++    L  V+  T   +    I +  +  L+ L F H 
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 134
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+K +N+L+G  G +KL DFG          + +  V   ++ APE++   K Y
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV-TRKAY 193
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
           G  VD+W+ G +  E++   P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP 214

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G VY A+D  TGQ VAI+++ L +Q  KE +    + EI +++E K+
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 76
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D++     L +V E++    L  V+  T   +    I +  +  L+ L F H 
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 134
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+K +N+L+G  G +KL DFG          + +  V   ++ APE++   K Y
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-TRKAY 193
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
           G  VD+W+ G +  E++   P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP 214

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G VY A+D  TGQ VAI+++ L +Q  KE +    + EI +++E K+
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 76
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D++     L +V E++    L  V+  T   +    I +  +  L+ L F H 
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 134
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+K +N+L+G  G +KL DFG          + +  V   ++ APE++   K Y
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV-TRKAY 193
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
           G  VD+W+ G +  E++   P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP 214

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G VY A+D  TGQ VAI+++ L +Q  KE +    + EI +++E K+
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 77
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D++     L +V E++    L  V+  T   +    I +  +  L+ L F H 
Sbjct: 78  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 135
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HRD+K +N+L+G  G +KL DFG          + +  V   ++ APE++   K Y
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV-TRKAY 194
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
           G  VD+W+ G +  E++   P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEP 215

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 149/344 (43%), Gaps = 51/344 (14%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
           K + D Y+  + LG G  G V  A + KT + VAIK     K  +G  +E         E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
           I++LK+L  P II++ + F  + + ++V E ME     + V+ N    L  A  K Y   
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 122
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
            L  + + H+  ++HRD+KP N+L+ S  +   +K+ DFG ++I G      T       
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           Y APE+L   G   Y   VD W+ G I F  L    PF +  + +    +I +      P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
             W ++                        S+ ALDL+ K+   DPKAR T ++AL H +
Sbjct: 242 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 294 FSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRR 337
                +  +   L     +  +K         P VL+ P  +R+
Sbjct: 278 LQDEDMKRKFQDLLSEENESTAK---------PQVLAQPSTSRK 312

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
           K + D Y+  + LG G  G V  A + KT + VAIK     K  +G  +E         E
Sbjct: 12  KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
           I++LK+L  P II++ + F  + + ++V E ME     + V+ N    L  A  K Y   
Sbjct: 72  IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 128
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
            L  + + H+  ++HRD+KP N+L+ S  +   +K+ DFG ++I G      T       
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 187
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           Y APE+L   G   Y   VD W+ G I F  L    PF +  + +    +I +      P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 247
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
             W ++                        S+ ALDL+ K+   DPKAR T ++AL H +
Sbjct: 248 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 283
Query: 294 F 294
Sbjct: 284 L 284

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS 70
           +Y + E +G+G  G VY A+D  TGQ VAI+++ L +Q  KE +    + EI +++E K+
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENKN 77
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+  +D++     L +V E++    L  V+  T   +    I +  +  L+ L F H 
Sbjct: 78  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS 135
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
             V+HR++K +N+L+G  G +KL DFG          + +  V   ++ APE++   K Y
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-TRKAY 194
Query: 190 GAGVDVWAAGCIFAELLNRRP 210
           G  VD+W+ G +  E++   P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEP 215

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
           K + D Y+  + LG G  G V  A + KT + VAIK     K  +G  +E         E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
           I++LK+L  P II++ + F  + + ++V E ME     + V+ N    L  A  K Y   
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 122
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
            L  + + H+  ++HRD+KP N+L+ S  +   +K+ DFG ++I G      T       
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           Y APE+L   G   Y   VD W+ G I F  L    PF +  + +    +I +      P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
             W ++                        S+ ALDL+ K+   DPKAR T ++AL H +
Sbjct: 242 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 294 F 294
Sbjct: 278 L 278

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
           K + D Y+  + LG G  G V  A + KT + VAIK     K  +G  +E         E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
           I++LK+L  P II++ + F  + + ++V E ME     + V+ N    L  A  K Y   
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 122
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
            L  + + H+  ++HRD+KP N+L+ S  +   +K+ DFG ++I G      T       
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           Y APE+L   G   Y   VD W+ G I F  L    PF +  + +    +I +      P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
             W ++                        S+ ALDL+ K+   DPKAR T ++AL H +
Sbjct: 242 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 294 F 294
Sbjct: 278 L 278

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
           K + D Y+  + LG G  G V  A + KT + VAIK     K  +G  +E         E
Sbjct: 5   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
           I++LK+L  P II++ + F  + + ++V E ME     + V+ N    L  A  K Y   
Sbjct: 65  IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 121
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
            L  + + H+  ++HRD+KP N+L+ S  +   +K+ DFG ++I G      T       
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 180
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           Y APE+L   G   Y   VD W+ G I F  L    PF +  + +    +I +      P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 240
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
             W ++                        S+ ALDL+ K+   DPKAR T ++AL H +
Sbjct: 241 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRHPW 276
Query: 294 F 294
Sbjct: 277 L 277

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 41/296 (13%)
Query: 4   VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REI 62
           ++ S K +D Y  +E LG+G + VV + +   TG   A K I   K+    +F  L RE 
Sbjct: 21  MNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREA 79
Query: 63  KLLKELKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQM 119
           ++ ++L+ P+I+ L D+   +   +LVF+ +   E   + V R    F S AD    +Q 
Sbjct: 80  RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQ 136
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR- 175
            L+ +A+CH   ++HR++KP NLL+ S  +   +KLADFGLA      D    H      
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 194
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
            Y +PE+L     Y   VD+WA G I +  L+   PF     D DQ  +++A        
Sbjct: 195 GYLSPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFW----DEDQ-HRLYAQIKAGA-- 246
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                        Y Y  +P   ++ P A      L+  M T +PK RITA QAL+
Sbjct: 247 -------------YDY-PSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 284

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 102 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 158
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 159 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 215
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 255
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 256 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 134/298 (44%), Gaps = 42/298 (14%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
           K + D Y+  + LG G  G V  A + KT + VAI+     K  +G  +E         E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
           I++LK+L  P II++ + F  + + ++V E ME     + V+ N    L  A  K Y   
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 247
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
            L  + + H+  ++HRD+KP N+L+ S  +   +K+ DFG ++I G      T       
Sbjct: 248 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 306
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           Y APE+L   G   Y   VD W+ G I F  L    PF +  + +    +I +      P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
             W ++                        S+ ALDL+ K+   DPKAR T ++AL H
Sbjct: 367 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRH 400

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 134/298 (44%), Gaps = 42/298 (14%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGV-NFTALRE 61
           K + D Y+  + LG G  G V  A + KT + VAI+     K  +G  +E         E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQM 119
           I++LK+L  P II++ + F  + + ++V E ME     + V+ N    L  A  K Y   
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 261
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW 176
            L  + + H+  ++HRD+KP N+L+ S  +   +K+ DFG ++I G      T       
Sbjct: 262 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 320
Query: 177 YRAPELLF--GAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           Y APE+L   G   Y   VD W+ G I F  L    PF +  + +    +I +      P
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 380
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
             W ++                        S+ ALDL+ K+   DPKAR T ++AL H
Sbjct: 381 EVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRH 414

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 36/293 (12%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + D Y   E LG+G + VV + +   TGQ  A K I   K     +    RE ++ + LK
Sbjct: 2   MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 70  SPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
            P+I+ L D+   +G  +LVF+ +   E   + V R    + S AD    +Q  L+ +  
Sbjct: 62  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILESVNH 118
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           CH   ++HRD+KP NLL+ S  +   +KLADFGLA       + +        Y +PE+L
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
                YG  VD+WA G I +  L+   PF     D  +L +   A     PS        
Sbjct: 179 -RKDPYGKPVDMWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFPS-------- 227
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                      P   ++ P A     DL++KM T +P  RITA +AL+H +  
Sbjct: 228 -----------PEWDTVTPEAK----DLINKMLTINPAKRITASEALKHPWIC 265

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 128/295 (43%), Gaps = 56/295 (18%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPH 72
           Y+  + LG GT+G V       TG  VA+K +   K +   V     REI+ LK  + PH
Sbjct: 18  YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 73  IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           II+L        ++ +V E++      + + +N    L   + +   Q  L G+ +CH+ 
Sbjct: 78  IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRH 135
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAP 180
            V+HRD+KP N+L+ +H   K+ADFGL+ +           GSP+           Y AP
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPN-----------YAAP 184
Query: 181 ELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           E++ G    G  VD+W++G I +A L    PF     D D +  +F             +
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLPF-----DDDHVPTLFKKICDG-------I 232
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
            Y P Y             L PS     + LL  M   DP  R T +   EH +F
Sbjct: 233 FYTPQY-------------LNPS----VISLLKHMLQVDPMKRATIKDIREHEWF 270

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLL 65
           S K +D Y  +E LG+G + VV + +   TG   A K I   K+    +F  L RE ++ 
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARIC 59
Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           ++L+ P+I+ L D+   +   +LVF+ +   E   + V R    F S AD    +Q  L+
Sbjct: 60  RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILE 116
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR-WYR 178
            +A+CH   ++HR++KP NLL+ S  +   +KLADFGLA      D    H       Y 
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 179 APELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           +PE+L     Y   VD+WA G I +  L+   PF     D DQ  +++A           
Sbjct: 175 SPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFW----DEDQ-HRLYAQIKAGA----- 223
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                     Y Y  +P   ++ P A      L+  M T +PK RITA QAL+
Sbjct: 224 ----------YDY-PSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 261

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLL 65
           S K +D Y  +E LG+G + VV + +   TG   A K I   K+    +F  L RE ++ 
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-TKKLSARDFQKLEREARIC 59
Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           ++L+ P+I+ L D+   +   +LVF+ +   E   + V R    F S AD    +Q  L+
Sbjct: 60  RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILE 116
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR-WYR 178
            +A+CH   ++HR++KP NLL+ S  +   +KLADFGLA      D    H       Y 
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 179 APELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           +PE+L     Y   VD+WA G I +  L+   PF     D DQ  +++A           
Sbjct: 175 SPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFW----DEDQ-HRLYAQIKAGA----- 223
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                     Y Y  +P   ++ P A      L+  M T +PK RITA QAL+
Sbjct: 224 ----------YDY-PSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 261

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 33  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 93  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 149
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 150 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 206
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 207 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 246
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 247 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 279

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 76  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 36/293 (12%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + D Y   E LG+G + VV + +   TGQ  A K I   K     +    RE ++ + LK
Sbjct: 2   MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 70  SPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
            P+I+ L D+   +G  +LVF+ +   E   + V R    + S AD    +Q  L+ +  
Sbjct: 62  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILESVNH 118
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           CH   ++HRD+KP NLL+ S  +   +KLADFGLA       + +        Y +PE+L
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
                YG  VD+WA G I +  L+   PF     D  +L +   A     PS        
Sbjct: 179 -RKDPYGKPVDMWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFPS-------- 227
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                      P   ++ P A     DL++KM T +P  RITA +AL+H +  
Sbjct: 228 -----------PEWDTVTPEAK----DLINKMLTINPAKRITASEALKHPWIC 265

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 77  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDL 190
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 230
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 231 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 132/285 (46%), Gaps = 36/285 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E LG+G + VV + +    GQ  A K I   K     +    RE ++ + LK P+I+ L 
Sbjct: 28  EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 78  DAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           D+   +G+ +L+F+ +   E   + V R    + S AD    +Q  L+ +  CH+  V+H
Sbjct: 88  DSISEEGHHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQMGVVH 144
Query: 135 RDMKPNNLLIGSH---GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           RD+KP NLL+ S      +KLADFGLA       + +        Y +PE+L     YG 
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL-RKDPYGK 203
Query: 192 GVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
            VD+WA G I +  L+   PF     D  +L +   A     PS                
Sbjct: 204 PVDLWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFPS---------------- 245
Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
              P   ++ P A     DL++KM T +P  RITA +AL+H + S
Sbjct: 246 ---PEWDTVTPEAK----DLINKMLTINPSKRITAAEALKHPWIS 283

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 34/313 (10%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V D Y   E LG G +GVV++  +  TG   A K +    + +    T  +EI+ +  L+
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR 212
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            P ++ L DAF     + +++EFM   +L   + + +  +S  +   YM+   KGL   H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 129 KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
           +   +H D+KP N++  +    +LKL DFGL      P +          + APE+  G 
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEG- 330
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           K  G   D+W+ G +   LL+      G +D + L  + +         W     + D  
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DWN----MDD-- 377
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKL 306
                      S F   S+D  D + K+   DP  R+T  QALEH + +    P   +++
Sbjct: 378 -----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 426
Query: 307 PRPATKRASKASD 319
           P   + R +K  D
Sbjct: 427 P---SSRYTKIRD 436

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 76  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 76  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 76  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 79  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 41/291 (14%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKE 67
           K +D Y  +E LG+G + VV + +   TG   A K I   K+    +F  L RE ++ ++
Sbjct: 2   KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRK 60
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L+ P+I+ L D+   +   +LVF+ +   E   + V R    F S AD    +Q  L+ +
Sbjct: 61  LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESI 117
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR-WYRAP 180
           A+CH   ++HR++KP NLL+ S  +   +KLADFGLA      D    H       Y +P
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 175
Query: 181 ELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           E+L     Y   VD+WA G I +  L+   PF     D DQ  +++A             
Sbjct: 176 EVL-KKDPYSKPVDIWACGVILYILLVGYPPFW----DEDQ-HRLYAQIKAGA------- 222
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                   Y Y  +P   ++ P A      L+  M T +PK RITA QAL+
Sbjct: 223 --------YDY-PSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 260

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 81  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDL 194
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 234
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 235 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 147/311 (47%), Gaps = 39/311 (12%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           K E+LG G +G V+K  +T TG  +A K  K R  K KE V      EI ++ +L   ++
Sbjct: 93  KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK----NEISVMNQLDHANL 148
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I+L DAF  K ++ LV E+++  +L   I + +  L+  D   +M+   +G+   H+ ++
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI 208
Query: 133 LHRDMKPNNLLIGSHG--QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
           LH D+KP N+L  +    Q+K+ DFGLAR +  P  +         + APE++       
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRY-KPREKLKVNFGTPEFLAPEVV-NYDFVS 266
Query: 191 AGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              D+W+ G I   LL+   PFL G +D + L  I A        ++ D+          
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILACRWDLEDEEFQDI---------- 315
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
                         S++A + +SK+   +   RI+A +AL+H + S   L +  +   + 
Sbjct: 316 --------------SEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLS--AQK 359
Query: 310 ATKRASKASDF 320
              R S A DF
Sbjct: 360 KKNRGSDAQDF 370

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 81  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 194
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 234
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 235 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 76  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 34/313 (10%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V D Y   E LG G +GVV++  +  TG   A K +    + +    T  +EI+ +  L+
Sbjct: 49  VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR 106
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            P ++ L DAF     + +++EFM   +L   + + +  +S  +   YM+   KGL   H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 129 KKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
           +   +H D+KP N++  +    +LKL DFGL      P +          + APE+  G 
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEG- 224
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           K  G   D+W+ G +   LL+      G +D + L  + +         W     + D  
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DWN----MDD-- 271
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKL 306
                      S F   S+D  D + K+   DP  R+T  QALEH + +    P   +++
Sbjct: 272 -----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 320
Query: 307 PRPATKRASKASD 319
           P   + R +K  D
Sbjct: 321 P---SSRYTKIRD 330

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 102 YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 158
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 159 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDL 215
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 255
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 256 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 15  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 75  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 131
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 132 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 188
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 189 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 228
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 229 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 261

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 20  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 80  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 137 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 193
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 194 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 233
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 234 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 266

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 79  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 77  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEG-RMHDEKVDL 190
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 230
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 231 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A +  +   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 16  LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 76  YFHDSTRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKKVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  D   +I     T            PD+V         
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 34/293 (11%)
Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTAL 59
           +AE+   K   D +     LG+G +G VY A + +    +A+K +   + +KEGV     
Sbjct: 4   LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 63
Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQ 118
           REI++   L+ P+I+ + + F  +  ++L+ EF    +L   ++    F       ++M+
Sbjct: 64  REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFME 122
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
                L +CH++ V+HRD+KP NLL+G  G+LK+ADFG +    +P  R         Y 
Sbjct: 123 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYL 180
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
            PE++ G K +   VD+W AG +  E L   P     S  +   +I             D
Sbjct: 181 PPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV----------D 229
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
           L +            PP        SD + DL+SK+  Y P  R+  +  +EH
Sbjct: 230 LKF------------PPF------LSDGSKDLISKLLRYHPPQRLPLKGVMEH 264

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y     +G G++G V  A+   T    A KKI     ++   F   +EI+++K L  P+I
Sbjct: 11  YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSLDHPNI 68
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L + F    +++LV E     +L   + +  +F   +D    M+  L  +A+CHK  V
Sbjct: 69  IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVF-RESDAARIMKDVLSAVAYCHKLNV 127
Query: 133 LHRDMKPNNLLI---GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            HRD+KP N L         LKL DFGLA  F  P +    +V   +Y +P++L G   Y
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMRTKVGTPYYVSPQVLEGL--Y 184
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
           G   D W+AG +   LL   P     +D + + KI     T     W ++          
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV---------- 234
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF----SSAP 298
                         S  A  L+ ++ T  PK RIT+ QALEH +F    SS+P
Sbjct: 235 --------------SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 31/279 (11%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           +LG+G++  VY+A    TG  VAIK I +    K G+      E+K+  +LK P I+EL 
Sbjct: 18  LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
           + F     ++LV E     ++   ++N     S  + + +M   + G+ + H   +LHRD
Sbjct: 78  NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRD 137
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +  +NLL+  +  +K+ADFGLA     P  +         Y +PE+      +G   DVW
Sbjct: 138 LTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA-TRSAHGLESDVW 196
Query: 197 AAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL 256
           + GC+F  LL  RP                 F T T     +   L DY        P  
Sbjct: 197 SLGCMFYTLLIGRP----------------PFDTDTVKNTLNKVVLADY------EMPSF 234
Query: 257 RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            S+      +A DL+ ++   +P  R++    L+H + S
Sbjct: 235 LSI------EAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 81  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE + G + +   VD+
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEG-RXHDEKVDL 194
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 234
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 235 --------TEGARDLISRLLKHNPSQRPXLREVLEHPWITA 267

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 34/293 (11%)
Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTAL 59
           +AE+   K   D +     LG+G +G VY A + +    +A+K +   + +KEGV     
Sbjct: 3   LAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQ 118
           REI++   L+ P+I+ + + F  +  ++L+ EF    +L   ++    F       ++M+
Sbjct: 63  REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFME 121
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
                L +CH++ V+HRD+KP NLL+G  G+LK+ADFG +    +P  R         Y 
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYL 179
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
            PE++ G K +   VD+W AG +  E L   P     S  +   +I             D
Sbjct: 180 PPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV----------D 228
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
           L +            PP        SD + DL+SK+  Y P  R+  +  +EH
Sbjct: 229 LKF------------PPF------LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 78  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 134
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+A+FG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 135 DIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 191
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 231
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 232 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           Y     +G G++G V  A+   T    A KKI     ++   F   +EI+++K L  P+I
Sbjct: 28  YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSLDHPNI 85
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L + F    +++LV E     +L   + +  +F   +D    M+  L  +A+CHK  V
Sbjct: 86  IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVF-RESDAARIMKDVLSAVAYCHKLNV 144
Query: 133 LHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            HRD+KP N L  +      LKL DFGLA  F  P +    +V   +Y +P++L G   Y
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMRTKVGTPYYVSPQVLEGL--Y 201
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
           G   D W+AG +   LL   P     +D + + KI     T     W ++          
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV---------- 251
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF----SSAP 298
                         S  A  L+ ++ T  PK RIT+ QALEH +F    SS+P
Sbjct: 252 --------------SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 290

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 79  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+A+FG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 136 DIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 78  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 134
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 135 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDL 191
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 231
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 232 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + +    +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 13  LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 73  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 129
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 130 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 186
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 187 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 226
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 227 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 259

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 76  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 79  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 77  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDL 190
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 230
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 231 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 76  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDL 189
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 229
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 230 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 79  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 79  YFHDATRVYLILEY--APLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDL 192
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L  +P  + ++  +   +I     T            PD+V         
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV--------- 232
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                   ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 233 --------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 138/302 (45%), Gaps = 37/302 (12%)
Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           MA +  ++   + Y   E LG+G + VV + +    GQ  A   I   K     +    R
Sbjct: 1   MATITCTR-FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER 59
Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYM 117
           E ++ + LK P+I+ L D+   +G+ +L+F+ +   E   + V R    + S AD    +
Sbjct: 60  EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE---YYSEADASHCI 116
Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGSPDRRFTHQVFA 174
           Q  L+ +  CH+  V+HR++KP NLL+ S      +KLADFGLA       + +      
Sbjct: 117 QQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT 176
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
             Y +PE+L     YG  VD+WA G I +  L+   PF     D  +L +   A     P
Sbjct: 177 PGYLSPEVL-RKDPYGKPVDLWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFP 233
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
           S                   P   ++ P A     DL++KM T +P  RITA +AL+H +
Sbjct: 234 S-------------------PEWDTVTPEAK----DLINKMLTINPSKRITAAEALKHPW 270
Query: 294 FS 295
            S
Sbjct: 271 IS 272

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 38/276 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD---IKSYMQMTLKGLAFCHKKWVLHR 135
            F     ++L+ E+    L TV R     LS  D     +Y+      L++CH K V+HR
Sbjct: 80  YFHDATRVYLILEY--APLGTVYRELQK-LSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP NLL+GS+G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+
Sbjct: 137 DIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 193
Query: 196 WAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           W+ G +  E L   P  +  +  +   +I     T            PD+V         
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-----------FPDFV--------- 233
Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                   ++ A DL+S++  ++   R+T  + LEH
Sbjct: 234 --------TEGARDLISRLLKHNASQRLTLAEVLEH 261

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y++ + +GEG++G       T+ G+   IK+I + +        + RE+ +L  +K P
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCH 128
           +I++  ++F   G+L++V ++ E  DL   I      L   D  +  ++Q+ L  L   H
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL-ALKHVH 142
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
            + +LHRD+K  N+ +   G ++L DFG+AR+  S        +   +Y +PE+    K 
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC-ENKP 201
Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
           Y    D+WA GC+  EL   +   +  S  + + KI +             ++ P  + Y
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG------------SFPPVSLHY 249
Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            Y               D   L+S++F  +P+ R +    LE  + +
Sbjct: 250 SY---------------DLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 34/279 (12%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79  AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
            F     ++L+ E+    ++   ++  + F       +Y+      L++CH K V+HRD+
Sbjct: 81  YFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
           KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + +   VD+W+
Sbjct: 140 KPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWS 196
Query: 198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257
            G +  E L  +P  + ++  +   +I     T            PD+V           
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV----------- 234
Query: 258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                 ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 235 ------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 40/297 (13%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
           + D ++ +  LG G +G V+   +  +G    IK I   K +  V    +  EI++LK L
Sbjct: 20  IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTI--NKDRSQVPMEQIEAEIEVLKSL 77
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMETD--LETVI--RNTNIFLSPADIKSYMQMTLKGL 124
             P+II++ + F    N+++V E  E    LE ++  +     LS   +   M+  +  L
Sbjct: 78  DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137
Query: 125 AFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
           A+ H + V+H+D+KP N+L      H  +K+ DFGLA +F S D   T+      Y APE
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-DEHSTNAAGTALYMAPE 196
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           +    +      D+W+AG +   LL    PF                    T +   ++ 
Sbjct: 197 VF--KRDVTFKCDIWSAGVVMYFLLTGCLPF--------------------TGTSLEEVQ 234
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
               Y E  Y  A   R L P A    +DLL +M T DP+ R +A Q L H +F  A
Sbjct: 235 QKATYKEPNY--AVECRPLTPQA----VDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 49/308 (15%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELK 69
           +D Y+ +E +G G+Y    + +   T    A+K I   K+          EI+ LL+  +
Sbjct: 26  SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS------EEIEILLRYGQ 79
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
            P+II L D +    +++LV E M     L+ ++R    F S  +    +    K + + 
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYL 137
Query: 128 HKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           H + V+HRD+KP+N+L     G+   L++ DFG A+   + +       +   + APE+L
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQ--LGKIFAAFGTATPSQWPDLA 240
              + Y  G D+W+ G +   +L    PF  G SD  +  L +I +   T +   W    
Sbjct: 198 -KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN--- 253
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                                + S+ A DL+SKM   DP  R+TA+Q L+H      P  
Sbjct: 254 ---------------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQH------PWV 286
Query: 301 TEPNKLPR 308
           T+ +KLP+
Sbjct: 287 TQKDKLPQ 294

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 133/289 (46%), Gaps = 36/289 (12%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + D Y   E +G+G + VV + +   TG   A K I   K     +    RE ++ + LK
Sbjct: 2   MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 70  SPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
             +I+ L D+   +G  +LVF+ +   E   + V R    + S AD    +Q  L+ +  
Sbjct: 62  HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLH 118
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           CH+  V+HRD+KP NLL+ S  +   +KLADFGLA       + +        Y +PE+L
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
              + YG  VD+WA G I +  L+   PF     D  +L +   A     PS        
Sbjct: 179 -RKEAYGKPVDIWACGVILYILLVGYPPFW--DEDQHKLYQQIKAGAYDFPS-------- 227
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                      P   ++ P A     +L+++M T +P  RITA +AL+H
Sbjct: 228 -----------PEWDTVTPEAK----NLINQMLTINPAKRITAHEALKH 261

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 49/308 (15%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELK 69
           +D Y+ +E +G G+Y    + +   T    A+K I   K+          EI+ LL+  +
Sbjct: 26  SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS------EEIEILLRYGQ 79
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
            P+II L D +    +++LV E M     L+ ++R    F S  +    +    K + + 
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYL 137
Query: 128 HKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           H + V+HRD+KP+N+L     G+   L++ DFG A+   + +       +   + APE+L
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 184 FGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQ--LGKIFAAFGTATPSQWPDLA 240
              + Y  G D+W+ G +   +L    PF  G SD  +  L +I +   T +   W    
Sbjct: 198 -KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN--- 253
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                                + S+ A DL+SKM   DP  R+TA+Q L+H      P  
Sbjct: 254 ---------------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQH------PWV 286
Query: 301 TEPNKLPR 308
           T+ +KLP+
Sbjct: 287 TQKDKLPQ 294

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 36/275 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIF--LSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
            F     ++L+ E+    L TV R              +Y+      L++CH K V+HRD
Sbjct: 80  YFHDATRVYLILEY--APLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +KP NLL+GS+G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+W
Sbjct: 138 IKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDLW 194
Query: 197 AAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL 256
           + G +  E L   P  +  +  +   +I     T            PD+V          
Sbjct: 195 SLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-----------FPDFV---------- 233
Query: 257 RSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                  ++ A DL+S++  ++   R+T  + LEH
Sbjct: 234 -------TEGARDLISRLLKHNASQRLTLAEVLEH 261

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           ++ + D Y  R+VLG G +  V  A D +T + VAIK I   K  EG   +   EI +L 
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLH 71
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
           ++K P+I+ L D +   G+L+L+ + +      + ++     F +  D    +   L  +
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAV 129
Query: 125 AFCHKKWVLHRDMKPNNLL---IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            + H   ++HRD+KP NLL   +    ++ ++DFGL+++   P    +       Y APE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPE 188
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +L   K Y   VD W+ G I   LL   P     +D     +I  A        W D+  
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-- 245
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                                 SD A D +  +   DP+ R T +QAL+H + +
Sbjct: 246 ----------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 34/279 (12%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + ++   +A+K + +   +K GV     RE+++   L+ P+I+ L  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 79  AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
            F     ++L+ E+    ++   ++  + F       +Y+      L++CH K V+HRD+
Sbjct: 81  YFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
           KP NLL+GS G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+W+
Sbjct: 140 KPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEG-RMHDEKVDLWS 196
Query: 198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257
            G +  E L  +P  + ++  +   +I     T            PD+V           
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV----------- 234
Query: 258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                 ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 235 ------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIELID 78
           +G G++G VY A D +  + VAIKK+   GKQ        ++E++ L++L+ P+ I+   
Sbjct: 62  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
            +  +    LV E+       ++      L   +I +     L+GLA+ H   ++HRD+K
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 181
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGVDVW 196
             N+L+   G +KL DFG A I  +P   F   V   ++ APE++      QY   VDVW
Sbjct: 182 AGNILLSEPGLVKLGDFGSASIM-APANXF---VGTPYWMAPEVILAMDEGQYDGKVDVW 237
Query: 197 AAGCIFAELLNRRP 210
           + G    EL  R+P
Sbjct: 238 SLGITCIELAERKP 251

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLKELKSPHIIELID 78
           +G G++G VY A D +  + VAIKK+   GKQ        ++E++ L++L+ P+ I+   
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
            +  +    LV E+       ++      L   +I +     L+GLA+ H   ++HRD+K
Sbjct: 83  CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 142
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGVDVW 196
             N+L+   G +KL DFG A I  +P   F   V   ++ APE++      QY   VDVW
Sbjct: 143 AGNILLSEPGLVKLGDFGSASIM-APANXF---VGTPYWMAPEVILAMDEGQYDGKVDVW 198
Query: 197 AAGCIFAELLNRRP 210
           + G    EL  R+P
Sbjct: 199 SLGITCIELAERKP 212

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V D Y   E LG G +GVV++ ++  TG+    K I      +   +T   EI ++ +L 
Sbjct: 49  VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLH 106
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            P +I L DAF  K  + L+ EF+   +L   I   +  +S A++ +YM+   +GL   H
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 129 KKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
           +  ++H D+KP N++  +     +K+ DFGLA    +PD           + APE++   
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL-NPDEIVKVTTATAEFAAPEIV-DR 224
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           +  G   D+WA G +   LL+      G  D++ L  +           W          
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV-------KRCDW---------- 267
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
           E+   A       F S S +A D +  +   +P+ R+T   ALEH
Sbjct: 268 EFDEDA-------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 56/306 (18%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIKLL 65
           V D Y   E LG G + +V K     TG+  A   IKK RL   + GV+   + RE+ +L
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           +E++ P+II L D F +K ++ L+ E +              L+  +   +++  L G+ 
Sbjct: 63  REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 126 FCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFTHQ 171
           + H K + H D+KP N+++        ++KL DFG+A           IFG+P+      
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE------ 176
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230
                + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I A    
Sbjct: 177 -----FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISA---- 225
Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                          V Y +         F + S+ A D + ++   DPK R+T  Q+LE
Sbjct: 226 ---------------VNYDFD-----EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265
Query: 291 HRYFSS 296
           H +  +
Sbjct: 266 HSWIKA 271

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           ++ + D Y  R+VLG G +  V  A D +T + VAIK I   +  EG   +   EI +L 
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLH 71
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
           ++K P+I+ L D +   G+L+L+ + +      + ++     F +  D    +   L  +
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAV 129
Query: 125 AFCHKKWVLHRDMKPNNLL---IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            + H   ++HRD+KP NLL   +    ++ ++DFGL+++   P    +       Y APE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPE 188
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +L   K Y   VD W+ G I   LL   P     +D     +I  A        W D+  
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-- 245
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                                 SD A D +  +   DP+ R T +QAL+H + +
Sbjct: 246 ----------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 141/293 (48%), Gaps = 40/293 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D Y+K   +GEG+ G+V  A +  +G+ VA+K + L KQ+         E+ ++++ +  
Sbjct: 48  DSYVK---IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHF 102
Query: 72  HIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +++E+  ++     L ++ EF++    TD+ + +R     L+   I +  +  L+ LA+ 
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYL 157
Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H + V+HRD+K +++L+   G++KL+DFG          +    V   ++ APE++    
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI-SRS 216
Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
            Y   VD+W+ G +  E+++  P     S +  + ++       +P         P  ++
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-----RDSP---------PPKLK 262
Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
             +  +P LR           D L +M   DP+ R TAQ+ L+H +     LP
Sbjct: 263 NSHKVSPVLR-----------DFLERMLVRDPQERATAQELLDHPFLLQTGLP 304

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           ++ + D Y  R+VLG G +  V  A D +T + VAIK I   +  EG   +   EI +L 
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLH 71
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
           ++K P+I+ L D +   G+L+L+ + +      + ++     F +  D    +   L  +
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAV 129
Query: 125 AFCHKKWVLHRDMKPNNLL---IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            + H   ++HRD+KP NLL   +    ++ ++DFGL+++   P    +       Y APE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPE 188
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +L   K Y   VD W+ G I   LL   P     +D     +I  A        W D+  
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-- 245
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                                 SD A D +  +   DP+ R T +QAL+H + +
Sbjct: 246 ----------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           ++ + D Y  R+VLG G +  V  A D +T + VAIK I   +  EG   +   EI +L 
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLH 71
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
           ++K P+I+ L D +   G+L+L+ + +      + ++     F +  D    +   L  +
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAV 129
Query: 125 AFCHKKWVLHRDMKPNNLL---IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            + H   ++HRD+KP NLL   +    ++ ++DFGL+++   P    +       Y APE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPE 188
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +L   K Y   VD W+ G I   LL   P     +D     +I  A        W D+  
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-- 245
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                                 SD A D +  +   DP+ R T +QAL+H + +
Sbjct: 246 ----------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 44/311 (14%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLLK 66
           K+  +YL  ++LGEG+YG V + +D++T    A+K ++  K +   N  A   +EI+LL+
Sbjct: 2   KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61
Query: 67  ELKSPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTNIFLSP-ADIKSYMQMTLKG 123
            L+  ++I+L+D      K  +++V E+    ++ ++ +      P      Y    + G
Sbjct: 62  RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI---FGSPDRRFTHQVFARWYRAP 180
           L + H + ++H+D+KP NLL+ + G LK++  G+A     F + D   T Q  +  ++ P
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ-GSPAFQPP 180
Query: 181 ELLFGAKQY-GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           E+  G   + G  VD+W+AG     +       +G    D + K+F   G  + +   D 
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIGKGSYAIPGD- 235
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF----- 294
                         PPL            DLL  M  Y+P  R + +Q  +H +F     
Sbjct: 236 ------------CGPPLS-----------DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272
Query: 295 -SSAPLPTEPN 304
            + AP+P  P+
Sbjct: 273 PAEAPVPIPPS 283

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G +G VYKA + +TG   A K I    ++E  ++    EI++L     P+I++L+ A
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV--EIEILATCDHPYIVKLLGA 84
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           + H G L ++ EF     ++ ++   +  L+   I+   +  L+ L F H K ++HRD+K
Sbjct: 85  YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
Query: 139 PNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ----YGAGV 193
             N+L+   G ++LADFG+ A+   +  +R +  +   ++ APE++         Y    
Sbjct: 145 AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYV 251
           D+W+ G    E+    P     + +  L KI  +      TPS+W         VE++  
Sbjct: 204 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS--------VEFR-- 253
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                            D L      +P+ R +A Q LEH + SS
Sbjct: 254 -----------------DFLKIALDKNPETRPSAAQLLEHPFVSS 281

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G +G VYKA + +TG   A K I    ++E  ++    EI++L     P+I++L+ A
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV--EIEILATCDHPYIVKLLGA 76
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           + H G L ++ EF     ++ ++   +  L+   I+   +  L+ L F H K ++HRD+K
Sbjct: 77  YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 136
Query: 139 PNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAKQ----YGAGV 193
             N+L+   G ++LADFG+ A+   +  +R +  +   ++ APE++         Y    
Sbjct: 137 AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYV 251
           D+W+ G    E+    P     + +  L KI  +      TPS+W         VE++  
Sbjct: 196 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS--------VEFR-- 245
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                            D L      +P+ R +A Q LEH + SS
Sbjct: 246 -----------------DFLKIALDKNPETRPSAAQLLEHPFVSS 273

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 56/306 (18%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIKLL 65
           V D Y   E LG G + +V K     TG+  A   IKK RL   + GV+   + RE+ +L
Sbjct: 10  VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           +E++ P+II L D F +K ++ L+ E +              L+  +   +++  L G+ 
Sbjct: 70  REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 129
Query: 126 FCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFTHQ 171
           + H K + H D+KP N+++        ++KL DFG+A           IFG+P+      
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE------ 183
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230
                + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I A    
Sbjct: 184 -----FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISA---- 232
Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                          V Y +         F + S+ A D + ++   DPK R+   Q+LE
Sbjct: 233 ---------------VNYDFD-----EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 272
Query: 291 HRYFSS 296
           H +  +
Sbjct: 273 HSWIKA 278

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 141/313 (45%), Gaps = 57/313 (18%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK---------------------- 49
           ++Y  ++ +G+G+YGVV  A +       A+K +   K                      
Sbjct: 13  NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 50  --QKEGVNFTALREIKLLKELKSPHIIELIDAF--PHKGNLHLVFEFMETDLETVIRNTN 105
             Q  G      +EI +LK+L  P++++L++    P++ +L++VFE +       +    
Sbjct: 73  CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 106 IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165
             LS    + Y Q  +KG+ + H + ++HRD+KP+NLL+G  G +K+ADFG++  F   D
Sbjct: 133 P-LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 166 RRFTHQVFARWYRAPELLFGAKQY--GAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLG 222
              ++ V    + APE L   ++   G  +DVWA G  ++  +  + PF+      D+  
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM------DERI 245
Query: 223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282
               +   +   ++PD                      P  ++D  DL+++M   +P++R
Sbjct: 246 MCLHSKIKSQALEFPDQ---------------------PDIAEDLKDLITRMLDKNPESR 284
Query: 283 ITAQQALEHRYFS 295
           I   +   H + +
Sbjct: 285 IVVPEIKLHPWVT 297

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 56/306 (18%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIKLL 65
           V D Y   E LG G + +V K     TG+  A   IKK RL   + GV+   + RE+ +L
Sbjct: 24  VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           +E++ P+II L D F +K ++ L+ E +              L+  +   +++  L G+ 
Sbjct: 84  REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 126 FCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFTHQ 171
           + H K + H D+KP N+++        ++KL DFG+A           IFG+P+      
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE------ 197
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230
                + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I A    
Sbjct: 198 -----FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISA---- 246
Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                          V Y +         F + S+ A D + ++   DPK R+   Q+LE
Sbjct: 247 ---------------VNYDFD-----EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 286
Query: 291 HRYFSS 296
           H +  +
Sbjct: 287 HSWIKA 292

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 32/286 (11%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A    +G+ VA+KK+ L KQ+         E+ ++++ +  
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 208
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +++E+ +++     L +V EF+E    T I  T+  ++   I +     L+ L+  H + 
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           V+HRD+K +++L+   G++KL+DFG          R    V   ++ APEL+     YG 
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 326
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            VD+W+ G +  E+++  P       +  +  I                 LP  ++  + 
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR--------------DNLPPRLKNLHK 372
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
            +P L+             L ++   DP  R TA + L+H + + A
Sbjct: 373 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKA 407

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-------GKQKEGVNFTALREIKL 64
           + Y  +E+LG G   VV + I   T +  A+K I +        ++ + +    L+E+ +
Sbjct: 17  ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 65  LKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           L+++   P+II+L D +       LVF+ M+           + LS  + +  M+  L+ 
Sbjct: 77  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           +   HK  ++HRD+KP N+L+     +KL DFG +     P  +         Y APE++
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEII 195
Query: 184 FGAKQ-----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
             +       YG  VD+W+ G I   LL   P       +  L  I +        +W D
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                                    SD   DL+S+     P+ R TA++AL H +F
Sbjct: 256 Y------------------------SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-------GKQKEGVNFTALREIKL 64
           + Y  +E+LG G   VV + I   T +  A+K I +        ++ + +    L+E+ +
Sbjct: 17  ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 65  LKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           L+++   P+II+L D +       LVF+ M+           + LS  + +  M+  L+ 
Sbjct: 77  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           +   HK  ++HRD+KP N+L+     +KL DFG +     P  +         Y APE++
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRSVCGTPSYLAPEII 195
Query: 184 FGAKQ-----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
             +       YG  VD+W+ G I   LL   P       +  L  I +        +W D
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                                    SD   DL+S+     P+ R TA++AL H +F
Sbjct: 256 Y------------------------SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-------GKQKEGVNFTALREIKL 64
           + Y  +E+LG G   VV + I   T +  A+K I +        ++ + +    L+E+ +
Sbjct: 4   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 65  LKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           L+++   P+II+L D +       LVF+ M+           + LS  + +  M+  L+ 
Sbjct: 64  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           +   HK  ++HRD+KP N+L+     +KL DFG +     P  +         Y APE++
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEII 182
Query: 184 FGAKQ-----YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
             +       YG  VD+W+ G I   LL   P       +  L  I +        +W D
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 242
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                                    SD   DL+S+     P+ R TA++AL H +F
Sbjct: 243 Y------------------------SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G+YG   K      G+ +  K++  G   E      + E+ LL+ELK P+I+   D 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 80  FPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPAD----IKSYMQMTLKGLAFCHKK-- 130
              + N  L++V E+ E  DL +VI          D    ++   Q+TL  L  CH++  
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSD 132
Query: 131 ---WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
               VLHRD+KP N+ +     +KL DFGLARI    +      V   +Y +PE +    
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM-NRM 191
Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
            Y    D+W+ GC+  EL    P     S  +  GKI        P ++ D
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD 242

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 136/315 (43%), Gaps = 53/315 (16%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G   +VY+     T +  A+K ++    K+ V      EI +L  L  P+II+L + 
Sbjct: 61  LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR----TEIGVLLRLSHPNIIKLKEI 116
Query: 80  FPHKGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F     + LV E + T  E   R     + S  D    ++  L+ +A+ H+  ++HRD+K
Sbjct: 117 FETPTEISLVLELV-TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 139 PNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFAR------WYRAPELLFGAKQY 189
           P NLL  +      LK+ADFGL++I         HQV  +       Y APE+L G   Y
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKI-------VEHQVLMKTVCGTPGYCAPEILRGC-AY 227
Query: 190 GAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
           G  VD+W+ G I +  L    PF     D     +I                      EY
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-------------------EY 268
Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS-----APLPTEP 303
            +++       +   S +A DL+ K+   DPK R+T  QAL+H + +        + T  
Sbjct: 269 YFIS-----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQ 323
Query: 304 NKLPRPATKRASKAS 318
            KL     +R  KA+
Sbjct: 324 KKLQEFNARRKLKAA 338

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 130/304 (42%), Gaps = 72/304 (23%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIR----LGKQKEGVNFTALREIK 63
            Y+  + LG GT+G V       TG  VA+K     KIR    +GK K        REI+
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--------REIQ 63
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTL 121
            LK  + PHII+L        +  +V E++      + + ++  +     + +   Q  L
Sbjct: 64  NLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQIL 121
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQ 171
             + +CH+  V+HRD+KP N+L+ +H   K+ADFGL+ +           GSP+      
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN------ 175
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGT 230
                Y APE++ G    G  VD+W+ G I +A L    PF     D + +  +F     
Sbjct: 176 -----YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-----DDEHVPTLFKKIRG 225
Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                   + Y+P+Y+          RS+          LL  M   DP  R T +   E
Sbjct: 226 G-------VFYIPEYLN---------RSV--------ATLLMHMLQVDPLKRATIKDIRE 261
Query: 291 HRYF 294
           H +F
Sbjct: 262 HEWF 265

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 56/296 (18%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSP 71
            Y+  + LG GT+G V       TG  VA+K +   K +   V     REI+ LK  + P
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           HII+L        +  +V E++      + + ++  +     + +   Q  L  + +CH+
Sbjct: 72  HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQILSAVDYCHR 129
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRA 179
             V+HRD+KP N+L+ +H   K+ADFGL+ +           GSP+           Y A
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPN-----------YAA 178
Query: 180 PELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           PE++ G    G  VD+W+ G I +A L    PF     D + +  +F             
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-----DDEHVPTLFKKIRGG------- 226
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           + Y+P+Y+          RS+          LL  M   DP  R T +   EH +F
Sbjct: 227 VFYIPEYLN---------RSV--------ATLLMHMLQVDPLKRATIKDIREHEWF 265

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 25  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 83
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 84  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 141
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 197
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            Y    D+W+ G    E+ + R P   GS  +     IF                L DY+
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSM----AIFE---------------LLDYI 238
Query: 247 EYQYVAAPPLRSLFPSA--SDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               V  PP +   PS   S +  D ++K    +P  R   +Q + H + 
Sbjct: 239 ----VNEPPPK--LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 282

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 130/290 (44%), Gaps = 36/290 (12%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +  D Y   E LG+G + VV + +     Q  A K I   K     +    RE ++ + L
Sbjct: 28  RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM---ETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           K P+I+ L D+   +G  +LVF+ +   E   + V R    + S AD    +   L+ + 
Sbjct: 88  KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIHQILESVN 144
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
             H+  ++HRD+KP NLL+ S  +   +KLADFGLA       + +        Y +PE+
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 183 LFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L     YG  VD+WA G I +  L+   PF     D  +L +   A     PS       
Sbjct: 205 L-RKDPYGKPVDIWACGVILYILLVGYPPFW--DEDQHKLYQQIKAGAYDFPS------- 254
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                       P   ++ P A     +L+++M T +P  RITA QAL+H
Sbjct: 255 ------------PEWDTVTPEAK----NLINQMLTINPAKRITADQALKH 288

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 133/282 (47%), Gaps = 29/282 (10%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +GEG+ G+V  A +  TG+ VA+KK+ L KQ+         E+ ++++    +++++  +
Sbjct: 53  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--RELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 80  FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKP 139
           +     L +V EF+E    T I  T+  ++   I +     L+ L++ H + V+HRD+K 
Sbjct: 111 YLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 140 NNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAG 199
           +++L+ S G++KL+DFG          +    V   ++ APE++     YG  VD+W+ G
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI-SRLPYGTEVDIWSLG 228
Query: 200 CIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSL 259
            +  E+++  P       +  + +I  +              LP  V+  +  +  LR  
Sbjct: 229 IMVIEMIDGEPPYFNEPPLQAMRRIRDS--------------LPPRVKDLHKVSSVLRGF 274
Query: 260 FPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
                   LDL   M   +P  R TAQ+ L H +   A  P+
Sbjct: 275 --------LDL---MLVREPSQRATAQELLGHPFLKLAGPPS 305

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 32/290 (11%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A    +G+ VA+KK+ L KQ+         E+ ++++ +  
Sbjct: 77  DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 131
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +++E+ +++     L +V EF+E    T I  T+  ++   I +     L+ L+  H + 
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           V+HRD+K +++L+   G++KL+DFG          R    V   ++ APEL+     YG 
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 249
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            VD+W+ G +  E+++  P       +  +  I                 LP  ++  + 
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 295
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
            +P L+             L ++   DP  R TA + L+H + + A  P 
Sbjct: 296 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPA 334

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G +G VYKA + +T    A K I    ++E  ++  + EI +L     P+I++L+DA
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDA 102
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F ++ NL ++ EF     ++ V+      L+ + I+   + TL  L + H   ++HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA----KQYGAGVD 194
             N+L    G +KLADFG++       +R    +   ++ APE++       + Y    D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYVA 252
           VW+ G    E+    P     + +  L KI  +     A PS+W                
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---------------- 266
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                      S +  D L K    +  AR T  Q L+H + +
Sbjct: 267 -----------SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 68  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 126
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 184
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 240
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
            Y    D+W+ G    E+ + R P 
Sbjct: 241 HYSVQSDIWSMGLSLVEMAVGRYPI 265

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G +G VYKA + +T    A K I    ++E  ++  + EI +L     P+I++L+DA
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDA 102
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F ++ NL ++ EF     ++ V+      L+ + I+   + TL  L + H   ++HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA----KQYGAGVD 194
             N+L    G +KLADFG++       +R    +   ++ APE++       + Y    D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYVA 252
           VW+ G    E+    P     + +  L KI  +     A PS+W                
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---------------- 266
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                      S +  D L K    +  AR T  Q L+H + +
Sbjct: 267 -----------SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G+YG   K      G+ +  K++  G   E      + E+ LL+ELK P+I+   D 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 80  FPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPAD----IKSYMQMTLKGLAFCHKK-- 130
              + N  L++V E+ E  DL +VI          D    ++   Q+TL  L  CH++  
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSD 132
Query: 131 ---WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
               VLHRD+KP N+ +     +KL DFGLARI           V   +Y +PE +    
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM-NRM 191
Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
            Y    D+W+ GC+  EL    P     S  +  GKI        P ++ D
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD 242

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G+YG   K      G+ +  K++  G   E      + E+ LL+ELK P+I+   D 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 80  FPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPAD----IKSYMQMTLKGLAFCHKK-- 130
              + N  L++V E+ E  DL +VI          D    ++   Q+TL  L  CH++  
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL-ALKECHRRSD 132
Query: 131 ---WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
               VLHRD+KP N+ +     +KL DFGLARI           V   +Y +PE +    
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-NRM 191
Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
            Y    D+W+ GC+  EL    P     S  +  GKI        P ++ D
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD 242

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 32/286 (11%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A    +G+ VA+KK+ L KQ+         E+ ++++ +  
Sbjct: 32  DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 86
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +++E+ +++     L +V EF+E    T I  T+  ++   I +     L+ L+  H + 
Sbjct: 87  NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           V+HRD+K +++L+   G++KL+DFG          R    V   ++ APEL+     YG 
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 204
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            VD+W+ G +  E+++  P       +  +  I                 LP  ++  + 
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 250
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
            +P L+             L ++   DP  R TA + L+H + + A
Sbjct: 251 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKA 285

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 32/286 (11%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A    +G+ VA+KK+ L KQ+         E+ ++++ +  
Sbjct: 34  DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 88
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +++E+ +++     L +V EF+E    T I  T+  ++   I +     L+ L+  H + 
Sbjct: 89  NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           V+HRD+K +++L+   G++KL+DFG          R    V   ++ APEL+     YG 
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 206
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            VD+W+ G +  E+++  P       +  +  I                 LP  ++  + 
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 252
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
            +P L+             L ++   DP  R TA + L+H + + A
Sbjct: 253 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKA 287

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG+G +G VYKA + +T    A K I    ++E  ++  + EI +L     P+I++L+DA
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDA 102
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           F ++ NL ++ EF     ++ V+      L+ + I+   + TL  L + H   ++HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA----KQYGAGVD 194
             N+L    G +KLADFG++       +R    +   ++ APE++       + Y    D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF--GTATPSQWPDLAYLPDYVEYQYVA 252
           VW+ G    E+    P     + +  L KI  +     A PS+W                
Sbjct: 223 VWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---------------- 266
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                      S +  D L K    +  AR T  Q L+H + +
Sbjct: 267 -----------SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + +   LG G  GVV K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 16  DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 74
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P +I   + +  L+GLA+  +
Sbjct: 75  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRI--PEEILGKVSIAVLRGLAYLRE 132
Query: 130 K-WVLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y APE L G  
Sbjct: 133 KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMAPERLQGT- 188
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
            Y    D+W+ G    EL + R P 
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYPI 213

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 32/286 (11%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A    +G+ VA+KK+ L KQ+         E+ ++++ +  
Sbjct: 23  DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 77
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +++E+ +++     L +V EF+E    T I  T+  ++   I +     L+ L+  H + 
Sbjct: 78  NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           V+HRD+K +++L+   G++KL+DFG          R    V   ++ APEL+     YG 
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 195
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            VD+W+ G +  E+++  P       +  +  I                 LP  ++  + 
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 241
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
            +P L+             L ++   DP  R TA + L+H + + A
Sbjct: 242 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKA 276

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D ++K   +GEG+ G+V  A    +G+ VA+KK+ L KQ+         E+ ++++ +  
Sbjct: 27  DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHE 81
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +++E+ +++     L +V EF+E    T I  T+  ++   I +     L+ L+  H + 
Sbjct: 82  NVVEMYNSYLVGDELWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           V+HRD+K +++L+   G++KL+DFG          R    V   ++ APEL+     YG 
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 199
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            VD+W+ G +  E+++  P       +  +  I                 LP  ++  + 
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--------------LPPRLKNLHK 245
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
            +P L+             L ++   DP  R TA + L+H + + A  P
Sbjct: 246 VSPSLKG-----------FLDRLLVRDPAQRATAAELLKHPFLAKAGPP 283

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
            Y    D+W+ G    E+ + R P 
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
            Y    D+W+ G    E+ + R P 
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
            Y    D+W+ G    E+ + R P 
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 33  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 91
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 92  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 149
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 150 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 205
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
            Y    D+W+ G    E+ + R P 
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPI 230

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 150/358 (41%), Gaps = 57/358 (15%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           S +  D Y  +E +G G+Y V  + I   T    A+K I   K+      T   EI LL+
Sbjct: 17  SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP----TEEIEI-LLR 71
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
             + P+II L D +     +++V E M+    L+ ++R    F S  +  + +    K +
Sbjct: 72  YGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTV 129
Query: 125 AFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
            + H + V+HRD+KP+N+L     G+   +++ DFG A+   + +       +   + AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAP 189
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           E+L   + Y A  D+W+ G +   +L    PF  G  D  +  +I A  G+   S     
Sbjct: 190 EVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSGKFSLSG-- 244
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
                               + S SD A DL+SKM   DP  R+TA   L H      P 
Sbjct: 245 ------------------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH------PW 280
Query: 300 PTEPNKLPRPATKR-----------ASKASDFNPQEGPTVLSPPRKTRRVMPDREGFE 346
               ++LP+    R           A+  S  N  + P VL P    R  +  R G +
Sbjct: 281 IVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSP-VLEPV--GRSTLAQRRGIK 335

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
            Y    D+W+ G    E+ + R P 
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 64
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 122
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  ++HRD+KP+N+L+ S G++KL DFG++ ++  S    F   V  R Y +PE L G  
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGT- 178
Query: 188 QYGAGVDVWAAGCIFAEL-LNRRPF 211
            Y    D+W+ G    E+ + R P 
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELID 78
           +G G +  VY+A     G  VA+KK+++    +       ++EI LLK+L  P++I+   
Sbjct: 40  IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 79  AFPHKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           +F     L++V E  +  DL  +I++       +    +  Y       L   H + V+H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMH 159
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+KP N+ I + G +KL D GL R F S        V   +Y +PE +     Y    D
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH-ENGYNFKSD 218
Query: 195 VWAAGCIFAEL 205
           +W+ GC+  E+
Sbjct: 219 IWSLGCLLYEM 229

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHII 74
           R VLG+GTYG+VY   D      +AIK+I  R  +  + ++     EI L K LK  +I+
Sbjct: 27  RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH----EEIALHKHLKHKNIV 82
Query: 75  ELIDAFPHKGNLHLVFEFMET----DLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCH 128
           + + +F   G + +   FME      L  ++R+    L   +  I  Y +  L+GL + H
Sbjct: 83  QYLGSFSENGFIKI---FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL-FGA 186
              ++HRD+K +N+LI ++ G LK++DFG ++     +           Y APE++  G 
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
           + YG   D+W+ GC   E+   +P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKP 223

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 10/203 (4%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  SP
Sbjct: 9   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSP 67
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQM-TLKGLAFCHK 129
           +I+    AF   G + +  E M+   L+ V++       P  I   + +  +KGL +  +
Sbjct: 68  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLRE 125
Query: 130 KW-VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
           K  ++HRD+KP+N+L+ S G++KL DFG++      D      V  R Y +PE L G   
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDEMANEFVGTRSYMSPERLQGT-H 182
Query: 189 YGAGVDVWAAGCIFAEL-LNRRP 210
           Y    D+W+ G    E+ + R P
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYP 205

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHII 74
           R VLG+GTYG+VY   D      +AIK+I  R  +  + ++     EI L K LK  +I+
Sbjct: 13  RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH----EEIALHKHLKHKNIV 68
Query: 75  ELIDAFPHKGNLHLVFEFMET----DLETVIRNTNIFLSPAD--IKSYMQMTLKGLAFCH 128
           + + +F   G + +   FME      L  ++R+    L   +  I  Y +  L+GL + H
Sbjct: 69  QYLGSFSENGFIKI---FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 129 KKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL-FGA 186
              ++HRD+K +N+LI ++ G LK++DFG ++     +           Y APE++  G 
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
           + YG   D+W+ GC   E+   +P
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKP 209

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           +E LG G +  V  A +  TG+  A+K I   K  +G   +   EI +L+++K  +I+ L
Sbjct: 27  KETLGTGAFSEVVLAEEKATGKLFAVKCIP-KKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 77  IDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
            D +    +L+LV + +      + ++     F +  D  + ++  L  + + H+  ++H
Sbjct: 86  EDIYESPNHLYLVMQLVSGGELFDRIVEKG--FYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 135 RDMKPNNLLIGSH---GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           RD+KP NLL  S     ++ ++DFGL+++ G  D   T       Y APE+L   K Y  
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST-ACGTPGYVAPEVL-AQKPYSK 201
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            VD W+ G I   LL   P     +D     +I  A        W D+            
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI------------ 249
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                       SD A D +  +   DP  R T +QA  H + +
Sbjct: 250 ------------SDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 9/198 (4%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELK 69
           Y  ++ +G+G +  V  A    TG+ VA+K I     K  +N T+L    RE++++K L 
Sbjct: 17  YRLQKTIGKGNFAKVKLARHVLTGREVAVKII----DKTQLNPTSLQKLFREVRIMKILN 72
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
            P+I++L +    +  L+LV E+            +  +   + ++  +  +  + +CH+
Sbjct: 73  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           K+++HRD+K  NLL+     +K+ADFG +  F   ++  T    +  Y APEL  G K  
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF-CGSPPYAAPELFQGKKYD 191
Query: 190 GAGVDVWAAGCIFAELLN 207
           G  VDVW+ G I   L++
Sbjct: 192 GPEVDVWSLGVILYTLVS 209

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 181
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 182 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 228
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 229 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
Query: 289 LEH 291
           L+H
Sbjct: 269 LQH 271

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K E +G+G++G V+K ID +T + VAIK I L + ++ +     +EI +L +  SP++
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 82
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            +   ++     L ++ E++       +      L    I + ++  LKGL + H +  +
Sbjct: 83  TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 141
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+  HG++KLADFG+A        +    V   ++ APE++     Y +  
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKA 200
Query: 194 DVWAAGCIFAELLNRRP 210
           D+W+ G    EL    P
Sbjct: 201 DIWSLGITAIELARGEP 217

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 181
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 182 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 228
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 229 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
Query: 289 LEH 291
           L+H
Sbjct: 269 LQH 271

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 19  VLGEGTYGVVY---KAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREIKLLKELKSP 71
           VLG+G YG V+   K     TG+  A+K ++    +   K+  +  A R I  L+E+K P
Sbjct: 24  VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHP 81
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            I++LI AF   G L+L+ E++   +L   +    IF+         ++++  L   H+K
Sbjct: 82  FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM-ALGHLHQK 140
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQY 189
            +++RD+KP N+++   G +KL DFGL +     D   TH       Y APE+L  +   
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSGHN 199
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
            A VD W+ G +  ++L   P   G +    + KI   
Sbjct: 200 RA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 134/328 (40%), Gaps = 50/328 (15%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           ++ RY   + LGEG +G V + ID K  G+ VA+K +   K  +     A  EI++L+ L
Sbjct: 12  LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHL 68
Query: 69  KSP------HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTL 121
            +         +++++ F H G++ +VFE +       I+         D I+       
Sbjct: 69  NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHG-------------------QLKLADFGLARIFG 162
           K + F H   + H D+KP N+L                         +K+ DFG A    
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---T 185
Query: 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL---LNRRPFLQGSSDID 219
             D   +  V  R YRAPE++  A  +    DVW+ GCI  E        P       + 
Sbjct: 186 YDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 220 QLGKIFAAFGTATPSQWPDLAYLP----DYVEY----QYV--AAPPLRSLFPSAS---DD 266
            + +I          +     Y      D+ E+    +YV  A  PL+    S     + 
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304
Query: 267 ALDLLSKMFTYDPKARITAQQALEHRYF 294
             DL+ KM  YDP  RIT ++AL+H +F
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 19  VLGEGTYGVVY---KAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREIKLLKELKSP 71
           VLG+G YG V+   K     TG+  A+K ++    +   K+  +  A R I  L+E+K P
Sbjct: 24  VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHP 81
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            I++LI AF   G L+L+ E++   +L   +    IF+         ++++  L   H+K
Sbjct: 82  FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM-ALGHLHQK 140
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQY 189
            +++RD+KP N+++   G +KL DFGL +     D   TH       Y APE+L  +   
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMRSGHN 199
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
            A VD W+ G +  ++L   P   G +    + KI   
Sbjct: 200 RA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 134/328 (40%), Gaps = 50/328 (15%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           ++ RY   + LGEG +G V + ID K  G+ VA+K +   K  +     A  EI++L+ L
Sbjct: 12  LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHL 68
Query: 69  KSP------HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD-IKSYMQMTL 121
            +         +++++ F H G++ +VFE +       I+         D I+       
Sbjct: 69  NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHG-------------------QLKLADFGLARIFG 162
           K + F H   + H D+KP N+L                         +K+ DFG A    
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---T 185
Query: 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL---LNRRPFLQGSSDID 219
             D   +  V  R YRAPE++  A  +    DVW+ GCI  E        P       + 
Sbjct: 186 YDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 220 QLGKIFAAFGTATPSQWPDLAYLP----DYVEY----QYV--AAPPLRSLFPSAS---DD 266
            + +I          +     Y      D+ E+    +YV  A  PL+    S     + 
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304
Query: 267 ALDLLSKMFTYDPKARITAQQALEHRYF 294
             DL+ KM  YDP  RIT ++AL+H +F
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 38/247 (15%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--- 69
           RY+    LG G +  V+ A D      VA+K +R  K        A  EIKLL+ +    
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV---YTEAAEDEIKLLQRVNDAD 76
Query: 70  --------SPHIIELIDAFPHKG----NLHLVFEFMETDLETVIRNTNIFLSP-ADIKSY 116
                   + HI++L+D F HKG    ++ +VFE +  +L  +I+       P   +K  
Sbjct: 77  NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 117 MQMTLKGLAFCHKKW-VLHRDMKPNNLLIG------SHGQLKLADFGLARIFGSPDRRFT 169
            +  L GL + H++  ++H D+KP N+L+       +  Q+K+AD G A  +   D  +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DEHYT 193
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFL----QGSS---DIDQLG 222
           + +  R YR+PE+L GA  +G G D+W+  C+  EL+    FL    +G S   D D + 
Sbjct: 194 NSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELIT-GDFLFEPDEGHSYTKDDDHIA 251
Query: 223 KIFAAFG 229
           +I    G
Sbjct: 252 QIIELLG 258

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 38/247 (15%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--- 69
           RY+    LG G +  V+ A D      VA+K +R  K        A  EIKLL+ +    
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV---YTEAAEDEIKLLQRVNDAD 76
Query: 70  --------SPHIIELIDAFPHKG----NLHLVFEFMETDLETVIRNTNIFLSP-ADIKSY 116
                   + HI++L+D F HKG    ++ +VFE +  +L  +I+       P   +K  
Sbjct: 77  NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 117 MQMTLKGLAFCHKKW-VLHRDMKPNNLLIG------SHGQLKLADFGLARIFGSPDRRFT 169
            +  L GL + H++  ++H D+KP N+L+       +  Q+K+AD G A  +   D  +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DEHYT 193
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFL----QGSS---DIDQLG 222
           + +  R YR+PE+L GA  +G G D+W+  C+  EL+    FL    +G S   D D + 
Sbjct: 194 NSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELIT-GDFLFEPDEGHSYTKDDDHIA 251
Query: 223 KIFAAFG 229
           +I    G
Sbjct: 252 QIIELLG 258

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K E +G+G++G V+K ID +T + VAIK I L + ++ +     +EI +L +  SP++
Sbjct: 29  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 87
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            +   ++     L ++ E++       +      L    I + ++  LKGL + H +  +
Sbjct: 88  TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 146
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+  HG++KLADFG+A        +    V   ++ APE++     Y +  
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKA 205
Query: 194 DVWAAGCIFAELLNRRP 210
           D+W+ G    EL    P
Sbjct: 206 DIWSLGITAIELARGEP 222

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K E +G+G++G V+K ID +T + VAIK I L + ++ +     +EI +L +  SP++
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 67
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            +   ++     L ++ E++       +      L    I + ++  LKGL + H +  +
Sbjct: 68  TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 126
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+  HG++KLADFG+A        +    V   ++ APE++     Y +  
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKA 185
Query: 194 DVWAAGCIFAELLNRRP 210
           D+W+ G    EL    P
Sbjct: 186 DIWSLGITAIELARGEP 202

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K E +G+G++G V+K ID +T + VAIK I L + ++ +     +EI +L +  SP++
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 67
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            +   ++     L ++ E++       +      L    I + ++  LKGL + H +  +
Sbjct: 68  TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKI 126
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+  HG++KLADFG+A        +    V   ++ APE++     Y +  
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKA 185
Query: 194 DVWAAGCIFAELLNRRP 210
           D+W+ G    EL    P
Sbjct: 186 DIWSLGITAIELARGEP 202

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VA+K I     K  +N ++L    RE++++K L  P+I
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+LV E+            +  +   + ++  +  +  + +CH+K+++
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           HRD+K  NLL+ +   +K+ADFG +    FG+    F     A  Y APEL  G K  G 
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG---APPYAAPELFQGKKYDGP 192
Query: 192 GVDVWAAGCIFAELLN 207
            VDVW+ G I   L++
Sbjct: 193 EVDVWSLGVILYTLVS 208

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 50/308 (16%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D Y  +EV+G G   VV  A      + VAIK+I L K +  ++   L+EI+ + +   P
Sbjct: 10  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHP 68
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNT-------NIFLSPADIKSYMQMTLKG 123
           +I+    +F  K  L LV + +    +  +I++        +  L  + I + ++  L+G
Sbjct: 69  NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---GSPDRRFTHQVFAR--WYR 178
           L + HK   +HRD+K  N+L+G  G +++ADFG++      G   R    + F     + 
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++   + Y    D+W+ G    EL                     A G A   ++P 
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIEL---------------------ATGAAPYHKYPP 227
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDAL---------DLLSKMFTYDPKARITAQQAL 289
           +  L   ++      PP  SL     D  +          ++S     DP+ R TA + L
Sbjct: 228 MKVLMLTLQND----PP--SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
Query: 290 EHRYFSSA 297
            H++F  A
Sbjct: 282 RHKFFQKA 289

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VA+K I     K  +N ++L    RE++++K L  P+I
Sbjct: 13  KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+LV E+            + ++   + ++  +  +  + +CH+K+++
Sbjct: 69  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  NLL+ +   +K+ADFG +  F   ++  T    +  Y APEL  G K  G  V
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEV 187
Query: 194 DVWAAGCIFAELLN 207
           DVW+ G I   L++
Sbjct: 188 DVWSLGVILYTLVS 201

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 50/308 (16%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D Y  +EV+G G   VV  A      + VAIK+I L K +  ++   L+EI+ + +   P
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHP 73
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNT-------NIFLSPADIKSYMQMTLKG 123
           +I+    +F  K  L LV + +    +  +I++        +  L  + I + ++  L+G
Sbjct: 74  NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---GSPDRRFTHQVFAR--WYR 178
           L + HK   +HRD+K  N+L+G  G +++ADFG++      G   R    + F     + 
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++   + Y    D+W+ G    EL                     A G A   ++P 
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIEL---------------------ATGAAPYHKYPP 232
Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDAL---------DLLSKMFTYDPKARITAQQAL 289
           +  L   ++      PP  SL     D  +          ++S     DP+ R TA + L
Sbjct: 233 MKVLMLTLQND----PP--SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
Query: 290 EHRYFSSA 297
            H++F  A
Sbjct: 287 RHKFFQKA 294

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 144/323 (44%), Gaps = 58/323 (17%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           +KV D Y   E LG G + +V K  +  TG   A   IKK +    + GV    + RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +L+++  P+II L D + ++ ++ L+ E +              LS  +  S+++  L G
Sbjct: 68  ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H K + H D+KP N+++         +KL DFGLA           IFG+P+    
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I A  
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITA-- 232
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
                     ++Y  D+ E            F   S+ A D + K+   + + R+T Q+A
Sbjct: 233 ----------VSY--DFDE----------EFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFSSAPLPTEPNKLPRPAT 311
           L H + +  P+ T+   + R + 
Sbjct: 271 LRHPWIT--PVDTQQAMVRRESV 291

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P     
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VA+K I     K  +N ++L    RE++++K L  P+I
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+LV E+            +  +   + ++  +  +  + +CH+K+++
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  NLL+ +   +K+ADFG +  F   ++  T    +  Y APEL  G K  G  V
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEV 194
Query: 194 DVWAAGCIFAELLN 207
           DVW+ G I   L++
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VA+K I     K  +N ++L    RE++++K L  P+I
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+LV E+            +  +   + ++  +  +  + +CH+K+++
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  NLL+ +   +K+ADFG +  F   ++  T    +  Y APEL  G K  G  V
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEV 194
Query: 194 DVWAAGCIFAELLN 207
           DVW+ G I   L++
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 18/206 (8%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           EVLG+G +G   K    +TG+ + +K+  L +  E    T L+E+K+++ L+ P++++ I
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKE--LIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                   L+ + E+++   L  +I++ +     +   S+ +    G+A+ H   ++HRD
Sbjct: 74  GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133
Query: 137 MKPNNLLIGSHGQLKLADFGLARI-------------FGSPDRRFTHQVFAR-WYRAPEL 182
           +  +N L+  +  + +ADFGLAR+                PDR+  + V    ++ APE+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNR 208
           + G + Y   VDV++ G +  E++ R
Sbjct: 194 ING-RSYDEKVDVFSFGIVLCEIIGR 218

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H   + H D+KP N+++        ++K+ DFGLA           IFG+P+    
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---- 182
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  +    
Sbjct: 183 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANV---- 229
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +A   ++ D        EY           F + S  A D + ++   DPK R+T Q +
Sbjct: 230 -SAVNYEFED--------EY-----------FSNTSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 289 LEH 291
           L+H
Sbjct: 270 LQH 272

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VA++ I     K  +N ++L    RE++++K L  P+I
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVRII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+LV E+            +  +   + ++  +  +  + +CH+K+++
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           HRD+K  NLL+ +   +K+ADFG +    FG+    F     +  Y APEL  G K  G 
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG---SPPYAAPELFQGKKYDGP 192
Query: 192 GVDVWAAGCIFAELLN 207
            VDVW+ G I   L++
Sbjct: 193 EVDVWSLGVILYTLVS 208

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 145/345 (42%), Gaps = 49/345 (14%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G++G V  A    T +  AIK ++  +  Q + V  T + +  L    K P + +L
Sbjct: 26  VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+ V E++   DL   I+    F  P  +    ++++ GL F HK+ +++R
Sbjct: 86  HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI-GLFFLHKRGIIYR 144
Query: 136 DMKPNNLLIGSHGQLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           D+K +N+++ S G +K+ADFG+ +   + G   R F        Y APE++   + YG  
Sbjct: 145 DLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCG---TPDYIAPEII-AYQPYGKS 200
Query: 193 VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252
           VD WA G +  E+L  +P   G  D D+L +       + P                   
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDG-EDEDELFQSIMEHNVSYPK------------------ 241
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPTEPNKLP 307
                    S S +A+ +   + T  P  R+       +   EH +F         N+  
Sbjct: 242 ---------SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREI 292
Query: 308 RPATK---RASKASDFNP--QEGPTVLSPPRKTRRVMPDREGFEG 347
           +P  K       A +F+     G  VL PP +      D+  FEG
Sbjct: 293 QPPFKPKVCGKGAENFDKFFTRGQPVLXPPDQLVIANIDQSDFEG 337

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 58/293 (19%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLK 66
           K+ D ++  ++LG+G++G V+ A   KT Q  AIK ++  +    + V  T + +  L  
Sbjct: 15  KIED-FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIF-LSPADIKSYMQMTLKGL 124
             + P +  +   F  K NL  V E++   DL   I++ + F LS A    Y    + GL
Sbjct: 74  AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGL 131
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVF 173
            F H K +++RD+K +N+L+   G +K+ADFG+ +             G+PD        
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD-------- 183
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
              Y APE+L G K Y   VD W+ G +  E+L  +    G  +     ++F +     P
Sbjct: 184 ---YIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE----EELFHSIRMDNP 235
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
                  + P ++E                  +A DLL K+F  +P+ R+  +
Sbjct: 236 -------FYPRWLE-----------------KEAKDLLVKLFVREPEKRLGVR 264

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 148/358 (41%), Gaps = 57/358 (15%)
Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           S +  D Y  +E +G G+Y V  + I   T    A+K I   K+      T   EI LL+
Sbjct: 17  SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDP----TEEIEI-LLR 71
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
             + P+II L D +     +++V E  +    L+ ++R    F S  +  + +    K +
Sbjct: 72  YGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTITKTV 129
Query: 125 AFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
            + H + V+HRD+KP+N+L     G+   +++ DFG A+   + +       +   + AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAP 189
Query: 181 ELLFGAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           E+L   + Y A  D+W+ G  ++  L    PF  G  D  +  +I A  G+   S     
Sbjct: 190 EVL-ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPE--EILARIGSGKFSLSG-- 244
Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
                               + S SD A DL+SK    DP  R+TA   L H      P 
Sbjct: 245 ------------------GYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRH------PW 280
Query: 300 PTEPNKLPRPATKR-----------ASKASDFNPQEGPTVLSPPRKTRRVMPDREGFE 346
               ++LP+    R           A+  S  N  + P VL P    R  +  R G +
Sbjct: 281 IVHWDQLPQYQLNRQDAPHLVKGAXAATYSALNRNQSP-VLEPV--GRSTLAQRRGIK 335

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VA++ I     K  +N ++L    RE++++K L  P+I
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVRII----DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+LV E+            +  +   + ++  +  +  + +CH+K+++
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  NLL+ +   +K+ADFG +  F   ++  T    +  Y APEL  G K  G  V
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEV 194
Query: 194 DVWAAGCIFAELLN 207
           DVW+ G I   L++
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VAIK I     K  +N T+L    RE++++K L  P+I
Sbjct: 21  KTIGKGNFAKVKLARHILTGREVAIKII----DKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+L+ E+            +  +   + +S  +  +  + +CH+K ++
Sbjct: 77  VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  NLL+ +   +K+ADFG +  F +   +      A  Y APEL  G K  G  V
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEF-TVGGKLDAFCGAPPYAAPELFQGKKYDGPEV 195
Query: 194 DVWAAGCIFAELLN 207
           DVW+ G I   L++
Sbjct: 196 DVWSLGVILYTLVS 209

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 34/274 (12%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELID 78
           LG+G +G VY A + K+   VA+K +   + +KEGV     REI++   L  P+I+ L +
Sbjct: 31  LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 79  AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
            F  +  ++L+ E+    +L   ++ +  F       + M+     L +CH K V+HRD+
Sbjct: 91  YFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMYCHGKKVIHRDI 149
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
           KP NLL+G  G+LK+ADFG +    +P  R         Y  PE++ G + +   VD+W 
Sbjct: 150 KPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEG-RMHNEKVDLWC 206
Query: 198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257
            G +  ELL   P  + +S  +   +I                     V+ ++ A+ P  
Sbjct: 207 IGVLCYELLVGNPPFESASHNETYRRIVK-------------------VDLKFPASVP-- 245
Query: 258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                    A DL+SK+  ++P  R+   Q   H
Sbjct: 246 -------TGAQDLISKLLRHNPSERLPLAQVSAH 272

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VAIK I     K  +N T+L    RE++++K L  P+I
Sbjct: 18  KTIGKGNFAKVKLARHILTGREVAIKII----DKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+L+ E+            +  +   + +S  +  +  + +CH+K ++
Sbjct: 74  VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  NLL+ +   +K+ADFG +  F    +  T    +  Y APEL  G K  G  V
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF-CGSPPYAAPELFQGKKYDGPEV 192
Query: 194 DVWAAGCIFAELLN 207
           DVW+ G I   L++
Sbjct: 193 DVWSLGVILYTLVS 206

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           ++G G +G VY      TG+  A+K     +I++ KQ E +       + L+     P I
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 253
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + +  AF     L  + + M   DL   +    +F S AD++ Y    + GL   H ++V
Sbjct: 254 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHNRFV 312
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           ++RD+KP N+L+  HG ++++D GLA  F    ++    V    Y APE+L     Y + 
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 370
Query: 193 VDVWAAGCIFAELL-NRRPFLQ-GSSDIDQLGKIFAAFGTATPSQW-PDLAYL 242
            D ++ GC+  +LL    PF Q  + D  ++ ++        P  + P+L  L
Sbjct: 371 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 423

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           ++G G +G VY      TG+  A+K     +I++ KQ E +       + L+     P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 254
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + +  AF     L  + + M   DL   +    +F S AD++ Y    + GL   H ++V
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHNRFV 313
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           ++RD+KP N+L+  HG ++++D GLA  F    ++    V    Y APE+L     Y + 
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 193 VDVWAAGCIFAELL-NRRPFLQ-GSSDIDQLGKIFAAFGTATPSQW-PDLAYL 242
            D ++ GC+  +LL    PF Q  + D  ++ ++        P  + P+L  L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 424

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 58/293 (19%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLK 66
           K+ D  L + +LG+G++G V+ A   KT Q  AIK ++  +    + V  T + +  L  
Sbjct: 16  KIEDFELHK-MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIF-LSPADIKSYMQMTLKGL 124
             + P +  +   F  K NL  V E++   DL   I++ + F LS A    Y    + GL
Sbjct: 75  AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGL 132
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVF 173
            F H K +++RD+K +N+L+   G +K+ADFG+ +             G+PD        
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD-------- 184
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
              Y APE+L G K Y   VD W+ G +  E+L  +    G  +     ++F +     P
Sbjct: 185 ---YIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE----EELFHSIRMDNP 236
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
                  + P ++E                  +A DLL K+F  +P+ R+  +
Sbjct: 237 -------FYPRWLE-----------------KEAKDLLVKLFVREPEKRLGVR 265

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL----REIKLLKELKSPHI 73
           + +G+G +  V  A    TG+ VA+K I     K  +N ++L    RE+++ K L  P+I
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKII----DKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           ++L +    +  L+LV E+            +      + ++  +  +  + +CH+K+++
Sbjct: 76  VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           HRD+K  NLL+ +   +K+ADFG +    FG+    F     A  Y APEL  G K  G 
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG---APPYAAPELFQGKKYDGP 192
Query: 192 GVDVWAAGCIFAELLN 207
            VDVW+ G I   L++
Sbjct: 193 EVDVWSLGVILYTLVS 208

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           ++G G +G VY      TG+  A+K     +I++ KQ E +       + L+     P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 254
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + +  AF     L  + + M   DL   +    +F S AD++ Y    + GL   H ++V
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHNRFV 313
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           ++RD+KP N+L+  HG ++++D GLA  F    ++    V    Y APE+L     Y + 
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 193 VDVWAAGCIFAELL-NRRPFLQ-GSSDIDQLGKIFAAFGTATPSQW-PDLAYL 242
            D ++ GC+  +LL    PF Q  + D  ++ ++        P  + P+L  L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 424

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           ++G G +G VY      TG+  A+K     +I++ KQ E +       + L+     P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFI 254
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + +  AF     L  + + M   DL   +    +F S AD++ Y    + GL   H ++V
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHNRFV 313
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           ++RD+KP N+L+  HG ++++D GLA  F    ++    V    Y APE+L     Y + 
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 193 VDVWAAGCIFAELL-NRRPFLQ-GSSDIDQLGKIFAAFGTATPSQW-PDLAYL 242
            D ++ GC+  +LL    PF Q  + D  ++ ++        P  + P+L  L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 424

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           +DRY   + +G G +GV     D ++ + VA+K I  G   E ++    REI   + L+ 
Sbjct: 17  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---EKIDENVKREIINHRSLRH 73
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+   +      +L +V E+    +L   I N   F S  + + + Q  + G+++CH 
Sbjct: 74  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHA 132
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
             V HRD+K  N LL GS   +LK+ DFG ++   +   P       V    Y APE+L 
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLL 188
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  G   DVW+ G  ++  L+   PF     D ++              Q+     +P
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 240
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           DYV      +P  R            L+S++F  DP  RI+  +   H +F
Sbjct: 241 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 276

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 35/235 (14%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL-- 76
           VLG+G +G V KA +    +  AIKKIR  ++K     T L E+ LL  L   +++    
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQYVVRYYA 69
Query: 77  -----------IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
                      + A   K  L +  E+ E   L  +I + N+     +     +  L+ L
Sbjct: 70  AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR---------------IFGSPDRRFT 169
           ++ H + ++HRD+KP N+ I     +K+ DFGLA+               + GS D   T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-NLT 188
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
             +    Y A E+L G   Y   +D+++ G IF E++   PF  G   ++ L K+
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKL 241

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           +DRY   + +G G +GV     D ++ + VA+K I  G   E +     REI   + L+ 
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---EKIAANVKREIINHRSLRH 74
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+   +      +L +V E+    +L   I N   F S  + + + Q  + G+++CH 
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHA 133
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
             V HRD+K  N LL GS   +LK+ DFG ++   +   P       V    Y APE+L 
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLL 189
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  G   DVW+ G  ++  L+   PF     D ++              Q+     +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 241
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           DYV      +P  R            L+S++F  DP  RI+  +   H +F
Sbjct: 242 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 277

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K E +G+G++G V+K ID +T Q VAIK I L + ++ +     +EI +L +  S ++
Sbjct: 25  FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSSYV 83
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            +   ++     L ++ E++       +     F     I + ++  LKGL + H +  +
Sbjct: 84  TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF-DEFQIATMLKEILKGLDYLHSEKKI 142
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+   G +KLADFG+A        +    V   ++ APE++     Y +  
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYDSKA 201
Query: 194 DVWAAGCIFAELLNRRP 210
           D+W+ G    EL    P
Sbjct: 202 DIWSLGITAIELAKGEP 218

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 35/235 (14%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL-- 76
           VLG+G +G V KA +    +  AIKKIR  ++K     T L E+ LL  L   +++    
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQYVVRYYA 69
Query: 77  -----------IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
                      + A   K  L +  E+ E   L  +I + N+     +     +  L+ L
Sbjct: 70  AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR---------------IFGSPDRRFT 169
           ++ H + ++HRD+KP N+ I     +K+ DFGLA+               + GS D   T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-NLT 188
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
             +    Y A E+L G   Y   +D+++ G IF E++   PF  G   ++ L K+
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKL 241

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 30/282 (10%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           + K + +G+G++G VYK ID  T + VAIK I L + ++ +     +EI +L +  SP+I
Sbjct: 21  FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYI 79
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
                ++     L ++ E++       +      L    I + ++  LKGL + H +  +
Sbjct: 80  TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERKI 138
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           HRD+K  N+L+   G +KLADFG+A        +    V   ++ APE++     Y    
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDFKA 197
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+W+ G    EL    P    +SD+  +  +F     + P+           +E Q+  +
Sbjct: 198 DIWSLGITAIELAKGEP---PNSDLHPMRVLFLIPKNSPPT-----------LEGQH--S 241
Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            P +           + +      DP+ R TA++ L+H++ +
Sbjct: 242 KPFK-----------EFVEACLNKDPRFRPTAKELLKHKFIT 272

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 145/351 (41%), Gaps = 73/351 (20%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIR-LGKQKEGVNFTALREIKLLKE 67
           + +RY     LGEGT+G V + +D + G   VA+K I+ + K KE        EI +L++
Sbjct: 31  LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL----EINVLEK 86
Query: 68  L--KSPH----IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +  K P      +++ D F + G++ + FE +       +++ N    P     +M   L
Sbjct: 87  INEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQL 146
Query: 122 -KGLAFCHKKWVLHRDMKPNNLL-IGSHGQL------------------KLADFGLARIF 161
            + + F H   + H D+KP N+L + S  +L                  ++ DFG A   
Sbjct: 147 CQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT-- 204
Query: 162 GSPDRRFTHQ-----VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
                 F H+     V  R YRAPE++     +    DVW+ GCI  E        Q   
Sbjct: 205 ------FDHEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHD 257
Query: 217 DIDQLGKIFAAFGTATPSQ-----------------WPDLAYLPDYVEYQYVAAPPLRSL 259
           + + L  +    G   PS+                 W +      YV        PLR  
Sbjct: 258 NREHLAMMERILG-PIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVREN---CKPLRRY 313
Query: 260 FPSASDDA---LDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE-PNKL 306
             S +++     DL+  M  Y+P  R+T  +AL+H +F  A L  E PNKL
Sbjct: 314 LTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF--ARLRAEPPNKL 362

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVN 55
           + +V +  +   RY++   LG+G +   Y+  D  T +  A   + K  L K  QKE ++
Sbjct: 31  IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 56  FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
                EI + K L +PH++     F     +++V E         +      ++  + + 
Sbjct: 91  ----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
           +M+ T++G+ + H   V+HRD+K  NL +     +K+ DFGLA        R        
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
            Y APE+L   K +   VD+W+ GCI   LL  +P  + S 
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 71  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVN 55
           + +V +  +   RY++   LG+G +   Y+  D  T +  A   + K  L K  QKE ++
Sbjct: 31  IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 56  FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
                EI + K L +PH++     F     +++V E         +      ++  + + 
Sbjct: 91  ----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
           +M+ T++G+ + H   V+HRD+K  NL +     +K+ DFGLA        R        
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
            Y APE+L   K +   VD+W+ GCI   LL  +P  + S 
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVN 55
           + +V +  +   RY++   LG+G +   Y+  D  T +  A   + K  L K  QKE ++
Sbjct: 15  IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 74
Query: 56  FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
                EI + K L +PH++     F     +++V E         +      ++  + + 
Sbjct: 75  ----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
           +M+ T++G+ + H   V+HRD+K  NL +     +K+ DFGLA        R        
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
            Y APE+L   K +   VD+W+ GCI   LL  +P  + S 
Sbjct: 191 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 230

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVN 55
           + +V +  +   RY++   LG+G +   Y+  D  T +  A   + K  L K  QKE ++
Sbjct: 31  IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 56  FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKS 115
                EI + K L +PH++     F     +++V E         +      ++  + + 
Sbjct: 91  ----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
           +M+ T++G+ + H   V+HRD+K  NL +     +K+ DFGLA        R        
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
            Y APE+L   K +   VD+W+ GCI   LL  +P  + S 
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 71  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 71  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 71  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKF- 70
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 71  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 68
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 69  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 126
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 187 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 225
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 226 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 264

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 56/307 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           +KV D Y   E LG G + +V K  +  TG   A   IKK +    + GV+   + RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +L+++   ++I L D + ++ ++ L+ E +              LS  +  S+++  L G
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H K + H D+KP N+++         +KL DFGLA           IFG+P+    
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I A  
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITA-- 232
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
                            V Y +         F   S+ A D + K+   + + R+T Q+A
Sbjct: 233 -----------------VSYDFD-----EEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFS 295
           L H + +
Sbjct: 271 LRHPWIT 277

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           +KV D Y   E LG G + +V K  +  TG   A   IKK +    + GV+   + RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +L+++   ++I L D + ++ ++ L+ E +              LS  +  S+++  L G
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H K + H D+KP N+++         +KL DFGLA           IFG+P+    
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I A  
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITA-- 232
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
                            V Y +         F   S+ A D + K+   + + R+T Q+A
Sbjct: 233 -----------------VSYDFD-----EEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEH 291
           L H
Sbjct: 271 LRH 273

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           +DRY   + +G G +GV     D ++ + VA+K I  G   E ++    REI   + L+ 
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---EKIDENVKREIINHRSLRH 74
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+   +      +L +V E+    +L   I N   F S  + + + Q  + G+++CH 
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHA 133
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
             V HRD+K  N LL GS   +LK+  FG ++   +   P       V    Y APE+L 
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS----TVGTPAYIAPEVLL 189
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  G   DVW+ G  ++  L+   PF     D ++              Q+     +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 241
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           DYV      +P  R            L+S++F  DP  RI+  +   H +F
Sbjct: 242 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 277

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 71  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           +DRY   + +G G +GV     D ++ + VA+K I  G   E ++    REI   + L+ 
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---EKIDENVKREIINHRSLRH 74
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+   +      +L +V E+    +L   I N   F S  + + + Q  + G+++CH 
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHA 133
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
             V HRD+K  N LL GS   +LK+  FG ++   +   P       V    Y APE+L 
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP----KDTVGTPAYIAPEVLL 189
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  G   DVW+ G  ++  L+   PF     D ++              Q+     +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 241
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           DYV      +P  R            L+S++F  DP  RI+  +   H +F
Sbjct: 242 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 277

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSXQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 70
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 71  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 18  EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +VLG+G++G V+   K     +G   A+K ++    K         E  +L ++  P ++
Sbjct: 34  KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           +L  AF  +G L+L+ +F+   DL T +    +F +  D+K Y+     GL   H   ++
Sbjct: 94  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALGLDHLHSLGII 152
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+   G +KL DFGL++     +++         Y APE++   + +    
Sbjct: 153 YRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV-NRQGHSHSA 211
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
           D W+ G +  E+L      QG    + +  I  A
Sbjct: 212 DWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YGVV K     +GQ +A+K+IR     +      +     ++ +  P  +    A
Sbjct: 59  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 80  FPHKGNLHLVFEFMETDLE----TVIRNTNIFLSPADIKSYMQMTL-KGLAFCHKKW-VL 133
              +G++ +  E M+T L+     VI        P DI   + +++ K L   H K  V+
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTI--PEDILGKIAVSIVKALEHLHSKLSVI 176
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL---FGAKQYG 190
           HRD+KP+N+LI + GQ+K+ DFG++        + T     + Y APE +      K Y 
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK-TIDAGCKPYMAPERINPELNQKGYS 235
Query: 191 AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKI 224
              D+W+ G    EL + R P+    +   QL ++
Sbjct: 236 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 44/310 (14%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           K++ ++Y+  E LG G +G+V++ ++T + +T   K +++    + +     +EI +L  
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL---VKKEISILNI 57
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIR-NTNIF-LSPADIKSYMQMTLKGLA 125
            +  +I+ L ++F     L ++FEF+ + L+   R NT+ F L+  +I SY+    + L 
Sbjct: 58  ARHRNILHLHESFESMEELVMIFEFI-SGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 126 FCHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           F H   + H D++P N++  +     +K+ +FG AR    P   F     A  Y APE +
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-KPGDNFRLLFTAPEYYAPE-V 174
Query: 184 FGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
                     D+W+ G +   LL+   PFL  ++      +I      A           
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIENIMNA----------- 218
Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE 302
               EY +         F   S +A+D + ++   + K+R+TA +AL+H        P  
Sbjct: 219 ----EYTFDEEA-----FKEISIEAMDFVDRLLVKERKSRMTASEALQH--------PWL 261
Query: 303 PNKLPRPATK 312
             K+ R +TK
Sbjct: 262 KQKIERVSTK 271

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 56/307 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           +KV D Y   E LG G + +V K  +  TG   A   IKK +    + GV+   + RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +L+++   ++I L D + ++ ++ L+ E +              LS  +  S+++  L G
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H K + H D+KP N+++         +KL DFGLA           IFG+P+    
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I    
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANI---- 230
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
                     ++Y  D+ E            F   S+ A D + K+   + + R+T Q+A
Sbjct: 231 --------TSVSY--DFDE----------EFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFS 295
           L H + +
Sbjct: 271 LRHPWIT 277

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 56/303 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           +KV D Y   E LG G + +V K  +  TG   A   IKK +    + GV+   + RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +L+++   ++I L D + ++ ++ L+ E +              LS  +  S+++  L G
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H K + H D+KP N+++         +KL DFGLA           IFG+P+    
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I    
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANI---- 230
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
                     ++Y  D+ E            F   S+ A D + K+   + + R+T Q+A
Sbjct: 231 --------TSVSY--DFDE----------EFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEH 291
           L H
Sbjct: 271 LRH 273

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 56/307 (18%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           +KV D Y   E LG G + +V K  +  TG   A   IKK +    + GV+   + RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +L+++   ++I L D + ++ ++ L+ E +              LS  +  S+++  L G
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR----------IFGSPDRRFT 169
           + + H K + H D+KP N+++         +KL DFGLA           IFG+P+    
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE---- 183
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228
                  + APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I +  
Sbjct: 184 -------FVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITS-- 232
Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
                            V Y +         F   S+ A D + K+   + + R+T Q+A
Sbjct: 233 -----------------VSYDFD-----EEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 289 LEHRYFS 295
           L H + +
Sbjct: 271 LRHPWIT 277

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 54/331 (16%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIR-LGKQKEGVNFTALREIKLLKE 67
           + +RY     LGEGT+G V + +D   G++ VA+K IR +GK +E     A  EI +LK+
Sbjct: 17  LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA----ARLEINVLKK 72
Query: 68  LKSPH------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +K          + + D F   G++ + FE +  +    ++  N    P     +M   L
Sbjct: 73  IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 132
Query: 122 -KGLAFCHKKWVLHRDMKPNNLLIGS-------------------HGQLKLADFGLARIF 161
              L F H+  + H D+KP N+L  +                   +  +++ADFG A   
Sbjct: 133 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 191
Query: 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221
                  T  V  R YR PE++     +    DVW+ GCI  E        Q   + + L
Sbjct: 192 --DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 222 GKIFAAFGTATPSQWPD------------LAYLPDYVEYQYVA--APPLRSLFPSASDDA 267
             +    G   PS                L +  +  + +YV     PL+S     S + 
Sbjct: 249 VMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 307
Query: 268 L---DLLSKMFTYDPKARITAQQALEHRYFS 295
           +   DL+ +M  +DP  RIT  +AL H +F+
Sbjct: 308 VQLFDLMRRMLEFDPAQRITLAEALLHPFFA 338

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 54/331 (16%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIR-LGKQKEGVNFTALREIKLLKE 67
           + +RY     LGEGT+G V + +D   G++ VA+K IR +GK +E     A  EI +LK+
Sbjct: 26  LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA----ARLEINVLKK 81
Query: 68  LKSPH------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +K          + + D F   G++ + FE +  +    ++  N    P     +M   L
Sbjct: 82  IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 141
Query: 122 -KGLAFCHKKWVLHRDMKPNNLLIGS-------------------HGQLKLADFGLARIF 161
              L F H+  + H D+KP N+L  +                   +  +++ADFG A   
Sbjct: 142 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 200
Query: 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221
                  T  V  R YR PE++     +    DVW+ GCI  E        Q   + + L
Sbjct: 201 --DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 222 GKIFAAFGTATPSQWPD------------LAYLPDYVEYQYVA--APPLRSLFPSASDDA 267
             +    G   PS                L +  +  + +YV     PL+S     S + 
Sbjct: 258 VMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 316
Query: 268 L---DLLSKMFTYDPKARITAQQALEHRYFS 295
           +   DL+ +M  +DP  RIT  +AL H +F+
Sbjct: 317 VQLFDLMRRMLEFDPAQRITLAEALLHPFFA 347

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 35/235 (14%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           VLG+G +G V KA +    +  AIKKIR  ++K     T L E+ LL  L   +++    
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVXLLASLNHQYVVRYYA 69
Query: 79  AFPHKGN-------------LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           A+  + N             L +  E+ E   L  +I + N+     +     +  L+ L
Sbjct: 70  AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR---------------IFGSPDRRFT 169
           ++ H + ++HR++KP N+ I     +K+ DFGLA+               + GS D   T
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD-NLT 188
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
             +    Y A E+L G   Y   +D ++ G IF E +   PF  G   ++ L K+
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNILKKL 241

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 54/331 (16%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIR-LGKQKEGVNFTALREIKLLKE 67
           + +RY     LGEGT+G V + +D   G++ VA+K IR +GK +E     A  EI +LK+
Sbjct: 49  LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA----ARLEINVLKK 104
Query: 68  LKSPH------IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +K          + + D F   G++ + FE +  +    ++  N    P     +M   L
Sbjct: 105 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 164
Query: 122 -KGLAFCHKKWVLHRDMKPNNLLIGS-------------------HGQLKLADFGLARIF 161
              L F H+  + H D+KP N+L  +                   +  +++ADFG A   
Sbjct: 165 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 223
Query: 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221
                  T  V  R YR PE++     +    DVW+ GCI  E        Q   + + L
Sbjct: 224 --DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 222 GKIFAAFGTATPSQWPD------------LAYLPDYVEYQYVA--APPLRSLFPSASDDA 267
             +    G   PS                L +  +  + +YV     PL+S     S + 
Sbjct: 281 VMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 339
Query: 268 L---DLLSKMFTYDPKARITAQQALEHRYFS 295
           +   DL+ +M  +DP  RIT  +AL H +F+
Sbjct: 340 VQLFDLMRRMLEFDPAQRITLAEALLHPFFA 370

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 53/324 (16%)
Query: 18  EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +VLG+G++G V+   K   +   Q  A+K ++    K         E  +L E+  P I+
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           +L  AF  +G L+L+ +F+   DL T + +  +  +  D+K Y+      L   H   ++
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+   G +KL DFGL++     +++         Y APE++   + +    
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSA 207
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIF-AAFGTATPSQWPDLAYLPDYVEYQYVA 252
           D W+ G +  E+L      QG    + +  I  A  G            +P ++      
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG------------MPQFL------ 249
Query: 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPTEPNKLP 307
                      S +A  LL  +F  +P  R+ A     ++   H +FS+     + NKL 
Sbjct: 250 -----------SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST----IDWNKLY 294
Query: 308 R--------PATKRASKASDFNPQ 323
           R        PAT R      F+P+
Sbjct: 295 RREIHPPFKPATGRPEDTFYFDPE 318

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF-TALREIKLLKELKSPHIIELID 78
           +G+G++G V       T +  A+K +   K  E        +E+++++ L+ P ++ L  
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 79  AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           +F  + ++ +V + +   DL   ++  N+      +K ++   +  L +   + ++HRDM
Sbjct: 83  SFQDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQRIIHRDM 141
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK--QYGAGVDV 195
           KP+N+L+  HG + + DF +A +    + + T     + Y APE+    K   Y   VD 
Sbjct: 142 KPDNILLDEHGHVHITDFNIAAMLPR-ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDW 200
Query: 196 WAAGCIFAELL-NRRPF-LQGSSDIDQLGKIFAAFGTATPSQW 236
           W+ G    ELL  RRP+ ++ S+   ++   F       PS W
Sbjct: 201 WSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW 243

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           +DRY   + +G G +GV     D +  + VA+K I  G   E ++    REI   + L+ 
Sbjct: 18  SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG---EKIDENVKREIINHRSLRH 74
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+   +      +L +V E+    +L   I N   F S  + + + Q  + G+++ H 
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYAHA 133
Query: 130 KWVLHRDMKP-NNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
             V HRD+K  N LL GS   +LK+ADFG ++   +   P       V    Y APE+L 
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP----KSAVGTPAYIAPEVLL 189
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  G   DVW+ G  ++  L+   PF     D ++              Q+     +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----EDPEEPKNFRKTIHRILNVQYA----IP 241
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           DYV      +P  R            L+S++F  DP  RI+  +   H +F
Sbjct: 242 DYVH----ISPECRH-----------LISRIFVADPAKRISIPEIRNHEWF 277

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 129/323 (39%), Gaps = 46/323 (14%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           +DRY   + +G G +GV     D  T + VA+K I  G     ++    REI   + L+ 
Sbjct: 19  SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRH 75
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I+   +      +L ++ E+    +L   I N   F S  + + + Q  L G+++CH 
Sbjct: 76  PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRF-SEDEARFFFQQLLSGVSYCHS 134
Query: 130 KWVLHRDMK-PNNLLIGSHG-QLKLADFGLAR---IFGSPDRRFTHQVFARWYRAPELLF 184
             + HRD+K  N LL GS   +LK+ DFG ++   +   P       V    Y APE+L 
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLL 190
Query: 185 GAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             +  G   DVW+ G  ++  L+   PF       D    I                 +P
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS--------IP 242
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
           D +                 S +   L+S++F  DP  RI+  +   H +F         
Sbjct: 243 DDIR---------------ISPECCHLISRIFVADPATRISIPEIKTHSWFL-------- 279
Query: 304 NKLPRPATKRASKASDFNPQEGP 326
             LP      ++  S F   E P
Sbjct: 280 KNLPADLMNESNTGSQFQEPEQP 302

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG YG V  A++  T + VA+K + + K+         +EI +   L   ++++  
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINAMLNHENVVKF- 70
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 71  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 227
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 228 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 124/296 (41%), Gaps = 45/296 (15%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
           ++DRY   E+LG G    V+ A D +  + VA+K +R    ++   +   R E +    L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69  KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             P I+ + D   A    G L ++V E+++      I +T   ++P      +    + L
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
            F H+  ++HRD+KP N++I +   +K+ DFG+AR         T     +    Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
              G     A  DV++ GC+  E+L   P   G S                         
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDS------------------------- 223
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALD-----LLSKMFTYDPKARITAQQALEHR 292
            PD V YQ+V   P+    PSA  + L      ++ K    +P+ R   Q A E R
Sbjct: 224 -PDSVAYQHVREDPIP---PSARHEGLSADLDAVVLKALAKNPENRY--QTAAEMR 273

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + +G G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E+M   D+ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +K+ADFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + +G G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E+M   D+ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +K+ADFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 75
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 76  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 138 KPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
              N L+G +  +K+ADFGL+R+  G          F   + APE L    ++    DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 194
Query: 197 AAGCIFAEL 205
           A G +  E+
Sbjct: 195 AFGVLLWEI 203

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 78
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 79  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 138 KPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
              N L+G +  +K+ADFGL+R+  G          F   + APE L    ++    DVW
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 197
Query: 197 AAGCIFAEL 205
           A G +  E+
Sbjct: 198 AFGVLLWEI 206

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YGVV K     +GQ +A+K+IR     +      +     ++ +  P  +    A
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 80  FPHKGNLHLVFEFMETDLE----TVIRNTNIFLSPADIKSYMQMTL-KGLAFCHKKW-VL 133
              +G++ +  E M+T L+     VI        P DI   + +++ K L   H K  V+
Sbjct: 75  LFREGDVWICMELMDTSLDKFYKQVIDKGQTI--PEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL---FGAKQYG 190
           HRD+KP+N+LI + GQ+K+ DFG++  +   D         + Y APE +      K Y 
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDIDAGCKPYMAPERINPELNQKGYS 191
Query: 191 AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKI 224
              D+W+ G    EL + R P+    +   QL ++
Sbjct: 192 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
           ++DRY   E+LG G    V+ A D +  + VA+K +R    ++   +   R E +    L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69  KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             P I+ + D   A    G L ++V E+++      I +T   ++P      +    + L
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
            F H+  ++HRD+KP N++I +   +K+ DFG+AR         T     +    Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
              G     A  DV++ GC+  E+L   P   G S +
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 75
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 76  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       FT    A++   + APE L    ++    D
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPESL-AYNKFSIKSD 192
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 193 VWAFGVLLWEI 203

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LGEG  G V  A++  T + VA+K + + K+         +EI + K L   ++++  
Sbjct: 12  QTLGEGAAGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKF- 69
Query: 78  DAFPHK--GNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             + H+  GN+  +F    +  E   R   +I +   D + +    + G+ + H   + H
Sbjct: 70  --YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARW-YRAPELLFGAKQYGAG 192
           RD+KP NLL+     LK++DFGLA +F   +R R  +++     Y APELL   + +   
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 193 VDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
           VDVW+ G +   +L    P+ Q S    +                       D+ E +  
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---------------------DWKEKKTY 226
Query: 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             P     +       L LL K+   +P ARIT     + R+++
Sbjct: 227 LNP-----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 112/271 (41%), Gaps = 33/271 (12%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELID 78
           LG G+YG V+K    + G+  A+K+     +        L E+   +++ + P  + L  
Sbjct: 65  LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 79  AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           A+   G L+L  E     L+         L  A +  Y++ TL  LA  H + ++H D+K
Sbjct: 125 AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVK 184
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAA 198
           P N+ +G  G+ KL DFGL    G+       +   R Y APELL G+  YG   DV++ 
Sbjct: 185 PANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-YMAPELLQGS--YGTAADVFSL 241
Query: 199 GCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRS 258
           G    E+        G     QL +                 YLP   E+    +  LRS
Sbjct: 242 GLTILEVACNMELPHGGEGWQQLRQ----------------GYLPP--EFTAGLSSELRS 283
Query: 259 LFPSASDDALDLLSKMFTYDPKARITAQQAL 289
                      +L  M   DPK R TA+  L
Sbjct: 284 -----------VLVMMLEPDPKLRATAEALL 303

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 78  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 195 VWAFGVLLWEI 205

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G YG V K +   +GQ +A+K+IR    ++      +    +++    P+I++   A
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 80  FPHKGNLHLVFEFMETDLETVIRNTNIFLS---PADIKSYMQM-TLKGLAFCHKKW-VLH 134
              +G+  +  E M T  +   +     L    P +I   + + T+K L    +   ++H
Sbjct: 90  LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149
Query: 135 RDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELL--FGAKQ-YG 190
           RD+KP+N+L+   G +KL DFG++ ++  S  +  T     R Y APE +    ++Q Y 
Sbjct: 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TRDAGCRPYMAPERIDPSASRQGYD 207
Query: 191 AGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKI 224
              DVW+ G    EL   R P+ + +S  DQL ++
Sbjct: 208 VRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV 242

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 47/297 (15%)
Query: 14  YLKREVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           +  ++VLG G  G +VY+ +     + VA+K+I      E  +F A RE++LL+E  + P
Sbjct: 26  FCPKDVLGHGAEGTIVYRGM--FDNRDVAVKRIL----PECFSF-ADREVQLLRESDEHP 78
Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           ++I        +   ++  E     L+  +   +      +  + +Q T  GLA  H   
Sbjct: 79  NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN 138
Query: 132 VLHRDMKPNNLLI---GSHGQLK--LADFGLARIFGSPDRRFTHQVFA---RWYRAPELL 183
           ++HRD+KP+N+LI    +HG++K  ++DFGL +        F+ +        + APE+L
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML 198
Query: 184 F--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
                +     VD+++AGC+F  +++     +GS            FG +   Q   L  
Sbjct: 199 SEDCKENPTYTVDIFSAGCVFYYVIS-----EGSH----------PFGKSLQRQANIL-- 241
Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDAL--DLLSKMFTYDPKARITAQQALEHRYFSS 296
                    + A  L  L P   +D +  +L+ KM   DP+ R +A+  L+H +F S
Sbjct: 242 ---------LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 78  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 195 VWAFGVLLWEI 205

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
           ++DRY   E+LG G    V+ A D +  + VA+K +R    ++   +   R E +    L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69  KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             P I+ + D   A    G L ++V E+++      I +T   ++P      +    + L
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
            F H+  ++HRD+KP N++I +   +K+ DFG+AR         T     +    Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
              G     A  DV++ GC+  E+L   P   G S +
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 83  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 199
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 200 VWAFGVLLWEI 210

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 9/217 (4%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
           ++DRY   E+LG G    V+ A D +  + VA+K +R    ++   +   R E +    L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69  KSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             P I+ + D   A    G L ++V E+++      I +T   ++P      +    + L
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---GSPDRRFTHQVFARWYRAPE 181
            F H+  ++HRD+KP N+LI +   +K+ DFG+AR     G+   +    +    Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
              G     A  DV++ GC+  E+L   P   G S +
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 124/298 (41%), Gaps = 56/298 (18%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHI 73
           L  + LG G + VV + I   TGQ  A K ++  ++ +      L EI +L+  KS P +
Sbjct: 32  LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 74  IELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I L + + +   + L+ E+          +      +S  D+   ++  L+G+ + H+  
Sbjct: 92  INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 132 VLHRDMKPNNLLIGS---HGQLKLADFGLAR----------IFGSPDRRFTHQVFARWYR 178
           ++H D+KP N+L+ S    G +K+ DFG++R          I G+P+           Y 
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE-----------YL 200
Query: 179 APELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE+L          D+W  G I +  L +  PF+                G      + 
Sbjct: 201 APEIL-NYDPITTATDMWNIGIIAYMLLTHTSPFV----------------GEDNQETYL 243
Query: 238 DLAYLP-DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           +++ +  DY E            F S S  A D +  +   +P+ R TA+  L H + 
Sbjct: 244 NISQVNVDYSE----------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 199
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 200 VWAFGVLLWEI 210

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
              N L+G +  +K+ADFGL+R+  G          F   + APE L    ++    DVW
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 201
Query: 197 AAGCIFAEL 205
           A G +  E+
Sbjct: 202 AFGVLLWEI 210

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D  LK + LGEG++ +  K +  K+ Q  A+K I   K+ E      +  +KL +    P
Sbjct: 11  DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLCE--GHP 66
Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I++L + F  + +  LV E +   +L   I+    F S  +    M+  +  ++  H  
Sbjct: 67  NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHF-SETEASYIMRKLVSAVSHMHDV 125
Query: 131 WVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            V+HRD+KP NLL        ++K+ DFG AR+    ++      F   Y APELL    
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQN 184
Query: 188 QYGAGVDVWAAGCIFAELLN-RRPF------LQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
            Y    D+W+ G I   +L+ + PF      L  +S ++ + KI     +     W ++ 
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV- 243
Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283
                                  S +A DL+  + T DP  R+
Sbjct: 244 -----------------------SQEAKDLIQGLLTVDPNKRL 263

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKL 64
           + K + +RY   + LG G    VY A DT     VAIK I +  ++KE       RE+  
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +L   +I+ +ID        +LV E++E    +    ++  LS     ++    L G+
Sbjct: 65  SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR-WYRAPELL 183
              H   ++HRD+KP N+LI S+  LK+ DFG+A+         T+ V     Y +PE  
Sbjct: 125 KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
            G +      D+++ G +  E+L   P   G +
Sbjct: 185 KG-EATDECTDIYSIGIVLYEMLVGEPPFNGET 216

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 34/282 (12%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           ++  EVLG G +  V+      TG+  A+K I+  K     + +   EI +LK++K  +I
Sbjct: 11  FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK--KSPAFRDSSLENEIAVLKKIKHENI 68
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + L D +    + +LV + +   +L   I    ++ +  D    +Q  L  + + H+  +
Sbjct: 69  VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVY-TEKDASLVIQQVLSAVKYLHENGI 127
Query: 133 LHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
           +HRD+KP NLL  +   + ++ + DFGL+++    +   +       Y APE+L   K Y
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACGTPGYVAPEVL-AQKPY 184
Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              VD W+ G I   LL   P     ++     KI   +       W D+          
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI---------- 234
Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                         S+ A D +  +   DP  R T ++AL H
Sbjct: 235 --------------SESAKDFICHLLEKDPNERYTCEKALSH 262

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 199
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 200 VWAFGVLLWEI 210

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 195 VWAFGVLLWEI 205

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 195 VWAFGVLLWEI 205

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 82
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 199
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 200 VWAFGVLLWEI 210

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 25  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 81
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 82  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 141
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 198
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 199 VWAFGVLLWEI 209

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 9/219 (4%)
Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLK 66
             ++DRY   E+LG G    V+ A D +  + VA+K +R    ++   +   R E +   
Sbjct: 25  SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 84
Query: 67  ELKSPHIIELID---AFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
            L  P I+ + D   A    G L ++V E+++      I +T   ++P      +    +
Sbjct: 85  ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRA 179
            L F H+  ++HRD+KP N++I +   +K+ DFG+AR         T     +    Y +
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
           PE   G     A  DV++ GC+  E+L   P   G S +
Sbjct: 205 PEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 34  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 90
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 91  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 150
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 207
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 208 VWAFGVLLWEI 218

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 195 VWAFGVLLWEI 205

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 79
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 80  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 196
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 197 VWAFGVLLWEI 207

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 32/255 (12%)
Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD--------LETVIRNTNIFLSPAD 112
           E++++ ++K+ + +       +   +++++E+ME D           + +N   F+    
Sbjct: 93  ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 113 IKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171
           IK  ++  L   ++ H +K + HRD+KP+N+L+  +G++KL+DFG +      D++    
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM--VDKKIKGS 210
Query: 172 VFARWYRAPELLFGAKQY-GAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIFAAFG 229
                +  PE       Y GA VD+W+ G C++    N  PF    S ++    I     
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI----- 265
Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDAL-----DLLSKMFTYDPKARIT 284
                +  ++ Y  D   + Y    PL +   + S++ L     D L      +P  RIT
Sbjct: 266 -----RTKNIEYPLDRNHFLY----PLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT 316
Query: 285 AQQALEHRYFSSAPL 299
           ++ AL+H + +   +
Sbjct: 317 SEDALKHEWLADTNI 331

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 77
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 194
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 195 VWAFGVLLWEI 205

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 79
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 80  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESL-AYNKFSIKSD 196
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 197 VWAFGVLLWEI 207

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 18  EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +VLG+G++G V+   K   +   Q  A+K ++    K         E  +L E+  P I+
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           +L  AF  +G L+L+ +F+   DL T +    +F +  D+K Y+      L   H   ++
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALALDHLHSLGII 148
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+   G +KL DFGL++     +++         Y APE++   + +    
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSA 207
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
           D W+ G +  E+L      QG    + +  I  A
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 284
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HR++
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNL 344
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 401
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 402 VWAFGVLLWEI 412

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 18  EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +VLG+G++G V+   K   +   Q  A+K ++    K         E  +L E+  P I+
Sbjct: 31  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
           +L  AF  +G L+L+ +F+   DL T +    +F +  D+K Y+      L   H   ++
Sbjct: 91  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALALDHLHSLGII 149
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           +RD+KP N+L+   G +KL DFGL++     +++         Y APE++   + +    
Sbjct: 150 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSA 208
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
           D W+ G +  E+L      QG    + +  I  A
Sbjct: 209 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKEL 68
           ++DRY   E+LG G    V+ A D +  + VA+K +R    ++   +   R E +    L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 69  KSPHIIELI---DAFPHKGNL-HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             P I+ +    +A    G L ++V E+++      I +T   ++P      +    + L
Sbjct: 70  NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE 181
            F H+  ++HRD+KP N++I +   +K+ DFG+AR         T     +    Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
              G     A  DV++ GC+  E+L   P   G S +
Sbjct: 190 QARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +G VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 19  LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 75
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 76  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 138 KPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
              N L+G +  +K+ADFGL+R+  G          F   + APE L    ++    DVW
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 194
Query: 197 AAGCIFAEL 205
           A G +  E+
Sbjct: 195 AFGVLLWEI 203

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 78
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 79  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAPAGAKFPIKWTAPESL-AYNKFSIKSD 195
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 196 VWAFGVLLWEI 206

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 79
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 80  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGD--TYTAPAGAKFPIKWTAPESL-AYNKFSIKSD 196
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 197 VWAFGVLLWEI 207

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G GT G V+K    KTG  +A+K++R    KE      +    +LK    P+I++    
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 80  FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMK 138
           F    ++ +  E M T  E + +     +    +       +K L +  +K  V+HRD+K
Sbjct: 93  FITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK 152
Query: 139 PNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFARWYRAPELLF----GAKQYGAGV 193
           P+N+L+   GQ+KL DFG++ R+    D+          Y APE +         Y    
Sbjct: 153 PSNILLDERGQIKLCDFGISGRLV--DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA 210
Query: 194 DVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIF 225
           DVW+ G    EL   + P+    +D + L K+ 
Sbjct: 211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVL 243

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY+ +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 323
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   +++ EFM   +L   +R  N     A +  YM   +   + +  KK  +HR++
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 383
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L    ++    D
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL-AYNKFSIKSD 440
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 441 VWAFGVLLWEI 451

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKS 70
           D +L   VLG G +G V+      TG+  A KK+   + K+   +  A+ E K+L ++ S
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLA 125
             I+ L  AF  K +L LV   M   D+   I N +     F  P  I  Y    + GL 
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI-FYTAQIVSGLE 303
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
             H++ +++RD+KP N+L+   G ++++D GLA    +   +         + APELL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PF 211
            ++Y   VD +A G    E++  R PF
Sbjct: 364 -EEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKS 70
           D +L   VLG G +G V+      TG+  A KK+   + K+   +  A+ E K+L ++ S
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLA 125
             I+ L  AF  K +L LV   M   D+   I N +     F  P  I  Y    + GL 
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI-FYTAQIVSGLE 303
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
             H++ +++RD+KP N+L+   G ++++D GLA    +   +         + APELL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PF 211
            ++Y   VD +A G    E++  R PF
Sbjct: 364 -EEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 37/295 (12%)
Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLL 65
           R+LKR   LGEG +G V    Y      TG+ VA+K +   K + G N  A   +EI++L
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL---KPESGGNHIADLKKEIEIL 77
Query: 66  KELKSPHIIELIDAFPHKGN--LHLVFEFMETDL--ETVIRNTNIFLSPADIKSYMQMTL 121
           + L   +I++        G   + L+ EF+ +    E + +N N       +K  +Q+  
Sbjct: 78  RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC- 136
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFAR 175
           KG+ +   +  +HRD+   N+L+ S  Q+K+ DFGL +   +     T +      VF  
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF-- 194
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           WY APE L  +K Y A  DVW+ G    ELL         SD   +       G  T  Q
Sbjct: 195 WY-APECLMQSKFYIAS-DVWSFGVTLHELLT-----YCDSDSSPMALFLKMIG-PTHGQ 246
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                 +    E + +  P      P+  D+   L+ K + + P  R + Q  +E
Sbjct: 247 MTVTRLVNTLKEGKRLPCP------PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKS 70
           D +L   VLG G +G V+      TG+  A KK+   + K+   +  A+ E K+L ++ S
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLA 125
             I+ L  AF  K +L LV   M   D+   I N +     F  P  I  Y    + GL 
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI-FYTAQIVSGLE 303
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
             H++ +++RD+KP N+L+   G ++++D GLA    +   +         + APELL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PF 211
            ++Y   VD +A G    E++  R PF
Sbjct: 364 -EEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKS 70
           D +L   VLG G +G V+      TG+  A KK+   + K+   +  A+ E K+L ++ S
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNI----FLSPADIKSYMQMTLKGLA 125
             I+ L  AF  K +L LV   M   D+   I N +     F  P  I  Y    + GL 
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI-FYTAQIVSGLE 303
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
             H++ +++RD+KP N+L+   G ++++D GLA    +   +         + APELL G
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PF 211
            ++Y   VD +A G    E++  R PF
Sbjct: 364 -EEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 142/353 (40%), Gaps = 65/353 (18%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G++G V  +    T +  A+K ++  +  Q + V  T + +  L    K P + +L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+ V E++   DL   I+    F  P  +    ++ + GL F   K +++R
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI-GLFFLQSKGIIYR 466
Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELLF 184
           D+K +N+++ S G +K+ADFG+ +             G+PD           Y APE++ 
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD-----------YIAPEII- 514
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             + YG  VD WA G +  E+L  +   +G  D D+L +       A P           
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNVAYPK---------- 563
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPL 299
                            S S +A+ +   + T  P  R+       +   EH +F     
Sbjct: 564 -----------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 606
Query: 300 PTEPNKLPRP-----ATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEG 347
                K  +P     A+ R ++  D      P VL PP +      D+  FEG
Sbjct: 607 EKLERKEIQPPYKPKASGRNAENFDRFFTRHPPVLXPPDQEVIRNIDQSEFEG 659

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 37/295 (12%)
Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLL 65
           R+LKR   LGEG +G V    Y      TG+ VA+K +   K + G N  A   +EI++L
Sbjct: 9   RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL---KPESGGNHIADLKKEIEIL 65
Query: 66  KELKSPHIIELIDAFPHKGN--LHLVFEFMETDL--ETVIRNTNIFLSPADIKSYMQMTL 121
           + L   +I++        G   + L+ EF+ +    E + +N N       +K  +Q+  
Sbjct: 66  RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC- 124
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFAR 175
           KG+ +   +  +HRD+   N+L+ S  Q+K+ DFGL +   +     T +      VF  
Sbjct: 125 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF-- 182
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           WY APE L  +K Y A  DVW+ G    ELL         SD   +       G  T  Q
Sbjct: 183 WY-APECLMQSKFYIAS-DVWSFGVTLHELLT-----YCDSDSSPMALFLKMIG-PTHGQ 234
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                 +    E + +  P      P+  D+   L+ K + + P  R + Q  +E
Sbjct: 235 MTVTRLVNTLKEGKRLPCP------PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + +G G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +K+ADFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
           D++ + + LG G++G V      +TG   A+K   K ++ K KE +  T L E ++L+ +
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE-IEHT-LNEKRILQAV 98
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             P +++L  +F    NL++V E+    ++ + +R    F  P   + Y    +    + 
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEYL 157
Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYRA 179
           H   +++RD+KP NL+I   G +K+ DFGLA+        + G+P+           Y A
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE-----------YLA 206
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAEL 205
           PE++  +K Y   VD WA G +  E+
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 141/354 (39%), Gaps = 67/354 (18%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G++G V  +    T +  A+K ++  +  Q + V  T + +  L    K P + +L
Sbjct: 27  VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+ V E++   DL   I+    F  P  +    ++ + GL F   K +++R
Sbjct: 87  HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI-GLFFLQSKGIIYR 145
Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELLF 184
           D+K +N+++ S G +K+ADFG+ +             G+PD           Y APE++ 
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD-----------YIAPEII- 193
Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             + YG  VD WA G +  E+L  +   +G  D D+L +       A P           
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNVAYPK---------- 242
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPL 299
                            S S +A+ +   + T  P  R+       +   EH +F     
Sbjct: 243 -----------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 285
Query: 300 ------PTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEG 347
                   +P   P+   + A     F  +  P VL PP +      D+  FEG
Sbjct: 286 EKLERKEIQPPYKPKACGRNAENFDRFFTRH-PPVLXPPDQEVIRNIDQSEFEG 338

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 9   ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 66
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 67  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFARWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++       F  +      +F  WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF--WY 184
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 185 -APESLTESK-FSVASDVWSFGVVLYELF 211

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 27/202 (13%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G++G V  A   +TG   A+K ++  +  Q + V  T   +  L      P + +L
Sbjct: 30  VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L  V EF+   DL   I+ +  F   A  + Y    +  L F H K +++R
Sbjct: 90  FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRF-DEARARFYAAEIISALMFLHDKGIIYR 148
Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYRAPELLF 184
           D+K +N+L+   G  KLADFG+ +             G+PD           Y APE+L 
Sbjct: 149 DLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD-----------YIAPEIL- 196
Query: 185 GAKQYGAGVDVWAAGCIFAELL 206
               YG  VD WA G +  E+L
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEML 218

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G++G V++  D +TG   A+KK+RL             E+     L SP I+ L  A
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRL-------EVFRAEELMACAGLTSPRIVPLYGA 153
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
                 +++  E +E   L  +++       P D    Y+   L+GL + H + +LH D+
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGCL--PEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
           K +N+L+ S G    L DFG A     PD      +   +      + APE++ G +   
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVCL-QPDGLGKSLLTGDYIPGTETHMAPEVVLG-RSCD 269
Query: 191 AGVDVWAAGCIFAELLN 207
           A VDVW++ C+   +LN
Sbjct: 270 AKVDVWSSCCMMLHMLN 286

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G++G V++  D +TG   A+KK+RL           + E+     L SP I+ L  A
Sbjct: 80  LGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGA 132
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
                 +++  E +E   L  +I+       P D    Y+   L+GL + H + +LH D+
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCL--PEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
           K +N+L+ S G +  L DFG A     PD      +   +      + APE++ G K   
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 248
Query: 191 AGVDVWAAGCIFAELLN 207
           A VD+W++ C+   +LN
Sbjct: 249 AKVDIWSSCCMMLHMLN 265

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G++G V++  D +TG   A+KK+RL             E+     L SP I+ L  A
Sbjct: 82  LGRGSFGEVHRMEDKQTGFQCAVKKVRL-------EVFRAEELMACAGLTSPRIVPLYGA 134
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
                 +++  E +E   L  +++       P D    Y+   L+GL + H + +LH D+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGCL--PEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
           K +N+L+ S G    L DFG A     PD      +   +      + APE++ G +   
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCL-QPDGLGKDLLTGDYIPGTETHMAPEVVLG-RSCD 250
Query: 191 AGVDVWAAGCIFAELLN 207
           A VDVW++ C+   +LN
Sbjct: 251 AKVDVWSSCCMMLHMLN 267

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 17  REVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHI 73
           ++V+GEG +G V KA   K G     AIK+++    + +  +F    E+ L K    P+I
Sbjct: 20  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNI 78
Query: 74  IELIDAFPHKGNLHLVFEF---------------METDLETVIRN-TNIFLSPADIKSYM 117
           I L+ A  H+G L+L  E+               +ETD    I N T   LS   +  + 
Sbjct: 79  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
               +G+ +  +K  +HRD+   N+L+G +   K+ADFGL+R      ++   ++  RW 
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 198
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
               L +    Y    DVW+ G +  E+++
Sbjct: 199 AIESLNYSV--YTTNSDVWSYGVLLWEIVS 226

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 17  REVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHI 73
           ++V+GEG +G V KA   K G     AIK+++    + +  +F    E+ L K    P+I
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNI 88
Query: 74  IELIDAFPHKGNLHLVFEF---------------METDLETVIRN-TNIFLSPADIKSYM 117
           I L+ A  H+G L+L  E+               +ETD    I N T   LS   +  + 
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
               +G+ +  +K  +HRD+   N+L+G +   K+ADFGL+R      ++   ++  RW 
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 208
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
               L +    Y    DVW+ G +  E+++
Sbjct: 209 AIESLNYSV--YTTNSDVWSYGVLLWEIVS 236

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 118/238 (49%), Gaps = 17/238 (7%)
Query: 16  KREVLGEGTYGVVYKA-IDTKTGQT---VAIKKIRLG-KQKEGVNFTALREIKLLKELKS 70
           +++V+G G +G VYK  + T +G+    VAIK ++ G  +K+ V+F  L E  ++ +   
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF--LGEAGIMGQFSH 105
Query: 71  PHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
            +II L         + ++ E+ME   L+  +R  +   S   +   ++    G+ +   
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFG 185
              +HRD+   N+L+ S+   K++DFGL+R+    P+  +T    ++  RW  APE +  
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TAPEAI-S 223
Query: 186 AKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
            +++ +  DVW+ G +  E++    RP+ + S+  + +  I   F   TP   P   Y
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIY 280

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 22/229 (9%)
Query: 1   MAEVDLS--KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFT 57
           + E+DLS  +  A  +   E++G GTYG VYK    KTGQ  AIK + + G ++E +   
Sbjct: 11  LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK-- 68
Query: 58  ALREIKLLKELKSP-HIIELIDAFPHKG------NLHLVFEFMET-DLETVIRNTNIFLS 109
             +EI +LK+     +I     AF  K        L LV EF     +  +I+NT     
Sbjct: 69  --QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 110 PADIKSYM-QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRR 167
             +  +Y+ +  L+GL+  H+  V+HRD+K  N+L+  + ++KL DFG+ A++  +  RR
Sbjct: 127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 186
Query: 168 FTHQVFARWYRAPELLFGAKQ----YGAGVDVWAAGCIFAELLNRRPFL 212
            T  +   ++ APE++   +     Y    D+W+ G    E+    P L
Sbjct: 187 NTF-IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 41  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 160 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 218
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253
           D+WA GCI  +L+   P  +  ++     KI                     +EY + AA
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------------LEYDFPAA 259
Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
                 FP A     DL+ K+   D   R+  ++
Sbjct: 260 -----FFPKAR----DLVEKLLVLDATKRLGCEE 284

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 20  LGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK L+  +I++
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVK 78
Query: 76  LIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
                   G  NL L+ EF+    L   ++     +    +  Y     KG+ +   K  
Sbjct: 79  YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWYRAPELLFGA 186
           +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY APE L  +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY-APESLTES 195
Query: 187 KQYGAGVDVWAAGCIFAELL 206
           K +    DVW+ G +  EL 
Sbjct: 196 K-FSVASDVWSFGVVLYELF 214

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
           D++ + + LG G++G V      +TG   A+K   K ++ K KE +  T L E ++L+ +
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE-IEHT-LNEKRILQAV 98
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             P +++L  +F    NL++V E+    ++ + +R    F  P   + Y    +    + 
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEYL 157
Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYRA 179
           H   +++RD+KP NL+I   G +++ DFGLA+        + G+P+           Y A
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE-----------YLA 206
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAEL 205
           PE++  +K Y   VD WA G +  E+
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 15  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E ME   DL   I      L     +S+    L+ +  CH  
Sbjct: 75  VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 133
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 192 GRSAAVWSLGILLYDMV 208

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 40  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 97
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 98  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 215
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 216 -APESLTESK-FSVASDVWSFGVVLYELF 242

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 34  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 90
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 91  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 149
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 198
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 199 APEIIL-SKGYNKAVDWWALGVLIYEM 224

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 33/202 (16%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKK------IRLGKQKEGVNFTALREIKLLKELKSPHI 73
           LG G++G V+       G+  A+K       +RL KQ E  N   L    +L  +  P I
Sbjct: 14  LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-KQVEHTNDERL----MLSIVTHPFI 68
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I +   F     + ++ +++E  +L +++R +  F +P   K Y       L + H K +
Sbjct: 69  IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV-AKFYAAEVCLALEYLHSKDI 127
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYRAPELLF 184
           ++RD+KP N+L+  +G +K+ DFG A+        + G+PD           Y APE++ 
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD-----------YIAPEVV- 175
Query: 185 GAKQYGAGVDVWAAGCIFAELL 206
             K Y   +D W+ G +  E+L
Sbjct: 176 STKPYNKSIDWWSFGILIYEML 197

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G V++  D +TG   A+KK+RL           + E+     L SP I+ L  A
Sbjct: 82  VGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGA 134
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
                 +++  E +E   L  +I+       P D    Y+   L+GL + H + +LH D+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCL--PEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
           K +N+L+ S G +  L DFG A     PD      +   +      + APE++ G K   
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 250
Query: 191 AGVDVWAAGCIFAELLN 207
           A VD+W++ C+   +LN
Sbjct: 251 AKVDIWSSCCMMLHMLN 267

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 12  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 69
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 70  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 187
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 188 -APESLTESK-FSVASDVWSFGVVLYELF 214

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLK 66
           A+ Y   +V+G G +G V + +  K  Q V     + K  + K+ +   F   R+I    
Sbjct: 74  AEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
              SP +++L  AF     L++V E+M   DL  ++ N ++    A  K Y    +  L 
Sbjct: 133 --NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWA--KFYTAEVVLALD 188
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR------------IFGSPDRRFTHQVF 173
             H   ++HRD+KP+N+L+  HG LKLADFG                 G+PD        
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD-------- 240
Query: 174 ARWYRAPELL---FGAKQYGAGVDVWAAGC-IFAELLNRRPFLQGS 215
              Y +PE+L    G   YG   D W+ G  +F  L+   PF   S
Sbjct: 241 ---YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 16  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 73
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 74  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 191
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 192 -APESLTESK-FSVASDVWSFGVVLYELF 218

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 127/310 (40%), Gaps = 48/310 (15%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
           +G G    V++ ++ K  Q  AIK + L +       +   EI  L +L+  S  II L 
Sbjct: 64  IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           D       +++V E    DL + ++     + P + KSY +  L+ +   H+  ++H D+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 181
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
           KP N LI   G LKL DFG+A     PD        QV A  Y  PE    +  +++ G 
Sbjct: 182 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK 239
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                    DVW+ GCI   +   + PF Q    I+Q+ K+ A        ++PD+    
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ---IINQISKLHAIIDPNHEIEFPDI---- 292
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
                                 D  D+L      DPK RI+  + L H Y      P   
Sbjct: 293 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 331
Query: 304 NKLPRPATKR 313
           N++ +  T+ 
Sbjct: 332 NQMAKGTTEE 341

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G V++  D +TG   A+KK+RL           + E+     L SP I+ L  A
Sbjct: 66  VGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGA 118
Query: 80  FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDM 137
                 +++  E +E   L  +I+       P D    Y+   L+GL + H + +LH D+
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCL--PEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 138 KPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW------YRAPELLFGAKQYG 190
           K +N+L+ S G +  L DFG A     PD      +   +      + APE++ G K   
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCD 234
Query: 191 AGVDVWAAGCIFAELLN 207
           A VD+W++ C+   +LN
Sbjct: 235 AKVDIWSSCCMMLHMLN 251

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 12  DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK    LG+G +G V    Y  +   TG  VA+K+++     +  +F   REI++LK
Sbjct: 9   ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILK 66
Query: 67  ELKSPHIIEL--IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKG 123
            L S  I++   +   P + +L LV E++ +  L   ++     L  + +  Y     KG
Sbjct: 67  ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRA 179
           + +   +  +HRD+   N+L+ S   +K+ADFGLA++       +      Q    WY A
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-A 185
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN 207
           PE L     +    DVW+ G +  EL  
Sbjct: 186 PESL-SDNIFSRQSDVWSFGVVLYELFT 212

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 14  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 71
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 72  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 189
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 190 -APESLTESK-FSVASDVWSFGVVLYELF 216

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 15  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 72
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 73  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 190
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 191 -APESLTESK-FSVASDVWSFGVVLYELF 217

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 13  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 70
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 71  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 188
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 189 -APESLTESK-FSVASDVWSFGVVLYELF 215

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 8   ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 65
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 66  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 183
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 184 -APESLTESK-FSVASDVWSFGVVLYELF 210

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 12  DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK    LG+G +G V    Y  +   TG  VA+K+++     +  +F   REI++LK
Sbjct: 10  ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILK 67
Query: 67  ELKSPHIIEL--IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKG 123
            L S  I++   +   P + +L LV E++ +  L   ++     L  + +  Y     KG
Sbjct: 68  ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRA 179
           + +   +  +HRD+   N+L+ S   +K+ADFGLA++       +      Q    WY A
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-A 186
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN 207
           PE L     +    DVW+ G +  EL  
Sbjct: 187 PESL-SDNIFSRQSDVWSFGVVLYELFT 213

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E+    ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NL+I   G +K+ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 7   ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 64
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 65  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 182
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 183 -APESLTESK-FSVASDVWSFGVVLYELF 209

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 9   ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 66
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 67  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 184
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 185 -APESLTESK-FSVASDVWSFGVVLYELF 211

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 12  DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK    LG+G +G V    Y  +   TG  VA+K+++     +  +F   REI++LK
Sbjct: 22  ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILK 79
Query: 67  ELKSPHIIEL--IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKG 123
            L S  I++   +   P + +L LV E++ +  L   ++     L  + +  Y     KG
Sbjct: 80  ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT----HQVFARWYRA 179
           + +   +  +HRD+   N+L+ S   +K+ADFGLA++       +      Q    WY A
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-A 198
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN 207
           PE L     +    DVW+ G +  EL  
Sbjct: 199 PESL-SDNIFSRQSDVWSFGVVLYELFT 225

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 9   ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 66
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 67  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 184
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 185 -APESLTESK-FSVASDVWSFGVVLYELF 211

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G YG VY  +  K   TVA+K ++     E   F  L+E  ++KE+K P++++L+  
Sbjct: 40  LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEF--LKEAAVMKEIKHPNLVQLLGV 96
Query: 80  FPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKWVLHRDM 137
              +   ++V E+M   +L   +R  N     A +  YM   +   + +  KK  +HRD+
Sbjct: 97  CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDL 156
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVD 194
              N L+G +  +K+ADFGL+R+       +T    A++   + APE L     +    D
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPESL-AYNTFSIKSD 213
Query: 195 VWAAGCIFAEL 205
           VWA G +  E+
Sbjct: 214 VWAFGVLLWEI 224

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 34  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 90
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 91  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 149
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 198
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 199 APEIIL-SKGYNKAVDWWALGVLIYEM 224

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 27  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHT-LNEKRILQA 83
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 84  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 142
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----------YL 191
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 192 APEIIL-SKGYNKAVDWWALGVLIYEM 217

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E+    ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NL+I   G +K+ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 62  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 118
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 177
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 226
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 227 APEIIL-SKGYNKAVDWWALGVLIYEM 252

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G +G+V+        + VAIK IR G   E  +F  + E +++ +L  P +++L   
Sbjct: 15  IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 70
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + LVFEFME   L   +R      +   +        +G+A+  +  V+HRD+ 
Sbjct: 71  CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 130
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+G +  +K++DFG+ R     D ++T     ++   + +PE +F   +Y +  DV
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 187
Query: 196 WAAGCIFAELLN 207
           W+ G +  E+ +
Sbjct: 188 WSFGVLMWEVFS 199

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 27  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 84
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 85  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 202
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 203 -APESLTESK-FSVASDVWSFGVVLYELF 229

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E+    ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NL+I   G +K+ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 27  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 84
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 85  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 202
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 203 -APESLTESK-FSVASDVWSFGVVLYELF 229

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 10/213 (4%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 215
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA 226
           D+WA GCI  +L+   P  +  ++    G IFA
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE----GLIFA 244

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G +G+V+        + VAIK IR G   E  +F  + E +++ +L  P +++L   
Sbjct: 13  IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 68
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + LVFEFME   L   +R      +   +        +G+A+  +  V+HRD+ 
Sbjct: 69  CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 128
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+G +  +K++DFG+ R     D ++T     ++   + +PE +F   +Y +  DV
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 185
Query: 196 WAAGCIFAELLN 207
           W+ G +  E+ +
Sbjct: 186 WSFGVLMWEVFS 197

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 10/213 (4%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSAXKSS 215
Query: 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA 226
           D+WA GCI  +L+   P  +  ++    G IFA
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE----GLIFA 244

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G +G+V+        + VAIK IR G   E  +F  + E +++ +L  P +++L   
Sbjct: 18  IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 73
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + LVFEFME   L   +R      +   +        +G+A+  +  V+HRD+ 
Sbjct: 74  CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 133
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+G +  +K++DFG+ R     D ++T     ++   + +PE +F   +Y +  DV
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 190
Query: 196 WAAGCIFAELLN 207
           W+ G +  E+ +
Sbjct: 191 WSFGVLMWEVFS 202

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 10  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 67
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 68  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------VFARWY 177
           + +   K  +HR++   N+L+ +  ++K+ DFGL ++       +  +      +F  WY
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF--WY 185
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 186 -APESLTESK-FSVASDVWSFGVVLYELF 212

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 137/320 (42%), Gaps = 30/320 (9%)
Query: 6   LSKKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
            S +  D Y L+ +VLGEG +  V   I+  T Q  A+K I   KQ   +     RE+++
Sbjct: 6   FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFREVEM 63
Query: 65  LKELKSP-HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           L + +   +++ELI+ F  +   +LVFE M         +     +  +    +Q     
Sbjct: 64  LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLA---RIFGSPDRRFTHQVF---- 173
           L F H K + HRD+KP N+L     Q   +K+ DFGL    ++ G      T ++     
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCG 183
Query: 174 ARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFG 229
           +  Y APE++      A  Y    D+W+ G I   LL+  P   G    D         G
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD----CGWDRG 239
Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289
            A P+    L       +Y++    P +  +   S  A DL+SK+   D K R++A Q L
Sbjct: 240 EACPACQNMLFESIQEGKYEF----PDKD-WAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
Query: 290 EHRYFSSAPLPTEPNKLPRP 309
           +H +          N LP P
Sbjct: 295 QHPWVQGC---APENTLPTP 311

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 16  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 76  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 135 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 193
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 194 DLWALGCIIYQLVAGLP 210

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIE 75
           R VL EG +  VY+A D  +G+  A+K  RL   +E  N   ++E+  +K+L   P+I++
Sbjct: 33  RRVLAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 76  LIDAFP--------HKGNLHLVFEFMETDLETVIRNTNIF--LSPADIKSYMQMTLKGLA 125
              A           +    L+ E  +  L   ++       LS   +      T + + 
Sbjct: 91  FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 126 FCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLA-RIFGSPDRRFTHQVFAR------- 175
             H++   ++HRD+K  NLL+ + G +KL DFG A  I   PD  ++ Q  A        
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 176 ----WYRAPEL--LFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGS 215
                YR PE+  L+     G   D+WA GCI   L  R+ PF  G+
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 12  DRYLK-REVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK  + LG+G +G V    Y  +   TG+ VA+KK++   ++   +F   REI++LK
Sbjct: 12  ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILK 69
Query: 67  ELKSPHIIELIDAFPHKG--NLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L+  +I++        G  NL L+ E++    L   ++     +    +  Y     KG
Sbjct: 70  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA------RWY 177
           + +   K  +HRD+   N+L+ +  ++K+ DFGL ++   P  +   +V         WY
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWY 187
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL 206
            APE L  +K +    DVW+ G +  EL 
Sbjct: 188 -APESLTESK-FSVASDVWSFGVVLYELF 214

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 43  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 220
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 221 DLWALGCIIYQLVAGLP 237

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 15  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 75  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 134 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 192
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 193 DLWALGCIIYQLVAGLP 209

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 12  DRYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R+LK    LG+G +G V    Y  +   TG  VA+K+++     +  +F   REI++LK
Sbjct: 6   ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILK 63
Query: 67  ELKSPHIIEL--IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKG 123
            L S  I++   +   P +  L LV E++ +  L   ++     L  + +  Y     KG
Sbjct: 64  ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWYRA 179
           + +   +  +HRD+   N+L+ S   +K+ADFGLA++          R   Q    WY A
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-A 182
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN 207
           PE L     +    DVW+ G +  EL  
Sbjct: 183 PESL-SDNIFSRQSDVWSFGVVLYELFT 209

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 39  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 99  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL-TEKSACKSS 216
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 217 DLWALGCIIYQLVAGLP 233

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ +   LG G++G V      +TG   A+K   L KQK    + +  T L E ++ + 
Sbjct: 42  DQFERIRTLGTGSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRIQQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E+    ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +K+ADFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 62  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 118
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 177
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 226
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 227 APEIIL-SKGYNKAVDWWALGVLIYEM 252

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 28/209 (13%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-- 75
           E++G G +G V+KA     G+T  IK+++   +K      A RE+K L +L   +I+   
Sbjct: 17  ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK------AEREVKALAKLDHVNIVHYN 70
Query: 76  -LIDAFPHK-------------GNLHLVFEFMET-DLETVI--RNTNIFLSPADIKSYMQ 118
              D F +                L +  EF +   LE  I  R          ++ + Q
Sbjct: 71  GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
           +T KG+ + H K +++RD+KP+N+ +    Q+K+ DFGL     +  +R   +   R Y 
Sbjct: 131 IT-KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLR-YM 188
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN 207
           +PE +  ++ YG  VD++A G I AELL+
Sbjct: 189 SPEQI-SSQDYGKEVDLYALGLILAELLH 216

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 17  REVLGEGTYGVVYKAIDTKTG--QTVAIKKIR-LGKQKEGVNFTALREIKLLKELKSPHI 73
           ++V+GEG +G V KA   K G     AIK+++    + +  +F    E+ L K    P+I
Sbjct: 27  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNI 85
Query: 74  IELIDAFPHKGNLHLVFEF---------------METDLETVIRN-TNIFLSPADIKSYM 117
           I L+ A  H+G L+L  E+               +ETD    I N T   LS   +  + 
Sbjct: 86  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
               +G+ +  +K  +HR++   N+L+G +   K+ADFGL+R      ++   ++  RW 
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 205
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
               L +    Y    DVW+ G +  E+++
Sbjct: 206 AIESLNYSV--YTTNSDVWSYGVLLWEIVS 233

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 215
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 216 DLWALGCIIYQLVAGLP 232

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K +R  +   K+ V  T + E ++L+  + P
Sbjct: 9   YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +  L  AF     L  V E+    +L   +    +F +    + Y    +  L + H +
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V++RD+K  NL++   G +K+ DFGL +   S             Y APE+L     YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             VD W  G +  E++  R PF   + D ++L                          ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
            +    +R  FP + S +A  LL+ +   DPK R+      A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
           +G G    V++ ++ K  Q  AIK + L +       +   EI  L +L+  S  II L 
Sbjct: 64  IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           D       +++V E    DL + ++     + P + KSY +  L+ +   H+  ++H D+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 181
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
           KP N LI   G LKL DFG+A     PD        QV    Y  PE    +  +++ G 
Sbjct: 182 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                    DVW+ GCI   +   + PF Q    I+Q+ K+ A        ++PD+    
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQI---INQISKLHAIIDPNHEIEFPDI---- 292
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
                                 D  D+L      DPK RI+  + L H Y      P   
Sbjct: 293 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 331
Query: 304 NKLPRPATKR 313
           N++ +  T+ 
Sbjct: 332 NQMAKGTTEE 341

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 13  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 73  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 132 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 190
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 191 DLWALGCIIYQLVAGLP 207

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 39  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 99  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 216
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 217 DLWALGCIIYQLVAGLP 233

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 36  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 213
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 214 DLWALGCIIYQLVAGLP 230

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 215
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 216 DLWALGCIIYQLVAGLP 232

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 215
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 216 DLWALGCIIYQLVAGLP 232

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 14  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 74  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 133 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 191
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 192 DLWALGCIIYQLVAGLP 208

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 36  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 92
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 93  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 151
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 200
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 201 APEIIL-SKGYNKAVDWWALGVLIYEM 226

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 36  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 213
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 214 DLWALGCIIYQLVAGLP 230

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G +G+V+        + VAIK IR G   E  +F  + E +++ +L  P +++L   
Sbjct: 15  IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 70
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + LVFEFME   L   +R      +   +        +G+A+  +  V+HRD+ 
Sbjct: 71  CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLA 130
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+G +  +K++DFG+ R     D ++T     ++   + +PE +F   +Y +  DV
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 187
Query: 196 WAAGCIFAELLN 207
           W+ G +  E+ +
Sbjct: 188 WSFGVLMWEVFS 199

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 36  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA--RWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++     ++     F     Y +PELL   K      
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL-TEKSACKSS 213
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 214 DLWALGCIIYQLVAGLP 230

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K +R  +   K+ V  T + E ++L+  + P
Sbjct: 14  YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 70
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +  L  AF     L  V E+    +L   +    +F +    + Y    +  L + H +
Sbjct: 71  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 129
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V++RD+K  NL++   G +K+ DFGL +   S             Y APE+L     YG
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-EDNDYG 188
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             VD W  G +  E++  R PF   + D ++L                          ++
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 220
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
            +    +R  FP + S +A  LL+ +   DPK R+      A++ +EHR+F S
Sbjct: 221 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 271

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K +R  +   K+ V  T + E ++L+  + P
Sbjct: 9   YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +  L  AF     L  V E+    +L   +    +F +    + Y    +  L + H +
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V++RD+K  NL++   G +K+ DFGL +   S             Y APE+L     YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             VD W  G +  E++  R PF   + D ++L                          ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
            +    +R  FP + S +A  LL+ +   DPK R+      A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K +R  +   K+ V  T + E ++L+  + P
Sbjct: 12  YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 68
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +  L  AF     L  V E+    +L   +    +F +    + Y    +  L + H +
Sbjct: 69  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 127
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V++RD+K  NL++   G +K+ DFGL +   S             Y APE+L     YG
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-EDNDYG 186
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             VD W  G +  E++  R PF   + D ++L                          ++
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 218
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
            +    +R  FP + S +A  LL+ +   DPK R+      A++ +EHR+F S
Sbjct: 219 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 269

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 134/334 (40%), Gaps = 76/334 (22%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL 68
           +Y  +  +G+G+YGVV  AI+ +T    AIK +   K ++ +N   +     E++L+K+L
Sbjct: 27  KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ-INPKDVERIKTEVRLMKKL 85
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM---------------------------------ET 95
             P+I  L + +  +  + LV E                                   E 
Sbjct: 86  HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 96  DLETVIRNTNIFLSPAD-------IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG 148
           + E +  + + F    D       I + M+     L + H + + HRD+KP N L  ++ 
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 149 --QLKLADFGLARIFGSPDR----RFTHQVFARWYRAPELLFGAKQ-YGAGVDVWAAGCI 201
             ++KL DFGL++ F   +       T +    ++ APE+L    + YG   D W+AG +
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 202 FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP 261
              LL       G +D D + ++          + P+           Y    PL     
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQV---LNKKLCFENPN-----------YNVLSPL----- 306
Query: 262 SASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                A DLLS +   +   R  A +AL+H + S
Sbjct: 307 -----ARDLLSNLLNRNVDERFDAMRALQHPWIS 335

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
           +G G    V++ ++ K  Q  AIK + L +       +   EI  L +L+  S  II L 
Sbjct: 64  IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           D       +++V E    DL + ++     + P + KSY +  L+ +   H+  ++H D+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 181
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
           KP N LI   G LKL DFG+A     PD        QV    Y  PE    +  +++ G 
Sbjct: 182 KPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                    DVW+ GCI   +   + PF Q    I+Q+ K+ A        ++PD+    
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ---IINQISKLHAIIDPNHEIEFPDI---- 292
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
                                 D  D+L      DPK RI+  + L H Y      P   
Sbjct: 293 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 331
Query: 304 NKLPRPATKR 313
           N++ +  T+ 
Sbjct: 332 NQMAKGTTEE 341

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K +R  +   K+ V  T + E ++L+  + P
Sbjct: 9   YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +  L  AF     L  V E+    +L   +    +F +    + Y    +  L + H +
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V++RD+K  NL++   G +K+ DFGL +   S             Y APE+L     YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             VD W  G +  E++  R PF   + D ++L                          ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
            +    +R  FP + S +A  LL+ +   DPK R+      A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K +R  +   K+ V  T + E ++L+  + P
Sbjct: 9   YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +  L  AF     L  V E+    +L   +    +F +    + Y    +  L + H +
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V++RD+K  NL++   G +K+ DFGL +   S             Y APE+L     YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             VD W  G +  E++  R PF   + D ++L                          ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
            +    +R  FP + S +A  LL+ +   DPK R+      A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P + +L  +F    NL++V E+    ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NL+I   G +K+ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K +R  +   K+ V  T + E ++L+  + P
Sbjct: 9   YLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRHP 65
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +  L  AF     L  V E+    +L   +    +F +    + Y    +  L + H +
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR 124
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V++RD+K  NL++   G +K+ DFGL +   S             Y APE+L     YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-EDNDYG 183
Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
             VD W  G +  E++  R PF   + D ++L                          ++
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY--NQDHERL--------------------------FE 215
Query: 250 YVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
            +    +R  FP + S +A  LL+ +   DPK R+      A++ +EHR+F S
Sbjct: 216 LILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 62  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 118
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 177
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE-----------YL 226
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 227 APEIIL-SKGYNKAVDWWALGVLIYEM 252

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G +G+V+        + VAIK I+ G   E  +F  + E +++ +L  P +++L   
Sbjct: 35  IGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSED-DF--IEEAEVMMKLSHPKLVQLYGV 90
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + LVFEFME   L   +R      +   +        +G+A+  +  V+HRD+ 
Sbjct: 91  CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 150
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+G +  +K++DFG+ R     D ++T     ++   + +PE +F   +Y +  DV
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 207
Query: 196 WAAGCIFAELLN 207
           W+ G +  E+ +
Sbjct: 208 WSFGVLMWEVFS 219

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E+    ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NL+I   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 38  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 77  IDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +   L   IR    F      + Y    +  L + H K ++HR
Sbjct: 98  YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL-TEKSASKSS 215
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 216 DLWALGCIIYQLVAGLP 232

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 123/306 (40%), Gaps = 35/306 (11%)
Query: 6   LSKKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           L  K  D Y L  E+LGEG Y  V  A+  + G+  A+K I   KQ         RE++ 
Sbjct: 6   LPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE--KQAGHSRSRVFREVET 63
Query: 65  LKELK-SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           L + + + +I+ELI+ F      +LVFE ++              +  +    ++     
Sbjct: 64  LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDR-------RFTHQVF 173
           L F H K + HRD+KP N+L  S  +   +K+ DF L       +          T    
Sbjct: 124 LDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 174 ARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID---QLGKIFA 226
           +  Y APE++      A  Y    D+W+ G +   +L+  P   G    D     G++  
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCR 243
Query: 227 AFGTATPSQWPDLAY-LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA 285
                      +  Y  PD               +   S +A DL+SK+   D K R++A
Sbjct: 244 VCQNKLFESIQEGKYEFPD-------------KDWAHISSEAKDLISKLLVRDAKQRLSA 290
Query: 286 QQALEH 291
            Q L+H
Sbjct: 291 AQVLQH 296

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 20  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 80  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 139 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 197
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 198 DLWALGCIIYQLVAGLP 214

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LG G +GVV++A +       AIK+IRL   +E      +RE+K L +L+ P I+   
Sbjct: 11  QCLGRGGFGVVFEAKNKVDDCNYAIKRIRL-PNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 78  DAFPHKGN------------LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK--- 122
           +A+  K              L++  +    +      N    +   +    + + L+   
Sbjct: 70  NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR------------RFTH 170
            + F H K ++HRD+KP+N+       +K+ DFGL       +             R T 
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           QV  + Y +PE + G   Y   VD+++ G I  ELL
Sbjct: 190 QVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELL 224

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 28  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 84
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 85  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 143
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 192
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 193 APEIIL-SKGYNKAVDWWALGVLIYEM 218

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
           +G G    V++ ++ K  Q  AIK + L +       +   EI  L +L+  S  II L 
Sbjct: 36  IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           D       +++V E    DL + ++     + P + KSY +  L+ +   H+  ++H D+
Sbjct: 95  DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 153
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
           KP N LI   G LKL DFG+A     PD        QV    Y  PE    +  +++ G 
Sbjct: 154 KPANFLIVD-GMLKLIDFGIANQM-QPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                    DVW+ GCI   +   + PF Q    I+Q+ K+ A        ++PD+    
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQI---INQISKLHAIIDPNHEIEFPDI---- 264
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
                                 D  D+L      DPK RI+  + L H Y      P   
Sbjct: 265 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 303
Query: 304 NKLPRPATKR 313
           N++ +  T+ 
Sbjct: 304 NQMAKGTTEE 313

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 35  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 95  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL-TEKSACKSS 212
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 213 DLWALGCIIYQLVAGLP 229

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P + +L  +F    NL++V E+    ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NL+I   G +K+ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      +TG   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 98
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P + +L  +F    NL++V E+    ++ + +R    F  P   + Y    +    +
Sbjct: 99  VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 157
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NL+I   G +K+ DFG A+        + G+P+           Y 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----------YL 206
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 207 APEIIL-SKGYNKAVDWWALGVLIYEM 232

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++  V  A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 35  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 95  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 212
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 213 DLWALGCIIYQLVAGLP 229

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 27/222 (12%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-------SPH 72
           LG G YGVV K     +GQ  A+K+IR           +  + +LL +L         P 
Sbjct: 42  LGRGAYGVVEKXRHVPSGQIXAVKRIR-------ATVNSQEQKRLLXDLDISXRTVDCPF 94
Query: 73  IIELIDAFPHKGNLHLVFEFMETDLE----TVIRNTNIFLSPADIKSYMQMTL-KGLAFC 127
            +    A   +G++ +  E  +T L+     VI        P DI   + +++ K L   
Sbjct: 95  TVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTI--PEDILGKIAVSIVKALEHL 152
Query: 128 HKKW-VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL--- 183
           H K  V+HRD+KP+N+LI + GQ+K  DFG++  +   D         + Y APE +   
Sbjct: 153 HSKLSVIHRDVKPSNVLINALGQVKXCDFGISG-YLVDDVAKDIDAGCKPYXAPERINPE 211
Query: 184 FGAKQYGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKI 224
              K Y    D+W+ G    EL + R P+    +   QL ++
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
           +G G    V++ ++ K  Q  AIK + L +       +   EI  L +L+  S  II L 
Sbjct: 17  IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           D       +++V E    DL + ++     + P + KSY +  L+ +   H+  ++H D+
Sbjct: 76  DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 134
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
           KP N LI   G LKL DFG+A     PD        QV    Y  PE    +  +++ G 
Sbjct: 135 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                    DVW+ GCI   +   + PF Q    I+Q+ K+ A        ++PD+    
Sbjct: 193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ---IINQISKLHAIIDPNHEIEFPDI---- 245
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
                                 D  D+L      DPK RI+  + L H Y      P   
Sbjct: 246 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 284
Query: 304 NKLPRPATKR 313
           N++ +  T+ 
Sbjct: 285 NQMAKGTTEE 294

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
           +G G    V++ ++ K  Q  AIK + L +       +   EI  L +L+  S  II L 
Sbjct: 36  IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           D       +++V E    DL + ++     + P + KSY +  L+ +   H+  ++H D+
Sbjct: 95  DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 153
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
           KP N LI   G LKL DFG+A     PD        QV    Y  PE    +  +++ G 
Sbjct: 154 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                    DVW+ GCI   +   + PF Q    I+Q+ K+ A        ++PD+    
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQI---INQISKLHAIIDPNHEIEFPDI---- 264
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
                                 D  D+L      DPK RI+  + L H Y      P   
Sbjct: 265 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 303
Query: 304 NKLPRPATKR 313
           N++ +  T+ 
Sbjct: 304 NQMAKGTTEE 313

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
           +G G    V++ ++ K  Q  AIK + L +       +   EI  L +L+  S  II L 
Sbjct: 20  IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           D       +++V E    DL + ++     + P + KSY +  L+ +   H+  ++H D+
Sbjct: 79  DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
           KP N LI   G LKL DFG+A     PD        QV    Y  PE    +  +++ G 
Sbjct: 138 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 195
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                    DVW+ GCI   +   + PF Q    I+Q+ K+ A        ++PD+    
Sbjct: 196 SKSKISPKSDVWSLGCILYYMTYGKTPFQQI---INQISKLHAIIDPNHEIEFPDI---- 248
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
                                 D  D+L      DPK RI+  + L H Y      P   
Sbjct: 249 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 287
Query: 304 NKLPRPATKR 313
           N++ +  T+ 
Sbjct: 288 NQMAKGTTEE 297

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 48/310 (15%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELI 77
           +G G    V++ ++ K  Q  AIK + L +       +   EI  L +L+  S  II L 
Sbjct: 16  IGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
           D       +++V E    DL + ++     + P + KSY +  L+ +   H+  ++H D+
Sbjct: 75  DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDL 133
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPEL---LFGAKQYG- 190
           KP N LI   G LKL DFG+A     PD        QV    Y  PE    +  +++ G 
Sbjct: 134 KPANFLIVD-GMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 191
Query: 191 ------AGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                    DVW+ GCI   +   + PF Q    I+Q+ K+ A        ++PD+    
Sbjct: 192 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ---IINQISKLHAIIDPNHEIEFPDI---- 244
Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303
                                 D  D+L      DPK RI+  + L H Y      P   
Sbjct: 245 -------------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV-- 283
Query: 304 NKLPRPATKR 313
           N++ +  T+ 
Sbjct: 284 NQMAKGTTEE 293

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
           LG+G +   ++  D  T +  A   + K  L K  Q+E ++     EI + + L   H++
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 84
Query: 75  ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                F     + +V E         +      L+  + + Y++  + G  + H+  V+H
Sbjct: 85  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+K  NL +    ++K+ DFGLA        R         Y APE+L   K +   VD
Sbjct: 145 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVD 203
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           VW+ GCI   LL  +P  + S   +   +I         +++     +P ++        
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------KKNEYS----IPKHIN------- 245
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                 P A+     L+ KM   DP AR T  + L   +F+S  +P
Sbjct: 246 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 281

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NL+I   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIII-SKGYNKAVDWWALGVLIYEM 231

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE 61
           DL  K  D Y   +V+G G +G V       T +  A+K   K  + K+ +   F   R+
Sbjct: 63  DLRMKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMT 120
           I       SP +++L  AF     L++V E+M   DL  ++ N ++    A  + Y    
Sbjct: 122 IMAFA--NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA--RFYTAEV 177
Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARWYRA 179
           +  L   H    +HRD+KP+N+L+   G LKLADFG           R    V    Y +
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS 237
Query: 180 PELL---FGAKQYGAGVDVWAAGCIFAELL 206
           PE+L    G   YG   D W+ G    E+L
Sbjct: 238 PEVLKSQGGDGYYGRECDWWSVGVFLYEML 267

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
           LG+G +   ++  D  T +  A   + K  L K  Q+E ++     EI + + L   H++
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 104
Query: 75  ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                F     + +V E         +      L+  + + Y++  + G  + H+  V+H
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+K  NL +    ++K+ DFGLA        R         Y APE+L   K +   VD
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVD 223
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           VW+ GCI   LL  +P  + S     L + +        S       +P ++        
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSC----LKETYLRIKKNEYS-------IPKHIN------- 265
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                 P A+     L+ KM   DP AR T  + L   +F+S  +P
Sbjct: 266 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 301

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 149
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 208 GRSAAVWSLGILLYDMV 224

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           ++LGEG++     A +  T +  AIK + +    KE       RE  ++  L  P  ++L
Sbjct: 36  KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
              F     L+    + +  +L   IR    F      + Y    +  L + H K ++HR
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           D+KP N+L+     +++ DFG A++    S   R    V    Y +PELL   K      
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL-TEKSACKSS 213
Query: 194 DVWAAGCIFAELLNRRP 210
           D+WA GCI  +L+   P
Sbjct: 214 DLWALGCIIYQLVAGLP 230

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 30  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 90  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 148
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 207 GRSAAVWSLGILLYDMV 223

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 134
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 193 GRSAAVWSLGILLYDMV 209

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE 61
           DL  K  D Y   +V+G G +G V       T +  A+K   K  + K+ +   F   R+
Sbjct: 68  DLRMKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMT 120
           I       SP +++L  AF     L++V E+M   DL  ++ N ++    A  + Y    
Sbjct: 127 IMAFA--NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA--RFYTAEV 182
Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARWYRA 179
           +  L   H    +HRD+KP+N+L+   G LKLADFG           R    V    Y +
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS 242
Query: 180 PELL---FGAKQYGAGVDVWAAGCIFAELL 206
           PE+L    G   YG   D W+ G    E+L
Sbjct: 243 PEVLKSQGGDGYYGRECDWWSVGVFLYEML 272

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIR------LGKQKEGVNFTALREIKLLKELKSP 71
           E++G G +G VY+A     G  VA+K  R      + +  E V     +E KL   LK P
Sbjct: 13  EIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVR----QEAKLFAMLKHP 66
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADI-KSYMQMTLKGLAFCHK 129
           +II L      + NL LV EF     L  V+    I   P DI  ++     +G+ + H 
Sbjct: 67  NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI---PPDILVNWAVQIARGMNYLHD 123
Query: 130 KW---VLHRDMKPNNLLI--------GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
           +    ++HRD+K +N+LI         S+  LK+ DFGLAR +    +      +A  + 
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA--WM 181
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231
           APE++  A  +  G DVW+ G +  ELL      +G   ID L     A+G A
Sbjct: 182 APEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRG---IDGLA---VAYGVA 227

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  ++
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYQM 231

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
           LG+G +   ++  D  T +  A   + K  L K  Q+E ++     EI + + L   H++
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 102
Query: 75  ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                F     + +V E         +      L+  + + Y++  + G  + H+  V+H
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+K  NL +    ++K+ DFGLA        R         Y APE+L   K +   VD
Sbjct: 163 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVD 221
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           VW+ GCI   LL  +P  + S     L + +        S       +P ++        
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSC----LKETYLRIKKNEYS-------IPKHIN------- 263
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                 P A+     L+ KM   DP AR T  + L   +F+S  +P
Sbjct: 264 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 299

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
           LG+G +   ++  D  T +  A   + K  L K  Q+E ++     EI + + L   H++
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 80
Query: 75  ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                F     + +V E         +      L+  + + Y++  + G  + H+  V+H
Sbjct: 81  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+K  NL +    ++K+ DFGLA        R         Y APE+L   K +   VD
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVD 199
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           VW+ GCI   LL  +P  + S     L + +        S       +P ++        
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSC----LKETYLRIKKNEYS-------IPKHIN------- 241
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                 P A+     L+ KM   DP AR T  + L   +F+S  +P
Sbjct: 242 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 149
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 208 GRSAAVWSLGILLYDMV 224

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
           LG+G +   ++  D  T +  A   + K  L K  Q+E ++     EI + + L   H++
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 80
Query: 75  ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                F     + +V E         +      L+  + + Y++  + G  + H+  V+H
Sbjct: 81  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+K  NL +    ++K+ DFGLA        R         Y APE+L   K +   VD
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVD 199
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           VW+ GCI   LL  +P  + S   +   +I         +++     +P ++        
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------KKNEYS----IPKHIN------- 241
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                 P A+     L+ KM   DP AR T  + L   +F+S  +P
Sbjct: 242 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 161
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 220 GRSAAVWSLGILLYDMV 236

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALRE 61
           DL  K  D Y   +V+G G +G V       T +  A+K   K  + K+ +   F   R+
Sbjct: 68  DLRMKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMT 120
           I       SP +++L  AF     L++V E+M   DL  ++ N ++    A  + Y    
Sbjct: 127 IMAFA--NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA--RFYTAEV 182
Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF---------GLARI---FGSPDRRF 168
           +  L   H    +HRD+KP+N+L+   G LKLADF         G+ R     G+PD   
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD--- 239
Query: 169 THQVFARWYRAPELL---FGAKQYGAGVDVWAAGCIFAELL 206
                   Y +PE+L    G   YG   D W+ G    E+L
Sbjct: 240 --------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 30  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 90  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 148
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 207 GRSAAVWSLGILLYDMV 223

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGLAR+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 70/311 (22%)
Query: 18  EVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALREIKLLKELKS-PHI 73
           ++LG G+ G VV++   +  G+ VA+K++        ++F   AL EIKLL E    P++
Sbjct: 39  KILGYGSSGTVVFQG--SFQGRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNV 89
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK--------SYMQMTLKGLA 125
           I    +      L++  E    +L+ ++ + N+  S  ++K        S ++    G+A
Sbjct: 90  IRYYCSETTDRFLYIALELCNLNLQDLVESKNV--SDENLKLQKEYNPISLLRQIASGVA 147
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ-------------LKLADFGLARIFGSPDRRFTHQV 172
             H   ++HRD+KP N+L+ +  +             + ++DFGL +   S    F   +
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 173 F----ARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNR--RPF-LQGSSDIDQLGK 223
                   +RAPELL  +  ++    +D+++ GC+F  +L++   PF  + S + + +  
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 267
Query: 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283
           IF+           ++  L D            RSL   A+D    L+S+M  +DP  R 
Sbjct: 268 IFS---------LDEMKCLHD------------RSLIAEATD----LISQMIDHDPLKRP 302
Query: 284 TAQQALEHRYF 294
           TA + L H  F
Sbjct: 303 TAMKVLRHPLF 313

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 162
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 221 GRSAAVWSLGILLYDMV 237

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 91  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 149
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 208 GRSAAVWSLGILLYDMV 224

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 162
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 221 GRSAAVWSLGILLYDMV 237

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 15  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 75  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 133
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 192 GRSAAVWSLGILLYDMV 208

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 70/311 (22%)
Query: 18  EVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALREIKLLKELKS-PHI 73
           ++LG G+ G VV++   +  G+ VA+K++        ++F   AL EIKLL E    P++
Sbjct: 39  KILGYGSSGTVVFQG--SFQGRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNV 89
Query: 74  IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK--------SYMQMTLKGLA 125
           I    +      L++  E    +L+ ++ + N+  S  ++K        S ++    G+A
Sbjct: 90  IRYYCSETTDRFLYIALELCNLNLQDLVESKNV--SDENLKLQKEYNPISLLRQIASGVA 147
Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQ-------------LKLADFGLARIFGSPDRRFTHQV 172
             H   ++HRD+KP N+L+ +  +             + ++DFGL +   S    F   +
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 173 F----ARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNR--RPF-LQGSSDIDQLGK 223
                   +RAPELL  +  ++    +D+++ GC+F  +L++   PF  + S + + +  
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 267
Query: 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283
           IF+           ++  L D            RSL   A+D    L+S+M  +DP  R 
Sbjct: 268 IFS---------LDEMKCLHD------------RSLIAEATD----LISQMIDHDPLKRP 302
Query: 284 TAQQALEHRYF 294
           TA + L H  F
Sbjct: 303 TAMKVLRHPLF 313

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 134
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 193 GRSAAVWSLGILLYDMV 209

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 161
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 220 GRSAAVWSLGILLYDMV 236

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 162
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 221 GRSAAVWSLGILLYDMV 237

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 58  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 176
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 235 GRSAAVWSLGILLYDMV 251

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 162
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 221 GRSAAVWSLGILLYDMV 237

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 161
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 220 GRSAAVWSLGILLYDMV 236

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 50  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 168
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 226
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 227 GRSAAVWSLGILLYDMV 243

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 76  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 134
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 193 GRSAAVWSLGILLYDMV 209

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVA---IKKIRLGK--QKEGVNFTALREIKLLKELKSPHII 74
           LG+G +   ++  D  T +  A   + K  L K  Q+E ++     EI + + L   H++
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 78
Query: 75  ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                F     + +V E         +      L+  + + Y++  + G  + H+  V+H
Sbjct: 79  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+K  NL +    ++K+ DFGLA        R         Y APE+L   K +   VD
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVD 197
Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           VW+ GCI   LL  +P  + S   +   +I         +++     +P ++        
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------KKNEYS----IPKHIN------- 239
Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                 P A+     L+ KM   DP AR T  + L   +F+S  +P
Sbjct: 240 ------PVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 18  EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI 73
           +V+G+G++G V    +KA +      V  KK  L K+KE  +  + R + LLK +K P +
Sbjct: 44  KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNV-LLKNVKHPFL 101
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           + L  +F     L+ V +++   +L   ++    FL P   + Y       L + H   +
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR-ARFYAAEIASALGYLHSLNI 160
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--YRAPELLFGAKQYG 190
           ++RD+KP N+L+ S G + L DFGL +   + +   T   F     Y APE+L   + Y 
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVL-HKQPYD 217
Query: 191 AGVDVWAAGCIFAELLNRRP 210
             VD W  G +  E+L   P
Sbjct: 218 RTVDWWCLGAVLYEMLYGLP 237

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 161
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 220 GRSAAVWSLGILLYDMV 236

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 58  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 176
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 235 GRSAAVWSLGILLYDMV 251

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 63  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 181
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 239
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 240 GRSAAVWSLGILLYDMV 256

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 47/316 (14%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 29  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 85
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 86  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 145
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 206 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 262
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
              PD+ +    + +QY   P +R  F       L+++S +           ++ +E  +
Sbjct: 263 DNCPDMLFELMRMCWQY--NPKMRPSF-------LEIISSI-----------KEEMEPGF 302
Query: 294 FSSAPLPTEPNKLPRP 309
              +   +E NKLP P
Sbjct: 303 REVSFYYSEENKLPEP 318

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 47/316 (14%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 29  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 85
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 86  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 206 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 262
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
              PD+ +    + +QY   P +R  F       L+++S +           ++ +E  +
Sbjct: 263 DNCPDMLFELMRMCWQY--NPKMRPSF-------LEIISSI-----------KEEMEPGF 302
Query: 294 FSSAPLPTEPNKLPRP 309
              +   +E NKLP P
Sbjct: 303 REVSFYYSEENKLPEP 318

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNX 129
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 188 GRSAAVWSLGILLYDMV 204

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 38  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 98  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 156
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 214
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 215 GRSAAVWSLGILLYDMV 231

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 14  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 74  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 132
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 190
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 191 GRSAAVWSLGILLYDMV 207

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 138/321 (42%), Gaps = 32/321 (9%)
Query: 6   LSKKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
            S +  D Y L+ +VLGEG +  V   I+  T Q  A+K I   KQ   +     RE+++
Sbjct: 6   FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFREVEM 63
Query: 65  LKELKSP-HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           L + +   +++ELI+ F  +   +LVFE M         +     +  +    +Q     
Sbjct: 64  LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLA---RIFGSPDRRFTHQVF---- 173
           L F H K + HRD+KP N+L     Q   +K+ DF L    ++ G      T ++     
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 174 ARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFG 229
           +  Y APE++      A  Y    D+W+ G I   LL+  P   G    D         G
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD----CGWDRG 239
Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289
            A P+    L       +Y++    P +  +   S  A DL+SK+   D K R++A Q L
Sbjct: 240 EACPACQNMLFESIQEGKYEF----PDKD-WAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
Query: 290 EHRYF-SSAPLPTEPNKLPRP 309
           +H +    AP     N LP P
Sbjct: 295 QHPWVQGCAP----ENTLPTP 311

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 49  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 106
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 107 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 166
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 224
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 254

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 129
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 188 GRSAAVWSLGILLYDMV 204

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 22  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 79
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 80  IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 197
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 227

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 62/323 (19%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           EV+G G +GVV KA      + VAIK+I    +++      + E++ L  +  P+I++L 
Sbjct: 15  EVVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAF----IVELRQLSRVNHPNIVKLY 68
Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNI--FLSPADIKSYMQMTLKGLAFCHK---KW 131
            A  +   + LV E+ E   L  V+       + + A   S+     +G+A+ H    K 
Sbjct: 69  GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 132 VLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
           ++HRD+KP NLL+ + G  LK+ DFG A    +     T+   +  + APE +F    Y 
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---HMTNNKGSAAWMAPE-VFEGSNYS 182
Query: 191 AGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLG----KIFAAFGTATPSQWPDLAYLPDY 245
              DV++ G I  E++ RR PF       D++G    +I  A    T             
Sbjct: 183 EKCDVFSWGIILWEVITRRKPF-------DEIGGPAFRIMWAVHNGT------------- 222
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE-----HRYFSSAPLP 300
                   PPL    P   +    L+++ ++ DP  R + ++ ++      RYF  A  P
Sbjct: 223 -------RPPLIKNLPKPIE---SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272
Query: 301 TE---PNKLPRPATKRASKASDF 320
            +    + LP     R     DF
Sbjct: 273 LQYPCQHSLPPGEDGRVEPYVDF 295

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PH 72
           +LG G +G VY  I       VAIK +   R+    E  N T +  E+ LLK++ S    
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I L+D F    +  L+ E  E   DL   I      L     +S+    L+ +  CH  
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC 129
Query: 131 WVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
            VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE +   + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 190 GAGVDVWAAGCIFAELL 206
           G    VW+ G +  +++
Sbjct: 188 GRSAAVWSLGILLYDMV 204

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 269 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEK 323
Query: 73  IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M     L+ +   T  +L    +         G+A+  + 
Sbjct: 324 LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 439
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY--LPD 244
            ++    DVW+ G +  EL  +             G++           +P +    + D
Sbjct: 440 -RFTIKSDVWSFGILLTELTTK-------------GRV----------PYPGMVNREVLD 475
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  +P+ R T +  QA    YF+S    TE
Sbjct: 476 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 526
Query: 303 PNKLP 307
           P   P
Sbjct: 527 PQXQP 531

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 41/222 (18%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-- 75
           E++G G +G V+KA     G+T  I++++   +K      A RE+K L +L   +I+   
Sbjct: 18  ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEK------AEREVKALAKLDHVNIVHYN 71
Query: 76  -LIDAFPHK--------------------------GNLHLVFEFMET-DLETVI--RNTN 105
              D F +                             L +  EF +   LE  I  R   
Sbjct: 72  GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 106 IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165
                  ++ + Q+T KG+ + H K ++HRD+KP+N+ +    Q+K+ DFGL     +  
Sbjct: 132 KLDKVLALELFEQIT-KGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           +R   +   R Y +PE +  ++ YG  VD++A G I AELL+
Sbjct: 191 KRTRSKGTLR-YMSPEQI-SSQDYGKEVDLYALGLILAELLH 230

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 39  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 96
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 97  IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 156
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 214
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 215 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 244

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+           Y 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----------YL 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           AP ++  +K Y   VD WA G +  E+
Sbjct: 206 APAIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G +G+V+        + VAIK IR G   E  +F  + E +++ +L  P +++L   
Sbjct: 16  IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEE-DF--IEEAEVMMKLSHPKLVQLYGV 71
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + LV EFME   L   +R      +   +        +G+A+  +  V+HRD+ 
Sbjct: 72  CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 131
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+G +  +K++DFG+ R     D ++T     ++   + +PE +F   +Y +  DV
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDV 188
Query: 196 WAAGCIFAELLN 207
           W+ G +  E+ +
Sbjct: 189 WSFGVLMWEVFS 200

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLKELKSPHIIELI 77
           VLG+G +G V       TG+  A KK+   + K+      AL E ++L+++ S  ++ L 
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSP-ADIKSYMQMTLKGLAFCHKKWVLHR 135
            A+  K  L LV   M   DL+  I +      P A    Y      GL   H++ +++R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP N+L+  HG ++++D GLA +     +    +V    Y APE++   ++Y    D 
Sbjct: 311 DLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDW 368
Query: 196 WAAGCIFAELL-NRRPFLQGSSDI 218
           WA GC+  E++  + PF Q    I
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKI 392

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 62/323 (19%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           EV+G G +GVV KA      + VAIK+I    +++      + E++ L  +  P+I++L 
Sbjct: 14  EVVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAF----IVELRQLSRVNHPNIVKLY 67
Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNI--FLSPADIKSYMQMTLKGLAFCHK---KW 131
            A  +   + LV E+ E   L  V+       + + A   S+     +G+A+ H    K 
Sbjct: 68  GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 132 VLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
           ++HRD+KP NLL+ + G  LK+ DFG A    +     T+   +  + APE +F    Y 
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---HMTNNKGSAAWMAPE-VFEGSNYS 181
Query: 191 AGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLG----KIFAAFGTATPSQWPDLAYLPDY 245
              DV++ G I  E++ RR PF       D++G    +I  A    T             
Sbjct: 182 EKCDVFSWGIILWEVITRRKPF-------DEIGGPAFRIMWAVHNGT------------- 221
Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE-----HRYFSSAPLP 300
                   PPL    P   +    L+++ ++ DP  R + ++ ++      RYF  A  P
Sbjct: 222 -------RPPLIKNLPKPIE---SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271
Query: 301 TE---PNKLPRPATKRASKASDF 320
            +    + LP     R     DF
Sbjct: 272 LQYPCQHSLPPGEDGRVEPYVDF 294

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           V+G G+Y  V      KT +  A+K ++  L    E +++    +    +    P ++ L
Sbjct: 16  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
              F  +  L  V E++              L     + Y       L + H++ +++RD
Sbjct: 76  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 135
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +K +N+L+ S G +KL D+G+ +    P    +       Y APE+L G + YG  VD W
Sbjct: 136 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWW 194
Query: 197 AAGCIFAELL-NRRPF-LQGSSD 217
           A G +  E++  R PF + GSSD
Sbjct: 195 ALGVLMFEMMAGRSPFDIVGSSD 217

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           V+G G+Y  V      KT +  A+K ++  L    E +++    +    +    P ++ L
Sbjct: 27  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
              F  +  L  V E++              L     + Y       L + H++ +++RD
Sbjct: 87  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 146
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +K +N+L+ S G +KL D+G+ +    P    +       Y APE+L G + YG  VD W
Sbjct: 147 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWW 205
Query: 197 AAGCIFAELL-NRRPF-LQGSSD 217
           A G +  E++  R PF + GSSD
Sbjct: 206 ALGVLMFEMMAGRSPFDIVGSSD 228

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           V+G G+Y  V      KT +  A+K ++  L    E +++    +    +    P ++ L
Sbjct: 12  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
              F  +  L  V E++              L     + Y       L + H++ +++RD
Sbjct: 72  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 131
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +K +N+L+ S G +KL D+G+ +    P    +       Y APE+L G + YG  VD W
Sbjct: 132 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWW 190
Query: 197 AAGCIFAELL-NRRPF-LQGSSD 217
           A G +  E++  R PF + GSSD
Sbjct: 191 ALGVLMFEMMAGRSPFDIVGSSD 213

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLKELKSPHIIELI 77
           VLG+G +G V       TG+  A KK+   + K+      AL E ++L+++ S  ++ L 
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSP-ADIKSYMQMTLKGLAFCHKKWVLHR 135
            A+  K  L LV   M   DL+  I +      P A    Y      GL   H++ +++R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           D+KP N+L+  HG ++++D GLA +     +    +V    Y APE++   ++Y    D 
Sbjct: 311 DLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDW 368
Query: 196 WAAGCIFAELL-NRRPFLQGSSDI 218
           WA GC+  E++  + PF Q    I
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKI 392

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 23  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 79
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 80  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 200 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 256
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+ +    + +QY   P +R  F
Sbjct: 257 DNCPDMLFELMRMCWQY--NPKMRPSF 281

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 52/311 (16%)
Query: 10  VADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKE 67
           V D Y L ++VLG G  G V +    +TGQ  A+K +    K ++ V+          + 
Sbjct: 7   VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHH-------WQA 59
Query: 68  LKSPHIIELIDAFP--HKGN--LHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTL 121
              PHI+ ++D +   H G   L ++ E ME       +    +   +  +    M+   
Sbjct: 60  SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 119
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYR 178
             + F H   + HRD+KP NLL  S  +   LKL DFG A+   +         +  +Y 
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYV 177
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKI----FAAFGTATP 233
           APE+L G ++Y    D+W+ G I   LL    PF   +      G         +G   P
Sbjct: 178 APEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 236
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
            +W ++                        S+DA  L+  +   DP  R+T  Q + H +
Sbjct: 237 -EWSEV------------------------SEDAKQLIRLLLKTDPTERLTITQFMNHPW 271
Query: 294 FS-SAPLPTEP 303
            + S  +P  P
Sbjct: 272 INQSMVVPQTP 282

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 52/311 (16%)
Query: 10  VADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKE 67
           V D Y L ++VLG G  G V +    +TGQ  A+K +    K ++ V+          + 
Sbjct: 26  VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHH-------WQA 78
Query: 68  LKSPHIIELIDAFP--HKGN--LHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTL 121
              PHI+ ++D +   H G   L ++ E ME       +    +   +  +    M+   
Sbjct: 79  SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 138
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYR 178
             + F H   + HRD+KP NLL  S  +   LKL DFG A+   +         +  +Y 
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYV 196
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKI----FAAFGTATP 233
           APE+L G ++Y    D+W+ G I   LL    PF   +      G         +G   P
Sbjct: 197 APEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
            +W ++                        S+DA  L+  +   DP  R+T  Q + H +
Sbjct: 256 -EWSEV------------------------SEDAKQLIRLLLKTDPTERLTITQFMNHPW 290
Query: 294 FS-SAPLPTEP 303
            + S  +P  P
Sbjct: 291 INQSMVVPQTP 301

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLG---KQKEGVNFTALREIKL 64
           RYLK+   LGEG +G V    Y   +  TG+ VA+K ++     + + G      +EI +
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWK----QEIDI 86
Query: 65  LKELKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL 121
           L+ L   HII+        G  +L LV E++    L   +   +I L  A +  + Q   
Sbjct: 87  LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQIC 144
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQ----VFAR 175
           +G+A+ H +  +HRD+   N+L+ +   +K+ DFGLA+    G    R        VF  
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF-- 202
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR 208
           WY APE L   K Y A  DVW+ G    ELL  
Sbjct: 203 WY-APECLKEYKFYYAS-DVWSFGVTLYELLTH 233

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 74/328 (22%)
Query: 5   DLSKKVADRYLKREVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALRE 61
           +  + + +  +  ++LG G+ G VV++   +  G+ VA+K++        ++F   AL E
Sbjct: 8   NFEQSLKNLVVSEKILGYGSSGTVVFQG--SFQGRPVAVKRML-------IDFCDIALME 58
Query: 62  IKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK------ 114
           IKLL E    P++I    +      L++  E    +L+ ++ + N+  S  ++K      
Sbjct: 59  IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV--SDENLKLQKEYN 116
Query: 115 --SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-------------QLKLADFGLAR 159
             S ++    G+A  H   ++HRD+KP N+L+ +               ++ ++DFGL +
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 160 IFGSPDRRFTHQVF----ARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-- 207
              S    F   +        +RAPELL  +      ++    +D+++ GC+F  +L+  
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 208 RRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDD 266
           + PF  + S + + +  IF+           ++  L D            RSL   A+  
Sbjct: 237 KHPFGDKYSRESNIIRGIFS---------LDEMKCLHD------------RSLIAEAT-- 273
Query: 267 ALDLLSKMFTYDPKARITAQQALEHRYF 294
             DL+S+M  +DP  R TA + L H  F
Sbjct: 274 --DLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKE 67
           D++ + + LG G++G V      ++G   A+K   L KQK    + +  T L E ++L+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHT-LNEKRILQA 97
Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +++L  +F    NL++V E++   ++ + +R    F  P   + Y    +    +
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLTFEY 156
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR--------IFGSPDRRFTHQVFARWYR 178
            H   +++RD+KP NLLI   G +++ DFG A+        + G+P+             
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-----------L 205
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAEL 205
           APE++  +K Y   VD WA G +  E+
Sbjct: 206 APEIIL-SKGYNKAVDWWALGVLIYEM 231

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 18  EVLGEGTYGVVY---KAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELK-SP 71
           +VLG G YG V+   K     TG+  A+K ++     QK         E ++L+ ++ SP
Sbjct: 60  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            ++ L  AF  +  LHL+ +++   +L T +     F +  +++ Y+   +  L   HK 
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF-TEHEVQIYVGEIVLALEHLHKL 178
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLFGAKQ- 188
            +++RD+K  N+L+ S+G + L DFGL++ F + +    +       Y AP+++ G    
Sbjct: 179 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG 238
Query: 189 YGAGVDVWAAGCIFAELLN 207
           +   VD W+ G +  ELL 
Sbjct: 239 HDKAVDWWSLGVLMYELLT 257

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 74/328 (22%)
Query: 5   DLSKKVADRYLKREVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALRE 61
           +  + + +  +  ++LG G+ G VV++   +  G+ VA+K++        ++F   AL E
Sbjct: 8   NFEQSLKNLVVSEKILGYGSSGTVVFQG--SFQGRPVAVKRML-------IDFCDIALME 58
Query: 62  IKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIK------ 114
           IKLL E    P++I    +      L++  E    +L+ ++ + N+  S  ++K      
Sbjct: 59  IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV--SDENLKLQKEYN 116
Query: 115 --SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-------------QLKLADFGLAR 159
             S ++    G+A  H   ++HRD+KP N+L+ +               ++ ++DFGL +
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 160 IFGSPDRRFTHQVF----ARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-- 207
              S    F   +        +RAPELL  +      ++    +D+++ GC+F  +L+  
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 208 RRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDD 266
           + PF  + S + + +  IF+           ++  L D            RSL   A+  
Sbjct: 237 KHPFGDKYSRESNIIRGIFS---------LDEMKCLHD------------RSLIAEAT-- 273
Query: 267 ALDLLSKMFTYDPKARITAQQALEHRYF 294
             DL+S+M  +DP  R TA + L H  F
Sbjct: 274 --DLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           V+G G+Y  V      KT +  A++ ++  L    E +++    +    +    P ++ L
Sbjct: 59  VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
              F  +  L  V E++              L     + Y       L + H++ +++RD
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 178
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVW 196
           +K +N+L+ S G +KL D+G+ +    P    +       Y APE+L G + YG  VD W
Sbjct: 179 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWW 237
Query: 197 AAGCIFAELL-NRRPF-LQGSSD 217
           A G +  E++  R PF + GSSD
Sbjct: 238 ALGVLMFEMMAGRSPFDIVGSSD 260

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 22  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 78
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 79  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 138
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 199 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 255
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+ +    + +QY   P +R  F
Sbjct: 256 DNCPDMLFELMRMCWQY--NPKMRPSF 280

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGA 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 20  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 76
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 77  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 136
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 197 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 253
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+ +    + +QY   P +R  F
Sbjct: 254 DNCPDMLFELMRMCWQY--NPKMRPSF 278

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 13  RYLKREV-LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           R+LK ++ +G G++  VYK +DT+T   VA  +++  K  +        E + LK L+ P
Sbjct: 26  RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHP 85
Query: 72  HIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +I+   D++      K  + LV E   +  L+T ++   +      ++S+ +  LKGL F
Sbjct: 86  NIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV-LRSWCRQILKGLQF 144
Query: 127 CHKKW--VLHRDMKPNNLLI-GSHGQLKLADFGLAR---------IFGSPDRRFTHQVFA 174
            H +   ++HRD+K +N+ I G  G +K+ D GLA          + G+P+         
Sbjct: 145 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE--------- 195
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAG-CIFAELLNRRPF 211
             + APE     ++Y   VDV+A G C      +  P+
Sbjct: 196 --FXAPEXY--EEKYDESVDVYAFGXCXLEXATSEYPY 229

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 16  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 72
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 73  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 193 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 249
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+ +    + +QY   P +R  F
Sbjct: 250 DNCPDMLFELMRMCWQY--NPKMRPSF 274

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 23  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 79
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 80  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 200 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 256
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+ +    + +QY   P +R  F
Sbjct: 257 DNCPDMLFELMRMCWQY--NPKMRPSF 281

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 22  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 78
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 79  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 138
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 199 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 255
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+ +    + +QY   P +R  F
Sbjct: 256 DNCPDMLFELMRMCWQY--NPKMRPSF 280

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 19  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 75
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 76  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 135
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 136 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 196 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 252
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+ +    + +QY   P +R  F
Sbjct: 253 DNCPDMLFELMRMCWQY--NPKMRPSF 277

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 226
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 256

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 20  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 78
Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 79  HVCRLL-GICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 195
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 196 IYTHQSDVWSYGVTVWELMT 215

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 9   LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 63
Query: 73  IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +++L           +  +  KG+L    +F++ ++   +R   +    A I S      
Sbjct: 64  LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 114
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
            G+A+  +   +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + 
Sbjct: 115 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 171
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           APE  L+G  ++    DVW+ G +  EL    R P+  G  + + L              
Sbjct: 172 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 214
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
                   D VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    Y
Sbjct: 215 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 261
Query: 294 FSSAPLPTEPNKLP 307
           F+S    TEP   P
Sbjct: 262 FTS----TEPQYQP 271

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      + +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 22  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 79
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 80  IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  +PE +   ++
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAI-AYRK 197
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+ + S+
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSN 227

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 14  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 66
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 67  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTEPCYTPYYVA 185
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 186 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 215

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEK 240
Query: 73  IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M     L+ +   T  +L    +         G+A+  + 
Sbjct: 241 LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 356
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY--LPD 244
            ++    DVW+ G +  EL  +             G++           +P +    + D
Sbjct: 357 -RFTIKSDVWSFGILLTELTTK-------------GRV----------PYPGMVNREVLD 392
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  +P+ R T +  QA    YF+S    TE
Sbjct: 393 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 443
Query: 303 PNKLP 307
           P   P
Sbjct: 444 PQXQP 448

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLL 65
           RYLK+   LGEG +G V    Y   +  TG+ VA+K ++   G Q         +EI +L
Sbjct: 14  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS---GWKQEIDIL 70
Query: 66  KELKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK 122
           + L   HII+       +G  +L LV E++    L   +   +I L  A +  + Q   +
Sbjct: 71  RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICE 128
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARW 176
           G+A+ H +  +HR++   N+L+ +   +K+ DFGLA+    P+    ++V         W
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFW 186
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNR 208
           Y APE L   K Y A  DVW+ G    ELL  
Sbjct: 187 Y-APECLKEYKFYYAS-DVWSFGVTLYELLTH 216

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 20  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M   + L+ +      +L    +         G+A+  + 
Sbjct: 75  LVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 190
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 191 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 226
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    YF+S    TE
Sbjct: 227 QVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS----TE 277
Query: 303 PNKLP 307
           P   P
Sbjct: 278 PQYQP 282

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 11  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 65
Query: 73  IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +++L           +  +  KG+L    +F++ ++   +R   +    A I S      
Sbjct: 66  LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 116
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
            G+A+  +   +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + 
Sbjct: 117 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 173
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           APE  L+G  ++    DVW+ G +  EL    R P+  G  + + L              
Sbjct: 174 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 216
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
                   D VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    Y
Sbjct: 217 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 263
Query: 294 FSSAPLPTEPNKLP 307
           F+S    TEP   P
Sbjct: 264 FTS----TEPQYQP 273

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 20  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73  IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M     L+ +      +L    +         G+A+  + 
Sbjct: 75  LVQLY-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 190
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 191 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 226
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    YF+S    TE
Sbjct: 227 QVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS----TE 277
Query: 303 PNKLP 307
           P   P
Sbjct: 278 PQYQP 282

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 14  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 70
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 71  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 131 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 191 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 247
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+      + +QY   P +R  F
Sbjct: 248 DNCPDMLLELMRMCWQY--NPKMRPSF 272

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           RYLK+   LGEG +G V    Y   +  TG+ VA+K ++ G   + +     REI++L+ 
Sbjct: 9   RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ-LRSGWQREIEILRT 67
Query: 68  LKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L   HI++       +G  ++ LV E++    L   +    + L  A +  + Q   +G+
Sbjct: 68  LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGM 125
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYR 178
           A+ H +  +HR +   N+L+ +   +K+ DFGLA+    P+    ++V         WY 
Sbjct: 126 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWY- 182
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN 207
           APE L   K Y A  DVW+ G    ELL 
Sbjct: 183 APECLKECKFYYAS-DVWSFGVTLYELLT 210

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 51  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 107
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 108 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 167
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   R
Sbjct: 168 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 228 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 284
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+ +    + +QY   P +R  F
Sbjct: 285 DNCPDMLFELMRMCWQY--NPKMRPSF 309

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 23  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 81
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 82  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 198
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 199 IYTHQSDVWSYGVTVWELMT 218

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 20  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73  IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +++L           +  +  KG+L    +F++ ++   +R   +    A I S      
Sbjct: 75  LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 125
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
            G+A+  +   +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + 
Sbjct: 126 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 182
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           APE  L+G  ++    DVW+ G +  EL    R P+  G  + + L              
Sbjct: 183 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 225
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
                   D VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    Y
Sbjct: 226 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 294 FSSAPLPTEPNKLP 307
           F+S    TEP   P
Sbjct: 273 FTS----TEPQYQP 282

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 20  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 78
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 79  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 195
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 196 IYTHQSDVWSYGVTVWELMT 215

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           RYLK+   LGEG +G V    Y   +  TG+ VA+K ++ G   + +     REI++L+ 
Sbjct: 8   RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ-LRSGWQREIEILRT 66
Query: 68  LKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L   HI++       +G  ++ LV E++    L   +    + L  A +  + Q   +G+
Sbjct: 67  LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGM 124
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYR 178
           A+ H +  +HR +   N+L+ +   +K+ DFGLA+    P+    ++V         WY 
Sbjct: 125 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWY- 181
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN 207
           APE L   K Y A  DVW+ G    ELL 
Sbjct: 182 APECLKECKFYYAS-DVWSFGVTLYELLT 209

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG-VNFTALREIKL-LKELKSPH 72
           K +VLG G +G V+K +    G+++ I   I++ + K G  +F A+ +  L +  L   H
Sbjct: 35  KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I+ L+   P   +L LV +++    L   +R     L P  + ++     KG+ +  +  
Sbjct: 95  IVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           ++HR++   N+L+ S  Q+++ADFG+A +    D++  +   +   +W     + FG  +
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG--K 211
Query: 189 YGAGVDVWAAGCIFAELLN 207
           Y    DVW+ G    EL+ 
Sbjct: 212 YTHQSDVWSYGVTVWELMT 230

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 21  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 80  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEK 240
Query: 73  IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M     L+ +   T  +L    +         G+A+  + 
Sbjct: 241 LVQLY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 356
Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY--LPD 244
            ++    DVW+ G +  EL  +             G++           +P +    + D
Sbjct: 357 -RFTIKSDVWSFGILLTELTTK-------------GRV----------PYPGMVNREVLD 392
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  +P+ R T +  QA    YF+S    TE
Sbjct: 393 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 443
Query: 303 PNKLP 307
           P   P
Sbjct: 444 PQXQP 448

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 13  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 67
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M   + L+ +   T  +L    +         G+A+  + 
Sbjct: 68  LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 183
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 184 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 219
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  +P+ R T +  QA    YF+S    TE
Sbjct: 220 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 270
Query: 303 PNKLP 307
           P   P
Sbjct: 271 PQYQP 275

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 13  RYLKR-EVLGEGTYGVV----YKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLL 65
           RYLK+   LGEG +G V    Y   +  TG+ VA+K ++   G Q         +EI +L
Sbjct: 14  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS---GWKQEIDIL 70
Query: 66  KELKSPHIIELIDAFPHKG--NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK 122
           + L   HII+       +G  +L LV E++    L   +   +I L  A +  + Q   +
Sbjct: 71  RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICE 128
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARW 176
           G+A+ H +  +HR++   N+L+ +   +K+ DFGLA+    P+    ++V         W
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFW 186
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNR 208
           Y APE L   K Y A  DVW+ G    ELL  
Sbjct: 187 Y-APECLKEYKFYYAS-DVWSFGVTLYELLTH 216

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 22  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 80
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 81  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 197
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 198 IYTHQSDVWSYGVTVWELMT 217

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 21  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 73
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 74  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 192
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 193 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 222

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 78  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 17  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 71
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M   + L+ +   T  +L    +         G+A+  + 
Sbjct: 72  LVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 187
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 188 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 223
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  +P+ R T +  QA    YF+S    TE
Sbjct: 224 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 274
Query: 303 PNKLP 307
           P   P
Sbjct: 275 PQYQP 279

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 22  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 74
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 75  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 193
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 194 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 223

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 15  LKR-EVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG--VNFTALREIKLLKELKS 70
           LKR +VLG G +G VYK I    G+TV I   I++  +  G   N   + E  ++  +  
Sbjct: 17  LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 71  PHIIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           PH++ L+        + LV + M     LE V  + +   S   +   +Q+  KG+ +  
Sbjct: 77  PHLVRLL-GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA-KGMMYLE 134
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFG 185
           ++ ++HRD+   N+L+ S   +K+ DFGLAR+    ++ +     ++  +W     + + 
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY- 193
Query: 186 AKQYGAGVDVWAAGCIFAELLN 207
            +++    DVW+ G    EL+ 
Sbjct: 194 -RKFTHQSDVWSYGVTIWELMT 214

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 20  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 72
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 73  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 191
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 192 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 221

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 66/303 (21%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K  K  +   K+ V  T L E ++L+  + P
Sbjct: 152 YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 208
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
            +  L  +F     L  V E+    +L   +    +F S    + Y    +  L + H +
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 267
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYR 178
           K V++RD+K  NL++   G +K+ DFGL +             G+P+           Y 
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE-----------YL 316
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE+L     YG  VD W  G +  E++  R PF   + D ++L ++        P    
Sbjct: 317 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP---- 369
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHR 292
                              R+L P A      LLS +   DPK R+      A++ ++HR
Sbjct: 370 -------------------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406
Query: 293 YFS 295
           +F+
Sbjct: 407 FFA 409

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 66/303 (21%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K  K  +   K+ V  T L E ++L+  + P
Sbjct: 155 YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 211
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
            +  L  +F     L  V E+    +L   +    +F S    + Y    +  L + H +
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 270
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYR 178
           K V++RD+K  NL++   G +K+ DFGL +             G+P+           Y 
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE-----------YL 319
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE+L     YG  VD W  G +  E++  R PF   + D ++L ++        P    
Sbjct: 320 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP---- 372
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHR 292
                              R+L P A      LLS +   DPK R+      A++ ++HR
Sbjct: 373 -------------------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHR 409
Query: 293 YFS 295
           +F+
Sbjct: 410 FFA 412

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 60  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 112
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 231
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 232 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 261

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 30  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 82
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 83  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 201
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 202 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 231

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 2   AEVDLSKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFT 57
             ++ +K++   Y+K  EV+G G +G V +      G+    VAIK ++ G   E     
Sbjct: 3   GSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-GGYTERQRRE 61
Query: 58  ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSY 116
            L E  ++ + + P+II L     +   + ++ EFME   L++ +R  +   +   +   
Sbjct: 62  FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH---- 170
           ++    G+ +  +   +HRD+   N+L+ S+   K++DFGL+R     S D  +T     
Sbjct: 122 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           ++  RW  APE +   +++ +  D W+ G +  E+++   RP+   S+
Sbjct: 182 KIPIRW-TAPEAI-AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 20  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M   + L+ +      +L    +         G+A+  + 
Sbjct: 75  LVQLY-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 190
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 191 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 226
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    YF+S    TE
Sbjct: 227 QVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS----TE 277
Query: 303 PNKLP 307
           P   P
Sbjct: 278 PQYQP 282

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 186 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEK 240
Query: 73  IIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M     L+ +   T  +L    +         G+A+  + 
Sbjct: 241 LVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYG- 356
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 357 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 392
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  +P+ R T +  QA    YF+S    TE
Sbjct: 393 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 443
Query: 303 PNKLP 307
           P   P
Sbjct: 444 PQYQP 448

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 144/352 (40%), Gaps = 91/352 (25%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALRE-------IKLLKELKSPH 72
           +GEGT+  VY          +A  ++++G +++     AL+        I++  EL+   
Sbjct: 29  IGEGTFSSVY----------LATAQLQVGPEEK----IALKHLIPTSHPIRIAAELQCLT 74
Query: 73  IIELID-----AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +    D      +  + N H+V      + E+ +   N  LS  +++ YM    K L   
Sbjct: 75  VAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN-SLSFQEVREYMLNLFKALKRI 133
Query: 128 HKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFT----------------- 169
           H+  ++HRD+KP+N L      +  L DFGLA+  G+ D +                   
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ--GTHDTKIELLKFVQSEAQQERCSQN 191
Query: 170 ---------HQVFAR----WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGS 215
                     QV  R     +RAPE+L         +D+W+AG IF  LL+ R PF + S
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 216 SDIDQLGKIFAAFGT------------------ATPSQWPDLAYLPDYVEYQYVAAPPLR 257
            D+  L +I    G+                    P+Q  DL  L + +     + P L 
Sbjct: 252 DDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQ--DLRKLCERLRGMDSSTPKLT 309
Query: 258 SLFPSAS----------DDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
           S     +          D+A DLL K+   +P +RITA++AL H +F    L
Sbjct: 310 SDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMSL 361

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 15  LKR-EVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG--VNFTALREIKLLKELKS 70
           LKR +VLG G +G VYK I    G+TV I   I++  +  G   N   + E  ++  +  
Sbjct: 40  LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 71  PHIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           PH++ L+        + LV + M     LE V  + +   S   +   +Q+  KG+ +  
Sbjct: 100 PHLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA-KGMMYLE 157
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFG 185
           ++ ++HRD+   N+L+ S   +K+ DFGLAR+    ++ +     ++  +W     + + 
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY- 216
Query: 186 AKQYGAGVDVWAAGCIFAELLN 207
            +++    DVW+ G    EL+ 
Sbjct: 217 -RKFTHQSDVWSYGVTIWELMT 237

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 15  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 67
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 68  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 186
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 187 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 216

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 14  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 66
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 67  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 185
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 186 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 215

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 16  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 68
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 69  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 187
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 188 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 217

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 66  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 118
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 119 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 237
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 238 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 267

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 16  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRAS 68
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +    M+   +
Sbjct: 69  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 187
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D+W+ G I   LL   P
Sbjct: 188 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYP 217

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 187 LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEK 241
Query: 73  IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +++L           +  +  KG+L    +F++ ++   +R   +    A I S      
Sbjct: 242 LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 292
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
            G+A+  +   +HRD++  N+L+G +   K+ADFGL R+    D  +T +  A++   + 
Sbjct: 293 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWT 349
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE  L+G  ++    DVW+ G +  EL  +             G++           +P
Sbjct: 350 APEAALYG--RFTIKSDVWSFGILLTELTTK-------------GRV----------PYP 384
Query: 238 DLAY--LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
            +    + D VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    Y
Sbjct: 385 GMVNREVLDQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 439
Query: 294 FSSAPLPTEPNKLP 307
           F+S    TEP   P
Sbjct: 440 FTS----TEPQXQP 449

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 20  LGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           LG G +G V + +    K    VAIK ++ G +K       +RE +++ +L +P+I+ LI
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLI 76
Query: 78  DAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                +  L LV E      L   +      +  +++   +     G+ +  +K  +HRD
Sbjct: 77  GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGV 193
           +   N+L+ +    K++DFGL++  G+ D  +T +   +W   + APE +   +++ +  
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRS 194
Query: 194 DVWAAGCIFAELLN--RRPF 211
           DVW+ G    E L+  ++P+
Sbjct: 195 DVWSYGVTMWEALSYGQKPY 214

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK I    G+ V    AIK +R     +  N   L E  ++  + SP
Sbjct: 21  KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA-NKEILDEAYVMAGVGSP 79
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           ++  L+        + LV + M    L   +R     L   D+ ++     KG+++    
Sbjct: 80  YVSRLL-GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---THQVFARWYRAPELLFGAK 187
            ++HRD+   N+L+ S   +K+ DFGLAR+    +  +     +V  +W     +L   +
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL--RR 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
           ++    DVW+ G    EL+ 
Sbjct: 197 RFTHQSDVWSYGVTVWELMT 216

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 78  HVCRLL-GICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 72/314 (22%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+++   
Sbjct: 20  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKIRHEK 74
Query: 73  IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +++L           +  +  KG+L    +F++ ++   +R   +    A I S      
Sbjct: 75  LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 125
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
            G+A+  +   +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + 
Sbjct: 126 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 182
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           APE  L+G  ++    DVW+ G +  EL    R P+  G  + + L              
Sbjct: 183 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 225
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
                   D VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    Y
Sbjct: 226 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 294 FSSAPLPTEPNKLP 307
           F+S    TEP   P
Sbjct: 273 FTS----TEPQYQP 282

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 113/234 (48%), Gaps = 16/234 (6%)
Query: 19  VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHII 74
           V+G G +G V      +  K    VAIK +++G  +K+  +F  L E  ++ +   P+II
Sbjct: 29  VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNII 86
Query: 75  ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L         + +V E+ME   L+T ++  +   +   +   ++    G+ +      +
Sbjct: 87  HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQY 189
           HRD+   N+LI S+   K++DFGL+R+    P+  +T    ++  RW  APE +   +++
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TAPEAI-AFRKF 204
Query: 190 GAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
            +  DVW+ G +  E+++   RP+ + ++  D +  +   +   +P   P   Y
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYWEMTNQ-DVIKAVEEGYRLPSPMDCPAALY 257

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 72/314 (22%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 20  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73  IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +++L           +  +  KG L    +F++ ++   +R   +    A I S      
Sbjct: 75  LVQLYAVVSEEPIYIVTEYMSKGCL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 125
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
            G+A+  +   +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + 
Sbjct: 126 -GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 182
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           APE  L+G  ++    DVW+ G +  EL    R P+  G  + + L              
Sbjct: 183 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 225
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
                   D VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    Y
Sbjct: 226 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 294 FSSAPLPTEPNKLP 307
           F+S    TEP   P
Sbjct: 273 FTS----TEPQYQP 282

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 17  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 71
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M   + L+ +   T  +L    +         G+A+  + 
Sbjct: 72  LVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D  +T +  A++   + APE  L+G 
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYG- 187
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 188 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 223
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  +P+ R T +  QA    YF+S    TE
Sbjct: 224 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 274
Query: 303 PNKLP 307
           P   P
Sbjct: 275 PQYQP 279

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTVAIK-KIRLGKQKEG-VNFTALREIKL-LKELKSPH 72
           K +VLG G +G V+K +    G+++ I   I++ + K G  +F A+ +  L +  L   H
Sbjct: 17  KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I+ L+   P   +L LV +++    L   +R     L P  + ++     KG+ +  +  
Sbjct: 77  IVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           ++HR++   N+L+ S  Q+++ADFG+A +    D++  +   +   +W     + FG  +
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG--K 193
Query: 189 YGAGVDVWAAGCIFAELLN 207
           Y    DVW+ G    EL+ 
Sbjct: 194 YTHQSDVWSYGVTVWELMT 212

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 48/294 (16%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K  K  +   K+ V  T L E ++L+  + P
Sbjct: 14  YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 70
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
            +  L  +F     L  V E+    +L   +    +F S    + Y    +  L + H +
Sbjct: 71  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 129
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--YRAPELLFGAK 187
           K V++RD+K  NL++   G +K+ DFGL +  G  D   T + F     Y APE+L    
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGA-TMKXFCGTPEYLAPEVL-EDN 186
Query: 188 QYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            YG  VD W  G +  E++  R PF   + D ++L ++        P             
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP------------- 231
Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFS 295
                     R+L P A      LLS +   DPK R+      A++ ++HR+F+
Sbjct: 232 ----------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 271

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 20  LGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           LG G +G V + +    K    VAIK ++ G +K       +RE +++ +L +P+I+ LI
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLI 402
Query: 78  DAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                +  L LV E      L   +      +  +++   +     G+ +  +K  +HR+
Sbjct: 403 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGV 193
           +   N+L+ +    K++DFGL++  G+ D  +T +   +W   + APE +   +++ +  
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRS 520
Query: 194 DVWAAGCIFAELLN 207
           DVW+ G    E L+
Sbjct: 521 DVWSYGVTMWEALS 534

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 44  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 102
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 103 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 161
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 219
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 220 IYTHQSDVWSYGVTVWELMT 239

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 72/314 (22%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 20  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73  IIEL-----------IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
           +++L           +  +  KG+L    +F++ ++   +R   +    A I S      
Sbjct: 75  LVQLYAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS------ 125
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YR 178
            G+A+  +   +HRD+   N+L+G +   K+ADFGLAR+    D  +T +  A++   + 
Sbjct: 126 -GMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT 182
Query: 179 APE-LLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           APE  L+G  ++    DVW+ G +  EL    R P+  G  + + L              
Sbjct: 183 APEAALYG--RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL-------------- 225
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRY 293
                   D VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    Y
Sbjct: 226 --------DQVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 294 FSSAPLPTEPNKLP 307
           F+S    TEP   P
Sbjct: 273 FTS----TEPQYQP 282

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 66/303 (21%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K ++  +   K+ V  T L E ++L+  + P
Sbjct: 13  YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 69
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
            +  L  +F     L  V E+    +L   +    +F S    + Y    +  L + H +
Sbjct: 70  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 128
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYR 178
           K V++RD+K  NL++   G +K+ DFGL +             G+P+           Y 
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE-----------YL 177
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE+L     YG  VD W  G +  E++  R PF   + D ++L ++        P    
Sbjct: 178 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP---- 230
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHR 292
                              R+L P A      LLS +   DPK R+      A++ ++HR
Sbjct: 231 -------------------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHR 267
Query: 293 YFS 295
           +F+
Sbjct: 268 FFA 270

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 78  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E +G G +G V+          VA+K  R     + +    L+E ++LK+   P+I+ LI
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIVRLI 178
Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT---LKGLAFCHKKWVL 133
                K  +++V E ++  D  T +R     L    +K+ +QM      G+ +   K  +
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLR---VKTLLQMVGDAAAGMEYLESKCCI 235
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR-----IFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
           HRD+   N L+     LK++DFG++R     ++ +       QV  +W  APE L    +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG--LRQVPVKW-TAPEAL-NYGR 291
Query: 189 YGAGVDVWAAGCIFAE 204
           Y +  DVW+ G +  E
Sbjct: 292 YSSESDVWSFGILLWE 307

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 22  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 80
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 81  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 197
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 198 IYTHQSDVWSYGVTVWELMT 217

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 21  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 80  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 29  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 87
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 88  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 204
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 205 IYTHQSDVWSYGVTVWELMT 224

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 25  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 83
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 84  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 142
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 200
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 201 IYTHQSDVWSYGVTVWELMT 220

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-- 74
           +E LG G +G V + I   TG+ VAIK+ R     +      L EI+++K+L  P+++  
Sbjct: 19  KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNVVSA 77
Query: 75  -ELIDAF----PHKGNLHLVFEFMET-DLETVIRN--TNIFLSPADIKSYMQMTLKGLAF 126
            E+ D      P+   L L  E+ E  DL   +        L    I++ +      L +
Sbjct: 78  REVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQL---KLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
            H+  ++HRD+KP N+++    Q    K+ D G A+     +   T  V    Y APELL
Sbjct: 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELL 195
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKI 224
              K+Y   VD W+ G + F  +   RPFL     +   GK+
Sbjct: 196 -EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 22  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 80
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 81  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 197
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 198 IYTHQSDVWSYGVTVWELMT 217

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 22  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 80
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 81  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 197
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 198 IYTHQSDVWSYGVTVWELMT 217

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 26  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 84
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 85  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 201
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 202 IYTHQSDVWSYGVTVWELMT 221

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 66/303 (21%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSP 71
           YLK  +LG+GT+G V    +  TG+  A+K ++  +   K+ V  T L E ++L+  + P
Sbjct: 12  YLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHP 68
Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-K 129
            +  L  +F     L  V E+    +L   +    +F S    + Y    +  L + H +
Sbjct: 69  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF-SEDRARFYGAEIVSALDYLHSE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR-----------IFGSPDRRFTHQVFARWYR 178
           K V++RD+K  NL++   G +K+ DFGL +             G+P+           Y 
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE-----------YL 176
Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE+L     YG  VD W  G +  E++  R PF   + D ++L ++        P    
Sbjct: 177 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFELILMEEIRFP---- 229
Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHR 292
                              R+L P A      LLS +   DPK R+      A++ ++HR
Sbjct: 230 -------------------RTLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHR 266
Query: 293 YFS 295
           +F+
Sbjct: 267 FFA 269

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-- 74
           +E LG G +G V + I   TG+ VAIK+ R     +      L EI+++K+L  P+++  
Sbjct: 20  KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNVVSA 78
Query: 75  -ELIDAF----PHKGNLHLVFEFMET-DLETVIRN--TNIFLSPADIKSYMQMTLKGLAF 126
            E+ D      P+   L L  E+ E  DL   +        L    I++ +      L +
Sbjct: 79  REVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 127 CHKKWVLHRDMKPNNLLIGSHGQL---KLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
            H+  ++HRD+KP N+++    Q    K+ D G A+     +   T  V    Y APELL
Sbjct: 138 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELL 196
Query: 184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKI 224
              K+Y   VD W+ G + F  +   RPFL     +   GK+
Sbjct: 197 -EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 17  CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 76  LIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAPELLFGAKQYGAG 192
           RD+   N+L+ S+  +KL DFGL+R     +  +    ++  +W  APE +   +++ + 
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM-APESI-NFRRFTSA 192
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
            DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 193 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 225

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 13/219 (5%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT------ALREIKL 64
           + +Y     LG G +G V+ A+D +  + V +K I+  K  E              EI +
Sbjct: 23  SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFMET--DLETVIRNTNIFLSPADIKSYM-QMTL 121
           L  ++  +II+++D F ++G   LV E   +  DL   I        P  + SY+ +  +
Sbjct: 83  LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP--LASYIFRQLV 140
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
             + +   K ++HRD+K  N++I     +KL DFG A  +    + F        Y APE
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA-YLERGKLFYTFCGTIEYCAPE 199
Query: 182 LLFGAKQYGAGVDVWAAGC-IFAELLNRRPFLQGSSDID 219
           +L G    G  +++W+ G  ++  +    PF +    ++
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE 238

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 20  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  +++V E+M   + L+ +      +L    +         G+A+  + 
Sbjct: 75  LVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D   T +  A++   + APE  L+G 
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYG- 190
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 191 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 226
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  DP+ R T +  QA    YF+S    TE
Sbjct: 227 QVERGYRMPCP-----PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS----TE 277
Query: 303 PNKLP 307
           P   P
Sbjct: 278 PQYQP 282

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 6   LSKKVADRYLKRE------VLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNF 56
            + KV    L RE      V+G G +G V         +  A+K   K  + K+ E   F
Sbjct: 62  FTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACF 121
Query: 57  TALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKS 115
              R++  L    S  I  L  AF    NL+LV ++ +  DL T++      L     + 
Sbjct: 122 REERDV--LVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF 179
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG-LARIFGSPDRRFTHQVFA 174
           Y+   +  +   H+   +HRD+KP+N+L+  +G ++LADFG   ++      + +  V  
Sbjct: 180 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
Query: 175 RWYRAPELL----FGAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIF 225
             Y +PE+L     G  +YG   D W+ G C++  L    PF    S ++  GKI 
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIM 294

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 13  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 71
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 72  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 188
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 189 IYTHQSDVWSYGVTVWELMT 208

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 78  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E +G G +G V+          VA+K  R     + +    L+E ++LK+   P+I+ LI
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIVRLI 178
Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT---LKGLAFCHKKWVL 133
                K  +++V E ++  D  T +R     L    +K+ +QM      G+ +   K  +
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLR---VKTLLQMVGDAAAGMEYLESKCCI 235
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPELLFGAKQYG 190
           HRD+   N L+     LK++DFG++R         +    QV  +W  APE L    +Y 
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPEAL-NYGRYS 293
Query: 191 AGVDVWAAGCIFAE 204
           +  DVW+ G +  E
Sbjct: 294 SESDVWSFGILLWE 307

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 456 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAG 192
           RD+   N+L+ S+  +KL DFGL+R        +    ++  +W  APE +   +++ + 
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI-NFRRFTSA 572
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
            DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 573 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 605

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 20  LGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKELKSPH 72
           +GEG +G V++A     +  +    VA+K +   K++   +  A   RE  L+ E  +P+
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKML---KEEASADMQADFQREAALMAEFDNPN 111
Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIR----NTNIFLSPADIKSYMQMT------- 120
           I++L+        + L+FE+M   DL   +R    +T   LS +D+ +  +++       
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 121 ------------LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167
                         G+A+  ++  +HRD+   N L+G +  +K+ADFGL+R   S D   
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 168 --FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
                 +  RW   PE +F   +Y    DVWA G +  E+ +
Sbjct: 232 ADGNDAIPIRW-MPPESIF-YNRYTTESDVWAYGVVLWEIFS 271

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT-----------NIFLSPADIKSY 116
             +++ L+ A    G  L ++ EF +  +L T +R+              FL+   +  Y
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFTHQVF 173
                KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I+  PD  R+   ++ 
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 210 LKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 241

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 21  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 80  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFG A++ G+ ++ +  +   V  +W     +L   +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I+  PD  R+  
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 210 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 15  LKREVLGEGTYGVV-----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           LKRE LGEG +G V     Y     +    VA+K ++        +F   RE +LL  L+
Sbjct: 17  LKRE-LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH--REAELLTNLQ 73
Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIR------------NTNIFLSPADIKSY 116
             HI++          L +VFE+M+  DL   +R            N    L+ + +   
Sbjct: 74  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF- 173
            Q    G+ +   +  +HRD+   N L+G +  +K+ DFG++R   S D  R   H +  
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSD 217
            RW     +++  +++    DVW+ G +  E+    ++P+ Q S++
Sbjct: 194 IRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 237

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VL  G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 26  KIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 84
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 85  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 201
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 202 IYTHQSDVWSYGVTVWELMT 221

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKI-RLGKQKEGVNFTALREIKLLKEL 68
           + RE LG+G++G+VY+ +     +      VAIK +      +E + F  L E  ++KE 
Sbjct: 16  MSRE-LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEF 72
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMT- 120
              H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM  
Sbjct: 73  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 121 --LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-AR 175
               G+A+ +    +HRD+   N  +     +K+ DFG+ R     D  R+    +   R
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W     L  G   +    DVW+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 193 WMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGGLLDKP 249
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              PD+      + +QY   P +R  F
Sbjct: 250 DNCPDMLLELMRMCWQY--NPKMRPSF 274

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 15/209 (7%)
Query: 19  VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHII 74
           V+G G +G V      +  K    VAIK +++G  +K+  +F  L E  ++ +   P+++
Sbjct: 50  VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDF--LCEASIMGQFDHPNVV 107
Query: 75  ELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L         + +V EFME   L+  +R  +   +   +   ++    G+ +      +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQY 189
           HRD+   N+L+ S+   K++DFGL+R+    P+  +T    ++  RW  APE +   +++
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TAPEAI-QYRKF 225
Query: 190 GAGVDVWAAGCIFAELLN--RRPFLQGSS 216
            +  DVW+ G +  E+++   RP+   S+
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDMSN 254

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 91
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 92  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I+  PD  R+  
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 212 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 247

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I+  PD  R+  
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 210 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 23  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 81
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 82  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFG A++ G+ ++ +  +   V  +W     +L   +
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 198
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 199 IYTHQSDVWSYGVTVWELMT 218

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 21  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 80  HVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFG A++ G+ ++ +  +   V  +W     +L   +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 16  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 74
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     +G+ +   +
Sbjct: 75  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR 133
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 191
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 192 IYTHQSDVWSYGVTVWELMT 211

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 72  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 126
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I+  PD  R+  
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 247 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 282

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 17  CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 76  LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           RD+   N+L+ S+  +KL DFGL+R    S   + +       + APE +   +++ +  
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 193
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
           DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 194 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 225

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 54/305 (17%)
Query: 15  LKREV-LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ EV LG+G +G V+  + T  G T VAIK ++ G          L+E +++K+L+   
Sbjct: 10  LRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 64
Query: 73  IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +++L  A   +  + +V E+M   + L+ +   T  +L    +         G+A+  + 
Sbjct: 65  LVQLY-AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGA 186
             +HRD++  N+L+G +   K+ADFGLAR+    D   T +  A++   + APE  L+G 
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYG- 180
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            ++    DVW+ G +  EL    R P+  G  + + L                      D
Sbjct: 181 -RFTIKSDVWSFGILLTELTTKGRVPY-PGMVNREVL----------------------D 216
Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ--QALEHRYFSSAPLPTE 302
            VE  Y    P     P   +   DL+ + +  +P+ R T +  QA    YF+S    TE
Sbjct: 217 QVERGYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS----TE 267
Query: 303 PNKLP 307
           P   P
Sbjct: 268 PQYQP 272

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT-----------NIFLSPADIKSY 116
             +++ L+ A    G  L ++ EF +  +L T +R+              FL+   +  Y
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFTHQVF 173
                KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I+  PD  R+   ++ 
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 210 LKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 241

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AI ++R     +  N   L E  ++  + +P
Sbjct: 53  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKA-NKEILDEAYVMASVDNP 111
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 112 HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 170
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 228
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 229 IYTHQSDVWSYGVTVWELMT 248

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VL  G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 19  KIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 78  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 19  VLGEGTYGVVYKA--IDTKTGQT-VAIKKI-RLGKQKEGVNFTALREIKLLKELKSPHII 74
           V+G+G +GVVY    ID    +   AIK + R+ + ++   F  LRE  L++ L  P+++
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF--LREGLLMRGLNHPNVL 85
Query: 75  ELID-AFPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
            LI    P +G  H++  +M   DL   IR+     +  D+ S+     +G+ +  ++  
Sbjct: 86  ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK----- 187
           +HRD+   N ++     +K+ADFGLAR     DR +      R  R P      +     
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 188 QYGAGVDVWAAGCIFAELLNR 208
           ++    DVW+ G +  ELL R
Sbjct: 204 RFTTKSDVWSFGVLLWELLTR 224

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF-----TALREIKLLKEL 68
           +L  ++LG+G    V++    KTG   AIK          ++F       +RE ++LK+L
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFN------NISFLRPVDVQMREFEVLKKL 64
Query: 69  KSPHIIELIDAFPHKGNLH--LVFEFMET-DLETVIRN-TNIF-LSPADIKSYMQMTLKG 123
              +I++L          H  L+ EF     L TV+   +N + L  ++    ++  + G
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 124 LAFCHKKWVLHRDMKPNNLL--IGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRA 179
           +    +  ++HR++KP N++  IG  GQ   KL DFG AR     D +F        Y  
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVXLYGTEEYLH 183
Query: 180 PELLFGA-------KQYGAGVDVWAAGCIF 202
           P++   A       K+YGA VD+W+ G  F
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTF 213

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 5   DLSKKVADRYLKRE-VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTAL 59
           + +K++    +K E V+G G +G V      +  K    VAIK ++ G   K+  +F  L
Sbjct: 21  EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF--L 78
Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQ 118
            E  ++ +   P+II L         + ++ E+ME   L+  +R  +   +   +   ++
Sbjct: 79  SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 138
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFA 174
               G+ +      +HRD+   N+L+ S+   K++DFG++R+    P+  +T    ++  
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           RW  APE +   +++ +  DVW+ G +  E+++   RP+   S+
Sbjct: 199 RW-TAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 19  CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 78  LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 136
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAG 192
           RD+   N+L+ S+  +KL DFGL+R        +    ++  +W  APE +   +++ + 
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI-NFRRFTSA 194
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
            DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 195 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 227

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 45  CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 104 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 162
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           RD+   N+L+ S+  +KL DFGL+R    S   + +       + APE +   +++ +  
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 221
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
           DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 222 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 253

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 5   DLSKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALR 60
           + +K++   Y+K  EV+G G +G V +      G+    VAIK ++ G   E      L 
Sbjct: 8   EFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-GGYTERQRREFLS 66
Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQM 119
           E  ++ + + P+II L     +   + ++ EFME   L++ +R  +   +   +   ++ 
Sbjct: 67  EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH----QVF 173
              G+ +  +   +HRD+   N+L+ S+   K++DFGL+R     S D   T     ++ 
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
            RW  APE +   +++ +  D W+ G +  E+++   RP+   S+
Sbjct: 187 IRW-TAPEAI-AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 20  CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 79  LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 137
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAG 192
           RD+   N+L+ S+  +KL DFGL+R        +    ++  +W  APE +   +++ + 
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI-NFRRFTSA 195
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
            DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 196 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 228

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 80
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I+  PD  R+  
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 201 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    +E ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 21  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 79
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 80  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFG A++ G+ ++ +  +   V  +W     +L   +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 196
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQT---VAIKKIRLG-KQKEGVNFTALREIKLLK 66
           A R    +++G G  G V        GQ    VAIK ++ G  +++  +F  L E  ++ 
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF--LSEASIMG 105
Query: 67  ELKSPHIIELIDAFPHKGNLHLVF-EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           +   P+II L +    +G L ++  E+ME   L+T +R  +   +   +   ++    G+
Sbjct: 106 QFDHPNIIRL-EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAP 180
            +      +HRD+   N+L+ S+   K++DFGL+R+    PD  +T    ++  RW  AP
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW-TAP 223
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELL--NRRPF 211
           E +   + + +  DVW+ G +  E+L    RP+
Sbjct: 224 EAI-AFRTFSSASDVWSFGVVMWEVLAYGERPY 255

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 14  CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 73  LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 131
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           RD+   N+L+ S+  +KL DFGL+R    S   + +       + APE +   +++ +  
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 190
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
           DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 191 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 222

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 80
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I+  PD  R+  
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 201 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 17  CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 76  LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           RD+   N+L+ S+  +KL DFGL+R    S   + +       + APE +   +++ +  
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 193
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
           DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 194 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 225

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 14  YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF-----TALREIKLLKEL 68
           +L  ++LG+G    V++    KTG   AIK          ++F       +RE ++LK+L
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFN------NISFLRPVDVQMREFEVLKKL 64
Query: 69  KSPHIIELIDAFPHKGNLH--LVFEFMET-DLETVIRN-TNIF-LSPADIKSYMQMTLKG 123
              +I++L          H  L+ EF     L TV+   +N + L  ++    ++  + G
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 124 LAFCHKKWVLHRDMKPNNLL--IGSHGQ--LKLADFGLARIFGSPDRRFTHQVFARWYRA 179
           +    +  ++HR++KP N++  IG  GQ   KL DFG AR     D +F        Y  
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVSLYGTEEYLH 183
Query: 180 PELLFGA-------KQYGAGVDVWAAGCIF 202
           P++   A       K+YGA VD+W+ G  F
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTF 213

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 22  CIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 81  LIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 139
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAG 192
           RD+   N+L+ S+  +KL DFGL+R        +    ++  +W  APE +   +++ + 
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI-NFRRFTSA 197
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
            DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 198 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 230

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VL  G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 26  KIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 84
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 85  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W     +L   +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 201
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 202 IYTHQSDVWSYGVTVWELMT 221

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 26  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 84
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 85  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFG A++ G+ ++ +  +   V  +W     +L   +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 201
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 202 IYTHQSDVWSYGVTVWELMT 221

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 16  KREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           K +VLG G +G VYK +    G+ V    AIK++R     +  N   L E  ++  + +P
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNP 77
Query: 72  HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           H+  L+        + L+ + M    L   +R     +    + ++     KG+ +   +
Sbjct: 78  HVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPELLFGAK 187
            ++HRD+   N+L+ +   +K+ DFG A++ G+ ++ +  +   V  +W     +L   +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH--R 194
Query: 188 QYGAGVDVWAAGCIFAELLN 207
            Y    DVW+ G    EL+ 
Sbjct: 195 IYTHQSDVWSYGVTVWELMT 214

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 43/226 (19%)
Query: 18  EVLGEGTYGVVYKA----IDTKTG-QTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL 68
           + LGEG +G V KA    +  + G  TVA+K +     KE  + + LR    E  +LK++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-----KENASPSELRDLLSEFNVLKQV 83
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF-------------------- 107
             PH+I+L  A    G L L+ E+ +   L   +R +                       
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 108 ---LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164
              L+  D+ S+     +G+ +  +  ++HRD+   N+L+    ++K++DFGL+R     
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 165 D---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           D   +R   ++  +W  A E LF    Y    DVW+ G +  E++ 
Sbjct: 204 DSXVKRSQGRIPVKWM-AIESLFD-HIYTTQSDVWSFGVLLWEIVT 247

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 36  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 90
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT--------------NIFLSPADI 113
             +++ L+ A    G  L ++ EF +  +L T +R+                 FL+   +
Sbjct: 91  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFTH 170
             Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I   PD  R+   
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 211 RLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 43/226 (19%)
Query: 18  EVLGEGTYGVVYKA----IDTKTG-QTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL 68
           + LGEG +G V KA    +  + G  TVA+K +     KE  + + LR    E  +LK++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-----KENASPSELRDLLSEFNVLKQV 83
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF-------------------- 107
             PH+I+L  A    G L L+ E+ +   L   +R +                       
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 108 ---LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164
              L+  D+ S+     +G+ +  +  ++HRD+   N+L+    ++K++DFGL+R     
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 165 D---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           D   +R   ++  +W  A E LF    Y    DVW+ G +  E++ 
Sbjct: 204 DSXVKRSQGRIPVKWM-AIESLFD-HIYTTQSDVWSFGVLLWEIVT 247

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 37/223 (16%)
Query: 18  EVLGEGTYGVVYKAID---TKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKELKS-PH 72
           +VLG G +G V  A     +KTG ++ +    L ++ +     AL  E+K++ +L S  +
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 73  IIELIDAFPHKGNLHLVFEFM-ETDLETVIR-----------------------NTNIFL 108
           I+ L+ A    G ++L+FE+    DL   +R                       + N+ L
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV-L 169
Query: 109 SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL-KLADFGLARIFGSPDRR 167
           +  D+  +     KG+ F   K  +HRD+   N+L+ +HG++ K+ DFGLAR   S D  
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-THGKVVKICDFGLARDIMS-DSN 227
Query: 168 FTHQVFARW---YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           +  +  AR    + APE LF    Y    DVW+ G +  E+ +
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFS 269

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKEL 68
           + D  +  +VLG G  G V +  + +T +  A+K ++   +       A RE++L  +  
Sbjct: 60  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPK-------ARREVELHWRAS 112
Query: 69  KSPHIIELIDAFPH----KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLK 122
           + PHI+ ++D + +    +  L +V E ++  +L + I++  +   +  +     +   +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGE 172
Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            + + H   + HRD+KP NLL  S   +  LKL DFG A+   S +   T   +  +Y A
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVA 231
Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           PE+L G ++Y    D W+ G I   LL   P
Sbjct: 232 PEVL-GPEKYDKSCDXWSLGVIXYILLCGYP 261

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 43/226 (19%)
Query: 18  EVLGEGTYGVVYKA----IDTKTG-QTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL 68
           + LGEG +G V KA    +  + G  TVA+K +     KE  + + LR    E  +LK++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-----KENASPSELRDLLSEFNVLKQV 83
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF-------------------- 107
             PH+I+L  A    G L L+ E+ +   L   +R +                       
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 108 ---LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164
              L+  D+ S+     +G+ +  +  ++HRD+   N+L+    ++K++DFGL+R     
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 165 D---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           D   +R   ++  +W  A E LF    Y    DVW+ G +  E++ 
Sbjct: 204 DSYVKRSQGRIPVKWM-AIESLFD-HIYTTQSDVWSFGVLLWEIVT 247

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 89  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 147
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
              + APE LF  + Y    DVW+ G +  E+  
Sbjct: 268 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 300

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 89
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I   PD  R+  
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 210 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 5   DLSKKVADRYLKRE-VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTAL 59
           + +K++    +K E V+G G +G V      +  K    VAIK ++ G   K+  +F  L
Sbjct: 6   EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF--L 63
Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQ 118
            E  ++ +   P+II L         + ++ E+ME   L+  +R  +   +   +   ++
Sbjct: 64  SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 123
Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFA 174
               G+ +      +HRD+   N+L+ S+   K++DFG++R+    P+  +T    ++  
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           RW  APE +   +++ +  DVW+ G +  E+++   RP+   S+
Sbjct: 184 RW-TAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 17  CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 76  LIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQYGAGV 193
           RD+   N+L+ +   +KL DFGL+R    S   + +       + APE +   +++ +  
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSAS 193
Query: 194 DVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
           DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 194 DVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 225

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 19  VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            +GEG +G V++ I          VAIK  +     + V    L+E   +++   PHI++
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  +H
Sbjct: 456 LIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAG 192
           RD+   N+L+ +   +KL DFGL+R        +    ++  +W  APE +   +++ + 
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI-NFRRFTSA 572
Query: 193 VDVWAAGCIFAELLNR--RPFLQGSSDIDQLGKI 224
            DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 573 SDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 605

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 70/256 (27%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           RY     LG G +  V+ + D +  + VA+K +   K  E    TAL EI+LLK +++  
Sbjct: 38  RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV---KSAEHYTETALDEIRLLKSVRNSD 94
Query: 73  --------IIELIDAFPHKG----NLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQM 119
                   +++L+D F   G    ++ +VFE +   L + +I++    L    +K  +Q 
Sbjct: 95  PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 154
Query: 120 TLKGLAFCHKKW-VLHRDMKPNNLLIGSHGQ----------------------------- 149
            L+GL + H K  ++H D+KP N+L+  + Q                             
Sbjct: 155 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 214
Query: 150 --------------------LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
                               +K+AD G A       + FT  +  R YR+ E+L G+  Y
Sbjct: 215 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWV---HKHFTEDIQTRQYRSLEVLIGSG-Y 270
Query: 190 GAGVDVWAAGCIFAEL 205
               D+W+  C+  EL
Sbjct: 271 NTPADIWSTACMAFEL 286

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 34/216 (15%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEF-----------------MET--DLETVIRNTNIFLSPAD 112
           +II L+ A    G L+++ E+                 ME   D+  V      F    D
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF---KD 158
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTH 170
           + S      +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
                 + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 219 GRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 80
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 81  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I   PD  R+  
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 201 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
           + LG G +G V +A     G+  A+ K+ +   K   +       + E+K++  L +  +
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73  IIELIDAFPHKGNLHLVFEF----------------METDLETVIRNTNIFLSPADIKSY 116
           I+ L+ A  H G + ++ E+                +ETD    I N+   LS  D+  +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST--LSTRDLLHF 169
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
                +G+AF   K  +HRD+   N+L+ +    K+ DFGLAR   + D  +  +  AR 
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARL 228
Query: 177 ---YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
              + APE +F    Y    DVW+ G +  E+ +
Sbjct: 229 PVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFS 261

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           +GEG +GVVYK     T  TVA+KK+   +    E +     +EIK++ + +  +++EL+
Sbjct: 39  MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-----KGLAFCHKKWV 132
                  +L LV+ +M     +++   +       +  +M+  +      G+ F H+   
Sbjct: 97  GFSSDGDDLCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYRAPELLFGA 186
           +HRD+K  N+L+      K++DFGLAR       +F   V          Y APE L G 
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLAR----ASEKFAQTVMXSRIVGTTAYMAPEALRG- 209
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
            +     D+++ G +  E++   P
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLP 232

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 32  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 90
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 91  NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 151 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 210
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 211 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 242

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 35/216 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATXRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 91
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT-------------NIFLSPADIK 114
             +++ L+ A    G  L ++ EF +  +L T +R+                FL+   + 
Sbjct: 92  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFTHQ 171
            Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I   PD  R+   +
Sbjct: 152 XYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           +  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 212 LPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 35  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 93
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 94  NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 154 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 213
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 214 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 245

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 30  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 88
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 89  NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 149 CTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 208
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 209 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 240

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 74/285 (25%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           RY     LG G +  V+   D +  + VA+K +   K  +    TAL EIKLLK ++   
Sbjct: 32  RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVV---KSAQHYTETALDEIKLLKCVRESD 88
Query: 73  --------IIELIDAFPHKG----NLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQM 119
                   +++LID F   G    ++ +VFE +   L + +I++    L    +KS ++ 
Sbjct: 89  PSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQ 148
Query: 120 TLKGLAFCHKKW-VLHRDMKPNNLLI---------------------------------- 144
            L+GL + H K  ++H D+KP N+L+                                  
Sbjct: 149 VLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAP 208
Query: 145 -------------GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
                            ++K+AD G A       + FT  +  R YR+ E+L GA  Y  
Sbjct: 209 AADLLVNPLDPRNADKIRVKIADLGNACWV---HKHFTEDIQTRQYRSIEVLIGAG-YST 264
Query: 192 GVDVWAAGCIFAELLNRRPFLQGSS------DIDQLGKIFAAFGT 230
             D+W+  C+  EL       +  S      D D +  I    G+
Sbjct: 265 PADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      +  K    VAIK ++ G   K+  +F  L E  ++ +   P+I
Sbjct: 14  KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF--LSEASIMGQFDHPNI 71
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + ++ E+ME   L+  +R  +   +   +   ++    G+ +      
Sbjct: 72  IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAPELLFGAKQ 188
           +HRD+   N+L+ S+   K++DFG++R+    P+  +T    ++  RW  APE +   ++
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAI-AYRK 189
Query: 189 YGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           + +  DVW+ G +  E+++   RP+   S+
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSN 219

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           +GEG +GVVYK     T  TVA+KK+   +    E +     +EIK++ + +  +++EL+
Sbjct: 39  MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-----KGLAFCHKKWV 132
                  +L LV+ +M     +++   +       +  +M+  +      G+ F H+   
Sbjct: 97  GFSSDGDDLCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYRAPELLFGA 186
           +HRD+K  N+L+      K++DFGLAR       +F   V          Y APE L G 
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLAR----ASEKFAQTVMXXRIVGTTAYMAPEALRG- 209
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
            +     D+++ G +  E++   P
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLP 232

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           +GEG +GVVYK     T  TVA+KK+   +    E +     +EIK++ + +  +++EL+
Sbjct: 33  MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 78  DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-----KGLAFCHKKWV 132
                  +L LV+ +M     +++   +       +  +M+  +      G+ F H+   
Sbjct: 91  GFSSDGDDLCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYRAPELLFGA 186
           +HRD+K  N+L+      K++DFGLAR       +F   V          Y APE L G 
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLAR----ASEKFAQXVMXXRIVGTTAYMAPEALRG- 203
Query: 187 KQYGAGVDVWAAGCIFAELLNRRP 210
            +     D+++ G +  E++   P
Sbjct: 204 -EITPKSDIYSFGVVLLEIITGLP 226

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    K    VA+K I+ G   E   F   +E + + +L  P +++    
Sbjct: 16  LGSGQFGVV-KLGKWKGQYDVAVKMIKEGSMSEDEFF---QEAQTMMKLSHPKLVKFYGV 71
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  +++V E++    L   +R+    L P+ +        +G+AF      +HRD+ 
Sbjct: 72  CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLA 131
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+     +K++DFG+ R     D ++   V  ++   + APE +F   +Y +  DV
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYV--LDDQYVSSVGTKFPVKWSAPE-VFHYFKYSSKSDV 188
Query: 196 WAAGCIFAEL--LNRRPF 211
           WA G +  E+  L + P+
Sbjct: 189 WAFGILMWEVFSLGKMPY 206

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 70/256 (27%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           RY     LG G +  V+ + D +  + VA+K +   K  E    TAL EI+LLK +++  
Sbjct: 22  RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV---KSAEHYTETALDEIRLLKSVRNSD 78
Query: 73  --------IIELIDAFPHKG----NLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQM 119
                   +++L+D F   G    ++ +VFE +   L + +I++    L    +K  +Q 
Sbjct: 79  PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 138
Query: 120 TLKGLAFCHKKW-VLHRDMKPNNLLIGSHGQ----------------------------- 149
            L+GL + H K  ++H D+KP N+L+  + Q                             
Sbjct: 139 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 198
Query: 150 --------------------LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQY 189
                               +K+AD G A       + FT  +  R YR+ E+L G+  Y
Sbjct: 199 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWV---HKHFTEDIQTRQYRSLEVLIGSG-Y 254
Query: 190 GAGVDVWAAGCIFAEL 205
               D+W+  C+  EL
Sbjct: 255 NTPADIWSTACMAFEL 270

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 20  LGEGTYGVVYKA----ID-TKTGQTVAIKKIRLGKQKEGVNFTALR----EIKLLKEL-K 69
           LG G +G V +A    ID T T +TVA+K +     KEG   +  R    E+K+L  +  
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKML-----KEGATHSEHRALMSELKILIHIGH 80
Query: 70  SPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRNT---------------NIFLSPAD 112
             +++ L+ A    G  L ++ EF +  +L T +R+                  FL+   
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD--RRFT 169
           +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR I   PD  R+  
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            ++  +W  APE +F  + Y    DVW+ G +  E+ +
Sbjct: 201 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 12  DRYLKREVLGEGTYGVV-----YKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           D  LKRE LGEG +G V     Y    TK    VA+K ++        +F   RE +LL 
Sbjct: 16  DIVLKRE-LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ--REAELLT 72
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR----NTNIFL--SPADIKSYMQM 119
            L+  HI++          L +VFE+M+  DL   +R    +  I +   P   K  + +
Sbjct: 73  NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 120 T---------LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRF 168
           +           G+ +   +  +HRD+   N L+G++  +K+ DFG++R   S D  R  
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 192
Query: 169 THQVF-ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
            H +   RW     +++  +++    DVW+ G I  E+    ++P+ Q S+
Sbjct: 193 GHTMLPIRWMPPESIMY--RKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQT---VAIKKIRLG-KQKEGVNFTALREIKLLK 66
           A R    +++G G  G V        GQ    VAIK ++ G  +++  +F  L E  ++ 
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF--LSEASIMG 105
Query: 67  ELKSPHIIELIDAFPHKGNLHLVF-EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           +   P+II L +    +G L ++  E+ME   L+T +R  +   +   +   ++    G+
Sbjct: 106 QFDHPNIIRL-EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTH---QVFARWYRAP 180
            +      +HRD+   N+L+ S+   K++DFGL+R+    PD   T    ++  RW  AP
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW-TAP 223
Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELL--NRRPF 211
           E +   + + +  DVW+ G +  E+L    RP+
Sbjct: 224 EAI-AFRTFSSASDVWSFGVVMWEVLAYGERPY 255

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
              + APE LF  + Y    DVW+ G +  E+  
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIE 75
           +E +G G++G V++A     G  VA+K +       E VN   LRE+ ++K L+ P+I+ 
Sbjct: 42  KEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVL 98
Query: 76  LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKW- 131
            + A     NL +V E++       + + +      D +  + M     KG+ + H +  
Sbjct: 99  FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 132 -VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            ++HRD+K  NLL+     +K+ DFGL+R+  S             + APE+L       
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPS-N 217
Query: 191 AGVDVWAAGCIFAEL 205
              DV++ G I  EL
Sbjct: 218 EKSDVYSFGVILWEL 232

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 17  REVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPH 72
            EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P+
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPN 151
Query: 73  IIELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           ++ L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFG 185
             +HRD+   N ++     +K+ADFGLAR      F S   +   ++  +W     L   
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--Q 269
Query: 186 AKQYGAGVDVWAAGCIFAELLNR 208
            +++    DVW+ G +  EL+ R
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTR 292

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 18  EVLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V      +  K    VAIK ++ G  +K+  +F  L E  ++ +   P++
Sbjct: 39  QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDF--LSEASIMGQFDHPNV 96
Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + ++ EFME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 97  IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 156
Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH----QVFARWYRAPELLFGA 186
           +HRD+   N+L+ S+   K++DFGL+R     + D  +T     ++  RW  APE +   
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPEAI-QY 214
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPF 211
           +++ +  DVW+ G +  E+++   RP+
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERPY 241

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 14  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 68
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 69  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE    A
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 176
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 235

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 29  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL 83
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 84  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE    A
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 191
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 250

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 24  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 78
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 79  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE    A
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 186
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 245

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  +  T+   
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    +    VAIK I+ G   E      + E K++  L    +++L   
Sbjct: 32  LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 87
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + ++ E+M    L   +R          +    +   + + +   K  LHRD+ 
Sbjct: 88  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+   G +K++DFGL+R     D  +T  V +++   +  PE+L  +K + +  D+
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 204
Query: 196 WAAGCIFAEL--LNRRPF 211
           WA G +  E+  L + P+
Sbjct: 205 WAFGVLMWEIYSLGKMPY 222

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++ E+  + +L   +R         + +I   P       D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +++ADFGLAR   + D  ++ T+   
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 28/220 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 86
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 87  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL 205
           ++ T+      + APE LF  + Y    DVW+ G +  E+
Sbjct: 207 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 245

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 21  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 79
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 80  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 200 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 239

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 25  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 79
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 80  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE    A
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 187
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 246

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 19  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 73
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 74  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE    A
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 181
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 240

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 20  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 78
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 79  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 199 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 238

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 71
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 72  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 192 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 231

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 17  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 75
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 76  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 196 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 235

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 36  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 93
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K 
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR      F S   +   ++  +W     L    
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 211
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 86
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 87  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 207 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 246

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 86
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 87  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 207 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 246

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 36  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 93
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K 
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR      F S   +   ++  +W     L    
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 211
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 86
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 87  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 207 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 246

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    +    VAIK I+ G   E      + E K++  L    +++L   
Sbjct: 12  LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 67
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + ++ E+M    L   +R          +    +   + + +   K  LHRD+ 
Sbjct: 68  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 127
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+   G +K++DFGL+R     D  +T  V +++   +  PE+L  +K + +  D+
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 184
Query: 196 WAAGCIFAEL--LNRRPF 211
           WA G +  E+  L + P+
Sbjct: 185 WAFGVLMWEIYSLGKMPY 202

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 34  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 91
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K 
Sbjct: 92  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR      F S   +   ++  +W     L    
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 209
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTR 231

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    +    VAIK I+ G   E      + E K++  L    +++L   
Sbjct: 16  LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 71
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + ++ E+M    L   +R          +    +   + + +   K  LHRD+ 
Sbjct: 72  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 131
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+   G +K++DFGL+R     D  +T  V +++   +  PE+L  +K + +  D+
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 188
Query: 196 WAAGCIFAEL--LNRRPF 211
           WA G +  E+  L + P+
Sbjct: 189 WAFGVLMWEIYSLGKMPY 206

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 37  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 94
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K 
Sbjct: 95  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR      F S   +   ++  +W     L    
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 212
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTR 234

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 41  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 98
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K 
Sbjct: 99  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR      F S   +   ++  +W     L    
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL--QT 216
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTR 238

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 37  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 94
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K 
Sbjct: 95  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARI-----FGSPDRRFTHQVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR      F S   +   ++  +W     L    
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL--QT 212
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTR 234

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    +    VAIK I+ G   E      + E K++  L    +++L   
Sbjct: 23  LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 78
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + ++ E+M    L   +R          +    +   + + +   K  LHRD+ 
Sbjct: 79  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 138
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+   G +K++DFGL+R     D  +T  V +++   +  PE+L  +K + +  D+
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 195
Query: 196 WAAGCIFAEL--LNRRPF 211
           WA G +  E+  L + P+
Sbjct: 196 WAFGVLMWEIYSLGKMPY 213

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 12  DRYLKREVLGEGTYG--VVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G  V+ +AI     +      VA+K ++    ++ ++   + E+++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 127
Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+  + +L   ++               N    
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           ++ T+      + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 248 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 287

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 20  LGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           LG G +G V+  + T  G T VAIK ++ G        + L E +++K+LK   +++L  
Sbjct: 17  LGNGQFGEVW--MGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIMKKLKHDKLVQLY- 70
Query: 79  AFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
           A   +  +++V E+M     L+ +       L   ++         G+A+  +   +HRD
Sbjct: 71  AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 130
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPE-LLFGAKQYGAG 192
           ++  N+L+G+    K+ADFGLAR+    D   T +  A++   + APE  L+G  ++   
Sbjct: 131 LRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYG--RFTIK 186
Query: 193 VDVWAAGCIFAELLNR----RPFLQGSSDIDQ----------------LGKIFAAFGTAT 232
            DVW+ G +  EL+ +     P +     ++Q                L ++        
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKD 246
Query: 233 PSQWPDLAYLPDYVEYQYVAAPP 255
           P + P   YL  ++E  + A  P
Sbjct: 247 PEERPTFEYLQSFLEDYFTATEP 269

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
           + LG G +G V +A     G+  A+ K+ +   K   +       + E+K++  L +  +
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73  IIELIDAFPHKGNLHLVFEF----------------METDLETVIRNTNIFLSPADIKSY 116
           I+ L+ A  H G + ++ E+                +ETD    I N+    S  D+  +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA--STRDLLHF 169
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
                +G+AF   K  +HRD+   N+L+ +    K+ DFGLAR   + D  +  +  AR 
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARL 228
Query: 177 ---YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
              + APE +F    Y    DVW+ G +  E+ +
Sbjct: 229 PVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFS 261

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 17  REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIE 75
           +E +G G++G V++A     G  VA+K +       E VN   LRE+ ++K L+ P+I+ 
Sbjct: 42  KEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVL 98
Query: 76  LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKW- 131
            + A     NL +V E++       + + +      D +  + M     KG+ + H +  
Sbjct: 99  FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 132 -VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            ++HR++K  NLL+     +K+ DFGL+R+  S             + APE+L       
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPS-N 217
Query: 191 AGVDVWAAGCIFAEL 205
              DV++ G I  EL
Sbjct: 218 EKSDVYSFGVILWEL 232

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    +    VAIK I+ G   E      + E K++  L    +++L   
Sbjct: 17  LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 72
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + ++ E+M    L   +R          +    +   + + +   K  LHRD+ 
Sbjct: 73  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+   G +K++DFGL+R     D  +T  V +++   +  PE+L  +K + +  D+
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDI 189
Query: 196 WAAGCIFAEL--LNRRPF 211
           WA G +  E+  L + P+
Sbjct: 190 WAFGVLMWEIYSLGKMPY 207

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+G G +G V       T +  A+K   K  + K+ E   F   R++  L       I 
Sbjct: 80  KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV--LVNGDCQWIT 137
Query: 75  ELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L  AF  + +L+LV ++ +  DL T++      L     + Y+   +  +   H+   +
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 197
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR------------IFGSPDRRFTHQVFARWYRAPE 181
           HRD+KP+N+L+  +G ++LADFG                 G+PD           Y +PE
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD-----------YISPE 246
Query: 182 LLF----GAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIF 225
           +L     G  +YG   D W+ G C++  L    PF    S ++  GKI 
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIM 294

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G VYK    K    VA+K + +             E+ +L++ +  +I+ L   
Sbjct: 20  IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 75
Query: 80  FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           +  K  L +V ++ E + L   +  +        +    + T +G+ + H K ++HRD+K
Sbjct: 76  YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 135
Query: 139 PNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPEL--LFGAKQYGAGVD 194
            NN+ +     +K+ DFGLA +    S   +F     +  + APE+  +  +  Y    D
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 195 VWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           V+A G +  EL+  + P+    S+I+   +I    G  + S  PDL+
Sbjct: 196 VYAFGIVLYELMTGQLPY----SNINNRDQIIEMVGRGSLS--PDLS 236

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           +V+G G +G V       T +  A+K   K  + K+ E   F   R++  L       I 
Sbjct: 96  KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV--LVNGDCQWIT 153
Query: 75  ELIDAFPHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVL 133
            L  AF  + +L+LV ++ +  DL T++      L     + Y+   +  +   H+   +
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 213
Query: 134 HRDMKPNNLLIGSHGQLKLADFGLAR------------IFGSPDRRFTHQVFARWYRAPE 181
           HRD+KP+N+L+  +G ++LADFG                 G+PD           Y +PE
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD-----------YISPE 262
Query: 182 LLF----GAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQLGKIF 225
           +L     G  +YG   D W+ G C++  L    PF    S ++  GKI 
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIM 310

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15  LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+  A D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 21  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
           +   G+A+ + K  +HRD+   N ++     +K+ DFG+ R     D  R+    +    
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           + APE L     +    D+W+ G +  E+  L  +P+ QG S+   L  +        P 
Sbjct: 198 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 255
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
             P+   + D +   +   P +R  F
Sbjct: 256 NCPE--RVTDLMRMCWQFNPKMRPTF 279

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTAL 59
           + + VA +    E +G+G YG V++   +  G+ VA+K      +K      E  N   L
Sbjct: 2   MQRTVAHQITLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML 59
Query: 60  REIKLL----KELKSPHI---IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD 112
           R   +L     ++ S H    + LI  +   G+L+   +    D  + +R   I LS A 
Sbjct: 60  RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR---IVLSIAS 116
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---- 168
             +++ + + G     K  + HRD+K  N+L+  +GQ  +AD GLA +      +     
Sbjct: 117 GLAHLHIEIFGTQ--GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 169 THQVFARWYRAPELLFGAKQYGA-----GVDVWAAGCIFAELLNR 208
             +V  + Y APE+L    Q         VD+WA G +  E+  R
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15  LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+  A D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 18  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 74
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 75  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
           +   G+A+ + K  +HRD+   N ++     +K+ DFG+ R     D  R+    +    
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           + APE L     +    D+W+ G +  E+  L  +P+ QG S+   L  +        P 
Sbjct: 195 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 252
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
             P+   + D +   +   P +R  F
Sbjct: 253 NCPE--RVTDLMRMCWQFNPKMRPTF 276

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 15  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 69
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 70  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HR+++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE    A
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPE----A 177
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 236

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15  LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+  A D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 21  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
           +   G+A+ + K  +HRD+   N ++     +K+ DFG+ R     D  R+    +    
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           + APE L     +    D+W+ G +  E+  L  +P+ QG S+   L  +        P 
Sbjct: 198 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 255
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
             P+   + D +   +   P +R  F
Sbjct: 256 NCPE--RVTDLMRMCWQFNPNMRPTF 279

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++  +  + +L   +R         + +I   P       D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +G V+ A   K  + VA+K ++ G          L E  ++K L+   +++L  A
Sbjct: 23  LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKL-HA 77
Query: 80  FPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPA-DIKSYMQMTLKGLAFCHKKWVLHRDM 137
              K  ++++ EFM +  L   +++      P   +  +     +G+AF  ++  +HRD+
Sbjct: 78  VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGAGV 193
           +  N+L+ +    K+ADFGLAR+    D  +T +  A++   + APE + FG+  +    
Sbjct: 138 RAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGS--FTIKS 193
Query: 194 DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           DVW+ G +  E++   R P+  G S+ + +  +   +    P   P+  Y
Sbjct: 194 DVWSFGILLMEIVTYGRIPY-PGMSNPEVIRALERGYRMPRPENCPEELY 242

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 27  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL 81
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 82  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D   T +  A++   + APE    A
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 189
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 248

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 25  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 79
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 80  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D   T +  A++   + APE    A
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 187
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 246

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 28  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 82
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 83  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D   T +  A++   + APE    A
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 190
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 249

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTAL 59
           + + VA +    E +G+G YG V++   +  G+ VA+K      +K      E  N   L
Sbjct: 31  VQRTVARQITLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML 88
Query: 60  REIKLL----KELKSPHI---IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD 112
           R   +L     ++ S H    + LI  +   G+L+   +    D  + +R   I LS A 
Sbjct: 89  RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR---IVLSIAS 145
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---- 168
             +++ + + G     K  + HRD+K  N+L+  +GQ  +AD GLA +      +     
Sbjct: 146 GLAHLHIEIFGTQ--GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 203
Query: 169 THQVFARWYRAPELLFGAKQYGA-----GVDVWAAGCIFAELLNR 208
             +V  + Y APE+L    Q         VD+WA G +  E+  R
Sbjct: 204 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 19  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 73
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 74  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D   T +  A++   + APE    A
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 181
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 240

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 21  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 75
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 76  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D   T +  A++   + APE    A
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 183
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 242

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +G V+ A   K  + VA+K ++ G          L E  ++K L+   +++L  A
Sbjct: 196 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKL-HA 250
Query: 80  FPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPA-DIKSYMQMTLKGLAFCHKKWVLHRDM 137
              K  ++++ EFM +  L   +++      P   +  +     +G+AF  ++  +HRD+
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGAGV 193
           +  N+L+ +    K+ADFGLAR+    D  +T +  A++   + APE + FG+  +    
Sbjct: 311 RAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGS--FTIKS 366
Query: 194 DVWAAGCIFAELLN 207
           DVW+ G +  E++ 
Sbjct: 367 DVWSFGILLMEIVT 380

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 35  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 92
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 93  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL--QT 210
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTR 232

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 54  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 111
Query: 74  IELID-AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 229
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTR 251

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15  LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+  A D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 20  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 76
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 77  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
           +   G+A+ + K  +HRD+   N ++     +K+ DFG+ R     D  R+    +    
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           + APE L     +    D+W+ G +  E+  L  +P+ QG S+   L  +        P 
Sbjct: 197 WMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 254
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
             P+   + D +   +   P +R  F
Sbjct: 255 NCPE--RVTDLMRMCWQFNPKMRPTF 278

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 19  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 73
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 74  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D   T +  A++   + APE    A
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 181
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 240

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 55  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 112
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 230
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTR 252

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    +    VAIK I+ G   E      + E K++  L    +++L   
Sbjct: 32  LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 87
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + ++ E+M    L   +R          +    +   + + +   K  LHRD+ 
Sbjct: 88  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 139 PNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197
             N L+   G +K++DFGL+R +    +       F   +  PE+L  +K + +  D+WA
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWA 206
Query: 198 AGCIFAEL--LNRRPF 211
            G +  E+  L + P+
Sbjct: 207 FGVLMWEIYSLGKMPY 222

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 20  LGEGTYGVVYKA----IDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSP 71
           LGEG +G V  A    ID    K   TVA+K ++    ++ ++   + E++++K + K  
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 72  HIIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------NTNIFLSPA------DIKS 115
           +II L+ A    G L+++  +  + +L   +R         + +I   P       D+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF 173
                 +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+   
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              + APE LF  + Y    DVW+ G +  E+ 
Sbjct: 222 PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIF 253

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 28  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 85
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 86  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 203
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTR 225

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G +G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 20  ERLGAGQFGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 74
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 75  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D   T +  A++   + APE    A
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPE----A 182
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 241

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 33  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 90
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 208
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTR 230

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 36  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 93
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 211
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
            YL  + LGEG +  V        G   A+K+I   +Q++     A RE  + +    P+
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFNHPN 87
Query: 73  IIELID-AFPHKGNLH---LVFEFME-----TDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           I+ L+      +G  H   L+  F +      ++E  +++   FL+   I   +    +G
Sbjct: 88  ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER-LKDKGNFLTEDQILWLLLGICRG 146
Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG-----LARIFGSPD----RRFTHQVFA 174
           L   H K   HRD+KP N+L+G  GQ  L D G        + GS      + +  Q   
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 175 RWYRAPELLFGAKQYGA---GVDVWAAGCI-FAELLNRRPF 211
             YRAPE LF  + +       DVW+ GC+ +A +    P+
Sbjct: 207 ISYRAPE-LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 88
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 206
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTR 228

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15  LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+  A D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 21  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
           +   G+A+ + K  +HRD+   N ++     +K+ DFG+ R     D  R+    +    
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           + APE L     +    D+W+ G +  E+  L  +P+ QG S+   L  +        P 
Sbjct: 198 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 255
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
             P+   + D +   +   P +R  F
Sbjct: 256 NCPE--RVTDLMRMCWQFNPKMRPTF 279

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 35  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 92
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 93  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 210
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTR 232

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +++     +G G++G +Y   + +T + VAIK   +  +   +    L E K+ + L
Sbjct: 4   RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQL----LYESKIYRIL 59
Query: 69  KSPHIIELIDAFPHKGNLH-LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +    I  +  F  +G+ + LV + +   LE +    +  LS   +       +  + F 
Sbjct: 60  QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 119
Query: 128 HKKWVLHRDMKPNNLLIG---SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           H K  LHRD+KP+N L+G      Q+ + DFGLA+ +       THQ     YR  + L 
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS---THQHIP--YRENKNLT 174
Query: 185 GAKQYGA 191
           G  +Y +
Sbjct: 175 GTARYAS 181

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 34  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 91
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 92  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 209
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTR 231

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTAL 59
           + + VA      E +G+G YG V++   +  G+ VA+K      +K      E  N   L
Sbjct: 2   MQRTVARDITLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML 59
Query: 60  REIKLL----KELKSPHI---IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPAD 112
           R   +L     ++ S H    + LI  +   G+L+   +    D  + +R   I LS A 
Sbjct: 60  RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR---IVLSIAS 116
Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---- 168
             +++ + + G     K  + HRD+K  N+L+  +GQ  +AD GLA +      +     
Sbjct: 117 GLAHLHIEIFGTQ--GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 169 THQVFARWYRAPELLFGAKQYGA-----GVDVWAAGCIFAELLNR 208
             +V  + Y APE+L    Q         VD+WA G +  E+  R
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 18  EVLGEGTYGVVYKA-IDTKTGQTV--AIKKI-RLGKQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY   +    G+ +  A+K + R+    E   F  L E  ++K+   P++
Sbjct: 36  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 93
Query: 74  IELID-AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH-----QVFARWYRAPELLFGA 186
            +HRD+   N ++     +K+ADFGLAR     +    H     ++  +W     L    
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL--QT 211
Query: 187 KQYGAGVDVWAAGCIFAELLNR 208
           +++    DVW+ G +  EL+ R
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G VYK    K    VA+K + +             E+ +L++ +  +I+ L   
Sbjct: 32  IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 87
Query: 80  FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           +  K  L +V ++ E + L   +  +        +    + T +G+ + H K ++HRD+K
Sbjct: 88  YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 139 PNNLLIGSHGQLKLADFGLA--RIFGSPDRRFTHQVFARWYRAPEL--LFGAKQYGAGVD 194
            NN+ +     +K+ DFGLA  +   S   +F     +  + APE+  +  +  Y    D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 195 VWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           V+A G +  EL+  + P+    S+I+   +I    G  + S  PDL+
Sbjct: 208 VYAFGIVLYELMTGQLPY----SNINNRDQIIEMVGRGSLS--PDLS 248

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 7   SKKVADRYLKRE-VLGEGTYGVVYKA---IDTKTGQTVAIKKIRLG-KQKEGVNFTALRE 61
           SK++    +K E V+G G +G V      +  K    VAIK ++ G  +K+  +F  L E
Sbjct: 1   SKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDF--LSE 58
Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMT 120
             ++ +   P++I L         + ++ EFME   L++ +R  +   +   +   ++  
Sbjct: 59  ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 118
Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTH----QVFA 174
             G+ +      +HR +   N+L+ S+   K++DFGL+R     + D  +T     ++  
Sbjct: 119 AAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPF 211
           RW  APE +   +++ +  DVW+ G +  E+++   RP+
Sbjct: 179 RW-TAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGERPY 215

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
           + LG G +G V +A     G+  A+ K+ +   K   +       + E+K++  L +  +
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73  IIELIDAFPHKGNLHLVFEFM-ETDLETVIR---------------NTNIFLSPADIKSY 116
           I+ L+ A  H G + ++ E+    DL   +R               N    LS  D+  +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
                +G+AF   K  +HRD+   N+L+ +    K+ DFGLAR   + D  +  +  AR 
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARL 230
Query: 177 ---YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
              + APE +F    Y    DVW+ G +  E+ +
Sbjct: 231 PVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFS 263

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +G V+      + + VA+K ++ G          L E  L+K L+   ++ L   
Sbjct: 21  LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAV 76
Query: 80  FPHKGNLHLVFEFM-ETDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
              +  ++++ E+M +  L   +++      L P  I    Q+  +G+A+  +K  +HRD
Sbjct: 77  VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA-EGMAYIERKNYIHRD 135
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGAG 192
           ++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE + FG   +   
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGC--FTIK 191
Query: 193 VDVWAAGCIFAELLN 207
            DVW+ G +  E++ 
Sbjct: 192 SDVWSFGILLYEIVT 206

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPD- 165
           ++  D+ SY     +G+ F   +  +HRD+   N+L+  +  +K+ DFGLAR I+ +PD 
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
            R+   ++  +W  APE +F  K Y    DVW+ G +  E+ +
Sbjct: 256 VRKGDTRLPLKWM-APESIFD-KIYSTKSDVWSYGVLLWEIFS 296

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 86/211 (40%), Gaps = 13/211 (6%)
Query: 28  VYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELKSPHIIELIDAFPHKGNL 86
           VY+A DT   + VA+K        + V  T   RE +    L+ PH++ + D     G L
Sbjct: 50  VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 87  HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG 145
           ++    +   DL   +R       P  +    Q+    L   H     HRD+KP N+L+ 
Sbjct: 110 YVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIG-SALDAAHAAGATHRDVKPENILVS 168
Query: 146 SHGQLKLADFGLARIFGSPDRRFT---HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIF 202
           +     L DFG+A    + D + T   + V   +Y APE  F         D++A  C+ 
Sbjct: 169 ADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPE-RFSESHATYRADIYALTCVL 225
Query: 203 AELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
            E L   P  QG    DQL    A    A P
Sbjct: 226 YECLTGSPPYQG----DQLSVXGAHINQAIP 252

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +GVV K    +    VAIK I+ G   E      + E K++  L    +++L   
Sbjct: 17  LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 72
Query: 80  FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
              +  + ++ E+M    L   +R          +    +   + + +   K  LHRD+ 
Sbjct: 73  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQYGAGVDV 195
             N L+   G +K++DFGL+R     D  +T    +++   +  PE+L  +K + +  D+
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSRGSKFPVRWSPPEVLMYSK-FSSKSDI 189
Query: 196 WAAGCIFAEL--LNRRPF 211
           WA G +  E+  L + P+
Sbjct: 190 WAFGVLMWEIYSLGKMPY 207

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +G V+      + + VA+K ++ G          L E  L+K L+   ++ L   
Sbjct: 20  LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAV 75
Query: 80  FPHKGNLHLVFEFM-ETDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
              +  ++++ EFM +  L   +++      L P  I    Q+  +G+A+  +K  +HRD
Sbjct: 76  VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA-EGMAYIERKNYIHRD 134
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELL-FGAKQYGAG 192
           ++  N+L+      K+ADFGLAR+    D  +T +  A++   + APE + FG   +   
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGC--FTIK 190
Query: 193 VDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
            +VW+ G +  E++   + P+  G ++ D +  +   +        PD  Y
Sbjct: 191 SNVWSFGILLYEIVTYGKIPY-PGRTNADVMSALSQGYRMPRMENCPDELY 240

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 29/267 (10%)
Query: 15  LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+  A D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 21  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVF--AR 175
           +   G+A+ + K  +HRD+   N ++     +K+ DFG+ R I+ +   R   +     R
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATP 233
           W  APE L     +    D+W+ G +  E+  L  +P+ QG S+   L  +        P
Sbjct: 198 WM-APESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQP 254
Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF 260
              P+   + D +   +   P +R  F
Sbjct: 255 DNCPE--RVTDLMRMCWQFNPKMRPTF 279

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 40  VAIKKI---RLGKQKEGVNFTAL-REIKLLKELKS--PHIIELIDAFPHKGNLHLVFEFM 93
           VAIK +   R+    E  N T +  E+ LLK++ S    +I L+D F    +  L+ E  
Sbjct: 79  VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 94  E--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-SHGQL 150
           E   DL   I      L     +S+    L+ +  CH   VLHRD+K  N+LI  + G+L
Sbjct: 139 EPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 197
Query: 151 KLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
           KL DFG   +    D  +T     R Y  PE +   + +G    VW+ G +  +++
Sbjct: 198 KLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 34/240 (14%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76
           E LG G  G V+  +    G T VA+K ++ G          L E  L+K+L+   ++ L
Sbjct: 19  ERLGAGQAGEVW--MGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL 73
Query: 77  IDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL-------KGLAFCHK 129
             A   +  ++++ E+ME          +   +P+ IK  +   L       +G+AF  +
Sbjct: 74  Y-AVVTQEPIYIITEYMENG-----SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGA 186
           +  +HRD++  N+L+      K+ADFGLAR+    D   T +  A++   + APE    A
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAPE----A 181
Query: 187 KQYGAGV---DVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
             YG      DVW+ G +  E++   R P+  G ++ + +  +   +    P   P+  Y
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELY 240

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15  LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+  A D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 22  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 78
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 79  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
           +   G+A+ + K  +HR++   N ++     +K+ DFG+ R     D  R+    +    
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           + APE L     +    D+W+ G +  E+  L  +P+ QG S+   L  +        P 
Sbjct: 199 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 256
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
             P+   + D +   +   P +R  F
Sbjct: 257 NCPE--RVTDLMRMCWQFNPNMRPTF 280

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 15  LKREVLGEGTYGVVYK--AIDTKTGQT---VAIKKIRLGKQ-KEGVNFTALREIKLLKEL 68
           L RE LG+G++G+VY+  A D   G+    VA+K +      +E + F  L E  ++K  
Sbjct: 21  LLRE-LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF--LNEASVMKGF 77
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIRN------TNIFLSPADIKSYMQMTL 121
              H++ L+          +V E M   DL++ +R+       N    P  ++  +QM  
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 122 K---GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARW 176
           +   G+A+ + K  +HR++   N ++     +K+ DFG+ R     D  R+    +    
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAEL--LNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           + APE L     +    D+W+ G +  E+  L  +P+ QG S+   L  +        P 
Sbjct: 198 WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPY-QGLSNEQVLKFVMDGGYLDQPD 255
Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF 260
             P+   + D +   +   P +R  F
Sbjct: 256 NCPE--RVTDLMRMCWQFNPNMRPTF 279

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR-EIKLLKELKSPHIIELID 78
           +G G++G VYK    K    VA+K +++        F A R E+ +L++ +  +I+ L  
Sbjct: 44  IGSGSFGTVYKG---KWHGDVAVKILKVVDPTPE-QFQAFRNEVAVLRKTRHVNIL-LFM 98
Query: 79  AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM 137
            +  K NL +V ++ E + L   +           +    + T +G+ + H K ++HRDM
Sbjct: 99  GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 138 KPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAGV 193
           K NN+ +     +K+ DFGLA +    S  ++      +  + APE++       +    
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 194 DVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           DV++ G +  EL+    P+    S I+   +I    G    S  PDL+ L
Sbjct: 219 DVYSYGIVLYELMTGELPY----SHINNRDQIIFMVGRGYAS--PDLSKL 262

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           D  LK E LGEG +G V+ A     +  +    VA+K ++   +    +F   RE +LL 
Sbjct: 42  DIVLKWE-LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLT 98
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR----NTNIFLSPADIK------- 114
            L+  HI+           L +VFE+M   DL   +R    +  +     D+        
Sbjct: 99  MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 115 ---SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTH 170
              +       G+ +      +HRD+   N L+G    +K+ DFG++R I+ +   R   
Sbjct: 159 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 218
Query: 171 QVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSS 216
           +     RW     +L+  +++    DVW+ G +  E+    ++P+ Q S+
Sbjct: 219 RTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 39/292 (13%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-- 75
           EV   G +G V+KA      + VA+K   +  ++   N     E+  L  +K  +I++  
Sbjct: 30  EVKARGRFGCVWKA--QLLNEYVAVKIFPIQDKQSWQNEY---EVYSLPGMKHENILQFI 84
Query: 76  --------------LIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
                         LI AF  KG+L    +F++ ++ +     +I  + A   +Y+   +
Sbjct: 85  GAEKRGTSVDVDLWLITAFHEKGSLS---DFLKANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRA 179
            GL   HK  + HRD+K  N+L+ ++    +ADFGLA  F  G        QV  R Y A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 180 PELLFGAKQYGAG----VDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           PE+L GA  +       +D++A G +  EL +R     G  D     +    F      Q
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD-----EYMLPF-EEEIGQ 255
Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDAL--DLLSKMFTYDPKARITA 285
            P L  + + V ++    P LR  +   +  A+  + + + + +D +AR++A
Sbjct: 256 HPSLEDMQEVVVHKK-KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           D  LK E LGEG +G V+ A     +  +    VA+K ++   +    +F   RE +LL 
Sbjct: 13  DIVLKWE-LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLT 69
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR----NTNIFLSPADIK------- 114
            L+  HI+           L +VFE+M   DL   +R    +  +     D+        
Sbjct: 70  MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 115 ---SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTH 170
              +       G+ +      +HRD+   N L+G    +K+ DFG++R I+ +   R   
Sbjct: 130 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 189
Query: 171 QVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSS 216
           +     RW     +L+  +++    DVW+ G +  E+    ++P+ Q S+
Sbjct: 190 RTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 237

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 14/199 (7%)
Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI----RLGKQKEGVNFTALREIKLLKELKS---- 70
           +LG+G +G V+          VAIK I     LG      + T   E+ LL ++ +    
Sbjct: 38  LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 71  PHIIELIDAFPHKGNLHLVFE--FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
           P +I L+D F  +    LV E      DL   I      L     + +    +  +  CH
Sbjct: 98  PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHCH 156
Query: 129 KKWVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
            + V+HRD+K  N+LI    G  KL DFG   +    D  +T     R Y  PE +   +
Sbjct: 157 SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH--DEPYTDFDGTRVYSPPEWISRHQ 214
Query: 188 QYGAGVDVWAAGCIFAELL 206
            +     VW+ G +  +++
Sbjct: 215 YHALPATVWSLGILLYDMV 233

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 16/227 (7%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G VYK    K    VA+K + +             E+ +L++ +  +I+ L   
Sbjct: 32  IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 87
Query: 80  FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138
           +     L +V ++ E + L   +  +        +    + T +G+ + H K ++HRD+K
Sbjct: 88  YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 139 PNNLLIGSHGQLKLADFGLA--RIFGSPDRRFTHQVFARWYRAPEL--LFGAKQYGAGVD 194
            NN+ +     +K+ DFGLA  +   S   +F     +  + APE+  +  +  Y    D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 195 VWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           V+A G +  EL+  + P+    S+I+   +I    G  + S  PDL+
Sbjct: 208 VYAFGIVLYELMTGQLPY----SNINNRDQIIEMVGRGSLS--PDLS 248

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 12  DRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           D  LK E LGEG +G V+ A     +  +    VA+K ++   +    +F   RE +LL 
Sbjct: 19  DIVLKWE-LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLT 75
Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFM-ETDLETVIR----NTNIFLSPADIK------- 114
            L+  HI+           L +VFE+M   DL   +R    +  +     D+        
Sbjct: 76  MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 115 ---SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTH 170
              +       G+ +      +HRD+   N L+G    +K+ DFG++R I+ +   R   
Sbjct: 136 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 195
Query: 171 QVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSS 216
           +     RW     +L+  +++    DVW+ G +  E+    ++P+ Q S+
Sbjct: 196 RTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 243

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKEL 68
           D  L R +LGEG +G VY+ + T   G+ + +  ++  K+   ++     + E  ++K L
Sbjct: 25  DVVLNR-ILGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
             PHI++LI     +    ++  +   +L   +      L    +  Y     K +A+  
Sbjct: 83  DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGA 186
               +HRD+   N+L+ S   +KL DFGL+R     D  +    ++  +W     + F  
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF-- 200
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFL 212
           +++    DVW       E+L+  ++PF 
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFF 228

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 21  GEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLKELKSPHIIELID 78
           GEG +GVVYK     T  TVA+KK+   +    E +     +EIK+  + +  +++EL+ 
Sbjct: 31  GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 79  AFPHKGNLHLVFEFMET----DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                 +L LV+ +       D  + +  T   LS        Q    G+ F H+   +H
Sbjct: 89  FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP-LSWHXRCKIAQGAANGINFLHENHHIH 147
Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF------ARWYRAPELLFGAKQ 188
           RD+K  N+L+      K++DFGLAR       +F   V          Y APE L G  +
Sbjct: 148 RDIKSANILLDEAFTAKISDFGLAR----ASEKFAQXVXXSRIVGTTAYXAPEALRG--E 201
Query: 189 YGAGVDVWAAGCIFAELLNRRP 210
                D+++ G +  E++   P
Sbjct: 202 ITPKSDIYSFGVVLLEIITGLP 223

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKEL 68
           D  L R +LGEG +G VY+ + T   G+ + +  ++  K+   ++     + E  ++K L
Sbjct: 13  DVVLNR-ILGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
             PHI++LI     +    ++  +   +L   +      L    +  Y     K +A+  
Sbjct: 71  DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGA 186
               +HRD+   N+L+ S   +KL DFGL+R     D  +    ++  +W     + F  
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF-- 188
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFL 212
           +++    DVW       E+L+  ++PF 
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFF 216

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
           + LG G +G V +A     G+  A+ K+ +   K   +       + E+K++  L +  +
Sbjct: 44  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 73  IIELIDAFPHKGNLHLVFEFM-------------ETDLETVIRNTNIFLSPADIKSYMQM 119
           I+ L+ A  H G + ++ E+              E DL+   +     L   D+  +   
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD---KEDGRPLELRDLLHFSSQ 160
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--- 176
             +G+AF   K  +HRD+   N+L+ +    K+ DFGLAR   + D  +  +  AR    
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARLPVK 219
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           + APE +F    Y    DVW+ G +  E+ +
Sbjct: 220 WMAPESIFDCV-YTVQSDVWSYGILLWEIFS 249

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 106/212 (50%), Gaps = 11/212 (5%)
Query: 4   VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK 63
           VDL ++  + +  + ++G G +G VYK +  + G  VA+K+ R  +  +G+      EI+
Sbjct: 32  VDL-EEATNNFDHKFLIGHGVFGKVYKGV-LRDGAKVALKR-RTPESSQGIE-EFETEIE 87
Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL- 121
            L   + PH++ LI     +  + L++++ME  +L+  +  +++       +  +++ + 
Sbjct: 88  TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 122 --KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF--ARWY 177
             +GL + H + ++HRD+K  N+L+  +   K+ DFG+++     D+     V      Y
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRR 209
             PE  F   +     DV++ G +  E+L  R
Sbjct: 208 IDPE-YFIKGRLTEKSDVYSFGVVLFEVLCAR 238

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 12  DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKEL 68
           D  L R +LGEG +G VY+ + T   G+ + +  ++  K+   ++     + E  ++K L
Sbjct: 9   DVVLNR-ILGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
             PHI++LI     +    ++  +   +L   +      L    +  Y     K +A+  
Sbjct: 67  DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGA 186
               +HRD+   N+L+ S   +KL DFGL+R     D  +    ++  +W     + F  
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF-- 184
Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFL 212
           +++    DVW       E+L+  ++PF 
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFF 212

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF----TALREIKLLKEL-KSPH 72
           + LG G +G V +A     G+  A+ K+ +   K   +       + E+K++  L +  +
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73  IIELIDAFPHKGNLHLVFEFM-------------ETDLETVIRNTNIFLSPADIKSYMQM 119
           I+ L+ A  H G + ++ E+              E DL+   +     L   D+  +   
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD---KEDGRPLELRDLLHFSSQ 168
Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW--- 176
             +G+AF   K  +HRD+   N+L+ +    K+ DFGLAR   + D  +  +  AR    
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSNYIVKGNARLPVK 227
Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207
           + APE +F    Y    DVW+ G +  E+ +
Sbjct: 228 WMAPESIFDCV-YTVQSDVWSYGILLWEIFS 257

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 19/191 (9%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           LG G +G V+ A   K  + VA+K ++ G          L E  ++K L+   +++L  A
Sbjct: 190 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKL-HA 244
Query: 80  FPHKGNLHLVFEFM-ETDLETVIRNTNIFLSPA-DIKSYMQMTLKGLAFCHKKWVLHRDM 137
              K  ++++ EFM +  L   +++      P   +  +     +G+AF  ++  +HRD+
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL-FGAKQYGAGVDVW 196
           +  N+L+ +    K+ADFGLAR+      ++T         APE + FG+  +    DVW
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGS--FTIKSDVW 353
Query: 197 AAGCIFAELLN 207
           + G +  E++ 
Sbjct: 354 SFGILLMEIVT 364

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E+   G +G V+KA        VA+K   L  ++   ++ + REI     +K  ++++ I
Sbjct: 21  EIKARGRFGCVWKA--QLMNDFVAVKIFPLQDKQ---SWQSEREIFSTPGMKHENLLQFI 75
Query: 78  DAFPHKGNLH----LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK--W 131
            A     NL     L+  F +    T     NI ++  ++    +   +GL++ H+   W
Sbjct: 76  AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI-ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 132 ---------VLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAP 180
                    + HRD K  N+L+ S     LADFGLA  F  G P      QV  R Y AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 181 ELLFGAKQYGAG----VDVWAAGCIFAELLNRRPFLQGSSD 217
           E+L GA  +       +D++A G +  EL++R     G  D
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G VYK    K    VA+K + +             E+ +L++ +  +I+ L   
Sbjct: 43  IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 98
Query: 80  FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM---TLKGLAFCHKKWVLHRD 136
           +  K  L +V ++ E    ++  + +I  +  ++   + +   T +G+ + H K ++HRD
Sbjct: 99  YSTKPQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 156
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAG 192
           +K NN+ +     +K+ DFGLA +    S   +F     +  + APE++    +  Y   
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
            DV+A G +  EL+  + P+    S+I+   +I    G    S  PDL+
Sbjct: 217 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIFMVGRGYLS--PDLS 259

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G VYK    K    VA+K + +             E+ +L++ +  +I+ L   
Sbjct: 44  IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 99
Query: 80  FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM---TLKGLAFCHKKWVLHRD 136
           +  K  L +V ++ E    ++  + +I  +  ++   + +   T +G+ + H K ++HRD
Sbjct: 100 YSTKPQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAG 192
           +K NN+ +     +K+ DFGLA +    S   +F     +  + APE++    +  Y   
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
            DV+A G +  EL+  + P+    S+I+   +I    G    S  PDL+
Sbjct: 218 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIFMVGRGYLS--PDLS 260

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G VYK    K    VA+K + +             E+ +L++ +  +I+ L   
Sbjct: 21  IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 76
Query: 80  FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM---TLKGLAFCHKKWVLHRD 136
           +  K  L +V ++ E    ++  + +I  +  ++   + +   T +G+ + H K ++HRD
Sbjct: 77  YSTKPQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAG 192
           +K NN+ +     +K+ DFGLA +    S   +F     +  + APE++    +  Y   
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
            DV+A G +  EL+  + P+    S+I+   +I    G    S  PDL+
Sbjct: 195 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIFMVGRGYLS--PDLS 237

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 20  LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA 79
           +G G++G VYK    K    VA+K + +             E+ +L++ +  +I+ L   
Sbjct: 18  IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 73
Query: 80  FPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM---TLKGLAFCHKKWVLHRD 136
           +  K  L +V ++ E    ++  + +I  +  ++   + +   T +G+ + H K ++HRD
Sbjct: 74  YSTKPQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 131
Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQ--YGAG 192
           +K NN+ +     +K+ DFGLA +    S   +F     +  + APE++    +  Y   
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 193 VDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
            DV+A G +  EL+  + P+    S+I+   +I    G    S  PDL+
Sbjct: 192 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIFMVGRGYLS--PDLS 234
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	397
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	0.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-180
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-177
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-177
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-175
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-174
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-173
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-172
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-169
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-166
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-165
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-164
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-159
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-143
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-128
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-124
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-114
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-112
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-111
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-107
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-103
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-102
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-101
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-99
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-98
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-96
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-94
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	6e-92
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-90
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-89
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-69
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	7e-69
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	9e-67
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-65
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-64
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-64
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-63
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-62
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-62
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-62
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-62
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-62
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-61
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-61
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-61
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-61
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-61
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-61
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-61
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-61
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-60
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-60
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-60
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-60
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-60
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-60
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-60
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-60
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-59
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-59
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-59
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-59
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-59
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-59
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	5e-59
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-59
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	9e-59
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-58
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-58
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-58
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-58
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-57
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-57
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	7e-57
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-56
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	7e-56
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	7e-56
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-55
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-54
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-54
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-53
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	9e-53
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-52
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-52
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-52
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-52
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-51
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-51
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-51
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-51
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-51
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-51
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-50
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-49
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-49
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-49
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-49
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-48
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-48
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-47
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-47
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-47
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-47
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-45
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-45
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-45
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-45
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-45
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	8e-45
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-45
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-44
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-44
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-44
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-43
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-43
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-43
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-43
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-42
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-42
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-42
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	8e-42
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-39
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-38
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-38
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-38
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-37
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-37
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-35
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-35
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-35
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-13
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-33
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-32
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-32
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-32
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	6e-32
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-32
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-31
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-31
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-31
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-31
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-31
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-30
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-30
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-30
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-29
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-29
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-28
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-28
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-28
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-27
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	6e-27
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-26
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-26
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-26
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-25
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-25
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-25
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-25
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-25
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-25
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-24
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-23
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-23
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-23
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-23
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-23
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	6e-23
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-23
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	8e-23
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-22
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-22
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-22
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-22
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-22
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	6e-22
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-22
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	9e-22
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-21
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-21
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-21
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-21
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-21
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-21
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-21
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-20
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-20
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-20
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-20
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-20
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-20
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-20
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-20
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-20
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-20
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-20
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-20
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-20
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-20
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-20
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	6e-20
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-20
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-20
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-19
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-19
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-19
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-19
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-19
4aoj_A	329	High affinity nerve growth factor receptor; transf	7e-19
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-19
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-18
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-18
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-18
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-18
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	4e-18
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	9e-18
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-17
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-17
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-17
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	5e-17
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-17
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-17
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	6e-17
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-17
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-16
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-16
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-16
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-16
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-16
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-16
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-16
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-16
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-15
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	4e-12
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  533 bits (1375), Expect = 0.0
 Identities = 185/348 (53%), Positives = 238/348 (68%), Gaps = 5/348 (1%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG---KQKEGVNFT 57
           MA +D+  +   RY K + LGEG +  VYKA D  T Q VAIKKI+LG   + K+G+N T
Sbjct: 1   MA-LDVKSRA-KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRT 58

Query: 58  ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYM 117
           ALREIKLL+EL  P+II L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM
Sbjct: 59  ALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYM 118

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
            MTL+GL + H+ W+LHRD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWY
Sbjct: 119 LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWY 178

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           RAPELLFGA+ YG GVD+WA GCI AELL R PFL G SD+DQL +IF   GT T  QWP
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
           D+  LPDYV ++     PL  +F +A DD LDL+  +F ++P ARITA QAL+ +YFS+ 
Sbjct: 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298

Query: 298 PLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGF 345
           P PT   +LPRP     +     NP             +  +P +  F
Sbjct: 299 PGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF 346

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  502 bits (1295), Expect = e-180
 Identities = 116/305 (38%), Positives = 159/305 (52%), Gaps = 3/305 (0%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y K   +GEG+YGVV+K  +  TGQ VAIKK    +    +   ALREI++LK+LK P
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +++ L++ F  K  LHLVFE+ +  +   +      +    +KS    TL+ + FCHK  
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
            +HRD+KP N+LI  H  +KL DFG AR+   P   +  +V  RWYR+PELL G  QYG 
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGP 182

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY--- 248
            VDVWA GC+FAELL+  P   G SD+DQL  I    G   P      +    +      
Sbjct: 183 PVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIP 242

Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPR 308
                 PL   FP+ S  AL LL      DP  R+T +Q L H YF +     +  K   
Sbjct: 243 DPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAKEHD 302

Query: 309 PATKR 313
              + 
Sbjct: 303 KPAEN 307

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  493 bits (1272), Expect = e-177
 Identities = 139/291 (47%), Positives = 182/291 (62%), Gaps = 2/291 (0%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
            +Y K E +GEGTYG V+KA + +T + VA+K++RL    EGV  +ALREI LLKELK  
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I+ L D       L LVFEF + DL+    + N  L P  +KS++   LKGL FCH + 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI  +G+LKLA+FGLAR FG P R ++ +V   WYR P++LFGAK Y  
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181

Query: 192 GVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-Q 249
            +D+W+AGCIFAEL N  RP   G+   DQL +IF   GT T  QWP +  LPDY  Y  
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241

Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           Y A   L ++ P  +    DLL  +   +P  RI+A++AL+H YFS    P
Sbjct: 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  490 bits (1264), Expect = e-175
 Identities = 101/316 (31%), Positives = 155/316 (49%), Gaps = 3/316 (0%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           +   +L  +  ++Y    ++GEG+YG+V K  +  TG+ VAIKK       + V   A+R
Sbjct: 14  LGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR 73

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT 120
           EIKLLK+L+  +++ L++    K   +LVFEF++  +   +      L    ++ Y+   
Sbjct: 74  EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           + G+ FCH   ++HRD+KP N+L+   G +KL DFG AR   +P   +  +V  RWYRAP
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ELL G  +YG  VDVWA GC+  E+    P   G SDIDQL  I    G   P       
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253

Query: 241 YLPDYVEY---QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
             P +      +     PL   +P  S+  +DL  K    DP  R    + L H +F   
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313

Query: 298 PLPTEPNKLPRPATKR 313
                 ++  +   ++
Sbjct: 314 GFAERFSQELQLKVQK 329

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  487 bits (1256), Expect = e-174
 Identities = 139/293 (47%), Positives = 187/293 (63%), Gaps = 3/293 (1%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           + + ++Y K E +GEGTYGVVYKA D   G+ VA+K+IRL  + EG+  TA+REI LLKE
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           L  P+I+ LID    +  L LVFEFME DL+ V+      L  + IK Y+   L+G+A C
Sbjct: 76  LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           H+  +LHRD+KP NLLI S G LKLADFGLAR FG P R +TH+V   WYRAP++L G+K
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           +Y   VD+W+ GCIFAE++  +P   G +D DQL KIF+  GT  P +WP +  LP + +
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255

Query: 248 YQY--VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
             +      P  S+ P    + +DLLS M  +DP  RI+A+ A+ H YF    
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  484 bits (1248), Expect = e-173
 Identities = 133/285 (46%), Positives = 180/285 (63%), Gaps = 2/285 (0%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y   E +GEGTYGVVYKA +   G+T A+KKIRL K+ EG+  T +REI +LKELK  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I++L D    K  L LVFE ++ DL+ ++      L     KS++   L G+A+CH + 
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LK+ADFGLAR FG P R++TH++   WYRAP++L G+K+Y  
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY-VEYQY 250
            +D+W+ GCIFAE++N  P   G S+ DQL +IF   GT     WP++  LP Y   +  
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
               P  S      +  +DLLSKM   DP  RITA+QALEH YF 
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  483 bits (1245), Expect = e-172
 Identities = 118/316 (37%), Positives = 177/316 (56%), Gaps = 5/316 (1%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + Y+K + LGEGTY  VYK     T   VA+K+IRL + +EG   TA+RE+ LLK+LK  
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHA 60

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I+ L D    + +L LVFE+++ DL+  + +    ++  ++K ++   L+GLA+CH++ 
Sbjct: 61  NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LKLADFGLAR    P + + ++V   WYR P++L G+  Y  
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251
            +D+W  GCIF E+   RP   GS+  +QL  IF   GT T   WP +    ++  Y Y 
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP 240

Query: 252 AAPP--LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
                 L S  P    D  DLL+K+  ++ + RI+A+ A++H +F S         LP  
Sbjct: 241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHK--LPDT 298

Query: 310 ATKRASKASDFNPQEG 325
            +  A K      +  
Sbjct: 299 TSIFALKEIQLQKEAS 314

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  475 bits (1225), Expect = e-169
 Identities = 117/314 (37%), Positives = 170/314 (54%), Gaps = 12/314 (3%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           + ++ + E LG GTY  VYK ++  TG  VA+K+++L   +EG   TA+REI L+KELK 
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLD-SEEGTPSTAIREISLMKELKH 62

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF-----LSPADIKSYMQMTLKGLA 125
            +I+ L D    +  L LVFEFM+ DL+  + +  +      L    +K +    L+GLA
Sbjct: 63  ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG 185
           FCH+  +LHRD+KP NLLI   GQLKL DFGLAR FG P   F+ +V   WYRAP++L G
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182

Query: 186 AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
           ++ Y   +D+W+ GCI AE++  +P   G++D +QL  IF   GT   S WP +  LP Y
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242

Query: 246 -VEYQYVAAPPLRSLFPSA-----SDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
               Q      LR +           + +D L  +   +P  R++A+QAL H +F+    
Sbjct: 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302

Query: 300 PTEPNKLPRPATKR 313
                         
Sbjct: 303 HASMGGSRSHHHHH 316

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  468 bits (1207), Expect = e-166
 Identities = 136/296 (45%), Positives = 181/296 (61%), Gaps = 8/296 (2%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           DRY +   LGEGTYG VYKAIDT T +TVAIK+IRL  ++EGV  TA+RE+ LLKEL+  
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +IIEL     H   LHL+FE+ E DL+  + + N  +S   IKS++   + G+ FCH + 
Sbjct: 94  NIIELKSVIHHNHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGVNFCHSRR 152

Query: 132 VLHRDMKPNNLLI-----GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
            LHRD+KP NLL+          LK+ DFGLAR FG P R+FTH++   WYR PE+L G+
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212

Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           + Y   VD+W+  CI+AE+L + P   G S+IDQL KIF   G    + WP +  LPD+ 
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272

Query: 247 EY--QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           +   ++      R L     D+ LDLL+ M   DP  RI+A+ ALEH YFS     
Sbjct: 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD 328

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  463 bits (1195), Expect = e-165
 Identities = 119/324 (36%), Positives = 170/324 (52%), Gaps = 13/324 (4%)

Query: 3   EVDLSKKVADRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALRE 61
           E D   +   +Y     +GEG YG V+KA D K  G+ VA+K++R+   +EG+  + +RE
Sbjct: 2   EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61

Query: 62  IKLLKELKS---PHIIELIDAF-----PHKGNLHLVFEFMETDLETVIRNT-NIFLSPAD 112
           + +L+ L++   P+++ L D         +  L LVFE ++ DL T +       +    
Sbjct: 62  VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 121

Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172
           IK  M   L+GL F H   V+HRD+KP N+L+ S GQ+KLADFGLARI+       T  V
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVV 180

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT 232
              WYRAPE+L  +  Y   VD+W+ GCIFAE+  R+P  +GSSD+DQLGKI    G   
Sbjct: 181 VTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239

Query: 233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR 292
              WP    LP    +   +A P+        +   DLL K  T++P  RI+A  AL H 
Sbjct: 240 EEDWPRDVALPRQAFHSK-SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298

Query: 293 YFSSAPLPTEPNKLPRPATKRASK 316
           YF       E      P ++  S+
Sbjct: 299 YFQDLERCKENLDSHLPPSQNTSE 322

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  462 bits (1191), Expect = e-164
 Identities = 127/343 (37%), Positives = 186/343 (54%), Gaps = 27/343 (7%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
             +Y K   +G+GT+G V+KA   KTGQ VA+KK+ +  +KEG   TALREIK+L+ LK 
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75

Query: 71  PHIIELID--------AFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
            +++ LI+            KG+++LVF+F E DL  ++ N  +  + ++IK  MQM L 
Sbjct: 76  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR----RFTHQVFARWYR 178
           GL + H+  +LHRDMK  N+LI   G LKLADFGLAR F         R+T++V   WYR
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR 195

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
            PELL G + YG  +D+W AGCI AE+  R P +QG+++  QL  I    G+ TP  WP+
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 255

Query: 239 LAYLPDYVEYQYVAAPP--LRSLFPS--ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           +     Y + + V      ++    +      ALDL+ K+   DP  RI +  AL H +F
Sbjct: 256 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315

Query: 295 SSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRR 337
            S P+P++   +              +       L+PPR+   
Sbjct: 316 WSDPMPSDLKGMLS-----------THLTSMFEYLAPPRRKHH 347

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  450 bits (1160), Expect = e-159
 Identities = 111/303 (36%), Positives = 159/303 (52%), Gaps = 15/303 (4%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG---VNFTALREIKLLKEL 68
            RY     +G G YG VYKA D  +G  VA+K +R+     G   +  + +RE+ LL+ L
Sbjct: 9   SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68

Query: 69  KS---PHIIELIDAF-----PHKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQM 119
           ++   P+++ L+D         +  + LVFE ++ DL T +       L    IK  M+ 
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 128

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            L+GL F H   ++HRD+KP N+L+ S G +KLADFGLARI+       T  V   WYRA
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALTPVVVTLWYRA 187

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PE+L  +  Y   VD+W+ GCIFAE+  R+P   G+S+ DQLGKIF   G      WP  
Sbjct: 188 PEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
             LP           P++S+ P   +    LL +M T++P  RI+A +AL+H Y      
Sbjct: 247 VSLPRGAFPPR-GPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 305

Query: 300 PTE 302
             E
Sbjct: 306 NPE 308

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  411 bits (1059), Expect = e-143
 Identities = 118/385 (30%), Positives = 173/385 (44%), Gaps = 48/385 (12%)

Query: 8   KKVADRYLK-REVLGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           ++V D +      +G GTYG VYKA   D K  +  A+K+I       G++ +A REI L
Sbjct: 16  ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE----GTGISMSACREIAL 71

Query: 65  LKELKSPHIIELIDAFPHKGN--LHLVFEFMETDLETVIR--------NTNIFLSPADIK 114
           L+ELK P++I L   F    +  + L+F++ E DL  +I+           + L    +K
Sbjct: 72  LRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK 131

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLARIFGSPDRRFTH 170
           S +   L G+ + H  WVLHRD+KP N+L+       G++K+AD G AR+F SP +    
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191

Query: 171 ---QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI--------- 218
               V   WYRAPELL GA+ Y   +D+WA GCIFAELL   P      +          
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251

Query: 219 DQLGKIFAAFGTATPSQWPDLAYLPDYVEY----------QYVAAPPLRSLFPSASDDAL 268
           DQL +IF   G      W D+  +P++                    +          A 
Sbjct: 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF 311

Query: 269 DLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT--KRASKASDFNPQEGP 326
            LL K+ T DP  RIT++QA++  YF   PLPT            KR     +    +G 
Sbjct: 312 HLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGD 371

Query: 327 TVLSPPRKTRRVMPDREGFEGNANR 351
                 ++ ++      G     N+
Sbjct: 372 ---KKNQQQQQGNNHTNGTGHPGNQ 393

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  375 bits (965), Expect = e-128
 Identities = 112/388 (28%), Positives = 176/388 (45%), Gaps = 33/388 (8%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
            +     Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE+++++
Sbjct: 49  DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMR 102

Query: 67  ELKSPHIIELIDAFPHKGN------LHLVFEFMETDLETVIR---NTNIFLSPADIKSYM 117
           +L   +I+ L   F   G       L+LV +++   +  V R        L    +K YM
Sbjct: 103 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 162

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFTHQVFARW 176
               + LA+ H   + HRD+KP NLL+      LKL DFG A+            + +R+
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSRY 221

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
           YRAPEL+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q 
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281

Query: 237 PDLAYLPDYVEY---QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
            ++   P+Y E+   Q  A P  +   P    +A+ L S++  Y P AR+T  +A  H +
Sbjct: 282 REM--NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339

Query: 294 FSSAPLPTE--PNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANR 351
           F     P    PN    P         +F  QE   + S P     ++P     +  A+ 
Sbjct: 340 FDELRDPNVKLPNGRDTP------ALFNFTTQE---LSSNPPLATILIPPHARIQAAAST 390

Query: 352 TDKIEEHAGETKNADGEIAGRNEQVPTS 379
                  +       G+         ++
Sbjct: 391 PTNATAASDANTGDRGQTNNAASASASN 418

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  363 bits (934), Expect = e-124
 Identities = 110/361 (30%), Positives = 183/361 (50%), Gaps = 30/361 (8%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
            ++    Y   +V+G G++GVV++A   ++ + VAIKK+   K+ +       RE+++++
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN------RELQIMR 87

Query: 67  ELKSPHIIELIDAFPHKGN------LHLVFEFMETDLETVIR---NTNIFLSPADIKSYM 117
            +K P++++L   F   G+      L+LV E++   +    R        +    IK YM
Sbjct: 88  IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM 147

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
              L+ LA+ H   + HRD+KP NLL+    G LKL DFG A+I           + +R+
Sbjct: 148 YQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSYICSRY 206

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
           YRAPEL+FGA  Y   +D+W+ GC+ AEL+  +P   G S IDQL +I    GT +  Q 
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266

Query: 237 PDLAYLPDYVEYQY--VAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
             +   P+Y+E+++  +   P   +F P    DA+DL+S++  Y P AR+TA +AL H +
Sbjct: 267 KTM--NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324

Query: 294 FSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTD 353
           F    L T   ++  P  +      ++  +E   +   P    R++P     E  +   D
Sbjct: 325 F--DELRTGEARM--PNGRELPPLFNWTKEE---LSVRPDLISRLVPQHAEAELLSRGID 377

Query: 354 K 354
            
Sbjct: 378 V 378

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  336 bits (863), Expect = e-114
 Identities = 98/302 (32%), Positives = 157/302 (51%), Gaps = 25/302 (8%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
             D Y     LG G Y  V++AI+    + V +K ++  K+K+       REIK+L+ L+
Sbjct: 34  NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLR 88

Query: 70  S-PHIIELIDAF--PHKGNLHLVFEF-METDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
             P+II L D    P      LVFE    TD + + +     L+  DI+ YM   LK L 
Sbjct: 89  GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALD 144

Query: 126 FCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           +CH   ++HRD+KP+N++I   H +L+L D+GLA  F  P + +  +V +R+++ PELL 
Sbjct: 145 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLV 203

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPD---LA 240
             + Y   +D+W+ GC+ A ++ R+ PF  G  + DQL +I    GT     + D   + 
Sbjct: 204 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263

Query: 241 YLPDYVE-YQYVAAPPLRSLFPS-----ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
             P + +     +         S      S +ALD L K+  YD ++R+TA++A+EH YF
Sbjct: 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

Query: 295 SS 296
            +
Sbjct: 324 YT 325

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  332 bits (853), Expect = e-112
 Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 38/342 (11%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           S+K  DR+    + G+GT+G V    +  TG +VAIKK+    +         RE+++++
Sbjct: 18  SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR------FRNRELQIMQ 71

Query: 67  ELKS---PHIIELIDAFPHKGN-------LHLVFEFMETDLETVIR---NTNIFLSPADI 113
           +L     P+I++L   F   G        L++V E++   L    R      +   P  I
Sbjct: 72  DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILI 131

Query: 114 KSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDRRFTH 170
           K ++   ++ +   H     V HRD+KP+N+L+  + G LKL DFG A+   SP      
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL-SPSEPNVA 190

Query: 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT 230
            + +R+YRAPEL+FG + Y   VD+W+ GCIFAE++   P  +G +   QL +I    G 
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250

Query: 231 ATPSQWPDLAYLPDYVEYQY--VAAPPLRSLF----PSASDDALDLLSKMFTYDPKARIT 284
            +      L   P + +         P  ++F       + +A DLLS +  Y P+ R+ 
Sbjct: 251 PSREVLRKLN--PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMK 308

Query: 285 AQQALEHRYFSS--APLPTEPNKLPRPATKRASKASDFNPQE 324
             +AL H YF     P    PN    P          F P E
Sbjct: 309 PYEALCHPYFDELHDPATKLPNNKDLPEDL-----FRFLPNE 345

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  329 bits (846), Expect = e-111
 Identities = 99/383 (25%), Positives = 169/383 (44%), Gaps = 61/383 (15%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
             + +Y   + LG G++G+V +  D ++G+  A+KK+    +         RE+ ++K L
Sbjct: 4   TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVL 57

Query: 69  KSPHIIELIDAFPHKGN--------------------------------------LHLVF 90
              +II+L+D F   G+                                      L+++ 
Sbjct: 58  DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117

Query: 91  EFMETDLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH 147
           E++   L  V++    +   +    I  Y+    + + F H   + HRD+KP NLL+ S 
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSK 177

Query: 148 -GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206
              LKL DFG A+    P       + +R+YRAPEL+ GA +Y   +D+W+ GC+F EL+
Sbjct: 178 DNTLKLCDFGSAKKL-IPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236

Query: 207 NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY--VAAPPLRSLFPSAS 264
             +P   G + IDQL +I    GT T  Q   +   P Y E ++  + A   R + P  +
Sbjct: 237 LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHYTEVRFPTLKAKDWRKILPEGT 294

Query: 265 D-DALDLLSKMFTYDPKARITAQQALEHRYFSS----APLPTEPN-KLPRPATKRASKAS 318
              A+DLL ++  Y+P  RI   +A+ H +F           + N   P    +   +  
Sbjct: 295 PSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLF 354

Query: 319 DFNPQEGPTVLSPPRKTRRVMPD 341
           +F+P E    + P     R++P 
Sbjct: 355 NFSPYE--LSIIPGNVLNRILPK 375

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  322 bits (826), Expect = e-107
 Identities = 108/353 (30%), Positives = 157/353 (44%), Gaps = 67/353 (18%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           + DRY  R ++G G+YG V +A D    + VAIKKI    +        LREI +L  L 
Sbjct: 51  IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110

Query: 70  SPHIIELIDAFPHKGN-----LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             H+++++D    K       L++V E  ++D + + R T ++L+   IK+ +   L G+
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR-TPVYLTELHIKTLLYNLLVGV 169

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------------- 165
            + H   +LHRD+KP N L+     +K+ DFGLAR    P+                   
Sbjct: 170 KYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229

Query: 166 --------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN---------- 207
                   R+ T  V  RWYRAPEL+   + Y   +DVW+ GCIFAELLN          
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHA 289

Query: 208 -RRPFLQGSS--------------------DIDQLGKIFAAFGTATPSQWPDLA--YLPD 244
            R P   GSS                    + DQL  IF   GT +      L       
Sbjct: 290 DRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKR 349

Query: 245 YVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
           Y+  +       L   FP++S DA+ LL +M  ++P  RIT  + L H +F  
Sbjct: 350 YIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  308 bits (791), Expect = e-103
 Identities = 110/322 (34%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN--FT-------ALR 60
           +   Y  +  +  G+YG V   +D+  G  VAIK++             +        LR
Sbjct: 20  MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78

Query: 61  EIKLLKELKSPHIIELIDAFPHKGN-----LHLVFEFMETDLETVIRNTNIFLSPADIKS 115
           EI+LL     P+I+ L D F H        L+LV E M TDL  VI +  I +SP  I+ 
Sbjct: 79  EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138

Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175
           +M   L GL   H+  V+HRD+ P N+L+  +  + + DF LAR   + D   TH V  R
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED-TADANKTHYVTHR 197

Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           WYRAPEL+   K +   VD+W+AGC+ AE+ NR+   +GS+  +QL KI    GT     
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE- 256

Query: 236 WPDLAYLP-----DYVEYQ--YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
             D+         DY+      V A    ++ P+A   ALDL++KM  ++P+ RI+ +QA
Sbjct: 257 --DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314

Query: 289 LEHRYFSSAPLPT-EPNKLPRP 309
           L H YF S   P      L   
Sbjct: 315 LRHPYFESLFDPLDLTEGLSER 336

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  306 bits (785), Expect = e-102
 Identities = 114/315 (36%), Positives = 157/315 (49%), Gaps = 40/315 (12%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-------ALREI 62
           ++  +  + +LGEG YGVV  A    TG+ VAIKKI          F         LREI
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--------PFDKPLFALRTLREI 60

Query: 63  KLLKELKSPHIIELIDAF--PHKGNLH---LVFEFMETDLETVIRNTNIFLSPADIKSYM 117
           K+LK  K  +II + +        N +   ++ E M+TDL  VI      LS   I+ ++
Sbjct: 61  KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM--LSDDHIQYFI 118

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ------ 171
             TL+ +   H   V+HRD+KP+NLLI S+  LK+ DFGLARI        +        
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178

Query: 172 ----VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
               V  RWYRAPE++  + +Y   +DVW+ GCI AEL  RRP   G     QL  IF  
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238

Query: 228 FGTATPSQWPDLAYLP-----DYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA 281
            G  TP    DL  +      +Y++      A PL  +FP  +   +DLL +M  +DP  
Sbjct: 239 IG--TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296

Query: 282 RITAQQALEHRYFSS 296
           RITA++ALEH Y  +
Sbjct: 297 RITAKEALEHPYLQT 311

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  301 bits (772), Expect = e-101
 Identities = 100/310 (32%), Positives = 153/310 (49%), Gaps = 30/310 (9%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           +  RY+  + LG G  G+V+ A+D    + VAIKKI L   +      ALREIK+++ L 
Sbjct: 9   LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK--HALREIKIIRRLD 66

Query: 70  SPHIIELIDAFPHKGN--------------LHLVFEFMETDLETVIRNTNIFLSPADIKS 115
             +I+++ +     G+              +++V E+METDL  V+      L     + 
Sbjct: 67  HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP--LLEEHARL 124

Query: 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRR---FTHQ 171
           +M   L+GL + H   VLHRD+KP NL I +    LK+ DFGLARI           +  
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184

Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231
           +  +WYR+P LL     Y   +D+WAAGCIFAE+L  +    G+ +++Q+  I  +    
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP-- 242

Query: 232 TPSQWPDLAYLP----DYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
              +  D   L      Y+         PL  L P  S +A+D L ++ T+ P  R+TA+
Sbjct: 243 VVHE-EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301

Query: 287 QALEHRYFSS 296
           +AL H Y S 
Sbjct: 302 EALSHPYMSI 311

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  299 bits (768), Expect = 1e-99
 Identities = 112/308 (36%), Positives = 154/308 (50%), Gaps = 34/308 (11%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-------ALREI 62
           V  RY     +GEG YG+V  A D      VAIKKI          F         LREI
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS--------PFEHQTYCQRTLREI 76

Query: 63  KLLKELKSPHIIELIDAFPHKGN-----LHLVFEFMETDLETVIRNTNIFLSPADIKSYM 117
           K+L   +  +II + D            +++V + METDL  +++  +  LS   I  ++
Sbjct: 77  KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFL 134

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---THQVFA 174
              L+GL + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+           T  V  
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194

Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           RWYRAPE++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G  +PS
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG--SPS 252

Query: 235 QWPDLAYLPDYVEYQYVAA------PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
           Q  DL  + +     Y+ +       P   LFP+A   ALDLL KM T++P  RI  +QA
Sbjct: 253 Q-EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311

Query: 289 LEHRYFSS 296
           L H Y   
Sbjct: 312 LAHPYLEQ 319

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  296 bits (759), Expect = 3e-98
 Identities = 106/299 (35%), Positives = 146/299 (48%), Gaps = 21/299 (7%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           +   Y+    +G G YG V  AID ++G+ VAIKK+    Q E     A RE+ LLK ++
Sbjct: 22  LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ 81

Query: 70  SPHIIELIDAFPHKGNLH------LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
             ++I L+D F    +L       LV  FM+TDL+ ++       S   I+  +   LKG
Sbjct: 82  HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK---FSEEKIQYLVYQMLKG 138

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           L + H   V+HRD+KP NL +    +LK+ DFGLAR     D   T  V  RWYRAPE++
Sbjct: 139 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRAPEVI 195

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                Y   VD+W+ GCI AE+L  +   +G   +DQL +I    G         +  L 
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE---FVQKLN 252

Query: 244 -----DYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                 Y++            LFP AS  A DLL KM   D   R+TA QAL H +F  
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 311

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  294 bits (754), Expect = 2e-97
 Identities = 106/299 (35%), Positives = 154/299 (51%), Gaps = 20/299 (6%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V   Y   + +G G YG V  A+D +TG  VAIKK+    Q E     A RE++LLK ++
Sbjct: 23  VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR 82

Query: 70  SPHIIELIDAFPHKGNLH------LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
             ++I L+D F     L       LV  FM TDL  ++++    L    I+  +   LKG
Sbjct: 83  HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQMLKG 140

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           L + H   ++HRD+KP NL +    +LK+ DFGLAR     D   T  V  RWYRAPE++
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA---DSEMTGYVVTRWYRAPEVI 197

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
               +Y   VD+W+ GCI AE++  +   +GS  +DQL +I    G  TP     +  L 
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG--TPPA-EFVQRLQ 254

Query: 244 -----DYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                +Y++    +      S+  +AS  A++LL KM   D + R+TA +AL H YF S
Sbjct: 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  292 bits (749), Expect = 1e-96
 Identities = 106/299 (35%), Positives = 148/299 (49%), Gaps = 20/299 (6%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +K
Sbjct: 27  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86

Query: 70  SPHIIELIDAFPHKGNLH------LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
             ++I L+D F    +L       LV   M  DL  +++     L+   ++  +   L+G
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRG 144

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           L + H   ++HRD+KP+NL +    +LK+ DFGLAR         T  V  RWYRAPE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIM 201

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
                Y   VD+W+ GCI AELL  R    G+  IDQL  I    G  TP     L  + 
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG--TPGA-ELLKKIS 258

Query: 244 -----DYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                +Y++    +      ++F  A+  A+DLL KM   D   RITA QAL H YF+ 
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  288 bits (740), Expect = 2e-94
 Identities = 115/348 (33%), Positives = 163/348 (46%), Gaps = 65/348 (18%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V D Y+ + ++G G+YG VY A D  T + VAIKK+    +        LREI +L  LK
Sbjct: 24  VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83

Query: 70  SPHIIELIDAFPHKGN-----LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           S +II L D            L++V E  ++DL+ + + T IFL+   IK+ +   L G 
Sbjct: 84  SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEEHIKTILYNLLLGE 142

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP-------------------- 164
            F H+  ++HRD+KP N L+     +K+ DFGLAR   S                     
Sbjct: 143 NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202

Query: 165 --DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-----------RRPF 211
              ++ T  V  RWYRAPEL+   + Y   +D+W+ GCIFAELLN           R P 
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL 262

Query: 212 LQGSSD-----------------IDQLGKIFAAFGTATPSQWPDLAYLP-----DYVE-Y 248
             GSS                   DQL  IF   G  TP++  DL  +       Y++ +
Sbjct: 263 FPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIG--TPTE-DDLKNINKPEVIKYIKLF 319

Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
            +     L+  +PS SDD ++LL  M  ++P  RIT  QAL+H Y   
Sbjct: 320 PHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  280 bits (719), Expect = 6e-92
 Identities = 109/353 (30%), Positives = 170/353 (48%), Gaps = 65/353 (18%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR-------LGKQKEGVNFTALREI 62
           V  +Y   + LG+G YG+V+K+ID +TG+ VA+KKI          ++         REI
Sbjct: 7   VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQR-------TFREI 59

Query: 63  KLLKELKS-PHIIELIDAFPHKGN--LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM 119
            +L EL    +I+ L++      +  ++LVF++METDL  VIR  NI L P   +  +  
Sbjct: 60  MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIR-ANI-LEPVHKQYVVYQ 117

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----- 174
            +K + + H   +LHRDMKP+N+L+ +   +K+ADFGL+R F +  R   +   +     
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177

Query: 175 ----------------RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
                           RWYRAPE+L G+ +Y  G+D+W+ GCI  E+L  +P   GSS +
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237

Query: 219 DQLGKIFAAFGTATPSQWPDLAYLP-----DYVE---------------YQYVAAPPLRS 258
           +QL +I        PS   D+  +        +E                       L  
Sbjct: 238 NQLERIIGVID--FPSN-EDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294

Query: 259 LFPSA--SDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
           + P A  +++ALDLL K+  ++P  RI+A  AL+H + S    P E       
Sbjct: 295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHI 347

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  279 bits (715), Expect = 2e-90
 Identities = 102/321 (31%), Positives = 144/321 (44%), Gaps = 31/321 (9%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L+K + 
Sbjct: 60  VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119

Query: 70  SPHIIELIDAFPHKGNLH------LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
             +II L++ F  +  L       LV E M+ +L  VI+     L    +   +   L G
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCG 176

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           +   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G      T  V  R+YRAPE++
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVI 235

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL- 242
            G   Y   VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     +  L 
Sbjct: 236 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE---FMKKLQ 291

Query: 243 PDYVEY----QYVAAPPLRSLFPSA------------SDDALDLLSKMFTYDPKARITAQ 286
           P    Y       A      LFP +            +  A DLLSKM   DP  RI+  
Sbjct: 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 351

Query: 287 QALEHRYFSSAPLPTEPNKLP 307
            AL+H Y +    P E    P
Sbjct: 352 DALQHPYINVWYDPAEVEAPP 372

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  273 bits (701), Expect = 2e-89
 Identities = 97/310 (31%), Positives = 141/310 (45%), Gaps = 31/310 (10%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L+K + 
Sbjct: 23  VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82

Query: 70  SPHIIELIDAFPHKGNLH------LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
             +II L++ F  + +L       +V E M+ +L  VI+     L    +   +   L G
Sbjct: 83  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCG 139

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           +   H   ++HRD+KP+N+++ S   LK+ DFGLAR         T  V  R+YRAPE++
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVI 198

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
            G   Y   VD+W+ GCI  E++       G+  IDQ  K+    G  TP     +  L 
Sbjct: 199 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG--TPCP-EFMKKLQ 254

Query: 244 D----YVE-YQYVAAPPLRSLFPSA------------SDDALDLLSKMFTYDPKARITAQ 286
                YVE     A      LFP              +  A DLLSKM   D   RI+  
Sbjct: 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 314

Query: 287 QALEHRYFSS 296
           +AL+H Y + 
Sbjct: 315 EALQHPYINV 324

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  219 bits (561), Expect = 3e-69
 Identities = 76/326 (23%), Positives = 120/326 (36%), Gaps = 68/326 (20%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--S 70
            Y   + +G G    V++ ++ +  Q  AIK + L +       +   EI  L +L+  S
Sbjct: 29  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
             II L D       +++V E    DL + ++       P + KSY +  L+ +   H+ 
Sbjct: 88  DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI-DPWERKSYWKNMLEAVHTIHQH 146

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIF-------------GSPDRRFTHQVFARWY 177
            ++H D+KP N LI   G LKL DFG+A                G+             Y
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV-----------NY 194

Query: 178 RAPELLFGA----------KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA 226
             PE +              +     DVW+ GCI   +   + PF Q  + I +L  I  
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-- 252

Query: 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
                 P+   +    PD                     D  D+L      DPK RI+  
Sbjct: 253 ----IDPNHEIEF---PDIP-----------------EKDLQDVLKCCLKRDPKQRISIP 288

Query: 287 QALEHRYFSSAPLPTEPNKLPRPATK 312
           + L H Y      P   N++ +  T+
Sbjct: 289 ELLAHPYVQIQTHPV--NQMAKGTTE 312

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  218 bits (558), Expect = 7e-69
 Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 57/319 (17%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           S + A  + +  VLG+G +G V KA +    +  AIKKIR  ++K     T L E+ LL 
Sbjct: 1   SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLA 57

Query: 67  ELKSPHIIELIDAFPHKGN-------------LHLVFEFMET-DLETVIRNTNIFLSPAD 112
            L   +++    A+  + N             L +  E+ E   L  +I + N+     +
Sbjct: 58  SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117

Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172
                +  L+ L++ H + ++HRD+KP N+ I     +K+ DFGLA+             
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177

Query: 173 FARW--------------YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218
                             Y A E+L G   Y   +D+++ G IF E++   PF  G   +
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERV 235

Query: 219 DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYD 278
           + L K+ +      P    +                               ++  +  +D
Sbjct: 236 NILKKLRSVSIEFPPDFDDNK------------------------MKVEKKIIRLLIDHD 271

Query: 279 PKARITAQQALEHRYFSSA 297
           P  R  A+  L   +    
Sbjct: 272 PNKRPGARTLLNSGWLPVK 290

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  214 bits (547), Expect = 9e-67
 Identities = 81/379 (21%), Positives = 131/379 (34%), Gaps = 73/379 (19%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--S 70
            Y   + +G G    V++ ++ +  Q  AIK + L +       +   EI  L +L+  S
Sbjct: 10  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
             II L D       +++V E    DL + ++       P + KSY +  L+ +   H+ 
Sbjct: 69  DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI-DPWERKSYWKNMLEAVHTIHQH 127

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIF-------------GSPDRRFTHQVFARWY 177
            ++H D+KP N LI   G LKL DFG+A                G+ +           Y
Sbjct: 128 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-----------Y 175

Query: 178 RAPELLFG----------AKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFA 226
             PE +              +     DVW+ GCI   +   + PF Q  + I +L  I  
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-- 233

Query: 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
                 P+   +    PD                     D  D+L      DPK RI+  
Sbjct: 234 ----IDPNHEIEF---PDIP-----------------EKDLQDVLKCCLKRDPKQRISIP 269

Query: 287 QALEHRYF--SSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREG 344
           + L H Y    + P+                +    N        S  +  + +     G
Sbjct: 270 ELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPN-----SILKAAKTLYEHYSG 324

Query: 345 FEGNANRTDKIEEHAGETK 363
            E + + + K  E     K
Sbjct: 325 GESHNSSSSKTFEKKRGKK 343

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  209 bits (535), Expect = 6e-65
 Identities = 80/359 (22%), Positives = 146/359 (40%), Gaps = 51/359 (14%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           +   +L  +  ++Y++ + +GEG++G       T+ G+   IK+I + +        + R
Sbjct: 13  LGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR 72

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVI-RNTNIFLSPADIKSYMQ 118
           E+ +L  +K P+I++  ++F   G+L++V ++ E  DL   I     +      I  +  
Sbjct: 73  EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR--- 175
                L   H + +LHRD+K  N+ +   G ++L DFG+AR+  S          AR   
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS------TVELARACI 186

Query: 176 ---WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231
              +Y +PE+    K Y    D+WA GC+  EL   +  F +  S  + + KI       
Sbjct: 187 GTPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAF-EAGSMKNLVLKI------- 237

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                         +   +   PP+   +   S D   L+S++F  +P+ R +    LE 
Sbjct: 238 --------------ISGSF---PPVSLHY---SYDLRSLVSQLFKRNPRDRPSVNSILEK 277

Query: 292 RY-------FSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDRE 343
            +       F S  L  E   L   +   +       P  G   +S     +   P  +
Sbjct: 278 GFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQKITKPAAK 336

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  208 bits (532), Expect = 4e-64
 Identities = 75/340 (22%), Positives = 119/340 (35%), Gaps = 68/340 (20%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--S 70
            Y   + +G G    V++ ++ +  Q  AIK + L +       +   EI  L +L+  S
Sbjct: 57  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
             II L D       +++V E    DL + ++       P + KSY +  L+ +   H+ 
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI-DPWERKSYWKNMLEAVHTIHQH 174

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIF-------------GSPDRRFTHQVFARWY 177
            ++H D+KP N LI   G LKL DFG+A                G+ +           Y
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN-----------Y 222

Query: 178 RAPELLFGA----------KQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFA 226
             PE +              +     DVW+ GCI   +   + PF Q  + I +L  I  
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-- 280

Query: 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
                 P+   +    PD                     D  D+L      DPK RI+  
Sbjct: 281 ----IDPNHEIE---FPDIP-----------------EKDLQDVLKCCLKRDPKQRISIP 316

Query: 287 QALEHRYF--SSAPLPTEPNKLPRPATKRASKASDFNPQE 324
           + L H Y    + P+                +    N   
Sbjct: 317 ELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPN 356

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  206 bits (527), Expect = 5e-64
 Identities = 72/315 (22%), Positives = 136/315 (43%), Gaps = 36/315 (11%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTALREIKLLK 66
           K++ ++Y+  E LG G +G+V++ ++T + +T   K +++ G  +  V     +EI +L 
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV----KKEISILN 56

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
             +  +I+ L ++F     L ++FEF+   D+   I  +   L+  +I SY+    + L 
Sbjct: 57  IARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116

Query: 126 FCHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
           F H   + H D++P N++  +     +K+ +FG AR    P   F     A  Y APE+ 
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-KPGDNFRLLFTAPEYYAPEVH 175

Query: 184 FGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
                     D+W+ G +   LL+   PFL   ++   +  I  A               
Sbjct: 176 QH-DVVSTATDMWSLGTLVYVLLSGINPFL-AETNQQIIENIMNA--------------- 218

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE 302
               EY +         F   S +A+D + ++   + K+R+TA +AL+H +         
Sbjct: 219 ----EYTFDEEA-----FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVS 269

Query: 303 PNKLPRPATKRASKA 317
              +     +R    
Sbjct: 270 TKVIRTLKHRRYYHT 284

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  210 bits (537), Expect = 6e-63
 Identities = 78/311 (25%), Positives = 133/311 (42%), Gaps = 33/311 (10%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
              V D Y   E LG G +GVV++  +  TG   A K +    + +       +EI+ + 
Sbjct: 152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV--RKEIQTMS 209

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
            L+ P ++ L DAF     + +++EFM   +L   + + +  +S  +   YM+   KGL 
Sbjct: 210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 269

Query: 126 FCHKKWVLHRDMKPNNLLIGSHG--QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL 183
             H+   +H D+KP N++  +    +LKL DFGL      P +          + APE+ 
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVA 328

Query: 184 FGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
            G K  G   D+W+ G +   LL+   PF  G +D + L  + +                
Sbjct: 329 EG-KPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSC--------------- 371

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE 302
               ++    +      F   S+D  D + K+   DP  R+T  QALEH + +    P  
Sbjct: 372 ----DWNMDDSA-----FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGR 422

Query: 303 PNKLPRPATKR 313
            +++P     +
Sbjct: 423 DSQIPSSRYTK 433

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  202 bits (516), Expect = 2e-62
 Identities = 70/284 (24%), Positives = 107/284 (37%), Gaps = 33/284 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KS 70
             + +   LG G+YG V+K    + G+  A+K+     +        L E+   +++ + 
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           P  + L  A+   G L+L  E     L+         L  A +  Y++ TL  LA  H +
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            ++H D+KP N+ +G  G+ KL DFGL    G+       Q     Y APELL     YG
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV-QEGDPRYMAPELL--QGSYG 233

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
              DV++ G    E+        G     QL + +                         
Sbjct: 234 TAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY------------------------- 268

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
              PP        S +   +L  M   DPK R TA+  L     
Sbjct: 269 --LPP--EFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  201 bits (514), Expect = 3e-62
 Identities = 63/311 (20%), Positives = 113/311 (36%), Gaps = 47/311 (15%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
             +L  ++LG+G    V++    KTG   AIK    I   +  +      +RE ++LK+L
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ----MREFEVLKKL 64

Query: 69  KSPHIIELIDAF--PHKGNLHLVFEFMET-DLETVI--RNTNIFLSPADIKSYMQMTLKG 123
              +I++L          +  L+ EF     L TV+   +    L  ++    ++  + G
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 124 LAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLARIF----------GSPDRRFT 169
           +    +  ++HR++KP N++           KL DFG AR            G+ +    
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE---- 180

Query: 170 HQVFARWYRAPELLFGA-------KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQL 221
                  Y  P++   A       K+YGA VD+W+ G  F        PF +      + 
Sbjct: 181 -------YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF-RPFEGPRRN 232

Query: 222 GKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR-SLFPSASDDALDLLSKMFTYDPK 280
            ++     T  PS         +     +    P+  SL          +L+ +   D +
Sbjct: 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQE 292

Query: 281 ARITAQQALEH 291
                 Q    
Sbjct: 293 KCWGFDQFFAE 303

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  202 bits (517), Expect = 4e-62
 Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 38/296 (12%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTAL-REIK 63
                D Y   EV+G+G + VV + I+ +TGQ  A+K +         G++   L RE  
Sbjct: 19  DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78

Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL-ETVIR--NTNIFLSPADIKSYMQM 119
           +   LK PHI+EL++ +   G L++VFEFM+  DL   +++  +     S A    YM+ 
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARW 176
            L+ L +CH   ++HRD+KP+ +L+ S      +KL  FG+A   G        +V    
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           + APE++   + YG  VDVW  G I   LL    PF      +     I           
Sbjct: 199 FMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPFYGTKERL--FEGIIKG-------- 247

Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                      +Y+          +   S+ A DL+ +M   DP  RIT  +AL H
Sbjct: 248 -----------KYKMNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALNH 287

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  199 bits (509), Expect = 8e-62
 Identities = 67/312 (21%), Positives = 114/312 (36%), Gaps = 60/312 (19%)

Query: 2   AEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALRE 61
               + K+    + + E++G G +G V+KA     G+T  IK+++   +K      A RE
Sbjct: 1   GAHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK------AERE 54

Query: 62  IKLLKELKSPHIIELIDAF----------------PHKGNLHLVFEFMET-DLETVI-RN 103
           +K L +L   +I+     +                     L +  EF +   LE  I + 
Sbjct: 55  VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 114

Query: 104 TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163
               L         +   KG+ + H K +++RD+KP+N+ +    Q+K+ DFGL     +
Sbjct: 115 RGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 174

Query: 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLG 222
             +R T       Y +PE +   + YG  VD++A G I AELL+      + S     L 
Sbjct: 175 DGKR-TRSKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR 232

Query: 223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282
                              + D                         LL K+ +  P+ R
Sbjct: 233 DG----------------IISDIF-----------------DKKEKTLLQKLLSKKPEDR 259

Query: 283 ITAQQALEHRYF 294
               + L     
Sbjct: 260 PNTSEILRTLTV 271

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  199 bits (508), Expect = 9e-62
 Identities = 75/301 (24%), Positives = 122/301 (40%), Gaps = 53/301 (17%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + Y     +G G+YG   K      G+ +  K++  G   E      + E+ LL+ELK P
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 72  HIIELIDAFPHKGN--LHLVFEFMET-DLETVI---RNTNIFLSPADIKSYMQMTLKGLA 125
           +I+   D    + N  L++V E+ E  DL +VI        +L    +   M      L 
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125

Query: 126 FCHKK-----WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR----- 175
            CH++      VLHRD+KP N+ +     +KL DFGLARI            FA+     
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH------DTSFAKTFVGT 179

Query: 176 -WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATP 233
            +Y +PE +     Y    D+W+ GC+  EL     PF    S  +  GKI         
Sbjct: 180 PYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPF-TAFSQKELAGKI--------- 228

Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                        E ++     +   +   SD+  +++++M       R + ++ LE+  
Sbjct: 229 ------------REGKF---RRIPYRY---SDELNEIITRMLNLKDYHRPSVEEILENPL 270

Query: 294 F 294
            
Sbjct: 271 I 271

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  203 bits (519), Expect = 1e-61
 Identities = 68/325 (20%), Positives = 130/325 (40%), Gaps = 62/325 (19%)

Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           +  + + +  +  ++LG G+ G V     +  G+ VA+K++ +          AL EIKL
Sbjct: 8   NFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCD-----IALMEIKL 61

Query: 65  LKELKS-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF------LSPADIKSYM 117
           L E    P++I    +      L++  E    +L+ ++ + N+           +  S +
Sbjct: 62  LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGS-------------HGQLKLADFGLARIFGSP 164
           +    G+A  H   ++HRD+KP N+L+ +             + ++ ++DFGL +   S 
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181

Query: 165 DRRFTHQVFAR----WYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN--RRPFL 212
              F   +        +RAPELL  +      ++    +D+++ GC+F  +L+  + PF 
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF- 240

Query: 213 QGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLS 272
                  +   I     +    +                          S   +A DL+S
Sbjct: 241 --GDKYSRESNIIRGIFSLDEMKCLHD---------------------RSLIAEATDLIS 277

Query: 273 KMFTYDPKARITAQQALEHRYFSSA 297
           +M  +DP  R TA + L H  F   
Sbjct: 278 QMIDHDPLKRPTAMKVLRHPLFWPK 302

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  203 bits (519), Expect = 1e-61
 Identities = 68/298 (22%), Positives = 118/298 (39%), Gaps = 45/298 (15%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-P 71
            +  ++VLG G  G +         + VA+K+I      E  +F A RE++LL+E    P
Sbjct: 25  SFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRI----LPECFSF-ADREVQLLRESDEHP 78

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           ++I        +   ++  E     L+  +   +      +  + +Q T  GLA  H   
Sbjct: 79  NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN 138

Query: 132 VLHRDMKPNNLLIGSHGQ-----LKLADFGLARIFGSPDRRFTHQVFA---RWYRAPELL 183
           ++HRD+KP+N+LI            ++DFGL +        F+ +        + APE+L
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML 198

Query: 184 FGA--KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
                +     VD+++AGC+F  +++    PF  G S   Q   +  A            
Sbjct: 199 SEDCKENPTYTVDIFSAGCVFYYVISEGSHPF--GKSLQRQANILLGACSLDCLHPEKHE 256

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
                                      A +L+ KM   DP+ R +A+  L+H +F S 
Sbjct: 257 ------------------------DVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  204 bits (522), Expect = 2e-61
 Identities = 92/307 (29%), Positives = 147/307 (47%), Gaps = 35/307 (11%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLL 65
           +   +DRY  + VLG+G++G V    D  TGQ  A+K I   + K+  +  +L RE++LL
Sbjct: 21  TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 80

Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           K+L  P+I++L + F  KG  +LV E     +L   I +   F S  D    ++  L G+
Sbjct: 81  KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF-SEVDAARIIRQVLSGI 139

Query: 125 AFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            + HK  ++HRD+KP NLL+ S      +++ DFGL+  F    ++   ++   +Y APE
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPE 198

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           +L     Y    DVW+ G I   LL    PF  G+++ D L K+                
Sbjct: 199 VL--HGTYDEKCDVWSTGVILYILLSGCPPF-NGANEYDILKKVEKG------------- 242

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                 +Y +         +   S+ A DL+ KM TY P  RI+A+ AL+H +  +    
Sbjct: 243 ------KYTFELPQ-----WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 291

Query: 301 TEPNKLP 307
                +P
Sbjct: 292 QISVDVP 298

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  203 bits (519), Expect = 5e-61
 Identities = 90/302 (29%), Positives = 138/302 (45%), Gaps = 32/302 (10%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
              +++ Y + + LG G YG V    D  T    AIK IR        N   L E+ +LK
Sbjct: 32  KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLK 91

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
            L  P+I++L D F  K N +LV E  +  +L   I +   F +  D    ++  L G+ 
Sbjct: 92  LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF-NEVDAAVIIKQVLSGVT 150

Query: 126 FCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           + HK  ++HRD+KP NLL+ S      +K+ DFGL+ +F    ++   ++   +Y APE+
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERLGTAYYIAPEV 209

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           L   K+Y    DVW+ G I   LL   P   G +D + L K+     T    +W ++   
Sbjct: 210 L--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV--- 264

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE 302
                                S+ A DL+ +M  +D + RI+AQQALEH +        E
Sbjct: 265 ---------------------SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKE 303

Query: 303 PN 304
             
Sbjct: 304 SG 305

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  201 bits (512), Expect = 5e-61
 Identities = 81/324 (25%), Positives = 136/324 (41%), Gaps = 43/324 (13%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKL 64
              V D Y   E LG G +GVV++ ++  TG+    K I       K  V      EI +
Sbjct: 46  QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV----KNEISI 101

Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           + +L  P +I L DAF  K  + L+ EF+   +L   I   +  +S A++ +YM+   +G
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG--QLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
           L   H+  ++H D+KP N++  +     +K+ DFGLA     PD           + APE
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKVTTATAEFAAPE 220

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ++   +  G   D+WA G +   LL+   PF  G  D++ L  +                
Sbjct: 221 IVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFA-GEDDLETLQNVKRC------------- 265

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS----- 295
                 ++++         F S S +A D +  +   +P+ R+T   ALEH +       
Sbjct: 266 ------DWEFDEDA-----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN 314

Query: 296 -SAPLPTEPNKLPRPATKRASKAS 318
            ++ +P+      R   K      
Sbjct: 315 LTSRIPSSRYNKIRQKIKEKYADW 338

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  197 bits (504), Expect = 6e-61
 Identities = 88/294 (29%), Positives = 135/294 (45%), Gaps = 42/294 (14%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREI 62
               A+RY    +LG+G++G V K  D  T Q  A+K I       K    +    LRE+
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI----LREV 72

Query: 63  KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL 121
           +LLK+L  P+I++L +      + ++V E     +L   I     F S  D    ++   
Sbjct: 73  ELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF-SEHDAARIIKQVF 131

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARWYR 178
            G+ + HK  ++HRD+KP N+L+ S      +K+ DFGL+  F   + +   ++   +Y 
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYI 190

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE+L     Y    DVW+AG I   LL    PF  G ++ D L ++             
Sbjct: 191 APEVL--RGTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDILKRVETG---------- 237

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                    +Y +         + + SDDA DL+ KM T+ P  RITA Q LEH
Sbjct: 238 ---------KYAFDLPQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  198 bits (506), Expect = 6e-61
 Identities = 87/322 (27%), Positives = 139/322 (43%), Gaps = 42/322 (13%)

Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTAL- 59
             K + D Y+  + LG G  G V  A + KT + VAIK     K  +G  +E      + 
Sbjct: 4   YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63

Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYM 117
            EI++LK+L  P II++ + F  + + ++V E ME  +L + V+ N    L  A  K Y 
Sbjct: 64  TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK--RLKEATCKLYF 120

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFA 174
              L  + + H+  ++HRD+KP N+L+ S      +K+ DFG ++I G            
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGT 179

Query: 175 RWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTA 231
             Y APE+L       Y   VD W+ G I    L+   PF +  + +    +I +     
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
            P  W ++                        S+ ALDL+ K+   DPKAR T ++AL H
Sbjct: 240 IPEVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRH 275

Query: 292 RYFSSAPLPTEPNKLPRPATKR 313
            +     +  +   L     + 
Sbjct: 276 PWLQDEDMKRKFQDLLSEENES 297

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  197 bits (504), Expect = 8e-61
 Identities = 74/315 (23%), Positives = 124/315 (39%), Gaps = 54/315 (17%)

Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG---KQKEGVNFTALRE 61
           D+       +   + +G G +  VY+A     G  VA+KK+++      K   +   ++E
Sbjct: 25  DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD--CIKE 82

Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYM 117
           I LLK+L  P++I+   +F     L++V E  +  DL  +I++       +    +  Y 
Sbjct: 83  IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR-- 175
                 L   H + V+HRD+KP N+ I + G +KL D GL R F S          A   
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS------KTTAAHSL 196

Query: 176 ----WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQL-GKIFAAFG 229
               +Y +PE +     Y    D+W+ GC+  E+   + PF     ++  L  KI     
Sbjct: 197 VGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI----- 250

Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSA--SDDALDLLSKMFTYDPKARITAQQ 287
                            +  Y   PPL    PS   S++   L++     DP+ R     
Sbjct: 251 ----------------EQCDY---PPL----PSDHYSEELRQLVNMCINPDPEKRPDVTY 287

Query: 288 ALEHRYFSSAPLPTE 302
             +      A   + 
Sbjct: 288 VYDVAKRMHACTASS 302

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  201 bits (512), Expect = 1e-60
 Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 55/346 (15%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           VA RY   +V+G+G++G V KA D K  Q VA+K +R    ++  +  A  EI++L+ L+
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLR 151

Query: 70  ------SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQMTLK 122
                 + ++I +++ F  + ++ + FE +  +L  +I+       S   ++ +    L+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHG--QLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
            L   HK  ++H D+KP N+L+   G   +K+ DFG +       +R    + +R+YRAP
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTYIQSRFYRAP 268

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFG----------- 229
           E++ GA+ YG  +D+W+ GCI AELL   P L G  + DQL  +    G           
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327

Query: 230 ----------------TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP---SASDDAL-D 269
                             T S    +         +    P  R          D    D
Sbjct: 328 RAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLD 387

Query: 270 LLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPATKRAS 315
            L +   +DP  R+T  QAL H +           +LP+P T   +
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLRR--------RLPKPPTGEKT 425

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  196 bits (501), Expect = 1e-60
 Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 43/295 (14%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREI 62
           S K +D Y  +E LG+G + VV + +   TG   A K I       +  + +     RE 
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL----EREA 56

Query: 63  KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMT 120
           ++ ++L+ P+I+ L D+   +   +LVF+ +   +L E ++     F S AD    +Q  
Sbjct: 57  RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQI 114

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARWY 177
           L+ +A+CH   ++HR++KP NLL+ S      +KLADFGLA         +        Y
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGY 173

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
            +PE+L     Y   VD+WA G I   LL    PF           +I A          
Sbjct: 174 LSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFW-DEDQHRLYAQIKAG--------- 222

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                      Y Y +       + + + +A  L+  M T +PK RITA QAL+ 
Sbjct: 223 ----------AYDYPSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  196 bits (501), Expect = 2e-60
 Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 44/301 (14%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-------EGVNFTAL 59
           +    + Y  +E+LG G   VV + I   T +  A+K I +           + +    L
Sbjct: 12  THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71

Query: 60  REIKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSY 116
           +E+ +L+++   P+II+L D +       LVF+ M+  +L + +       LS  + +  
Sbjct: 72  KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKI 129

Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
           M+  L+ +   HK  ++HRD+KP N+L+     +KL DFG +     P  +         
Sbjct: 130 MRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-PGEKLREVCGTPS 188

Query: 177 YRAPELLFGA-----KQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGT 230
           Y APE++  +       YG  VD+W+ G I   LL    PF      +  L  I +    
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW-HRKQMLMLRMIMSG--- 244

Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                            YQ+ +       +   SD   DL+S+     P+ R TA++AL 
Sbjct: 245 ----------------NYQFGSPE-----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283

Query: 291 H 291
           H
Sbjct: 284 H 284

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  202 bits (515), Expect = 2e-60
 Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 34/295 (11%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
               A+RY    +LG+G++G V K  D  T Q  A+K I     K     T LRE++LLK
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           +L  P+I++L +      + ++V E     +L   I     F S  D    ++    G+ 
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF-SEHDAARIIKQVFSGIT 135

Query: 126 FCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           + HK  ++HRD+KP N+L+ S      +K+ DFGL+  F   + +   ++   +Y APE+
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEV 194

Query: 183 LFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           L     Y    DVW+AG I   LL    PF  G ++ D L ++                 
Sbjct: 195 L--RGTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDILKRVETG-------------- 237

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                +Y +         + + SDDA DL+ KM T+ P  RITA Q LEH +   
Sbjct: 238 -----KYAFDLPQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  196 bits (499), Expect = 4e-60
 Identities = 68/324 (20%), Positives = 116/324 (35%), Gaps = 58/324 (17%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
             +   + LG G +GVV++A +       AIK+IRL  ++       +RE+K L +L+ P
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE-KVMREVKALAKLEHP 63

Query: 72  HIIELIDAF------------PHKGNLHLVFEFMET-DLETVI--RNTNIFLSPADIKSY 116
            I+   +A+              K  L++  +     +L+  +  R T      +     
Sbjct: 64  GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123

Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR- 175
                + + F H K ++HRD+KP+N+       +K+ DFGL       +   T       
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183

Query: 176 -----------WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
                       Y +PE + G   Y   VD+++ G I  ELL   PF      +  L  +
Sbjct: 184 YARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELL--YPFSTQMERVRTLTDV 240

Query: 225 FAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT 284
                                   ++   PP   LF         ++  M +  P  R  
Sbjct: 241 ---------------------RNLKF---PP---LFTQKYPCEYVMVQDMLSPSPMERPE 273

Query: 285 AQQALEHRYFSSAPLPTEPNKLPR 308
           A   +E+  F     P +     R
Sbjct: 274 AINIIENAVFEDLDFPGKTVLRQR 297

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  196 bits (500), Expect = 5e-60
 Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 40/321 (12%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           +KV D Y   E LG G + +V K  +  TG   A   IKK +    + GV+   + RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMTL 121
           +L+++   ++I L D + ++ ++ L+ E +   +L + + +     LS  +  S+++  L
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLARIFGSPDRRFTHQVFARWY 177
            G+ + H K + H D+KP N+++         +KL DFGLA         F +      +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEF 184

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
            APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I +          
Sbjct: 185 VAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV--------- 233

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                      Y +         F   S+ A D + K+   + + R+T Q+AL H + + 
Sbjct: 234 ----------SYDFDEEF-----FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278

Query: 297 APLPTEPNKLPRPATKRASKA 317
                   +          + 
Sbjct: 279 VDNQQAMVRRESVVNLENFRK 299

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  199 bits (507), Expect = 5e-60
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 42/315 (13%)

Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTAL- 59
             K + D Y+  + LG G  G V  A + KT + VAI+     K  +G  +E      + 
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188

Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYM 117
            EI++LK+L  P II++ + F  + + ++V E ME  +L + V+ N    L  A  K Y 
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK--RLKEATCKLYF 245

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFA 174
              L  + + H+  ++HRD+KP N+L+ S  +   +K+ DFG ++I G            
Sbjct: 246 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGT 304

Query: 175 RWYRAPELLFGA--KQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231
             Y APE+L       Y   VD W+ G I F  L    PF +  + +    +I +     
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 364

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
            P  W ++                        S+ ALDL+ K+   DPKAR T ++AL H
Sbjct: 365 IPEVWAEV------------------------SEKALDLVKKLLVVDPKARFTTEEALRH 400

Query: 292 RYFSSAPLPTEPNKL 306
            +     +  +   L
Sbjct: 401 PWLQDEDMKRKFQDL 415

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  196 bits (500), Expect = 6e-60
 Identities = 71/322 (22%), Positives = 127/322 (39%), Gaps = 35/322 (10%)

Query: 8   KKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +   + Y L  + LG G + VV + I   TGQ  A K ++  ++ +      L EI +L+
Sbjct: 24  ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLE 83

Query: 67  ELKS-PHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMTLKG 123
             KS P +I L + + +   + L+ E+    ++    +      +S  D+   ++  L+G
Sbjct: 84  LAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG 143

Query: 124 LAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
           + + H+  ++H D+KP N+L+ S    G +K+ DFG++R  G         +    Y AP
Sbjct: 144 VYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACELREIMGTPEYLAP 202

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           E+L          D+W  G I   LL    PF+ G  + +    I               
Sbjct: 203 EILNY-DPITTATDMWNIGIIAYMLLTHTSPFV-GEDNQETYLNISQV------------ 248

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
                     Y         F S S  A D +  +   +P+ R TA+  L H +      
Sbjct: 249 -------NVDYSEET-----FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF 296

Query: 300 PTEPNKLPRPATKRASKASDFN 321
               +     ++ +    S  +
Sbjct: 297 ENLFHPEETSSSSQTQDHSVRS 318

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  195 bits (498), Expect = 1e-59
 Identities = 70/340 (20%), Positives = 129/340 (37%), Gaps = 76/340 (22%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI---RLGKQKEGVNFTALREIK 63
             ++  +Y  +  +G+G+YGVV  AI+ +T    AIK +   ++ +           E++
Sbjct: 21  LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80

Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFME----------------------------- 94
           L+K+L  P+I  L + +  +  + LV E                                
Sbjct: 81  LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140

Query: 95  -----------TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143
                        +     + +       I + M+     L + H + + HRD+KP N L
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFL 200

Query: 144 IGSHG--QLKLADFGLARIFGSPDRRFTHQVFAR----WYRAPELLFGA-KQYGAGVDVW 196
             ++   ++KL DFGL++ F   +    + +  +    ++ APE+L    + YG   D W
Sbjct: 201 FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260

Query: 197 AAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255
           +AG +   LL    PF  G +D D + ++                      +  +     
Sbjct: 261 SAGVLLHLLLMGAVPF-PGVNDADTISQVLNK-------------------KLCFENPN- 299

Query: 256 LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
               +   S  A DLLS +   +   R  A +AL+H + S
Sbjct: 300 ----YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  199 bits (509), Expect = 2e-59
 Identities = 92/317 (29%), Positives = 136/317 (42%), Gaps = 45/317 (14%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA-------- 58
             K+ + Y K   LG G YG V    +       AIK I+  +  +G             
Sbjct: 31  EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH 90

Query: 59  ---LREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIK 114
                EI LLK L  P+II+L D F  K   +LV EF E  +L   I N + F    D  
Sbjct: 91  EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAA 149

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQ 171
           + M+  L G+ + HK  ++HRD+KP N+L+ +      +K+ DFGL+  F S D +   +
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-SKDYKLRDR 208

Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGT 230
           +   +Y APE+L   K+Y    DVW+ G I   LL    PF  G +D D + K+      
Sbjct: 209 LGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPF-GGQNDQDIIKKVEKGKYY 265

Query: 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
              + W ++                        SD+A +L+  M TYD   R TA++AL 
Sbjct: 266 FDFNDWKNI------------------------SDEAKELIKLMLTYDYNKRCTAEEALN 301

Query: 291 HRYFSSAPLPTEPNKLP 307
            R+          +   
Sbjct: 302 SRWIKKYANNINKSDQK 318

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  196 bits (500), Expect = 2e-59
 Identities = 91/323 (28%), Positives = 147/323 (45%), Gaps = 41/323 (12%)

Query: 7   SKKVADRY--LKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREI 62
              V   Y   K E+LG G +G V+K  +T TG  +A K I  R  K KE V      EI
Sbjct: 82  QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV----KNEI 137

Query: 63  KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL 121
            ++ +L   ++I+L DAF  K ++ LV E+++  +L   I + +  L+  D   +M+   
Sbjct: 138 SVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC 197

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHG--QLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
           +G+   H+ ++LH D+KP N+L  +    Q+K+ DFGLAR +  P  +         + A
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPEFLA 256

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           PE++          D+W+ G I   LL+   PFL G +D + L  I A            
Sbjct: 257 PEVVNY-DFVSFPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILAC----------- 303

Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
                    +           F   S++A + +SK+   +   RI+A +AL+H + S   
Sbjct: 304 --------RWDLEDEE-----FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK 350

Query: 299 LPTEPNKLPRPATKRASKASDFN 321
           L +  +   +    R S A DF 
Sbjct: 351 LHSRLSA--QKKKNRGSDAQDFV 371

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  193 bits (492), Expect = 3e-59
 Identities = 75/296 (25%), Positives = 124/296 (41%), Gaps = 44/296 (14%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
              + D ++ +  LG G +G V+   +  +G    IK I   + +  +      EI++LK
Sbjct: 17  QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME-QIEAEIEVLK 75

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMET----DLETVIRNTNIFLSPADIKSYMQMTLK 122
            L  P+II++ + F    N+++V E  E     +     +     LS   +   M+  + 
Sbjct: 76  SLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMN 135

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            LA+ H + V+H+D+KP N+L      H  +K+ DFGLA +F   D   T+      Y A
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHSTNAAGTALYMA 194

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA---FGTATPSQ 235
           PE+    +      D+W+AG +   LL    PF  G+S  +   K       +      +
Sbjct: 195 PEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPF-TGTSLEEVQQKATYKEPNY----AVE 247

Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
              L                        +  A+DLL +M T DP+ R +A Q L H
Sbjct: 248 CRPL------------------------TPQAVDLLKQMLTKDPERRPSAAQVLHH 279

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  192 bits (491), Expect = 4e-59
 Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 40/293 (13%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIKLL 65
           V D Y   E LG G + +V K     TG+  A   IKK RL   + GV+   + RE+ +L
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62

Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMTLKG 123
           +E++ P+II L D F +K ++ L+ E +   +L + +       L+  +   +++  L G
Sbjct: 63  REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDG 120

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
           + + H K + H D+KP N+++        ++KL DFG+A         F +      + A
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-AGNEFKNIFGTPEFVA 179

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           PE++   +  G   D+W+ G I   LL+   PFL G +  + L  I A            
Sbjct: 180 PEIVNY-EPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAV----------- 226

Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                    Y +         F + S+ A D + ++   DPK R+T  Q+LEH
Sbjct: 227 --------NYDFDEEY-----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  194 bits (494), Expect = 4e-59
 Identities = 76/310 (24%), Positives = 136/310 (43%), Gaps = 40/310 (12%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           + V D Y   E LG G + VV K  +  TG   A   IKK R    + GV+   + RE+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL-ETVIRNTNIFLSPADIKSYMQMTL 121
           +LKE++ P++I L + + +K ++ L+ E +   +L + +       L+  +   +++  L
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQIL 124

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLARIFGSPDRRFTHQVFARWY 177
            G+ + H   + H D+KP N+++        ++K+ DFGLA         F +      +
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNEFKNIFGTPEF 183

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
            APE++   +  G   D+W+ G I   LL+   PFL G +  + L  + A          
Sbjct: 184 VAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV--------- 232

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                      Y++         F + S  A D + ++   DPK R+T Q +L+H +   
Sbjct: 233 ----------NYEFEDEY-----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277

Query: 297 APLPTEPNKL 306
                  ++ 
Sbjct: 278 KDTQQALSRK 287

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  197 bits (503), Expect = 5e-59
 Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 35/297 (11%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           MA +    +  + Y   E LG+G + VV + +    GQ  A   I   K     +    R
Sbjct: 1   MATIT-CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER 59

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL-ETVIRNTNIFLSPADIKSYMQ 118
           E ++ + LK P+I+ L D+   +G+ +L+F+ +   +L E ++     + S AD    +Q
Sbjct: 60  EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQ 117

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFAR 175
             L+ +  CH+  V+HR++KP NLL+ S      +KLADFGLA       + +       
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177

Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPS 234
            Y +PE+L     YG  VD+WA G I   LL    PF           +I A        
Sbjct: 178 GYLSPEVLRK-DPYGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQQIKAG------- 228

Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                        Y + +       + + + +A DL++KM T +P  RITA +AL+H
Sbjct: 229 ------------AYDFPSPE-----WDTVTPEAKDLINKMLTINPSKRITAAEALKH 268

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  194 bits (495), Expect = 8e-59
 Identities = 56/332 (16%), Positives = 90/332 (27%), Gaps = 65/332 (19%)

Query: 12  DRYLKR-EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKELK 69
           +R LK  E L  G   VV+   D +  +  A+K   +G +        L         L 
Sbjct: 61  ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLL 120

Query: 70  SPHIIELIDAF--------------------------PHKGNLHLVFEFMETDLETVIR- 102
                E  D                                N  L+      DLE +   
Sbjct: 121 GESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFST 180

Query: 103 -----NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157
                          +       ++  A    K ++H    P+NL I   G+L L D   
Sbjct: 181 LDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSA 240

Query: 158 ARIFGSPDRRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELL-NRRPFLQGS 215
               G+   R         Y   E L  +   +   ++ W  G     +     PF   +
Sbjct: 241 LWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297

Query: 216 SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMF 275
             I    K                  +P      + +  PL        D    L+ +  
Sbjct: 298 PGIKGSWKR-------------PSLRVPGTDSLAFGSCTPL-------PDFVKTLIGRFL 337

Query: 276 TYDPKARITAQQALEHRYF------SSAPLPT 301
            +D + R+   +A+E   F       S+ L T
Sbjct: 338 NFDRRRRLLPLEAMETPEFLQLQNEISSSLST 369

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  194 bits (495), Expect = 9e-59
 Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 43/300 (14%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTALR 60
           +K+   +Y  ++V+G G   VV + +   TG   A+K + +  ++      E V     R
Sbjct: 89  AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148

Query: 61  EIKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYM 117
           E  +L+++   PHII LID++     + LVF+ M   +L + +       LS  + +S M
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIM 206

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
           +  L+ ++F H   ++HRD+KP N+L+  + Q++L+DFG +     P  +         Y
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE-PGEKLRELCGTPGY 265

Query: 178 RAPELLFGA-----KQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTA 231
            APE+L  +       YG  VD+WA G I   LL    PF        Q+  +       
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF----WHRRQIL-MLRMIMEG 320

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                          +YQ+ +       +   S    DL+S++   DP+AR+TA+QAL+H
Sbjct: 321 ---------------QYQFSSPE-----WDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  194 bits (494), Expect = 1e-58
 Identities = 87/293 (29%), Positives = 133/293 (45%), Gaps = 39/293 (13%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTAL-REIKL 64
           S K +D Y  +E LG+G + VV + +   TG   A K I    +K    +F  L RE ++
Sbjct: 24  STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN--TKKLSARDFQKLEREARI 81

Query: 65  LKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMTLK 122
            ++L+ P+I+ L D+   +   +LVF+ +   +L E ++     F S AD    +Q  L+
Sbjct: 82  CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILE 139

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            +A+CH   ++HR++KP NLL+ S      +KLADFGLA         +        Y +
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 198

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           PE+L     Y   VD+WA G I   LL    PF           +I A            
Sbjct: 199 PEVLKK-DPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQIKAG----------- 245

Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                    Y Y +       + + + +A  L+  M T +PK RITA QAL+ 
Sbjct: 246 --------AYDYPSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  194 bits (494), Expect = 1e-58
 Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 40/321 (12%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVA---IKKIRLGKQKEGVNFTAL-REIK 63
           +KV D Y   E LG G + +V K  +  TG   A   IKK +    + GV    + RE+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMTL 121
           +L+++  P+II L D + ++ ++ L+ E +   +L + + +     LS  +  S+++  L
Sbjct: 68  ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLARIFGSPDRRFTHQVFARWY 177
            G+ + H K + H D+KP N+++         +KL DFGLA         F +      +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEF 184

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
            APE++   +  G   D+W+ G I   LL+   PFL G +  + L  I A          
Sbjct: 185 VAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV--------- 233

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                      Y +         F   S+ A D + K+   + + R+T Q+AL H + + 
Sbjct: 234 ----------SYDFDEEF-----FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278

Query: 297 APLPTEPNKLPRPATKRASKA 317
                   +          K 
Sbjct: 279 VDTQQAMVRRESVVNLENFKK 299

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  193 bits (491), Expect = 7e-58
 Identities = 63/311 (20%), Positives = 113/311 (36%), Gaps = 47/311 (15%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
             +L  ++LG+G    V++    KTG   AIK    I   +  +      +RE ++LK+L
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ----MREFEVLKKL 64

Query: 69  KSPHIIELIDAF--PHKGNLHLVFEFMET-DLETVI--RNTNIFLSPADIKSYMQMTLKG 123
              +I++L          +  L+ EF     L TV+   +    L  ++    ++  + G
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 124 LAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLARIF----------GSPDRRFT 169
           +    +  ++HR++KP N++           KL DFG AR            G+ +    
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE---- 180

Query: 170 HQVFARWYRAPELLFGA-------KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQL 221
                  Y  P++   A       K+YGA VD+W+ G  F        PF +      + 
Sbjct: 181 -------YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF-RPFEGPRRN 232

Query: 222 GKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL-RSLFPSASDDALDLLSKMFTYDPK 280
            ++     T  PS         +     +    P+  SL          +L+ +   D +
Sbjct: 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQE 292

Query: 281 ARITAQQALEH 291
                 Q    
Sbjct: 293 KCWGFDQFFAE 303

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  189 bits (482), Expect = 7e-58
 Identities = 82/291 (28%), Positives = 125/291 (42%), Gaps = 42/291 (14%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIKLLK 66
            +   Y     +G G++G V  A+   T    A KKI     +  +       +EI+++K
Sbjct: 6   DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRF----KQEIEIMK 61

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMTLKGL 124
            L  P+II L + F    +++LV E     +L E V+         +D    M+  L  +
Sbjct: 62  SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAV 119

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
           A+CHK  V HRD+KP N L  +      LKL DFGLA  F  P +    +V   +Y +P+
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKVGTPYYVSPQ 178

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           +L     YG   D W+AG +   LL    PF    +D + + KI                
Sbjct: 179 VL--EGLYGPECDEWSAGVMMYVLLCGYPPF-SAPTDSEVMLKIREG------------- 222

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                  + +         + + S  A  L+ ++ T  PK RIT+ QALEH
Sbjct: 223 ------TFTFPEKD-----WLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  189 bits (482), Expect = 2e-57
 Identities = 69/312 (22%), Positives = 123/312 (39%), Gaps = 56/312 (17%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +  +   ++  EVLG G +  V+      TG+  A+K I+  K     + +   EI +LK
Sbjct: 4   TTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK--KSPAFRDSSLENEIAVLK 61

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMTLKGL 124
           ++K  +I+ L D +    + +LV + +   +L + ++       +  D    +Q  L  +
Sbjct: 62  KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAV 119

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIF---------GSPDRRFTHQV 172
            + H+  ++HRD+KP NLL  +     ++ + DFGL+++          G+P        
Sbjct: 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP-------- 171

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTA 231
               Y APE+L   K Y   VD W+ G I   LL    PF    ++     KI       
Sbjct: 172 ---GYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPF-YEETESKLFEKIKEG---- 222

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                    +   +              +   S+ A D +  +   DP  R T ++AL H
Sbjct: 223 ------YYEFESPF--------------WDDISESAKDFICHLLEKDPNERYTCEKALSH 262

Query: 292 RYFSSAPLPTEP 303
            +          
Sbjct: 263 PWIDGNTALHRD 274

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  188 bits (479), Expect = 5e-57
 Identities = 69/311 (22%), Positives = 100/311 (32%), Gaps = 48/311 (15%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
            YL  + LGEG +  V        G   A+K+I   +Q++     A RE  + +    P+
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE--AQREADMHRLFNHPN 87

Query: 73  IIELIDAF----PHKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           I+ L+         K    L+  F +   L   I        FL+   I   +    +GL
Sbjct: 88  ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL 147

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS-PDRRFTHQVFARW------- 176
              H K   HRD+KP N+L+G  GQ  L D G         +          W       
Sbjct: 148 EAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207

Query: 177 -YRAPELLFGAKQYGAG--VDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTAT 232
            YRAPEL             DVW+ GC+   ++    P+       D +           
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ---- 263

Query: 233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR 292
                    +P    +               S     LL+ M T DP  R      L   
Sbjct: 264 -------LSIPQSPRH---------------SSALWQLLNSMMTVDPHQRPHIPLLLSQL 301

Query: 293 YFSSAPLPTEP 303
                P P + 
Sbjct: 302 EALQPPAPGQH 312

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  189 bits (483), Expect = 7e-57
 Identities = 86/334 (25%), Positives = 143/334 (42%), Gaps = 56/334 (16%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
             DRY    ++G+G++G V KA D    + VAIK I+    K+     A  E++LL+ + 
Sbjct: 52  WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLELMN 108

Query: 70  SP------HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF--LSPADIKSYMQMTL 121
                   +I+ L   F  + +L LVFE +  +L  ++RNTN F  +S    + + Q   
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTN-FRGVSLNLTRKFAQQMC 167

Query: 122 KGLAFCH--KKWVLHRDMKPNNLLI--GSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177
             L F    +  ++H D+KP N+L+       +K+ DFG +       +R    + +R+Y
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFY 224

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS--- 234
           R+PE+L G   Y   +D+W+ GCI  E+    P   G++++DQ+ KI    G        
Sbjct: 225 RSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283

Query: 235 -----------------------------QWPDLAYLPDYVEYQYVAAPPLRSLFPSASD 265
                                        + P    L + +  +       R+     + 
Sbjct: 284 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTV 343

Query: 266 DA----LDLLSKMFTYDPKARITAQQALEHRYFS 295
                  DL+ +M  YDPK RI    AL+H +F 
Sbjct: 344 ADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  187 bits (476), Expect = 1e-56
 Identities = 81/337 (24%), Positives = 132/337 (39%), Gaps = 62/337 (18%)

Query: 7   SKKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKI--RLGKQKEGVNFTALREIK 63
           S +  D Y L+ +VLGEG +  V   I+  T Q  A+K I  + G  +  V     RE++
Sbjct: 7   SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV----FREVE 62

Query: 64  LLKELKS-PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL 121
           +L + +   +++ELI+ F  +   +LVFE M    + + I     F +  +    +Q   
Sbjct: 63  MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHF-NELEASVVVQDVA 121

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARW-- 176
             L F H K + HRD+KP N+L     Q   +K+ DF L       +   +         
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI-KLNGDCSPISTPELLT 180

Query: 177 ------YRAPELL----FGAKQYGAGVDVWAAGCI-----------FAELLNRRPFLQGS 215
                 Y APE++      A  Y    D+W+ G I                +   + +G 
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240

Query: 216 SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMF 275
           +       +F +                   +Y++         +   S  A DL+SK+ 
Sbjct: 241 ACPACQNMLFESIQEG---------------KYEFPDKD-----WAHISCAAKDLISKLL 280

Query: 276 TYDPKARITAQQALEHRYF----SSAPLPTEPNKLPR 308
             D K R++A Q L+H +         LPT P  L R
Sbjct: 281 VRDAKQRLSAAQVLQHPWVQGCAPENTLPT-PMVLQR 316

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  187 bits (476), Expect = 7e-56
 Identities = 85/348 (24%), Positives = 141/348 (40%), Gaps = 50/348 (14%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP- 71
           RY+    LG G +  V+ A D      VA+K +R     +     A  EIKLL+ +    
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDAD 76

Query: 72  ----------HIIELIDAFPHKGN--LH--LVFEFMETDLETVI-RNTNIFLSPADIKSY 116
                     HI++L+D F HKG   +H  +VFE +  +L  +I +  +  +    +K  
Sbjct: 77  NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136

Query: 117 MQMTLKGLAFCHKKW-VLHRDMKPNNLLI------GSHGQLKLADFGLARIFGSPDRRFT 169
            +  L GL + H++  ++H D+KP N+L+       +  Q+K+AD G A      D  +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHYT 193

Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG------SSDIDQLGK 223
           + +  R YR+PE+L GA  +G G D+W+  C+  EL+      +       + D D + +
Sbjct: 194 NSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252

Query: 224 IFAAFGTATP-----SQWPDLAYLPDYVEYQYVAAPP------LRSLFPSASDDA---LD 269
           I    G          ++    +    +               L   +  + D+A    D
Sbjct: 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312

Query: 270 LLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPATKRASKA 317
            LS M   DP+ R  A   + H +        E     R      S  
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDI 360

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  186 bits (474), Expect = 7e-56
 Identities = 83/319 (26%), Positives = 132/319 (41%), Gaps = 40/319 (12%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LL 65
           S +  D Y  +E +G G+Y V  + I   T    A+K I   K K         EI+ LL
Sbjct: 17  SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID--KSKRDP----TEEIEILL 70

Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           +  + P+II L D +     +++V E M+  +L   I     F S  +  + +    K +
Sbjct: 71  RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFF-SEREASAVLFTITKTV 129

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQ----LKLADFGLARIFGSPDRRFTHQVFARWYRAP 180
            + H + V+HRD+KP+N+L          +++ DFG A+   + +       +   + AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAP 189

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           E+L   + Y A  D+W+ G +   +L    PF  G  D  +  +I A  G+         
Sbjct: 190 EVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSG-------- 238

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS-AP 298
                  ++           + S SD A DL+SKM   DP  R+TA   L H +      
Sbjct: 239 -------KFSLSGGY-----WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ 286

Query: 299 LPTEPNKLPRPATKRASKA 317
           LP     L R       K 
Sbjct: 287 LPQYQ--LNRQDAPHLVKG 303

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  184 bits (468), Expect = 3e-55
 Identities = 79/324 (24%), Positives = 128/324 (39%), Gaps = 41/324 (12%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS- 70
           D  LK + LGEG++ +  K +  K+ Q  A+K I   K+ E       +EI  LK  +  
Sbjct: 11  DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEA---NTQKEITALKLCEGH 65

Query: 71  PHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P+I++L + F  + +  LV E +   +L   I+    F S  +    M+  +  ++  H 
Sbjct: 66  PNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHF-SETEASYIMRKLVSAVSHMHD 124

Query: 130 KWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
             V+HRD+KP NLL         +K+ DFG AR+    ++      F   Y APELL   
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQ 183

Query: 187 KQYGAGVDVWAAGCIFAELL-NRRPFL--QGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             Y    D+W+ G I   +L  + PF     S       +I                   
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG------------ 231

Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF------SSA 297
              ++ +         + + S +A DL+  + T DP  R+       + +       SS 
Sbjct: 232 ---DFSFEGEA-----WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSN 283

Query: 298 PLPTEPNKLPRPATKRASKASDFN 321
           PL T        A       + F+
Sbjct: 284 PLMTPDILGSSGAAVHTCVKATFH 307

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  182 bits (465), Expect = 2e-54
 Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 38/288 (13%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           ++D +     LG G   +VY+     T +  A+K ++    K+ V      EI +L  L 
Sbjct: 51  LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV----RTEIGVLLRLS 106

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DL-ETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
            P+II+L + F     + LV E +   +L + ++     + S  D    ++  L+ +A+ 
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYL 164

Query: 128 HKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           H+  ++HRD+KP NLL  +      LK+ADFGL++I                Y APE+L 
Sbjct: 165 HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPGYCAPEILR 223

Query: 185 GAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
           G   YG  VD+W+ G I   LL    PF     D     +I                   
Sbjct: 224 G-CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC---------------- 266

Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
              EY +++       +   S +A DL+ K+   DPK R+T  QAL+H
Sbjct: 267 ---EYYFISPW-----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  181 bits (461), Expect = 4e-54
 Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 43/297 (14%)

Query: 7   SKKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLL 65
              V D Y L ++VLG G  G V +    +TGQ  A+K +      +     A +E+   
Sbjct: 23  KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--DSPK-----ARQEVDHH 75

Query: 66  KELKS-PHIIELIDAF----PHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQ 118
            +    PHI+ ++D +      K  L ++ E ME       +    +   +  +    M+
Sbjct: 76  WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 135

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFAR 175
                + F H   + HRD+KP NLL  S  +   LKL DFG A+             +  
Sbjct: 136 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTP 193

Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           +Y APE+L G ++Y    D+W+ G I   LL    PF   ++       +          
Sbjct: 194 YYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPF-YSNTGQAISPGMKRRIRLG--- 248

Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                       +Y +         +   S+DA  L+  +   DP  R+T  Q + H
Sbjct: 249 ------------QYGFPNPE-----WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  179 bits (457), Expect = 2e-53
 Identities = 62/324 (19%), Positives = 125/324 (38%), Gaps = 59/324 (18%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTAL----- 59
            K  + Y     L +G +  +      K  +  A+K   K  L K+++            
Sbjct: 27  DKYINDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIK 84

Query: 60  -------REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME--------TDLETVIRNT 104
                   E++++ ++K+ + +       +   +++++E+ME             + +N 
Sbjct: 85  SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY 144

Query: 105 NIFLSPADIKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-- 161
             F+    IK  ++  L   ++ H +K + HRD+KP+N+L+  +G++KL+DFG +     
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204

Query: 162 -------GSPDRRFTHQVFARWYRAPELLFGAKQY-GAGVDVWAAGCIFAELLNRR-PFL 212
                  G+ +           +  PE       Y GA VD+W+ G     +     PF 
Sbjct: 205 KKIKGSRGTYE-----------FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF- 252

Query: 213 QGSSDIDQL-GKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLL 271
                + +L   I          ++P       Y      +      L    S++ +D L
Sbjct: 253 SLKISLVELFNNIRTK-----NIEYPLDRNHFLYPLTNKKSTCSNNFL----SNEDIDFL 303

Query: 272 SKMFTYDPKARITAQQALEHRYFS 295
                 +P  RIT++ AL+H + +
Sbjct: 304 KLFLRKNPAERITSEDALKHEWLA 327

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  178 bits (454), Expect = 9e-53
 Identities = 78/347 (22%), Positives = 130/347 (37%), Gaps = 52/347 (14%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFT--ALREIKLLK 66
           + +RY     LGEGT+G V + +D   G++ VA+K IR    K    +   A  EI +LK
Sbjct: 17  LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR-NVGK----YREAARLEINVLK 71

Query: 67  ELKSP------HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQM 119
           ++K          + + D F   G++ + FE +  +    ++  N        ++     
Sbjct: 72  KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 131

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-----------F 168
               L F H+  + H D+KP N+L  +     L +   +    S               F
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191

Query: 169 THQ-----VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGK 223
            H+     V  R YR PE++     +    DVW+ GCI  E        Q   + + L  
Sbjct: 192 DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250

Query: 224 IFAAFGTATPSQW-------------PDLAYLPDYVEYQYVAAP--PLRSLFPSASDD-- 266
           +    G                      L +  +  + +YV     PL+S     S +  
Sbjct: 251 MEKILGP--IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308

Query: 267 -ALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPATK 312
              DL+ +M  +DP  RIT  +AL H +F+            R  ++
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRNPSR 355

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  176 bits (448), Expect = 1e-52
 Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 51/306 (16%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
           + +    +LG+G++  VY+A    TG  VAIK   K  +   K G+      E+K+  +L
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM--YKAGMVQRVQNEVKIHCQL 68

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           K P I+EL + F     ++LV E     ++   ++N     S  + + +M   + G+ + 
Sbjct: 69  KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFT-----HQVFARWYRAPE 181
           H   +LHRD+  +NLL+  +  +K+ADFGLA     P  + +T     +      Y +PE
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN------YISPE 182

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           +      +G   DVW+ GC+F  LL  R PF    +  + L K+  A             
Sbjct: 183 IATR-SAHGLESDVWSLGCMFYTLLIGRPPF-DTDTVKNTLNKVVLA------------- 227

Query: 241 YLPDYVEYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
                 +Y+           PS  S +A DL+ ++   +P  R++    L+H + S    
Sbjct: 228 ------DYE----------MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSS 271

Query: 300 PTEPNK 305
               ++
Sbjct: 272 TKSKDE 277

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  177 bits (452), Expect = 1e-52
 Identities = 75/336 (22%), Positives = 126/336 (37%), Gaps = 54/336 (16%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFT--ALREIKLLK 66
           ++ RY   + LGEG +G V + ID K G + VA+K ++    +    +   A  EI++L+
Sbjct: 12  LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK-NVDR----YCEAARSEIQVLE 66

Query: 67  ELKSP------HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQM 119
            L +         +++++ F H G++ +VFE +       I+           I+     
Sbjct: 67  HLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQ 126

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-----------F 168
             K + F H   + H D+KP N+L       +  +  + R   +               +
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186

Query: 169 THQ-----VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGK 223
             +     V  R YRAPE++     +    DVW+ GCI  E              + L  
Sbjct: 187 DDEHHSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245

Query: 224 IFAAFGTATPS----------------QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDD- 266
           +    G                      W + +    YV     A  PL+    S   + 
Sbjct: 246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR---ACKPLKEFMLSQDVEH 302

Query: 267 --ALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
               DL+ KM  YDP  RIT ++AL+H +F      
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  175 bits (447), Expect = 1e-52
 Identities = 56/320 (17%), Positives = 105/320 (32%), Gaps = 62/320 (19%)

Query: 4   VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK 63
           + +  +    + + E +G G +G V+K +    G   AIK+ +           ALRE+ 
Sbjct: 3   MGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY 62

Query: 64  LLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIR---NTNIFLSPADIKSYMQ 118
               L +  H++    A+    ++ +  E+     L   I        +   A++K  + 
Sbjct: 63  AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL-------------------KLADFGLAR 159
              +GL + H   ++H D+KP+N+ I                         K+ D G   
Sbjct: 123 QVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182

Query: 160 IFGSPDRRFTHQVFA--RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD 217
              SP      QV      + A E+L     +    D++A            P  +    
Sbjct: 183 RISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236

Query: 218 IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTY 277
             ++ +                              P +  +    S +  +LL  M   
Sbjct: 237 WHEIRQG---------------------------RLPRIPQVL---SQEFTELLKVMIHP 266

Query: 278 DPKARITAQQALEHRYFSSA 297
           DP+ R +A   ++H    SA
Sbjct: 267 DPERRPSAMALVKHSVLLSA 286

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  178 bits (453), Expect = 3e-52
 Identities = 62/291 (21%), Positives = 116/291 (39%), Gaps = 41/291 (14%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS- 70
           D  +  +VLG G  G V +  + +T +  A+K ++     +     A RE++L       
Sbjct: 62  DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPK-----ARREVELHWRASQC 114

Query: 71  PHIIELIDAF----PHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           PHI+ ++D +      +  L +V E ++       +    +   +  +    M+   + +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            + H   + HRD+KP NLL  S      LKL DFG A+   +     T   +  +Y APE
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPYYVAPE 233

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           +L G ++Y    D+W+ G I   LL    PF   +  +     +                
Sbjct: 234 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMG--------- 282

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                 +Y++         +   S++   L+  +   +P  R+T  + + H
Sbjct: 283 ------QYEFPNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  173 bits (440), Expect = 1e-51
 Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 54/288 (18%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELI 77
            LG+G +G VY A + ++   +A+K +   + +K GV     RE+++   L+ P+I+ L 
Sbjct: 16  PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
             F     ++L+ E+     +   ++  + F       +Y+      L++CH K V+HRD
Sbjct: 76  GYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRVIHRD 134

Query: 137 MKPNNLLIGSHGQLKLADFGLARIF---------GSPDRRFTHQVFARWYRAPELLFGAK 187
           +KP NLL+GS G+LK+ADFG +            G+ D           Y  PE++ G +
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLD-----------YLPPEMIEG-R 182

Query: 188 QYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            +   VD+W+ G +  E L  + PF + ++  +   +I             +  + PD+V
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRV----------EFTF-PDFV 230

Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                            ++ A DL+S++  ++P  R   ++ LEH + 
Sbjct: 231 -----------------TEGARDLISRLLKHNPSQRPMLREVLEHPWI 261

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  174 bits (444), Expect = 1e-51
 Identities = 62/302 (20%), Positives = 115/302 (38%), Gaps = 43/302 (14%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
            ++       +  +G G++G V++  D +TG   A+KK+RL   +         E+    
Sbjct: 53  YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV-------EELVACA 105

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
            L SP I+ L  A      +++  E +E   L  +I+             Y+   L+GL 
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-ALYYLGQALEGLE 164

Query: 126 FCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFAR-----WYRA 179
           + H + +LH D+K +N+L+ S G +  L DFG A          +            + A
Sbjct: 165 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMA 224

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           PE++ G K   A VD+W++ C+   +LN   P+    +   +                  
Sbjct: 225 PEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPW----TQYFRGPLCL------------- 266

Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
              +           PP+R + PS +      + +    +P  R +A +       +   
Sbjct: 267 --KIAS-------EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317

Query: 299 LP 300
           + 
Sbjct: 318 VG 319

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  181 bits (461), Expect = 2e-51
 Identities = 66/311 (21%), Positives = 109/311 (35%), Gaps = 41/311 (13%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLK 66
            +    +  +E LG G +G V + I   TG+ VAIK+ R  ++    N      EI+++K
Sbjct: 10  TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR--QELSPKNRERWCLEIQIMK 67

Query: 67  ELKSPHIIELIDAFPHKGNLH------LVFEFMET-DLETVI--RNTNIFLSPADIKSYM 117
           +L  P+++   +       L       L  E+ E  DL   +        L    I++ +
Sbjct: 68  KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIF----------GSP 164
                 L + H+  ++HRD+KP N+++    Q    K+ D G A+            G+ 
Sbjct: 128 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTL 187

Query: 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224
                       Y APELL   K+Y   VD W+ G +  E +        +    Q    
Sbjct: 188 Q-----------YLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGK 235

Query: 225 FAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT 284
                      + DL     +        P    L    +      L  M  +  + R T
Sbjct: 236 VREKSNEHIVVYDDLTGAVKFSSVL----PTPNHLSGILAGKLERWLQCMLMWHQRQRGT 291

Query: 285 AQQALEHRYFS 295
             Q      F 
Sbjct: 292 DPQNPNVGCFQ 302

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  175 bits (445), Expect = 2e-51
 Identities = 68/336 (20%), Positives = 123/336 (36%), Gaps = 60/336 (17%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT--ALREIKLLKE 67
           + + +L    +G+GT+G V         +  A+K +R   +K    +T  A  E  +LK+
Sbjct: 33  LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVR-NIKK----YTRSAKIEADILKK 87

Query: 68  LKS-----PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQMTL 121
           +++      +I++    F +  ++ L+FE +   L  +I   N       DIK Y    L
Sbjct: 88  IQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEIL 147

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHG-------------------------QLKLADFG 156
           K L +  K  + H D+KP N+L+                              +KL DFG
Sbjct: 148 KALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG 207

Query: 157 LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216
            A  F          +  R YRAPE++     +    D+W+ GC+ AEL       +   
Sbjct: 208 CA-TFK--SDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHE 263

Query: 217 DIDQLGKIFAAFGTATPS----------------QWPDLAYLPDYVEYQYV-AAPPLRSL 259
            ++ L  + +       +                    LA+  +      +        L
Sbjct: 264 HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPL 323

Query: 260 FPSASDDAL-DLLSKMFTYDPKARITAQQALEHRYF 294
           +     +   D L  +   DP  R +  + L+H++ 
Sbjct: 324 YKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  173 bits (440), Expect = 5e-51
 Identities = 76/341 (22%), Positives = 124/341 (36%), Gaps = 73/341 (21%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKS 70
            RY++   LG+G +   ++  D  T +  A K +      K         EI + + L  
Sbjct: 41  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 100

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF--------LSPADIKSYMQMTLK 122
            H++     F     + +V E          R  ++         L+  + + Y++  + 
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLEL--------CRRRSLLELHKRRKALTEPEARYYLRQIVL 152

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-----------GSPDRRFTHQ 171
           G  + H+  V+HRD+K  NL +    ++K+ DFGLA              G+P+      
Sbjct: 153 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN------ 206

Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231
                Y APE+L   K +   VDVW+ GCI   LL  +P  + S   +   +I       
Sbjct: 207 -----YIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN---- 256

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALE 290
                          EY            P   +  A  L+ KM   DP AR T  + L 
Sbjct: 257 ---------------EYS----------IPKHINPVAASLIQKMLQTDPTARPTINELLN 291

Query: 291 HRYFSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSP 331
             +F+S  +P    +LP        + S       P+   P
Sbjct: 292 DEFFTSGYIPA---RLPITCLTIPPRFSIAPSSLDPSNRKP 329

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  171 bits (437), Expect = 5e-51
 Identities = 75/322 (23%), Positives = 120/322 (37%), Gaps = 77/322 (23%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
            RY++   LG+G +   ++  D  T +  A K   K  L   K         EI + + L
Sbjct: 15  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSL 72

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF--------LSPADIKSYMQMT 120
              H++     F     + +V E          R  ++         L+  + + Y++  
Sbjct: 73  AHQHVVGFHGFFEDNDFVFVVLEL--------CRRRSLLELHKRRKALTEPEARYYLRQI 124

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-----------GSPDRRFT 169
           + G  + H+  V+HRD+K  NL +    ++K+ DFGLA              G+P+    
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN---- 180

Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFG 229
                  Y APE+L   K +   VDVW+ GCI   LL  +P  + S   +   +I     
Sbjct: 181 -------YIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-- 230

Query: 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQA 288
                            EY            P   +  A  L+ KM   DP AR T  + 
Sbjct: 231 -----------------EYS----------IPKHINPVAASLIQKMLQTDPTARPTINEL 263

Query: 289 LEHRYFSSAPLPTEPNKLPRPA 310
           L   +F+S  +P    +LP   
Sbjct: 264 LNDEFFTSGYIPA---RLPITC 282

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  171 bits (434), Expect = 4e-50
 Identities = 75/342 (21%), Positives = 124/342 (36%), Gaps = 61/342 (17%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-P 71
           R   R VL EG +  VY+A D  +G+  A+K++ L  ++E      ++E+  +K+L   P
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRL-LSNEEEKNR-AIIQEVCFMKKLSGHP 86

Query: 72  HIIELIDAFPHK-----GNLHLVFEFME----TDLETVI-RNTNIFLSPADIKSYMQMTL 121
           +I++   A                   E      +E +    +   LS   +      T 
Sbjct: 87  NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC 146

Query: 122 KGLAFCH--KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARW-- 176
           + +   H  K  ++HRD+K  NLL+ + G +KL DFG A      PD  ++ Q  A    
Sbjct: 147 RAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206

Query: 177 ---------YRAPEL--LFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKI 224
                    YR PE+  L+     G   D+WA GCI   L  R+ PF  G+       +I
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA-----KLRI 261

Query: 225 FAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT 284
                                 +Y     PP      +       L+  M   +P+ R++
Sbjct: 262 VNG-------------------KYSI---PP----HDTQYTVFHSLIRAMLQVNPEERLS 295

Query: 285 AQQALEHRYFSSAPLPTEPNKLPRPATKRASKASDFNPQEGP 326
             + +      +A     P        ++           GP
Sbjct: 296 IAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATLSRGP 337

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  168 bits (428), Expect = 1e-49
 Identities = 56/291 (19%), Positives = 105/291 (36%), Gaps = 62/291 (21%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS- 70
           D  +  +VLG G  G V +  + +T +  A+K ++     +     A RE++L       
Sbjct: 18  DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPK-----ARREVELHWRASQC 70

Query: 71  PHIIELIDAF----PHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGL 124
           PHI+ ++D +      +  L +V E ++       +    +   +  +    M+   + +
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            + H   + HRD+KP NLL  S      LKL DFG A                      E
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---------------------KE 169

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
                ++Y    D+W+ G I   LL    PF   +  +     +                
Sbjct: 170 TT--GEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISPGMKTRIRMG--------- 217

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                 +Y++         +   S++   L+  +   +P  R+T  + + H
Sbjct: 218 ------QYEFPNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  168 bits (427), Expect = 1e-49
 Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 46/299 (15%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKELKS 70
           D    R VLG+GTYG+VY   D      +AIK+I     +       L  EI L K LK 
Sbjct: 22  DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY---SQPLHEEIALHKHLKH 78

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPAD--IKSYMQMTLKGLAFC 127
            +I++ + +F   G + +  E +    L  ++R+    L   +  I  Y +  L+GL + 
Sbjct: 79  KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138

Query: 128 HKKWVLHRDMKPNNLLIGSH-GQLKLADFGLA-RIFGSPDRRFTHQ--VFARWYRAPELL 183
           H   ++HRD+K +N+LI ++ G LK++DFG + R+ G      T    +    Y APE++
Sbjct: 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ---YMAPEII 195

Query: 184 FGAKQ-YGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ-LGKIFA-AFGTATPSQWPDL 239
               + YG   D+W+ GC   E+   + PF     ++ +    +F        P      
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPPF----YELGEPQAAMFKVGMFKVHPE----- 246

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
             +P+                 S S +A   + K F  DP  R  A   L   +   + 
Sbjct: 247 --IPE-----------------SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  167 bits (424), Expect = 3e-49
 Identities = 80/306 (26%), Positives = 135/306 (44%), Gaps = 54/306 (17%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELI 77
            LG+G +G VY A + +    +A+K +   + +KEGV     REI++   L+ P+I+ + 
Sbjct: 21  PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
           + F  +  ++L+ EF    +L   ++    F       ++M+     L +CH++ V+HRD
Sbjct: 81  NYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCHERKVIHRD 139

Query: 137 MKPNNLLIGSHGQLKLADFGLARIF---------GSPDRRFTHQVFARWYRAPELLFGAK 187
           +KP NLL+G  G+LK+ADFG +            G+ D           Y  PE++ G K
Sbjct: 140 IKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLD-----------YLPPEMIEG-K 187

Query: 188 QYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
            +   VD+W AG +  E L    PF    S  +   +I             DL + P ++
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPF-DSPSHTETHRRIVNV----------DLKF-PPFL 235

Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKL 306
                            SD + DL+SK+  Y P  R+  +  +EH +  +      P   
Sbjct: 236 -----------------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVY 278

Query: 307 PRPATK 312
               +K
Sbjct: 279 QSTQSK 284

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  166 bits (423), Expect = 6e-49
 Identities = 76/323 (23%), Positives = 137/323 (42%), Gaps = 81/323 (25%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTAL---------- 59
           +Y  ++ +G+G+YGVV  A +       A+K   K +L +Q                   
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73

Query: 60  -----------REIKLLKELKSPHIIELID--AFPHKGNLHLVFEFMET-DLETVIRNTN 105
                      +EI +LK+L  P++++L++    P++ +L++VFE +    +  V     
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133

Query: 106 IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---- 161
             LS    + Y Q  +KG+ + H + ++HRD+KP+NLL+G  G +K+ADFG++  F    
Sbjct: 134 --LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191

Query: 162 -------GSPDRRFTHQVFARWYRAPELLFGA-KQY-GAGVDVWAAGCI-FAELLNRRPF 211
                  G+P            + APE L    K + G  +DVWA G   +  +  + PF
Sbjct: 192 ALLSNTVGTPA-----------FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240

Query: 212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLL 271
                 +    KI +                      ++   P      P  ++D  DL+
Sbjct: 241 -MDERIMCLHSKIKSQ-------------------ALEF---PD----QPDIAEDLKDLI 273

Query: 272 SKMFTYDPKARITAQQALEHRYF 294
           ++M   +P++RI   +   H + 
Sbjct: 274 TRMLDKNPESRIVVPEIKLHPWV 296

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  163 bits (415), Expect = 7e-48
 Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 45/294 (15%)

Query: 13  RYLKR-EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           R+LK    +G G++  VYK +DT+T   VA  +++  K  +        E ++LK L+ P
Sbjct: 26  RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHP 85

Query: 72  HIIELIDAF----PHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +I+   D++      K  + LV E M +  L+T ++   +      ++S+ +  LKGL F
Sbjct: 86  NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKV-LRSWCRQILKGLQF 144

Query: 127 CH--KKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDRRF---THQVFARWYRAP 180
            H     ++HRD+K +N+ I G  G +K+ D GLA +  +   +    T +    +  AP
Sbjct: 145 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE----FM-AP 199

Query: 181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           E+    ++Y   VDV+A G    E+          S+     +I+    +       D  
Sbjct: 200 EM--YEEKYDESVDVYAFGMCMLEMATSEYPY---SECQNAAQIYRRVTSGVKPASFD-- 252

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                                 A  +  +++      +   R + +  L H +F
Sbjct: 253 --------------------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  163 bits (416), Expect = 9e-48
 Identities = 72/325 (22%), Positives = 128/325 (39%), Gaps = 76/325 (23%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELK 69
           +YL  ++LGEG+YG V + +D++T    A+K   K +L ++         +EI+LL+ L+
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKL-RRIPNGEANVKKEIQLLRRLR 64

Query: 70  SPHIIELIDAFPH--KGNLHLVFEFMETDLETVIRNTNIF-------LSPADIKSYMQMT 120
             ++I+L+D   +  K  +++V E+    ++       +                Y    
Sbjct: 65  HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQ------EMLDSVPEKRFPVCQAHGYFCQL 118

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-------------GSPDRR 167
           + GL + H + ++H+D+KP NLL+ + G LK++  G+A                GSP   
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA-- 176

Query: 168 FTHQVFARWYRAPELLFGAKQY-GAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIF 225
                    ++ PE+  G   + G  VD+W+AG   +       PF +G +       I 
Sbjct: 177 ---------FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFENIG 226

Query: 226 AA-FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT 284
              +             +P                         DLL  M  Y+P  R +
Sbjct: 227 KGSY------------AIPGDC-----------------GPPLSDLLKGMLEYEPAKRFS 257

Query: 285 AQQALEHRYFSSAPLPTEPNKLPRP 309
            +Q  +H +F     P E      P
Sbjct: 258 IRQIRQHSWFRKKHPPAEAPVPIPP 282

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  162 bits (412), Expect = 2e-47
 Identities = 68/308 (22%), Positives = 112/308 (36%), Gaps = 74/308 (24%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
           + +   + LGEG YG V  A++  T + VA+K     R     E +     +EI + K L
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKML 62

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF--------LSPADIKSYMQMT 120
              ++++           +L  E+             +F        +   D + +    
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEY--------CSGGELFDRIEPDIGMPEPDAQRFFHQL 114

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-------------GSPDRR 167
           + G+ + H   + HRD+KP NLL+     LK++DFGLA +F             G+    
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP-- 172

Query: 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFA 226
                    Y APELL   + +   VDVW+ G +  A L    P+ Q S    +      
Sbjct: 173 ---------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223

Query: 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
                               +       P + +        L LL K+   +P ARIT  
Sbjct: 224 K-------------------KTYL---NPWKKI----DSAPLALLHKILVENPSARITIP 257

Query: 287 QALEHRYF 294
              + R++
Sbjct: 258 DIKKDRWY 265

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  163 bits (414), Expect = 3e-47
 Identities = 61/307 (19%), Positives = 116/307 (37%), Gaps = 68/307 (22%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTAL-RE 61
            + + +Y     LG G +G V+ A+D +  + V +K     K+      E      +  E
Sbjct: 20  GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLE 79

Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLET---VIRNTNIFLSPADIKSYMQ 118
           I +L  ++  +II+++D F ++G   LV E   + L+    + R+    L         +
Sbjct: 80  IAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIFR 137

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRF 168
             +  + +   K ++HRD+K  N++I     +KL DFG A             G+ +   
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIE--- 194

Query: 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAA 227
                   Y APE+L G    G  +++W+ G   +  +    PF        +L +   A
Sbjct: 195 --------YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF-------CELEETVEA 239

Query: 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
                        + P  V                 S + + L+S +    P+ R T ++
Sbjct: 240 -----------AIHPPYLV-----------------SKELMSLVSGLLQPVPERRTTLEK 271

Query: 288 ALEHRYF 294
            +   + 
Sbjct: 272 LVTDPWV 278

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  162 bits (413), Expect = 4e-47
 Identities = 72/338 (21%), Positives = 122/338 (36%), Gaps = 77/338 (22%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKEL 68
           + +   + LGEG YG V  A++  T + VA+K     R     E +     +EI + K L
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKML 62

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF--------LSPADIKSYMQMT 120
              ++++           +L  E+             +F        +   D + +    
Sbjct: 63  NHENVVKFYGHRREGNIQYLFLEY--------CSGGELFDRIEPDIGMPEPDAQRFFHQL 114

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-------------GSPDRR 167
           + G+ + H   + HRD+KP NLL+     LK++DFGLA +F             G+    
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP-- 172

Query: 168 FTHQVFARWYRAPELLFGAKQY-GAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIF 225
                    Y APELL   +++    VDVW+ G +  A L    P+ Q S    +     
Sbjct: 173 ---------YVAPELLKR-REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222

Query: 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA 285
                                +       P + +        L LL K+   +P ARIT 
Sbjct: 223 EK-------------------KTYL---NPWKKI----DSAPLALLHKILVENPSARITI 256

Query: 286 QQALEHRYFSSAPLPTEPNKLPRPATKRASKASDFNPQ 323
               + R++ + PL     +    +   +   S F+  
Sbjct: 257 PDIKKDRWY-NKPLKKGAKRPRVTSGGVSESPSGFSKH 293

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  162 bits (412), Expect = 5e-47
 Identities = 76/312 (24%), Positives = 117/312 (37%), Gaps = 48/312 (15%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTAL-REIK 63
           + +  +Y    +LG G +G VY  I       VAIK   K R+    E  N T +  E+ 
Sbjct: 39  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98

Query: 64  LLKELKS--PHIIELIDAFPHKGNLHLVFEFMET--DLETVIRNTNIFLSPADIKSYMQM 119
           LLK++ S    +I L+D F    +  L+ E  E   DL   I      L     +S+   
Sbjct: 99  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQ 157

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
            L+ +  CH   VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y 
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 215

Query: 179 APELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
            PE +   + +G    VW+ G + +  +    PF       +   +I             
Sbjct: 216 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------EHDEEIIRG---------- 258

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
              +    V                 S +   L+       P  R T ++   H +    
Sbjct: 259 -QVFFRQRV-----------------SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300

Query: 298 PLPTEPNKLPRP 309
            LP E  ++   
Sbjct: 301 LLPQETAEIHLH 312

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  159 bits (403), Expect = 3e-45
 Identities = 46/340 (13%), Positives = 97/340 (28%), Gaps = 83/340 (24%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALRE----IKLLKEL 68
             ++  VLG+       +A D +TG++  +      ++        ++E    ++LL+ +
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133

Query: 69  KSPHIIEL-------IDAFPHKG-----------------NLHLVFEFMETDLETVIR-- 102
           K+    ++        D                       +   ++  M+++L+T     
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193

Query: 103 ----NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158
               +T+  L            ++ LA  H   ++H  ++P ++++   G + L  F   
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 253

Query: 159 RIFGSPDRRFTHQVFARWYRAPELL----------FGAKQYGAGVDVWAAGCIFAELL-N 207
              G           +R +  PEL                     D WA G +   +   
Sbjct: 254 VRDG----ARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309

Query: 208 RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDA 267
             P     + +     IF            ++                            
Sbjct: 310 DLPI-TKDAALGGSEWIF--------RSCKNI------------------------PQPV 336

Query: 268 LDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
             LL     Y  + R+   QA+E   +           LP
Sbjct: 337 RALLEGFLRYPKEDRLLPLQAMETPEYEQLR-TELSAALP 375

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  157 bits (399), Expect = 5e-45
 Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 63/299 (21%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIK-----KIRLGKQKEGVNFTALREIKLLKE 67
            Y+ RE LGEG++G V  A   KT Q VA+K      ++       V     REI  LK 
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVE----REISYLKL 65

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           L+ PHII+L D      ++ +V E+   +L   I      ++  + + + Q  +  + +C
Sbjct: 66  LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVE-KKRMTEDEGRRFFQQIICAIEYC 124

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWY 177
           H+  ++HRD+KP NLL+  +  +K+ADFGL+ I           GSP+           Y
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN-----------Y 173

Query: 178 RAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAA-FGTATPSQ 235
            APE++ G    G  VDVW+ G + +  L+ R PF       +   K+ +  +       
Sbjct: 174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-DDEFIPNLFKKVNSCVY------- 225

Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                 +PD++                 S  A  L+ +M   DP  RIT Q+     +F
Sbjct: 226 -----VMPDFL-----------------SPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  157 bits (398), Expect = 6e-45
 Identities = 71/309 (22%), Positives = 127/309 (41%), Gaps = 53/309 (17%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
            Y   + +G+G +  V  A    TG+ VAIK I   +          RE++++K L  P+
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I++L +    +  L+L+ E+    ++   +      +   + +S  +  +  + +CH+K 
Sbjct: 76  IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKR 134

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPE 181
           ++HRD+K  NLL+ +   +K+ADFG +  F          G+P            Y APE
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAP-----------PYAAPE 183

Query: 182 LLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           L  G K  G  VDVW+ G I +  +    PF  G +  +   ++                
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRG-----------KY 231

Query: 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
            +P Y+                 S D  +LL +    +P  R T +Q ++ R+ ++    
Sbjct: 232 RIPFYM-----------------STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 274

Query: 301 TEPNKLPRP 309
            E      P
Sbjct: 275 DELKPFVEP 283

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  155 bits (394), Expect = 7e-45
 Identities = 82/313 (26%), Positives = 122/313 (38%), Gaps = 71/313 (22%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSP 71
            Y+  + LG GT+G V       TG  VA+K +   K +   V     REI+ LK  + P
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF--------LSPADIKSYMQMTLKG 123
           HII+L        +  +V E+        +    +F        +   + +   Q  L  
Sbjct: 72  HIIKLYQVISTPTDFFMVMEY--------VSGGELFDYICKHGRVEEMEARRLFQQILSA 123

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVF 173
           + +CH+  V+HRD+KP N+L+ +H   K+ADFGL+ +           GSP+        
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN-------- 175

Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAA-FGTA 231
              Y APE++ G    G  VD+W+ G I +A L    PF           KI    F   
Sbjct: 176 ---YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-DDEHVPTLFKKIRGGVF--- 228

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                    Y+P+Y+                 +     LL  M   DP  R T +   EH
Sbjct: 229 ---------YIPEYL-----------------NRSVATLLMHMLQVDPLKRATIKDIREH 262

Query: 292 RYF-SSAPLPTEP 303
            +F    P    P
Sbjct: 263 EWFKQDLPSYLFP 275

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  158 bits (401), Expect = 8e-45
 Identities = 67/358 (18%), Positives = 115/358 (32%), Gaps = 43/358 (12%)

Query: 11  ADRYLKREVLGEG--TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
              Y    V+G+G      V  A    TG+ V +++I L      +      E+ + K  
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             P+I+     F     L +V  FM      DL  +  +    ++   I   +Q  LK L
Sbjct: 84  NHPNIVPYRATFIADNELWVVTSFMAYGSAKDL--ICTHFMDGMNELAIAYILQGVLKAL 141

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG-LARIFGSPDRRFTHQVFAR-------W 176
            + H    +HR +K +++LI   G++ L+       +     R+     F +       W
Sbjct: 142 DYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPW 201

Query: 177 YRAPELLF-GAKQYGAGVDVWAAGC--------------------IFAELLNRRPFLQGS 215
             +PE+L    + Y A  D+++ G                     +  +L    P L  +
Sbjct: 202 L-SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260

Query: 216 SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMF 275
           S I       +   +   S   D                P      + S      + +  
Sbjct: 261 STIPAEELTMSPSRSVANSGLSDSLTTSTP--RPSNGDSPSHPYHRTFSPHFHHFVEQCL 318

Query: 276 TYDPKARITAQQALEHRYFSSA-PLPTE--PNKLPRPATKRASKASDFNPQEGPTVLS 330
             +P AR +A   L H +F       +E  P  L         + S      G   L 
Sbjct: 319 QRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSGIFGLV 376

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  157 bits (398), Expect = 8e-45
 Identities = 71/348 (20%), Positives = 130/348 (37%), Gaps = 65/348 (18%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL- 59
           +AE+         +     +G G++G VY A D +  + VAIKK+    ++    +  + 
Sbjct: 43  VAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII 102

Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM 119
           +E++ L++L+ P+ I+    +  +    LV E+       ++      L   +I +    
Sbjct: 103 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHG 162

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA---RW 176
            L+GLA+ H   ++HRD+K  N+L+   G +KL DFG A          +   F     W
Sbjct: 163 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANS---FVGTPYW 216

Query: 177 YRAPELLFGAKQ--YGAGVDVWAAGCIFA-ELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
             APE++    +  Y   VDVW+ G I   EL  R+P                      P
Sbjct: 217 M-APEVILAMDEGQYDGKVDVWSLG-ITCIELAERKP----------------------P 252

Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLF------------PSASDDALDLLSKMFTYDPKA 281
                                 + +L+               S+   + +       P+ 
Sbjct: 253 ----------------LFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD 296

Query: 282 RITAQQALEHRYFSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVL 329
           R T++  L+HR+      PT    L +       +  +   ++   +L
Sbjct: 297 RPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKIL 344

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  154 bits (392), Expect = 2e-44
 Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 75/328 (22%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELK 69
            +Y + E +G+G  G VY A+D  TGQ VAI+++ L +Q  KE +    + EI +++E K
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI----INEILVMRENK 75

Query: 70  SPHIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           +P+I+  +D++     L +V E++     TD+   +  T   +    I +  +  L+ L 
Sbjct: 76  NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV---VTETC--MDEGQIAAVCRECLQALE 130

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLF 184
           F H   V+HRD+K +N+L+G  G +KL DFG  A+I     +R T  V   ++ APE++ 
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT 189

Query: 185 GAKQYGAGVDVWAAGCIFA-ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             K YG  VD+W+ G I A E++   P                      P          
Sbjct: 190 R-KAYGPKVDIWSLG-IMAIEMIEGEP----------------------P---------- 215

Query: 244 DYVEYQYVAAPPLRSLF-------PS------ASDDALDLLSKMFTYDPKARITAQQALE 290
                 Y+   PLR+L+       P        S    D L++    D + R +A++ L+
Sbjct: 216 ------YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269

Query: 291 HRYFSSAPLPTEPNKLPRPATKRASKAS 318
           H++   A    +P     P    A +A+
Sbjct: 270 HQFLKIA----KPLSSLTPLIAAAKEAT 293

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  155 bits (393), Expect = 3e-44
 Identities = 67/316 (21%), Positives = 115/316 (36%), Gaps = 52/316 (16%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTAL-REIK 63
           +     Y    +LG+G +G V+          VAIK   + R+       +      E+ 
Sbjct: 27  EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86

Query: 64  LLKELKS----PHIIELIDAFPHKGNLHLVFEFMET--DLETVIRNTNIFLSPADIKSYM 117
           LL ++ +    P +I L+D F  +    LV E      DL   I      L     + + 
Sbjct: 87  LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFF 145

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176
              +  +  CH + V+HRD+K  N+LI    G  KL DFG   +    D  +T     R 
Sbjct: 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL--HDEPYTDFDGTRV 203

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
           Y  PE +   + +     VW+ G + +  +    PF       ++  +I  A        
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF-------ERDQEILEA-------- 248

Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
             +L + P +V                 S D   L+ +     P +R + ++ L   +  
Sbjct: 249 --EL-HFPAHV-----------------SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288

Query: 296 S--APLPTEPNKLPRP 309
           +    +P  P+K    
Sbjct: 289 TPAEDVPLNPSKGGPA 304

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  154 bits (391), Expect = 6e-44
 Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 67/310 (21%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
                   +GEG+ G+V  A +  +G+ VA+K + L KQ+         E+ ++++ +  
Sbjct: 45  LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL--FNEVVIMRDYQHF 102

Query: 72  HIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +++E+  ++     L ++ EF++    TD+ + +R     L+   I +  +  L+ LA+ 
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYL 157

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGA 186
           H + V+HRD+K +++L+   G++KL+DFG  A+I     +R +  V   ++ APE++   
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL-VGTPYWMAPEVISR- 215

Query: 187 KQYGAGVDVWAAGCIFA-ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
             Y   VD+W+ G I   E+++  P                      P            
Sbjct: 216 SLYATEVDIWSLG-IMVIEMVDGEP----------------------P------------ 240

Query: 246 VEYQYVAAPPLRSLF------------PSA-SDDALDLLSKMFTYDPKARITAQQALEHR 292
               Y +  P++++                 S    D L +M   DP+ R TAQ+ L+H 
Sbjct: 241 ----YFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296

Query: 293 YFSSAPLPTE 302
           +     LP  
Sbjct: 297 FLLQTGLPEC 306

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  153 bits (387), Expect = 4e-43
 Identities = 73/306 (23%), Positives = 125/306 (40%), Gaps = 25/306 (8%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
            D + K   LG G  GVV+K     +G  +A K I L + K  +    +RE+++L E  S
Sbjct: 32  DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNS 90

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYM-QMTLKGLAFCH 128
           P+I+    AF   G + +  E M+   L+ V++       P  I   +    +KGL +  
Sbjct: 91  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLR 148

Query: 129 KKW-VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           +K  ++HRD+KP+N+L+ S G++KL DFG++          +  V  R Y +PE L G  
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SF-VGTRSYMSPERLQG-T 205

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
            Y    D+W+ G    E+   R  +      +                 P        + 
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265

Query: 248 YQYVAAPPLRSLF-----------PSA-----SDDALDLLSKMFTYDPKARITAQQALEH 291
              + + P  ++F           P       S +  D ++K    +P  R   +Q + H
Sbjct: 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325

Query: 292 RYFSSA 297
            +   +
Sbjct: 326 AFIKRS 331

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  154 bits (390), Expect = 4e-43
 Identities = 52/361 (14%), Positives = 102/361 (28%), Gaps = 79/361 (21%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALRE----IKLLKEL 68
             ++  VLG+       +A D +TG++  +      ++        ++E    ++LL+ +
Sbjct: 79  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 138

Query: 69  KSP-------HIIELIDAFPHKG-----------------NLHLVFEFMETDLETVIR-- 102
           K+          I   D                       +   ++  M+++L+T     
Sbjct: 139 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 198

Query: 103 ----NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158
               +T+  L            ++ LA  H   ++H  ++P ++++   G + L  F   
Sbjct: 199 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 258

Query: 159 RIFGSPDRRFTHQVF-ARWYRAPELLFGAKQ----YGAGVDVWAAGCIFAELL-NRRPFL 212
              G+       + F      A  +L   +          D W  G     +     P  
Sbjct: 259 VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN- 317

Query: 213 QGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLS 272
              + +     IF                +P  V                       LL 
Sbjct: 318 TDDAALGGSEWIF-----------RSCKNIPQPVR---------------------ALLE 345

Query: 273 KMFTYDPKARITAQQALEHRYFS------SAPLPTEPNKLPRPATKRASKASDFNPQEGP 326
               Y  + R+   QA+E   +       SA LP             A  +    P E  
Sbjct: 346 GFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTDGEPTREGGAPPSGTSQPDEAG 405

Query: 327 T 327
            
Sbjct: 406 A 406

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  150 bits (382), Expect = 7e-43
 Identities = 76/314 (24%), Positives = 126/314 (40%), Gaps = 37/314 (11%)

Query: 1   MAEVDLSKK---VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT 57
           M+E   +       D Y  +EV+G G   VV  A      + VAIK+I L K +  ++  
Sbjct: 1   MSEDSSALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-E 59

Query: 58  ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIF----LS 109
            L+EI+ + +   P+I+    +F  K  L LV + +      D+   I          L 
Sbjct: 60  LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119

Query: 110 PADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPD--R 166
            + I + ++  L+GL + HK   +HRD+K  N+L+G  G +++ADFG+ A +    D  R
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179

Query: 167 RFTHQVFA---RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGK 223
               + F     W  APE++   + Y    D+W+ G    EL               +  
Sbjct: 180 NKVRKTFVGTPCWM-APEVMEQVRGYDFKADIWSFGITAIELATGAAPY---HKYPPMKV 235

Query: 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283
           +        PS    +       +Y                     ++S     DP+ R 
Sbjct: 236 LMLTLQNDPPSLETGVQDKEMLKKY---------------GKSFRKMISLCLQKDPEKRP 280

Query: 284 TAQQALEHRYFSSA 297
           TA + L H++F  A
Sbjct: 281 TAAELLRHKFFQKA 294

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  150 bits (381), Expect = 9e-43
 Identities = 78/324 (24%), Positives = 129/324 (39%), Gaps = 74/324 (22%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
              V       + +     LG+G +G VYKA + +TG   A K I    ++E  ++  + 
Sbjct: 8   YEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY--IV 65

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSY 116
           EI++L     P+I++L+ A+ H G L ++ EF        +   +   +  L+   I+  
Sbjct: 66  EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI---MLELDRGLTEPQIQVV 122

Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFA- 174
            +  L+ L F H K ++HRD+K  N+L+   G ++LADFG+ A+   +  +R +   F  
Sbjct: 123 CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS---FIG 179

Query: 175 --RWYRAPELLFGA----KQYGAGVDVWAAGCIFA-ELLNRRPFLQGSSDIDQLGKIFAA 227
              W  APE++         Y    D+W+ G I   E+    P                 
Sbjct: 180 TPYWM-APEVVMCETMKDTPYDYKADIWSLG-ITLIEMAQIEP----------------- 220

Query: 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLF------------PSA-SDDALDLLSKM 274
                P                +    P+R L             PS  S +  D L   
Sbjct: 221 -----P----------------HHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIA 259

Query: 275 FTYDPKARITAQQALEHRYFSSAP 298
              +P+ R +A Q LEH + SS  
Sbjct: 260 LDKNPETRPSAAQLLEHPFVSSIT 283

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  154 bits (390), Expect = 2e-42
 Identities = 82/303 (27%), Positives = 122/303 (40%), Gaps = 70/303 (23%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSP 71
            Y+  + LG GT+G V       TG  VA+K +   K +   V     REI+ LK  + P
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF--------LSPADIKSYMQMTLKG 123
           HII+L        ++ +V E+        +    +F        L   + +   Q  L G
Sbjct: 77  HIIKLYQVISTPSDIFMVMEY--------VSGGELFDYICKNGRLDEKESRRLFQQILSG 128

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVF 173
           + +CH+  V+HRD+KP N+L+ +H   K+ADFGL+ +           GSP+        
Sbjct: 129 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN-------- 180

Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAA-FGTA 231
              Y APE++ G    G  VD+W++G I +A L    PF           KI    F   
Sbjct: 181 ---YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKICDGIF--- 233

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                    Y P Y+                 +   + LL  M   DP  R T +   EH
Sbjct: 234 ---------YTPQYL-----------------NPSVISLLKHMLQVDPMKRATIKDIREH 267

Query: 292 RYF 294
            +F
Sbjct: 268 EWF 270

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  151 bits (383), Expect = 2e-42
 Identities = 70/306 (22%), Positives = 117/306 (38%), Gaps = 70/306 (22%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQKEGVNFTALREIKLLKELKS 70
           DRY   + +G G +GV     D  T + VA+K I R     E V     REI   + L+ 
Sbjct: 20  DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ----REIINHRSLRH 75

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIF--------LSPADIKSYMQMTLK 122
           P+I+   +      +L ++ E+             ++         S  + + + Q  L 
Sbjct: 76  PNIVRFKEVILTPTHLAIIMEY--------ASGGELYERICNAGRFSEDEARFFFQQLLS 127

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIF----------GSPDRRFTH 170
           G+++CH   + HRD+K  N L+      +LK+ DFG ++            G+P      
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA----- 182

Query: 171 QVFARWYRAPELLFGAKQY-GAGVDVWAAGCI-FAELLNRRPFLQGSSDIDQLGKIFAAF 228
                 Y APE+L   ++Y G   DVW+ G   +  L+   PF +   +     K     
Sbjct: 183 ------YIAPEVLLR-QEYDGKIADVWSCGVTLYVMLVGAYPF-EDPEEPRDYRKTIQRI 234

Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
            +      PD   +                     S +   L+S++F  DP  RI+  + 
Sbjct: 235 LSVKY-SIPDDIRI---------------------SPECCHLISRIFVADPATRISIPEI 272

Query: 289 LEHRYF 294
             H +F
Sbjct: 273 KTHSWF 278

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  149 bits (379), Expect = 2e-42
 Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 67/317 (21%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR 60
           + E  L+K+  + +   E LGEG+YG VYKAI  +TGQ VAIK++ +    + +    ++
Sbjct: 18  LDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI----IK 73

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSY 116
           EI ++++  SPH+++   ++    +L +V E+      +D+   IR  N  L+  +I + 
Sbjct: 74  EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI---IRLRNKTLTEDEIATI 130

Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFAR 175
           +Q TLKGL + H    +HRD+K  N+L+ + G  KLADFG+  ++  +  +R T  +   
Sbjct: 131 LQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV-IGTP 189

Query: 176 WYRAPELLFGAKQYGAGVDVWAAGCIFA-ELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234
           ++ APE++     Y    D+W+ G I A E+   +P                      P 
Sbjct: 190 FWMAPEVIQE-IGYNCVADIWSLG-ITAIEMAEGKP----------------------P- 224

Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLF------------PSA-SDDALDLLSKMFTYDPKA 281
                          Y    P+R++F            P   SD+  D + +     P+ 
Sbjct: 225 ---------------YADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQ 269

Query: 282 RITAQQALEHRYFSSAP 298
           R TA Q L+H +  SA 
Sbjct: 270 RATATQLLQHPFVRSAK 286

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  148 bits (375), Expect = 8e-42
 Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 48/301 (15%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
            + + K E +G+G++G V+K ID +T + VAIK I L + ++ +     +EI +L +  S
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDS 79

Query: 71  PHIIELIDAFPHKGNLHLVFEFME----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           P++ +   ++     L ++ E++      DL   +      L    I + ++  LKGL +
Sbjct: 80  PYVTKYYGSYLKDTKLWIIMEYLGGGSALDL---LEPGP--LDETQIATILREILKGLDY 134

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFA---RWYRAPEL 182
            H +  +HRD+K  N+L+  HG++KLADFG+  ++  +  +R T   F     W  APE+
Sbjct: 135 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT---FVGTPFWM-APEV 190

Query: 183 LFGAKQYGAGVDVWAAGCIFA-ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +     Y +  D+W+ G I A EL    P     S++  +  +F       P   P    
Sbjct: 191 IKQ-SAYDSKADIWSLG-ITAIELARGEPPH---SELHPMKVLF-----LIPKNNP---- 236

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
                       P L   +   S    + +      +P  R TA++ L+H++       T
Sbjct: 237 ------------PTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 281

Query: 302 E 302
            
Sbjct: 282 S 282

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  140 bits (354), Expect = 6e-39
 Identities = 71/298 (23%), Positives = 119/298 (39%), Gaps = 41/298 (13%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELK 69
           AD       LG G YGVV K     +GQ +A+K+IR            L ++   ++ + 
Sbjct: 6   ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA-TVNSQEQKRLLMDLDISMRTVD 64

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLS--PADIKSYM-QMTLKGLAF 126
            P  +    A   +G++ +  E M+T L+   +         P DI   +    +K L  
Sbjct: 65  CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124

Query: 127 CHKKW-VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA--RWYRAPELL 183
            H K  V+HRD+KP+N+LI + GQ+K+ DFG++        +      A  + Y APE +
Sbjct: 125 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI---DAGCKPYMAPERI 181

Query: 184 FGAKQ---YGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
                   Y    D+W+ G    EL + R P+    +   QL ++               
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV--------------- 226

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
                      V  P  +      S + +D  S+    + K R T  + ++H +F+  
Sbjct: 227 -----------VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  139 bits (352), Expect = 3e-38
 Identities = 69/298 (23%), Positives = 123/298 (41%), Gaps = 37/298 (12%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELK 69
           A+       +G G YG V K +   +GQ +A+K+IR     E      L ++  +++   
Sbjct: 21  AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRS-TVDEKEQKQLLMDLDVVMRSSD 79

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLS---PADIKSYM-QMTLKGLA 125
            P+I++   A   +G+  +  E M T  +   +     L    P +I   +   T+K L 
Sbjct: 80  CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139

Query: 126 FCHKKW-VLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELL 183
              +   ++HRD+KP+N+L+   G +KL DFG+  ++  S  +        R Y APE +
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD--AGCRPYMAPERI 197

Query: 184 FGAKQ---YGAGVDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
             +     Y    DVW+ G    EL   R P+ + +S  DQL ++            P  
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV--------VKGDPPQ 249

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
             L +  E ++             S   ++ ++   T D   R   ++ L+H +    
Sbjct: 250 --LSNSEEREF-------------SPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  140 bits (354), Expect = 4e-38
 Identities = 80/369 (21%), Positives = 133/369 (36%), Gaps = 90/369 (24%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
             RY     LG G +  V+ + D +  + VA+K   + K  E    TAL EI+LLK +++
Sbjct: 36  NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK---VVKSAEHYTETALDEIRLLKSVRN 92

Query: 71  --------PHIIELIDAFPHKGN--LH--LVFEFMETDLETVI-RNTNIFLSPADIKSYM 117
                     +++L+D F   G    H  +VFE +   L   I ++    L    +K  +
Sbjct: 93  SDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKII 152

Query: 118 QMTLKGLAFCHKKW-VLHRDMKPNNLLIG------------------------------- 145
           Q  L+GL + H K  ++H D+KP N+L+                                
Sbjct: 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 212

Query: 146 ------------------SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
                                ++K+AD G A       + FT  +  R YR+ E+L G+ 
Sbjct: 213 APATAGNFLVNPLEPKNAEKLKVKIADLGNACW---VHKHFTEDIQTRQYRSLEVLIGSG 269

Query: 188 QYGAGVDVWAAGCIFAELLNRRPFLQG------SSDIDQLGKIFAAFGTATPSQWPDLAY 241
            Y    D+W+  C+  EL       +       + D D +  I    G           Y
Sbjct: 270 -YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328

Query: 242 LPDYV----EYQYVAAPPLRSLFPSA----------SDDALDLLSKMFTYDPKARITAQQ 287
             ++     + +++       LF             +    D L  M    P+ R TA +
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 388

Query: 288 ALEHRYFSS 296
            L H + +S
Sbjct: 389 CLRHPWLNS 397

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  138 bits (349), Expect = 6e-38
 Identities = 69/295 (23%), Positives = 115/295 (38%), Gaps = 36/295 (12%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELK 69
            +       +G GT G V+K    KTG  +A+K++R    KE      L ++  +LK   
Sbjct: 24  INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK-RILMDLDVVLKSHD 82

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH- 128
            P+I++    F    ++ +  E M T  E + +     +    +       +K L +   
Sbjct: 83  CPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
           K  V+HRD+KP+N+L+   GQ+KL DFG+  R+     +          Y APE +    
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK--DRSAGCAAYMAPERIDPPD 200

Query: 188 QYGAG----VDVWAAGCIFAEL-LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
                     DVW+ G    EL   + P+    +D + L K+          + P L  L
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV--------LQEEPPL--L 250

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
           P ++ +               S D    +    T D + R    + LEH +    
Sbjct: 251 PGHMGF---------------SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  135 bits (343), Expect = 6e-37
 Identities = 89/352 (25%), Positives = 133/352 (37%), Gaps = 63/352 (17%)

Query: 1   MAEVDLSKKV--ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA 58
           + E+DLS     A  +   E++G GTYG VYK    KTGQ  AIK + +   +E      
Sbjct: 11  LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEE---EI 67

Query: 59  LREIKLLKEL-KSPHIIELIDAF------PHKGNLHLVFEFME----TDLETVIRNTNIF 107
            +EI +LK+     +I     AF           L LV EF      TDL    +     
Sbjct: 68  KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT-- 125

Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL-ARIFGSPDR 166
           L    I    +  L+GL+  H+  V+HRD+K  N+L+  + ++KL DFG+ A++  +  R
Sbjct: 126 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185

Query: 167 RFTHQVFA---RWYRAPELL----FGAKQYGAGVDVWAAGCIFA-ELLNRRPFLQGSSDI 218
           R T   F     W  APE++         Y    D+W+ G I A E+    P L    D+
Sbjct: 186 RNT---FIGTPYWM-APEVIACDENPDATYDFKSDLWSLG-ITAIEMAEGAPPL---CDM 237

Query: 219 DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYD 278
             +  +F       P                    P L+S     S      +      +
Sbjct: 238 HPMRALF-----LIPRNPA----------------PRLKS--KKWSKKFQSFIESCLVKN 274

Query: 279 PKARITAQQALEHRYFSSAPLPTEPNKL-----PRPATKRASKASDFNPQEG 325
              R   +Q ++H +    P   +          R   KR  K        G
Sbjct: 275 HSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKRGEKDETEYEYSG 326

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  133 bits (335), Expect = 1e-35
 Identities = 53/316 (16%), Positives = 95/316 (30%), Gaps = 55/316 (17%)

Query: 12  DRYLKREVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
                  +LGEG +  VY+A      D K  Q   +K  +     E   +   + ++ LK
Sbjct: 65  KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWE--FYIGTQLMERLK 122

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVI----RNTNIFLSPADIKSYMQMTL 121
                  ++   A   +    LV E      L   I          +    + S+    L
Sbjct: 123 PSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRML 182

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGS-----------HGQLKLADFGLARIFGS--PDRRF 168
             +   H   ++H D+KP+N ++G+              L L D G +           F
Sbjct: 183 YMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIF 242

Query: 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228
           T +     ++  E+L   K +   +D +        +L                     F
Sbjct: 243 TAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCML---------------------F 280

Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLF-------PSASDDALDLLSKMFTYDPKA 281
           GT    +       P+ +  +          F             +LDLL +      + 
Sbjct: 281 GTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340

Query: 282 RITAQ-QALEHRYFSS 296
             T + +AL +R    
Sbjct: 341 HYTNKIRALRNRLIVL 356

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  131 bits (331), Expect = 2e-35
 Identities = 50/212 (23%), Positives = 102/212 (48%), Gaps = 26/212 (12%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           EVLG+G +G   K    +TG+ + +K++    ++    F  L+E+K+++ L+ P++++ I
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTF--LKEVKVMRCLEHPNVLKFI 73

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKWVL 133
                   L+ + E+++   L  +I++ +     +     +        G+A+ H   ++
Sbjct: 74  GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQR---VSFAKDIASGMAYLHSMNII 130

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARI---------------FGSPDRRFTHQVFARWYR 178
           HRD+  +N L+  +  + +ADFGLAR+                    +R+T      W  
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM- 189

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210
           APE++ G + Y   VDV++ G +  E++ R  
Sbjct: 190 APEMING-RSYDEKVDVFSFGIVLCEIIGRVN 220

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  130 bits (329), Expect = 6e-35
 Identities = 44/251 (17%), Positives = 85/251 (33%), Gaps = 45/251 (17%)

Query: 61  EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVI--RNTNIFLSPADIKSYM 117
           +I+ +    + + +  +     K  L++  +     +L+  +  R +             
Sbjct: 111 KIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIF 170

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------ 165
               + + F H K ++HRD+KP+N+       +K+ DFGL       +            
Sbjct: 171 IQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230

Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIF 225
              T QV  + Y +PE + G   Y   VD+++ G I  ELL    F      +  +  + 
Sbjct: 231 ATHTGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLY--SFSTQMERVRIITDV- 286

Query: 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA 285
                                  ++   P    LF         ++  M +  P  R  A
Sbjct: 287 --------------------RNLKF---PL---LFTQKYPQEHMMVQDMLSPSPTERPEA 320

Query: 286 QQALEHRYFSS 296
              +E+  F +
Sbjct: 321 TDIIENAIFEN 331

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 68.4 bits (167), Expect = 5e-13
 Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 2/139 (1%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           + +    +   + +G G +GVV++A +       AIK+IRL   +E      +RE+K L 
Sbjct: 1   ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRL-PNRELAREKVMREVKALA 59

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT-LKGLA 125
           +L+ P I+   +A+          E  E  L+    +  +          +++  +   +
Sbjct: 60  KLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS 119

Query: 126 FCHKKWVLHRDMKPNNLLI 144
             +    L        L I
Sbjct: 120 TKNTVGQLQPSSPKVYLYI 138

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  124 bits (313), Expect = 5e-33
 Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 42/220 (19%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-----REIKLLKELKSPH 72
           + +G+G +G+V+K    K    VAIK + LG  +             RE+ ++  L  P+
Sbjct: 25  KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCH 128
           I++L           +V EF+   DL   + +    +  +     +++ L    G+ +  
Sbjct: 85  IVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK---LRLMLDIALGIEYMQ 139

Query: 129 --KKWVLHRDMKPNNLLIGSHGQ-----LKLADFGLARIF--------GSPDRRFTHQVF 173
                ++HRD++  N+ + S  +      K+ADFGL++          G+          
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNF--------- 190

Query: 174 ARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELL-NRRPF 211
            +W  APE +    + Y    D ++   I   +L    PF
Sbjct: 191 -QW-MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  123 bits (312), Expect = 1e-32
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 24/204 (11%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           EV+G G +GVV KA      + VAIK+I    +++   F  + E++ L  +  P+I++L 
Sbjct: 14  EVVGRGAFGVVCKA--KWRAKDVAIKQIESESERK--AF--IVELRQLSRVNHPNIVKLY 67

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHK---K 130
            A  +   + LV E+ E   L  V+      L        M   L   +G+A+ H    K
Sbjct: 68  GACLN--PVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124

Query: 131 WVLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFTHQVF-ARWYRAPELLFGAKQ 188
            ++HRD+KP NLL+ + G  LK+ DFG A    +     T+    A W  APE+  G   
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---HMTNNKGSAAW-MAPEVFEG-SN 179

Query: 189 YGAGVDVWAAGCIFAELLNRR-PF 211
           Y    DV++ G I  E++ RR PF
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPF 203

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  123 bits (311), Expect = 1e-32
 Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 13/202 (6%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E +G G++G V++A     G  VA+K +             LRE+ ++K L+ P+I+  +
Sbjct: 43  EKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100

Query: 78  DAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKK--W 131
            A     NL +V E++    L  ++  +       D +  + M     KG+ + H +   
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNRNPP 159

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV-FARWYRAPELLFGAKQYG 190
           ++HR++K  NLL+     +K+ DFGL+R+  S             W  APE+L   +   
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEW-MAPEVLRD-EPSN 217

Query: 191 AGVDVWAAGCIFAELLNRR-PF 211
              DV++ G I  EL   + P+
Sbjct: 218 EKSDVYSFGVILWELATLQQPW 239

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  121 bits (306), Expect = 5e-32
 Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 14/218 (6%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + +G G++G VYK    K    VA+K + +             E+ +L++ +  +I+  +
Sbjct: 30  QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                   L +V ++ E   L   +  +        +    + T +G+ + H K ++HRD
Sbjct: 87  GYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR--APELLFG--AKQYGAG 192
           +K NN+ +     +K+ DFGLA            +  +      APE++    +  Y   
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205

Query: 193 VDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFG 229
            DV+A G +  EL+  + P+    S+I+   +I    G
Sbjct: 206 SDVYAFGIVLYELMTGQLPY----SNINNRDQIIEMVG 239

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  123 bits (311), Expect = 6e-32
 Identities = 73/364 (20%), Positives = 142/364 (39%), Gaps = 64/364 (17%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELKSPHIIEL 76
            +G+G++G V       T +  A+K +   K  ++  V     +E+++++ L+ P ++ L
Sbjct: 22  AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV-FKELQIMQGLEHPFLVNL 80

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYM-QMTLKGLAFCHKKWVLH 134
             +F  + ++ +V + +   DL   ++    F     +K ++ ++ +  L +   + ++H
Sbjct: 81  WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHF-KEETVKLFICELVM-ALDYLQNQRIIH 138

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF----------GSPDRRFTHQVFARWYRAPELLF 184
           RDMKP+N+L+  HG + + DF +A +           G+             Y APE+  
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKP-----------YMAPEMFS 187

Query: 185 --GAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
                 Y   VD W+ G    ELL  RRP+   SS      +I   F T   +       
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--TSSKEIVHTFETTVVT------- 238

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-TAQQALEHRYFSSAPLP 300
            P                    S + + LL K+   +P  R           Y +     
Sbjct: 239 YPSAW-----------------SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWD 281

Query: 301 TEPNKLPRPATKRASKASDFNPQ---EGPTVLSPP---RKTRRVMPDREGFEGNANRTDK 354
               K   P         + +P    E   + S P   +K R    +++  + ++++T  
Sbjct: 282 AVFQKRLIPGFIPNKGRLNCDPTFELEEMILESKPLHKKKKRLAKKEKDMRKCDSSQTCL 341

Query: 355 IEEH 358
           ++EH
Sbjct: 342 LQEH 345

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  122 bits (307), Expect = 7e-32
 Identities = 66/305 (21%), Positives = 121/305 (39%), Gaps = 55/305 (18%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + +G+G YG V+       G+ VA+K     ++     +    EI     ++  +I+  I
Sbjct: 43  KQIGKGRYGEVWMG--KWRGEKVAVKVFFTTEEAS---WFRETEIYQTVLMRHENILGFI 97

Query: 78  DA----FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCH- 128
            A          L+L+ ++ E   L   +++T +     D KS +++      GL   H 
Sbjct: 98  AADIKGTGSWTQLYLITDYHENGSLYDYLKSTTL-----DAKSMLKLAYSSVSGLCHLHT 152

Query: 129 -------KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWY 177
                  K  + HRD+K  N+L+  +G   +AD GLA  F       D     +V  + Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212

Query: 178 RAPELLFGA-----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT 232
             PE+L  +      Q     D+++ G I  E+  RR    G  +  QL      +    
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA-RRCVSGGIVEEYQL-----PYHDLV 266

Query: 233 PSQWPDLAYLPDYVEYQYVAA-----PPLRSLFPSASDDAL--DLLSKMFTYDPKARITA 285
           PS        P Y + + +       P   + + S         L+++ + ++P +R+TA
Sbjct: 267 PSD-------PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTA 319

Query: 286 QQALE 290
            +  +
Sbjct: 320 LRVKK 324

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  119 bits (301), Expect = 2e-31
 Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 30/213 (14%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKELKSPHIIE 75
           E++G G +G VY+A     G  VA+K  R    ++         +E KL   LK P+II 
Sbjct: 13  EIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKK- 130
           L      + NL LV EF     L  V+    I          +   +   +G+ + H + 
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI-----PPDILVNWAVQIARGMNYLHDEA 125

Query: 131 --WVLHRDMKPNNLLIG--------SHGQLKLADFGLARIFGSPDRRFTHQVF-ARWYRA 179
              ++HRD+K +N+LI         S+  LK+ DFGLAR +    +          W  A
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAW-MA 182

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRR-PF 211
           PE++     +  G DVW+ G +  ELL    PF
Sbjct: 183 PEVIRA-SMFSKGSDVWSYGVLLWELLTGEVPF 214

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  120 bits (303), Expect = 2e-31
 Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 19/209 (9%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E++G+G +G VY     +    VAI+ I + +  E       RE+   ++ +  +++  +
Sbjct: 39  ELIGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
            A     +L ++    +   L +V+R+  I L     +   Q  +KG+ + H K +LH+D
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKD 155

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFG---SPDRRFTHQVFARWYR--APELL-------- 183
           +K  N+    +G++ + DFGL  I G   +  R    ++   W    APE++        
Sbjct: 156 LKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRR-PF 211
                +    DV+A G I+ EL  R  PF
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHAREWPF 243

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  118 bits (299), Expect = 3e-31
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 24/207 (11%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
             L E   G ++K      G  + +K +++       +     E   L+    P+++ ++
Sbjct: 16  TKLNENHSGELWKG--RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVL 73

Query: 78  DAF--PHKGNLHLVFEFMET-DLETVIR-NTNIFLSPADIKSYMQMTL---KGLAFCH-- 128
            A   P   +  L+  +M    L  V+   TN  +  +     ++  L   +G+AF H  
Sbjct: 74  GACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQA---VKFALDMARGMAFLHTL 130

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
           +  +    +   +++I      +++   +   F SP R +       W  APE L   K 
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYA----PAWV-APEALQK-KP 184

Query: 189 YGAG---VDVWAAGCIFAELLNRR-PF 211
                   D+W+   +  EL+ R  PF
Sbjct: 185 EDTNRRSADMWSFAVLLWELVTREVPF 211

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  119 bits (300), Expect = 4e-31
 Identities = 72/307 (23%), Positives = 122/307 (39%), Gaps = 59/307 (19%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E +G+G YG V++   +  G+ VA+K      +K    +    E+     L+  +I+  I
Sbjct: 14  ECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFI 68

Query: 78  DA----FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCH- 128
            +          L L+  + E   L   ++ T +     D  S +++ L    GLA  H 
Sbjct: 69  ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTL-----DTVSCLRIVLSIASGLAHLHI 123

Query: 129 -------KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWY 177
                  K  + HRD+K  N+L+  +GQ  +AD GLA +        D     +V  + Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183

Query: 178 RAPELL-----FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT 232
            APE+L              VD+WA G +  E+  RR    G  +  +       F    
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA-RRMVSNGIVEDYKP-----PFYDVV 237

Query: 233 PSQWPDLAYLPDYVEYQYVAA-----PPLRSLFPSASDDALDLLSKMFT----YDPKARI 283
           P+        P + + + V       P + + +   SD  L  L+K+       +P AR+
Sbjct: 238 PND-------PSFEDMRKVVCVDQQRPNIPNRWF--SDPTLTSLAKLMKECWYQNPSARL 288

Query: 284 TAQQALE 290
           TA +  +
Sbjct: 289 TALRIKK 295

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  117 bits (296), Expect = 3e-30
 Identities = 66/308 (21%), Positives = 119/308 (38%), Gaps = 61/308 (19%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E +G+G +G V++      G+ VA+K     +++    +    EI     L+  +I+  I
Sbjct: 48  ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFI 102

Query: 78  DAFPHKGNLH----LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHK 129
            A            LV ++ E   L   +    +      ++  +++ L    GLA  H 
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV-----TVEGMIKLALSTASGLAHLHM 157

Query: 130 KW--------VLHRDMKPNNLLIGSHGQLKLADFGLARIF----GSPDRRFTHQVFARWY 177
           +         + HRD+K  N+L+  +G   +AD GLA        + D    H+V  + Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217

Query: 178 RAPELLFGA-----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT 232
            APE+L  +      +     D++A G +F E+  R                 +  G   
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR----------------CSIGGIHE 261

Query: 233 PSQWPDLAYLPDYVE----YQYVAAPPLRSLFPSA--SDDALDLLSKMFT----YDPKAR 282
             Q P    +P         + V    LR   P+   S +AL +++K+       +  AR
Sbjct: 262 DYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 321

Query: 283 ITAQQALE 290
           +TA +  +
Sbjct: 322 LTALRIKK 329

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  116 bits (293), Expect = 6e-30
 Identities = 75/331 (22%), Positives = 121/331 (36%), Gaps = 60/331 (18%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E++G G YG VYK   +   + VA+K      ++    F   + I  +  ++  +I   I
Sbjct: 19  ELIGRGRYGAVYKG--SLDERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFI 73

Query: 78  DA-----FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCH 128
                     +    LV E+     L   +          D  S  ++     +GLA+ H
Sbjct: 74  VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLH 128

Query: 129 ---------KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--------GSPDRRFTHQ 171
                    K  + HRD+   N+L+ + G   ++DFGL+           G  D     +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188

Query: 172 VFARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIF 225
           V    Y APE+L GA      +     VD++A G I+ E+  R   L     + +     
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ--- 245

Query: 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFT-------YD 278
            AF T   +  P    +   V  +       R  FP A  +    +  +          D
Sbjct: 246 MAFQTEVGNH-PTFEDMQVLVSREK-----QRPKFPEAWKENSLAVRSLKETIEDCWDQD 299

Query: 279 PKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
            +AR+TAQ A E    +   +  E NK   P
Sbjct: 300 AEARLTAQXAEE--RMAELMMIWERNKSVSP 328

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  115 bits (290), Expect = 2e-29
 Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 47/301 (15%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           EV   G +G V+KA      + VA+K   +  ++    +    E+  L  +K  +I++ I
Sbjct: 30  EVKARGRFGCVWKA--QLLNEYVAVKIFPIQDKQS---WQNEYEVYSLPGMKHENILQFI 84

Query: 78  DAFPHKGNLH----LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCH- 128
            A     ++     L+  F E   L   ++   +            +     +GLA+ H 
Sbjct: 85  GAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVV-----SWNELCHIAETMARGLAYLHE 139

Query: 129 ---------KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWY 177
                    K  + HRD+K  N+L+ ++    +ADFGLA  F  G        QV  R Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199

Query: 178 RAPELLFGA----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233
            APE+L GA    +     +D++A G +  EL +R     G  D   L      F     
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML-----PFEEEIG 254

Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFT----YDPKARITAQQAL 289
              P L  + + V ++    P LR  +       + +L +       +D +AR++A    
Sbjct: 255 QH-PSLEDMQEVVVHK-KKRPVLRDYWQ--KHAGMAMLCETIEECWDHDAEARLSAGCVG 310

Query: 290 E 290
           E
Sbjct: 311 E 311

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  114 bits (288), Expect = 3e-29
 Identities = 66/298 (22%), Positives = 112/298 (37%), Gaps = 60/298 (20%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
           +LGEG++  V  A +  T +  AIK   K  + K+ + V +   RE  ++  L  P  ++
Sbjct: 37  ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK-VPYV-TRERDVMSRLDHPFFVK 94

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYM-QMTLKGLAFCHKKWVL 133
           L   F     L+    + +  +L   IR    F      + Y  ++    L + H K ++
Sbjct: 95  LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVS-ALEYLHGKGII 152

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-------YRAPELLFGA 186
           HRD+KP N+L+     +++ DFG A++     ++                Y +PELL   
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-----ANSFVGTAQYVSPELLTE- 206

Query: 187 KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
           K      D+WA GCI  +L+    PF   + +   +                        
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFR--AGNEYLI------------------------ 240

Query: 246 VEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARIT------AQQALEHRYFSS 296
             +Q +        FP      A DL+ K+   D   R+             H +F S
Sbjct: 241 --FQKIIKLEYD--FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  112 bits (283), Expect = 1e-28
 Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 10/210 (4%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLL 65
           K + +RY   + LG G    VY A DT     VAIK I +  +++         RE+   
Sbjct: 7   KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK-EETLKRFEREVHNS 65

Query: 66  KELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
            +L   +I+ +ID        +LV E++E   L   I +    LS     ++    L G+
Sbjct: 66  SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-LSVDTAINFTNQILDGI 124

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF--ARWYRAPEL 182
              H   ++HRD+KP N+LI S+  LK+ DFG+A+         T+ V    + Y +PE 
Sbjct: 125 KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ-YFSPEQ 183

Query: 183 LFGAKQYGAGVDVWAAGCIFAELL-NRRPF 211
             G +      D+++ G +  E+L    PF
Sbjct: 184 AKG-EATDECTDIYSIGIVLYEMLVGEPPF 212

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  113 bits (284), Expect = 1e-28
 Identities = 51/208 (24%), Positives = 81/208 (38%), Gaps = 8/208 (3%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLLK 66
                Y  R ++G G  G VY+A DT   + VA+K +      +   F     RE +   
Sbjct: 31  TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD-PVFRTRMQREARTAG 89

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
            L+ PH++ + D     G L++    +   DL  ++R     L+P    + ++     L 
Sbjct: 90  RLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGP-LAPPRAVAIVRQIGSALD 148

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-YRAPELLF 184
             H     HRD+KP N+L+ +     L DFG+A                   Y APE   
Sbjct: 149 AAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFS 208

Query: 185 GAKQYGAGVDVWAAGCIFAELL-NRRPF 211
                    D++A  C+  E L    P+
Sbjct: 209 E-SHATYRADIYALTCVLYECLTGSPPY 235

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  114 bits (286), Expect = 7e-28
 Identities = 89/409 (21%), Positives = 151/409 (36%), Gaps = 75/409 (18%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLG--KQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG+G +G V       TG+  A KK+     K+++G     L E ++L+++ S  ++ L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVNSRFVVSL 249

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
             A+  K  L LV   M   DL+  I +        A    Y      GL   H++ +++
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309

Query: 135 RDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRF--THQVFARWYRAPELLFGAKQYG 190
           RD+KP N+L+  HG ++++D GLA     G   +    T       Y APE++   ++Y 
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG-----YMAPEVVKN-ERYT 363

Query: 191 AGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              D WA GC+  E++  + PF Q      +  ++                   +     
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPF-QQRKKKIKREEVERLVKEVPEE-------YSERF--- 412

Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS-------A 297
                         S  A  L S++   DP  R+     +A++  EH  F         A
Sbjct: 413 --------------SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGA 458

Query: 298 PLPTEPNKLPRPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGFEG-------N 348
            +   P K P P         D           L P         D++ ++         
Sbjct: 459 GMLEPPFK-PDPQAIYCKDVLDIEQFSTVKGVELEP--------TDQDFYQKFATGSVPI 509

Query: 349 ANRTDKIEEHAGETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTINR 397
             + + +E    +  N  G     +  VP  +D+      PP +  + R
Sbjct: 510 PWQNEMVETECFQELNVFGL----DGSVPPDLDWKGQPPAPPKKGLLQR 554

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  114 bits (286), Expect = 1e-27
 Identities = 72/307 (23%), Positives = 121/307 (39%), Gaps = 66/307 (21%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG--KQKEGVNFTALREIKLLKELKS 70
              +  ++G G +G VY      TG+  A+K +     K K+G     L E  +L  + +
Sbjct: 192 SVHR--IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA-LNERIMLSLVST 248

Query: 71  ---PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
              P I+ +  AF     L  + + M   DL   +    +F S AD++ Y    + GL  
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEH 307

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF---------GSPDRRFTHQVFARWY 177
            H ++V++RD+KP N+L+  HG ++++D GLA  F         G+             Y
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG-----------Y 356

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQ-GSSDIDQLGKIFAAFGTATPSQ 235
            APE+L     Y +  D ++ GC+  +LL    PF Q  + D  ++              
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-------------- 402

Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARI-----TAQQAL 289
                        +      +    P + S +   LL  +   D   R+      AQ+  
Sbjct: 403 ------------DRMTLTMAVE--LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448

Query: 290 EHRYFSS 296
           E  +F S
Sbjct: 449 ESPFFRS 455

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score =  108 bits (271), Expect = 6e-27
 Identities = 60/341 (17%), Positives = 91/341 (26%), Gaps = 84/341 (24%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN------FTALREIKLL 65
           ++  + E +GEG +G V++ I   T   VAIK I +                 L EI + 
Sbjct: 20  EKLQRCEKIGEGVFGEVFQTIADHT--PVAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77

Query: 66  KEL---------KSPHIIELIDAFPHKG------------------------------NL 86
           KEL         ++   I L      +G                               L
Sbjct: 78  KELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQL 137

Query: 87  HLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW-VLHRDMKPNNLL 143
            +V EF     DLE +        S A  KS +      LA         HRD+   N+L
Sbjct: 138 FIVLEFEFGGIDLEQMRTK---LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVL 194

Query: 144 IGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFA 203
           +      KL      +    P      QV    Y    L                  +F 
Sbjct: 195 LKKTSLKKLHYTLNGKSSTIPS--CGLQVSIIDYTLSRLE------------RDGIVVFC 240

Query: 204 ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD---------LAYLPDY-VEYQYVAA 253
           ++        G  D D    I+        ++W +         L YL D  ++      
Sbjct: 241 DVSMDEDLFTG--DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT 298

Query: 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                          +    M  +      +A   L     
Sbjct: 299 KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSL 334

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  106 bits (268), Expect = 2e-26
 Identities = 81/351 (23%), Positives = 131/351 (37%), Gaps = 66/351 (18%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLL 65
             ++DRY   E+LG G    V+ A D +  + VA+K +R    ++  +F     RE +  
Sbjct: 8   SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD-PSFYLRFRREAQNA 66

Query: 66  KELKSPHIIELID---AFPHKGNLH-LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMT 120
             L  P I+ + D   A    G L  +V E+++   L  ++      ++P      +   
Sbjct: 67  AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADA 125

Query: 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH--------QV 172
            + L F H+  ++HRD+KP N++I +   +K+ DFG+AR         T         Q 
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ- 184

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231
               Y +PE   G     A  DV++ GC+  E+L    PF  G S               
Sbjct: 185 ----YLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPF-TGDS--------------- 223

Query: 232 TPSQWPDLAYLPDYVEYQYV--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289
                      P  V YQ+V     P  +     S D   ++ K    +P          
Sbjct: 224 -----------PVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP---------- 262

Query: 290 EHRYFSSAPLPTEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMP 340
           E+RY ++A +  +   L R       +A         T L          P
Sbjct: 263 ENRYQTAAEMRAD---LVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGP 310

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  110 bits (276), Expect = 2e-26
 Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 36/223 (16%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           VA +Y  +  +  G  G +Y A+D    G+ V +K +      E     A+ E + L E+
Sbjct: 78  VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQA-MAMAERQFLAEV 136

Query: 69  KSPHIIELIDAFPHKGN-----LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLK 122
             P I+++ +   H         ++V E++    L+         L  A+  +Y+   L 
Sbjct: 137 VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---LPVAEAIAYLLEILP 193

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR-------IFGSPDRRFTHQVFAR 175
            L++ H   +++ D+KP N+++ +  QLKL D G          ++G+P           
Sbjct: 194 ALSYLHSIGLVYNDLKPENIML-TEEQLKLIDLGAVSRINSFGYLYGTPG---------- 242

Query: 176 WYRAPELLFGAKQYGAGV--DVWAAGCIFAELLNRRPFLQGSS 216
            ++APE++      G  V  D++  G   A L    P   G  
Sbjct: 243 -FQAPEIVRT----GPTVATDIYTVGRTLAALTLDLPTRNGRY 280

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  109 bits (273), Expect = 4e-26
 Identities = 84/384 (21%), Positives = 138/384 (35%), Gaps = 80/384 (20%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLG--KQKEGVNFTALREIKLLKELKSPHIIEL 76
           VLG G +G V+      TG+  A KK+     K+++G     + E K+L ++ S  I+ L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVEKKILAKVHSRFIVSL 250

Query: 77  IDAFPHKGNLHLVFEFME-----TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
             AF  K +L LV   M        +  V  +   F        Y    + GL   H++ 
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAIFYTAQIVSGLEHLHQRN 309

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---F--THQVFARWYRAPELLFGA 186
           +++RD+KP N+L+   G ++++D GLA    +   +   +  T       + APELL G 
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG-----FMAPELLLG- 363

Query: 187 KQYGAGVDVWAAGCIFAELLN-RRPFLQ--GSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
           ++Y   VD +A G    E++  R PF       +  +L                      
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL---------------------- 401

Query: 244 DYVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS- 296
                Q V    +   +P   S  + D    +   DP+ R+     +      H  F   
Sbjct: 402 ----KQRVLEQAVT--YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455

Query: 297 -----APLPTEPNKLPRPATKRASKASD---FNPQEGP-------------TVLSPPRKT 335
                      P  +P   T  A    D   F+  +G                 + P   
Sbjct: 456 SWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQEFASGTCPIPW 515

Query: 336 RRVMPDREGFEG-NANRTDKIEEH 358
           +  M +   F   N  R D ++ H
Sbjct: 516 QEEMIETGVFGDLNVWRPDGVDHH 539

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  106 bits (267), Expect = 1e-25
 Identities = 69/301 (22%), Positives = 114/301 (37%), Gaps = 60/301 (19%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKELKSPHIIE 75
           V+G G +G V         +  A+K +    + K+ E   F   R++  L    S  I  
Sbjct: 81  VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV--LVNGDSKWITT 138

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L  AF    NL+LV ++    DL T++      L     + Y+   +  +   H+   +H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF------------GSPDRRFTHQVFARWYRAPEL 182
           RD+KP+N+L+  +G ++LADFG                 G+PD           Y +PE+
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD-----------YISPEI 247

Query: 183 L----FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           L     G  +YG   D W+ G    E+L         S ++  GKI             +
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM---------NHKE 298

Query: 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE---HRYFS 295
               P  V                 S++A DL+ ++     + R+      +   H +FS
Sbjct: 299 RFQFPTQV--------------TDVSENAKDLIRRLIC-SREHRLGQNGIEDFKKHPFFS 343

Query: 296 S 296
            
Sbjct: 344 G 344

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  104 bits (263), Expect = 1e-25
 Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 66/298 (22%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            LG G++G V+       G+  A+K   K  + + K+ V  T   E  +L  +  P II 
Sbjct: 13  TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ-VEHT-NDERLMLSIVTHPFIIR 70

Query: 76  LIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYM-QMTLKGLAFCHKKWVL 133
           +   F     + ++ +++E  +L +++R +  F      K Y  ++ L  L + H K ++
Sbjct: 71  MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF-PNPVAKFYAAEVCL-ALEYLHSKDII 128

Query: 134 HRDMKPNNLLIGSHGQLKLADFGLARIF--------GSPDRRFTHQVFARWYRAPELLFG 185
           +RD+KP N+L+  +G +K+ DFG A+          G+PD           Y APE++  
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPD-----------YIAPEVVST 177

Query: 186 AKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
            K Y   +D W+ G +  E+L    PF    S+  +                        
Sbjct: 178 -KPYNKSIDWWSFGILIYEMLAGYTPFY--DSNTMKT----------------------- 211

Query: 245 YVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
              Y+ +    LR  FP   ++D  DLLS++ T D   R+       +    H +F  
Sbjct: 212 ---YEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  104 bits (261), Expect = 3e-25
 Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIK---KIRLGKQKEGVNFTALREIKLLKELKSPHIIE 75
            LG G++G V      ++G   A+K   K ++ K K+ +  T L E ++L+ +  P +++
Sbjct: 48  TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEHT-LNEKRILQAVNFPFLVK 105

Query: 76  LIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L  +F    NL++V E++   ++ + +R    F S    + Y    +    + H   +++
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLHSLDLIY 164

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF--------GSPDRRFTHQVFARWYRAPELLFGA 186
           RD+KP NLLI   G +++ DFG A+          G+P+             APE++   
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----------ALAPEIILS- 212

Query: 187 KQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
           K Y   VD WA G +  E+     PF   +    Q+                        
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFF--ADQPIQI------------------------ 246

Query: 246 VEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARITAQQA-----LEHRYFSS 296
             Y+ + +  +R  FPS  S D  DLL  +   D   R    +        H++F++
Sbjct: 247 --YEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  102 bits (257), Expect = 4e-25
 Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 20/227 (8%)

Query: 13  RYLK-REVLGEGTYGVVYKA----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           R+LK  + LG+G +G V       +   TG+ VA+KK++   ++   +F   REI++LK 
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF--EREIEILKS 67

Query: 68  LKSPHIIELIDA--FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L+  +I++         + NL L+ E++    L   ++     +    +  Y     KG+
Sbjct: 68  LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAP 180
            +   K  +HRD+   N+L+ +  ++K+ DFGL ++       F  +        WY AP
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-AP 186

Query: 181 E-LLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSSDIDQLGKI 224
           E L     ++    DVW+ G +  EL     +     +  +  +G  
Sbjct: 187 ESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  103 bits (259), Expect = 4e-25
 Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 20/227 (8%)

Query: 13  RYLK-REVLGEGTYGVVYKA----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           R+LK  + LG+G +G V       +   TG+ VA+KK++   ++   +F   REI++LK 
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF--EREIEILKS 98

Query: 68  LKSPHIIELIDA--FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L+  +I++         + NL L+ E++    L   ++     +    +  Y     KG+
Sbjct: 99  LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 158

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAP 180
            +   K  +HRD+   N+L+ +  ++K+ DFGL ++       +  +        WY AP
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-AP 217

Query: 181 E-LLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSSDIDQLGKI 224
           E L     ++    DVW+ G +  EL     +     +  +  +G  
Sbjct: 218 ESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 262

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  104 bits (261), Expect = 6e-25
 Identities = 69/305 (22%), Positives = 115/305 (37%), Gaps = 66/305 (21%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKELKSPHIIE 75
           V+G G +  V      +TGQ  A+K +    + K+ E   F   R++  L       I +
Sbjct: 68  VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV--LVNGDRRWITQ 125

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L  AF  +  L+LV E+    DL T++      +     + Y+   +  +   H+   +H
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIF------------GSPDRRFTHQVFARWYRAPEL 182
           RD+KP+N+L+   G ++LADFG                 G+PD           Y +PE+
Sbjct: 186 RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPD-----------YLSPEI 234

Query: 183 L------FGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQL-GKIFAAFGTATPS 234
           L       G   YG   D WA G    E+   + PF   +    +  GKI          
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY--ADSTAETYGKIV--------- 283

Query: 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE---H 291
            + +   LP                     ++A D + ++    P+ R+    A +   H
Sbjct: 284 HYKEHLSLPLVD--------------EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328

Query: 292 RYFSS 296
            +F  
Sbjct: 329 PFFFG 333

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 99.8 bits (249), Expect = 4e-24
 Identities = 42/310 (13%), Positives = 76/310 (24%), Gaps = 58/310 (18%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA--LREIKLLKE 67
              RY      G       ++A+DT   + VA+  +         +     L     L  
Sbjct: 29  ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQ-GVLPDDVLQETLSRTLRLSR 87

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           +  P +  ++D    +    +V E++    L+ V   +    SP      MQ        
Sbjct: 88  IDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADA 144

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
            H+  V      P+ + +   G + LA                                 
Sbjct: 145 AHRAGVALSIDHPSRVRVSIDGDVVLAYPA--------------------TMPDA----- 179

Query: 187 KQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
                  D+   G     LL NR P  +                +       D A  P  
Sbjct: 180 ---NPQDDIRGIGASLYALLVNRWPLPEAGVR------------SGLAPAERDTAGQP-- 222

Query: 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNK 305
                        +          + ++    D   R  +      +  ++    TE   
Sbjct: 223 --------IEPADIDRDIPFQISAVAARSVQGDGGIRSASTLLNLMQQATAVADRTEVLG 274

Query: 306 LPRPATKRAS 315
               A   A+
Sbjct: 275 PIDEAPVSAA 284

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =   99 bits (250), Expect = 1e-23
 Identities = 86/361 (23%), Positives = 144/361 (39%), Gaps = 74/361 (20%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG--KQKEGVNFT-ALREIKLLKELK 69
              K  +LG+G++G V+ A   KT Q  AIK ++       + V  T   + + L    +
Sbjct: 20  ILHK--MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV-LSLAWE 76

Query: 70  SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            P +  +   F  K NL  V E++   DL   I++ + F        Y    + GL F H
Sbjct: 77  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-RATFYAAEIILGLQFLH 135

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-----------GSPDRRFTHQVFARWY 177
            K +++RD+K +N+L+   G +K+ADFG+ +             G+PD           Y
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPD-----------Y 184

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
            APE+L G ++Y   VD W+ G +  E+L  + PF     D ++L               
Sbjct: 185 IAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFH--GQDEEEL--------------- 226

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARITAQQAL-EHRYF 294
                      +  +        +P     +A DLL K+F  +P+ R+  +  + +H  F
Sbjct: 227 -----------FHSIRMDNPF--YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF 273

Query: 295 SS---APLPTEPNKLP---RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGFE 346
                  L  E  ++    RP  K     S+F+ +       LS   +      D+  F 
Sbjct: 274 REINWEEL--ERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFR 331

Query: 347 G 347
            
Sbjct: 332 N 332

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 99.3 bits (248), Expect = 2e-23
 Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 67/306 (21%)

Query: 19  VLGEGTYGVVY---KAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREIKLLKELKSP 71
           VLG G YG V+   K     TG+  A+K ++    + K K   +    R++ L    +SP
Sbjct: 61  VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV-LEHIRQSP 119

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYM-QMTLKGLAFCHK 129
            ++ L  AF  +  LHL+ +++   +L T +     F +  +++ Y+ ++ L  L   HK
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF-TEHEVQIYVGEIVL-ALEHLHK 177

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF------------GSPDRRFTHQVFARWY 177
             +++RD+K  N+L+ S+G + L DFGL++ F            G+ +           Y
Sbjct: 178 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE-----------Y 226

Query: 178 RAPELLFGAKQ-YGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235
            AP+++ G    +   VD W+ G +  ELL    PF        Q  +I      + P  
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ-AEISRRILKSEPP- 284

Query: 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALE 290
                  P  +                 S  A DL+ ++   DPK R+      A +  E
Sbjct: 285 ------YPQEM-----------------SALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321

Query: 291 HRYFSS 296
           H +F  
Sbjct: 322 HLFFQK 327

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 99.3 bits (248), Expect = 2e-23
 Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 11/188 (5%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLKELKSPHIIEL 76
           E +G G +G V+          VA+K  R     +    F  L+E ++LK+   P+I+ L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKF--LQEARILKQYSHPNIVRL 177

Query: 77  IDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
           I     K  +++V E ++  D  T +R     L    +   +     G+ +   K  +HR
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPD---RRFTHQVFARWYRAPE-LLFGAKQYGA 191
           D+   N L+     LK++DFG++R              QV  +W  APE L +G  +Y +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT-APEALNYG--RYSS 294

Query: 192 GVDVWAAG 199
             DVW+ G
Sbjct: 295 ESDVWSFG 302

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 98.6 bits (246), Expect = 2e-23
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 18/207 (8%)

Query: 13  RYLK-REVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           R+LK    LG+G +G V           TG  VA+K+++     +  +F   REI++LK 
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF--QREIQILKA 80

Query: 68  LKSPHIIELID--AFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
           L S  I++       P + +L LV E++ +  L   ++     L  + +  Y     KG+
Sbjct: 81  LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAP 180
            +   +  +HRD+   N+L+ S   +K+ADFGLA++       +  +        WY AP
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-AP 199

Query: 181 E-LLFGAKQYGAGVDVWAAGCIFAELL 206
           E L      +    DVW+ G +  EL 
Sbjct: 200 ESLSDN--IFSRQSDVWSFGVVLYELF 224

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  100 bits (249), Expect = 5e-23
 Identities = 88/359 (24%), Positives = 144/359 (40%), Gaps = 77/359 (21%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLG--KQKEGVNFT-ALREIKLLKELKSPHIIE 75
           VLG+G++G V  +    T +  A+K ++     Q + V  T   + + L    K P + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV-LALPGKPPFLTQ 406

Query: 76  LIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L   F     L+ V E++   DL   I+    F  P     Y      GL F   K +++
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP-HAVFYAAEIAIGLFFLQSKGIIY 465

Query: 135 RDMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWYRAPELL 183
           RD+K +N+++ S G +K+ADFG+           + F G+PD           Y APE++
Sbjct: 466 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPD-----------YIAPEII 514

Query: 184 FGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
              + YG  VD WA G +  E+L  + PF     D D+L                     
Sbjct: 515 AY-QPYGKSVDWWAFGVLLYEMLAGQAPFE--GEDEDEL--------------------- 550

Query: 243 PDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
                +Q +    +   +P S S +A+ +   + T  P  R+       +   EH +F  
Sbjct: 551 -----FQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603

Query: 297 ---APLPTEPNKLP---RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGFEG 347
                L  E  ++    +P       A +F+      P VL+PP +      D+  FEG
Sbjct: 604 IDWEKL--ERKEIQPPYKP-KASGRNAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFEG 659

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 98.6 bits (246), Expect = 6e-23
 Identities = 73/317 (23%), Positives = 119/317 (37%), Gaps = 62/317 (19%)

Query: 5   DLSKKVADRYLKRE------VLGEGTYGVVYKAIDTKTGQTVAIKKIR---LGKQKEGVN 55
           D   K+ D  +K E      V+G G +G V       T +  A+K +    + K+ +   
Sbjct: 56  DTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 115

Query: 56  FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIK 114
           F   R+I  +    SP +++L  AF     L++V E+M   DL  ++ N ++       +
Sbjct: 116 FWEERDI--MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWAR 171

Query: 115 SYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174
            Y    +  L   H    +HRD+KP+N+L+   G LKLADFG                  
Sbjct: 172 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC----- 226

Query: 175 RW-------YRAPELLF---GAKQYGAGVDVWAAG-CIFAELLNRRPFLQGSSDIDQL-G 222
                    Y +PE+L    G   YG   D W+ G  ++  L+   PF   +  +     
Sbjct: 227 -DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY--ADSLVGTYS 283

Query: 223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282
           KI           +PD   +                     S +A +L+    T D + R
Sbjct: 284 KIMNH---KNSLTFPDDNDI---------------------SKEAKNLICAFLT-DREVR 318

Query: 283 ITAQQALE---HRYFSS 296
           +      E   H +F +
Sbjct: 319 LGRNGVEEIKRHLFFKN 335

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 97.2 bits (243), Expect = 7e-23
 Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 69/302 (22%)

Query: 19  VLGEGTYGVVY---KAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKSPHI 73
           VLG+G++G V+   K   +   Q  A+K ++    K ++ V     R+I  L E+  P I
Sbjct: 31  VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHPFI 88

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           ++L  AF  +G L+L+ +F+   DL T +    +F +  D+K Y+      L   H   +
Sbjct: 89  VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALALDHLHSLGI 147

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-----------GSPDRRFTHQVFARWYRAPE 181
           ++RD+KP N+L+   G +KL DFGL++             G+ +           Y APE
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE-----------YMAPE 196

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           ++   + +    D W+ G +  E+L    PF     D  +                    
Sbjct: 197 VVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQ--GKDRKET------------------- 234

Query: 241 YLPDYVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARI-----TAQQALEHRYF 294
                     +    L    P   S +A  LL  +F  +P  R+       ++   H +F
Sbjct: 235 -------MTMILKAKLG--MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

Query: 295 SS 296
           S+
Sbjct: 286 ST 287

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 97.3 bits (243), Expect = 8e-23
 Identities = 89/371 (23%), Positives = 152/371 (40%), Gaps = 84/371 (22%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELKS 70
            YLK  +LG+GT+G V    +  TG+  A+K +R      K+ V  T + E ++L+  + 
Sbjct: 8   DYLK--LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT-VTESRVLQNTRH 64

Query: 71  PHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           P +  L  AF     L  V E+    +L   +    +F +    + Y    +  L + H 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHS 123

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWYR 178
           + V++RD+K  NL++   G +K+ DFGL           + F G+P+           Y 
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE-----------YL 172

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE+L     YG  VD W  G +  E++  R PF   + D ++L                
Sbjct: 173 APEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERL---------------- 213

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALEH 291
                     ++ +    +R  FP + S +A  LL+ +   DPK R+      A++ +EH
Sbjct: 214 ----------FELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261

Query: 292 RYFSS---APLPTEPNKLP---RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMP--- 340
           R+F S     +     KL    +P          F+ +       ++PP +   +     
Sbjct: 262 RFFLSINWQDV--VQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLEL 319

Query: 341 ----DREGFEG 347
               ++E FE 
Sbjct: 320 DQREEQEMFED 330

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 72/305 (23%), Positives = 125/305 (40%), Gaps = 73/305 (23%)

Query: 19  VLGEGTYGVVY---KAIDTKTGQTVAIKKIR----LGKQKEGVNFTALREIKLLKELKSP 71
           VLG+G YG V+   K     TG+  A+K ++    +   K+  +  A R I  L+E+K P
Sbjct: 24  VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHP 81

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYM-QMTLKGLAFCHK 129
            I++LI AF   G L+L+ E++   +L   +    IF        Y+ ++++  L   H+
Sbjct: 82  FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF-MEDTACFYLAEISM-ALGHLHQ 139

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-----------GSPDRRFTHQVFARWYR 178
           K +++RD+KP N+++   G +KL DFGL +             G+ +           Y 
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE-----------YM 188

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           APE+L     +   VD W+ G +  ++L    PF     +  +                 
Sbjct: 189 APEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFT--GENRKKT---------------- 229

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARI-----TAQQALEH 291
                        +    L    P   + +A DLL K+   +  +R+      A +   H
Sbjct: 230 ----------IDKILKCKLN--LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277

Query: 292 RYFSS 296
            +F  
Sbjct: 278 PFFRH 282

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 95.8 bits (239), Expect = 1e-22
 Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 19/201 (9%)

Query: 13  RYLK-REVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLK 66
           R+LK    LGEG +G V           TG+ VA+K ++       +      +EI++L+
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL--KKEIEILR 78

Query: 67  ELKSPHIIELIDAFPHKGN--LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L   +I++        G   + L+ EF+ +  L+  +      ++      Y     KG
Sbjct: 79  NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKG 138

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRA 179
           + +   +  +HRD+   N+L+ S  Q+K+ DFGL +   +    +T +        WY A
Sbjct: 139 MDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWY-A 197

Query: 180 PE-LLFGAKQYGAGVDVWAAG 199
           PE L+    ++    DVW+ G
Sbjct: 198 PECLMQS--KFYIASDVWSFG 216

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 95.4 bits (238), Expect = 4e-22
 Identities = 79/360 (21%), Positives = 135/360 (37%), Gaps = 68/360 (18%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFT-ALREIKLLKELKSPHIIE 75
           V+G G+Y  V      KT +  A+K ++       E +++    + +   +    P ++ 
Sbjct: 16  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNHPFLVG 74

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L   F  +  L  V E++   DL   ++           + Y       L + H++ +++
Sbjct: 75  LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSAEISLALNYLHERGIIY 133

Query: 135 RDMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWYRAPELL 183
           RD+K +N+L+ S G +KL D+G+             F G+P+           Y APE+L
Sbjct: 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN-----------YIAPEIL 182

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
            G + YG  VD WA G +  E++  R PF    S  +                     YL
Sbjct: 183 RG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN--------------TEDYL 227

Query: 243 PDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI------TAQQALEHRYFS 295
                +Q +    +R   P S S  A  +L      DPK R+             H +F 
Sbjct: 228 -----FQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280

Query: 296 S---APLPTEPNKLP---RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGFEG 347
           +     +  E  ++    +P         +F+ Q    P  L+P         D+  FEG
Sbjct: 281 NVDWDMM--EQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEG 338

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 94.2 bits (235), Expect = 4e-22
 Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 17/208 (8%)

Query: 15  LKREVLGEGTYGVVYKAIDTKTGQT--VAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
           +    LG G +G V + +     +   VAIK ++ G ++ +      +RE +++ +L +P
Sbjct: 13  IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEM--MREAQIMHQLDNP 70

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I+ LI        L LV E      L   +      +  +++   +     G+ +  +K
Sbjct: 71  YIVRLI-GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 129

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFG 185
             +HRD+   N+L+ +    K++DFGL++  G+ D  +T +       +WY APE + F 
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-APECINFR 188

Query: 186 AKQYGAGVDVWAAGCIFAELLN--RRPF 211
             ++ +  DVW+ G    E L+  ++P+
Sbjct: 189 --KFSSRSDVWSYGVTMWEALSYGQKPY 214

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 95.4 bits (238), Expect = 4e-22
 Identities = 90/362 (24%), Positives = 141/362 (38%), Gaps = 81/362 (22%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK----QKEGVNFT-ALREIKLLKELKSPHI 73
           VLG+G++G V  A   +TG   A+K ++  K    Q + V  T   + I L      P +
Sbjct: 30  VLGKGSFGKVMLARVKETGDLYAVKVLK--KDVILQDDDVECTMTEKRI-LSLARNHPFL 86

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
            +L   F     L  V EF+   DL   I+ +  F   A  + Y    +  L F H K +
Sbjct: 87  TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRF-DEARARFYAAEIISALMFLHDKGI 145

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF-----------GSPDRRFTHQVFARWYRAPE 181
           ++RD+K +N+L+   G  KLADFG+ +             G+PD           Y APE
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD-----------YIAPE 194

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240
           +L     YG  VD WA G +  E+L    PF   + + D L                   
Sbjct: 195 ILQE-MLYGPAVDWWAMGVLLYEMLCGHAPFE--AENEDDL------------------- 232

Query: 241 YLPDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI------TAQQALEHRY 293
                  ++ +    +   +P    +DA  +L    T +P  R+           L H +
Sbjct: 233 -------FEAILNDEVV--YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPF 283

Query: 294 FSS---APLPTEPNKLP---RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGF 345
           F     A L     ++    RP  K     S+F+P   +   VL+P  +    M +++ F
Sbjct: 284 FKEIDWAQL--NHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEF 341

Query: 346 EG 347
             
Sbjct: 342 RN 343

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 96.0 bits (239), Expect = 6e-22
 Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 68/306 (22%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG--KQKEGVNFTALREIKLLKELKS 70
            YLK  +LG+GT+G V    +  TG+  A+K ++      K+ V  T L E ++L+  + 
Sbjct: 151 EYLK--LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRH 207

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH- 128
           P +  L  +F     L  V E+    +L   +    +F      + Y    +  L + H 
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-RARFYGAEIVSALDYLHS 266

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWY 177
           +K V++RD+K  NL++   G +K+ DFGL           + F G+P+           Y
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE-----------Y 315

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
            APE+L     YG  VD W  G +  E++  R PF   + D ++L               
Sbjct: 316 LAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKL--------------- 357

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARI-----TAQQALE 290
                      ++ +    +R  FP     +A  LLS +   DPK R+      A++ ++
Sbjct: 358 -----------FELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404

Query: 291 HRYFSS 296
           HR+F+ 
Sbjct: 405 HRFFAG 410

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 96.4 bits (240), Expect = 6e-22
 Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 11/200 (5%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
             LG G YG VY+ +  K   TVA+K ++    +    F  L+E  ++KE+K P++++L+
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EF--LKEAAVMKEIKHPNLVQLL 282

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
                +   +++ EFM   +L   +R  N   +S   +          + +  KK  +HR
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGV 193
           ++   N L+G +  +K+ADFGL+R+            +   +W  APE L    ++    
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT-APESLA-YNKFSIKS 400

Query: 194 DVWAAGCIFAELLN--RRPF 211
           DVWA G +  E+      P+
Sbjct: 401 DVWAFGVLLWEIATYGMSPY 420

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 95.1 bits (237), Expect = 9e-22
 Identities = 78/360 (21%), Positives = 135/360 (37%), Gaps = 68/360 (18%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFT-ALREIKLLKELKSPHIIE 75
           V+G G+Y  V      KT +  A++ ++       E +++    + +   +    P ++ 
Sbjct: 59  VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHV-FEQASNHPFLVG 117

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L   F  +  L  V E++   DL   ++           + Y       L + H++ +++
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSAEISLALNYLHERGIIY 176

Query: 135 RDMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWYRAPELL 183
           RD+K +N+L+ S G +KL D+G+             F G+P+           Y APE+L
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN-----------YIAPEIL 225

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
            G + YG  VD WA G +  E++  R PF    S  +                     YL
Sbjct: 226 RG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN--------------TEDYL 270

Query: 243 PDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI------TAQQALEHRYFS 295
                +Q +    +R   P S S  A  +L      DPK R+             H +F 
Sbjct: 271 -----FQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323

Query: 296 S---APLPTEPNKLP---RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGFEG 347
           +     +  E  ++    +P         +F+ Q    P  L+P         D+  FEG
Sbjct: 324 NVDWDMM--EQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEG 381

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 93.1 bits (232), Expect = 1e-21
 Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 14/192 (7%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLGKQKEGVNFTA-LREIKLLKELKSPHI 73
           E LG+G++GVV +      +    +VA+K ++     +       +RE+  +  L   ++
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E      L   +R          +  Y     +G+ +   K  
Sbjct: 84  IRLY-GVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAK 187
           +HRD+   NLL+ +   +K+ DFGL R     D  +  Q        W  APE L     
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-APESLKTR-- 199

Query: 188 QYGAGVDVWAAG 199
            +    D W  G
Sbjct: 200 TFSHASDTWMFG 211

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 92.3 bits (230), Expect = 2e-21
 Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 13/193 (6%)

Query: 15  LKREVLGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ + LG G +G V K      K  +TVA+K ++       +    L E  ++++L +P+
Sbjct: 20  LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 79

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I+ +I       +  LV E  E   L   ++  N  +   +I   +     G+ +  +  
Sbjct: 80  IVRMI-GICEAESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESN 137

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGA 186
            +HRD+   N+L+ +    K++DFGL++   + +  +  Q       +WY APE + +  
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYY- 195

Query: 187 KQYGAGVDVWAAG 199
            ++ +  DVW+ G
Sbjct: 196 -KFSSKSDVWSFG 207

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 16/192 (8%)

Query: 18  EVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPH 72
           +VLG G +G VYK +      K    VAIK++R     K       L E  ++  + +PH
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI--LDEAYVMASVDNPH 78

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +  L+        + L+ + M    L   +R     +    + ++     KG+ +   + 
Sbjct: 79  VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFA-RWYRAPE-LLFGAK 187
           ++HRD+   N+L+ +   +K+ DFGLA++ G+ +            +W  A E +L    
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHR-- 194

Query: 188 QYGAGVDVWAAG 199
            Y    DVW+ G
Sbjct: 195 IYTHQSDVWSYG 206

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 92.3 bits (230), Expect = 2e-21
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
             LG G YG VY+ +  K   TVA+K ++    +    F  L+E  ++KE+K P++++L+
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEF--LKEAAVMKEIKHPNLVQLL 75

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
                +   +++ EFM   +L   +R  N   +S   +          + +  KK  +HR
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAKQYG 190
           D+   N L+G +  +K+ADFGL+R+       +T    A    +W  APE L +   ++ 
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWT-APESLAYN--KFS 190

Query: 191 AGVDVWAAG 199
              DVWA G
Sbjct: 191 IKSDVWAFG 199

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 92.4 bits (230), Expect = 3e-21
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 21/201 (10%)

Query: 13  RYLK-REVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLLK 66
           RYLK    LGEG +G V        +  TG+ VA+K ++     +  + +   +EI +L+
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGW--KQEIDILR 88

Query: 67  ELKSPHIIELIDA--FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKG 123
            L   HII+           +L LV E++    L   +   +  +  A +  + Q   +G
Sbjct: 89  TLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEG 146

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRA 179
           +A+ H +  +HRD+   N+L+ +   +K+ DFGLA+        +  +        WY A
Sbjct: 147 MAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-A 205

Query: 180 PE-LLFGAKQYGAGVDVWAAG 199
           PE L     ++    DVW+ G
Sbjct: 206 PECLKEY--KFYYASDVWSFG 224

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 92.7 bits (231), Expect = 4e-21
 Identities = 89/365 (24%), Positives = 146/365 (40%), Gaps = 79/365 (21%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG--KQKEGVNFT-ALREIKLLKELK 69
            +L   VLG+G++G V  +    T +  A+K ++     Q + V  T   + + L    K
Sbjct: 23  NFLM--VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV-LALPGK 79

Query: 70  SPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            P + +L   F     L+ V E++   DL   I+    F  P     Y      GL F  
Sbjct: 80  PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP-HAVFYAAEIAIGLFFLQ 138

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWY 177
            K +++RD+K +N+++ S G +K+ADFG+           + F G+PD           Y
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPD-----------Y 187

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
            APE++   + YG  VD WA G +  E+L  + PF     D D+L               
Sbjct: 188 IAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFE--GEDEDEL--------------- 229

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARI-----TAQQALE 290
                      +Q +    +   +P S S +A+ +   + T  P  R+       +   E
Sbjct: 230 -----------FQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276

Query: 291 HRYFSS---APLPTEPNKLP---RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDR 342
           H +F       L  E  ++    +P       A +F+      P VL+PP +      D+
Sbjct: 277 HAFFRYIDWEKL--ERKEIQPPYKPKAC-GRNAENFDRFFTRHPPVLTPPDQEVIRNIDQ 333

Query: 343 EGFEG 347
             FEG
Sbjct: 334 SEFEG 338

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 91.2 bits (227), Expect = 5e-21
 Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 17/194 (8%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY      +       A+K +       E   F  L E  ++K+   P++
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 88

Query: 74  IELIDA-FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ +   K 
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFA---RWYRAPE-LLFG 185
            +HRD+   N ++     +K+ADFGLAR     +              +W  A E L   
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM-ALESLQTQ 207

Query: 186 AKQYGAGVDVWAAG 199
             ++    DVW+ G
Sbjct: 208 --KFTTKSDVWSFG 219

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 93.1 bits (231), Expect = 1e-20
 Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 17/208 (8%)

Query: 15  LKREVLGEGTYGVVYKAI-DTKTGQT-VAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
           +    LG G +G V + +   +  Q  VAIK ++ G ++ +      +RE +++ +L +P
Sbjct: 339 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEM--MREAQIMHQLDNP 396

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I+ LI        L LV E      L   +      +  +++   +     G+ +  +K
Sbjct: 397 YIVRLI-GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 455

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFG 185
             +HR++   N+L+ +    K++DFGL++  G+ D  +T +       +WY APE + F 
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-APECINFR 514

Query: 186 AKQYGAGVDVWAAGCIFAELLN--RRPF 211
             ++ +  DVW+ G    E L+  ++P+
Sbjct: 515 --KFSSRSDVWSYGVTMWEALSYGQKPY 540

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 91.6 bits (228), Expect = 1e-20
 Identities = 71/299 (23%), Positives = 121/299 (40%), Gaps = 65/299 (21%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIR---LGKQKEGVNFTALREIKLLKELKSPHIIE 75
           V+G+G++G V  A         A+K ++   + K+KE  +  + R + LLK +K P ++ 
Sbjct: 45  VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLVG 103

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
           L  +F     L+ V +++   +L   ++    FL P   + Y       L + H   +++
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP-RARFYAAEIASALGYLHSLNIVY 162

Query: 135 RDMKPNNLLIGSHGQLKLADFGL----------ARIF-GSPDRRFTHQVFARWYRAPELL 183
           RD+KP N+L+ S G + L DFGL             F G+P+           Y APE+L
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPE-----------YLAPEVL 211

Query: 184 FGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
              + Y   VD W  G +  E+L    PF   S +  ++                     
Sbjct: 212 HK-QPYDRTVDWWCLGAVLYEMLYGLPPFY--SRNTAEM--------------------- 247

Query: 243 PDYVEYQYVAAPPLRSLFP-SASDDALDLLSKMFTYDPKARITAQQALE----HRYFSS 296
                Y  +   PL+     + ++ A  LL  +   D   R+ A+        H +FS 
Sbjct: 248 -----YDNILNKPLQ--LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 17/202 (8%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LG G +GVV      K    VA+K I+ G   E   F   +E + + +L  P +++  
Sbjct: 14  KELGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMSE-DEF--FQEAQTMMKLSHPKLVKFY 69

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                +  +++V E++    L   +R+    L P+ +        +G+AF      +HRD
Sbjct: 70  GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRD 129

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAKQYGA 191
           +   N L+     +K++DFG+ R     D ++   V      +W  APE   +   +Y +
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYV--LDDQYVSSVGTKFPVKWS-APEVFHYF--KYSS 184

Query: 192 GVDVWAAGCIFAELLN--RRPF 211
             DVWA G +  E+ +  + P+
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPY 206

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 89.6 bits (223), Expect = 2e-20
 Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 25/215 (11%)

Query: 5   DLSKKVADRYLKRE--------VLGEGTYGVVYKAI---DTKTGQTVAIKKIRLG-KQKE 52
            L  +V D  +  E        V+G+G +GVVY        +     AIK +    + ++
Sbjct: 6   ALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQ 65

Query: 53  GVNFTALREIKLLKELKSPHIIELIDA-FPHKGNLHLVFEFMET-DLETVIRNTNIFLSP 110
              F  LRE  L++ L  P+++ LI    P +G  H++  +M   DL   IR+     + 
Sbjct: 66  VEAF--LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV 123

Query: 111 ADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----R 166
            D+ S+     +G+ +  ++  +HRD+   N ++     +K+ADFGLAR     +    +
Sbjct: 124 KDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183

Query: 167 RFTHQVF-ARWYRAPE-LLFGAKQYGAGVDVWAAG 199
           +  H     +W  A E L     ++    DVW+ G
Sbjct: 184 QHRHARLPVKWT-ALESLQTY--RFTTKSDVWSFG 215

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 91.4 bits (227), Expect = 2e-20
 Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 13/200 (6%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
             LG+G +G V+      T + VAIK ++ G       F  L+E +++K+L+   +++L 
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPE-AF--LQEAQVMKKLRHEKLVQLY 245

Query: 78  DAFPHKGNLHLVFEFME-TDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
                +  +++V E+M    L   ++  T  +L    +         G+A+  +   +HR
Sbjct: 246 AVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304

Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFA-RWYRAPELLFGAKQYGAGV 193
           D++  N+L+G +   K+ADFGLAR I  +         F  +W  APE      ++    
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT-APEAAL-YGRFTIKS 362

Query: 194 DVWAAGCIFAELLN--RRPF 211
           DVW+ G +  EL    R P+
Sbjct: 363 DVWSFGILLTELTTKGRVPY 382

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 91.3 bits (227), Expect = 2e-20
 Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 19/188 (10%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + +G+G +G V        G  VA+K I+     +   F  L E  ++ +L+  ++++L+
Sbjct: 199 QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQ--AF--LAEASVMTQLRHSNLVQLL 252

Query: 78  DA-FPHKGNLHLVFEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                 KG L++V E+M    L   +R+     L    +  +     + + +      +H
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312

Query: 135 RDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE-LLFGAKQYGA 191
           RD+   N+L+      K++DFGL +         +       +W  APE L     ++  
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP----VKWT-APEALREK--KFST 365

Query: 192 GVDVWAAG 199
             DVW+ G
Sbjct: 366 KSDVWSFG 373

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 89.6 bits (223), Expect = 2e-20
 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 25/202 (12%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPH 72
           ++LGEG +G V +     +  T   VA+K  K+    Q+E   F  L E   +K+   P+
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEF--LSEAACMKDFSHPN 97

Query: 73  IIELI-----DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADI--KSYMQMTL--- 121
           +I L+      +        ++  FM+  DL T +  + +   P  I  ++ ++  +   
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-ARWYR 178
            G+ +   +  LHRD+   N ++     + +ADFGL++   S D  R+        +W  
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI- 216

Query: 179 APE-LLFGAKQYGAGVDVWAAG 199
           A E L      Y +  DVWA G
Sbjct: 217 AIESLADR--VYTSKSDVWAFG 236

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 88.8 bits (221), Expect = 2e-20
 Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 13/200 (6%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + +G G +G+V+          VAIK IR G   E  +F  + E +++ +L  P +++L 
Sbjct: 14  QEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSE-EDF--IEEAEVMMKLSHPKLVQLY 69

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                +  + LV EFME   L   +R      +   +        +G+A+  +  V+HRD
Sbjct: 70  GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQVFA-RWYRAPE-LLFGAKQYGAGV 193
           +   N L+G +  +K++DFG+ R          T   F  +W  +PE   F   +Y +  
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA-SPEVFSFS--RYSSKS 186

Query: 194 DVWAAGCIFAELLN--RRPF 211
           DVW+ G +  E+ +  + P+
Sbjct: 187 DVWSFGVLMWEVFSEGKIPY 206

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 88.4 bits (220), Expect = 4e-20
 Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 21/202 (10%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + +G+G +G V        G  VA+K I+     +   F  L E  ++ +L+  ++++L+
Sbjct: 27  QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQ--AF--LAEASVMTQLRHSNLVQLL 80

Query: 78  DA-FPHKGNLHLVFEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
                 KG L++V E+M    L   +R+     L    +  +     + + +      +H
Sbjct: 81  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140

Query: 135 RDMKPNNLLIGSHGQLKLADFGLAR--IFGSPDRRFTHQVFARWYRAPE-LLFGAKQYGA 191
           RD+   N+L+      K++DFGL +         +       +W  APE L     ++  
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP----VKWT-APEALREK--KFST 193

Query: 192 GVDVWAAGCIFAEL--LNRRPF 211
             DVW+ G +  E+    R P+
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPY 215

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 89.7 bits (223), Expect = 4e-20
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 19/220 (8%)

Query: 18  EVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPH 72
           +V+G G +G VYK +      K    VAIK ++ G  +K+ V+F  L E  ++ +    +
Sbjct: 50  KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF--LGEAGIMGQFSHHN 107

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           II L         + ++ E+ME   L+  +R  +   S   +   ++    G+ +     
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGA 186
            +HRD+   N+L+ S+   K++DFGL+R+                  RW  APE + +  
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT-APEAISYR- 225

Query: 187 KQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKI 224
            ++ +  DVW+ G +  E++    RP+    S+ + +  I
Sbjct: 226 -KFTSASDVWSFGIVMWEVMTYGERPY-WELSNHEVMKAI 263

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 89.7 bits (223), Expect = 4e-20
 Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 17/206 (8%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHI 73
           +V+G G +G V        +K   +VAIK +++G  +K+  +F  L E  ++ +   P+I
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF--LGEASIMGQFDHPNI 108

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L         + +V E+ME   L++ +R  +   +   +   ++    G+ +      
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAK 187
           +HRD+   N+LI S+   K++DFGL R+                  RW  +PE + +   
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYR-- 225

Query: 188 QYGAGVDVWAAGCIFAELLN--RRPF 211
           ++ +  DVW+ G +  E+++   RP+
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY 251

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 88.4 bits (220), Expect = 4e-20
 Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 18/192 (9%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHI 73
            +LGEG +G VY+ +          VA+K  +          F  + E  ++K L  PHI
Sbjct: 18  RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF--MSEAVIMKNLDHPHI 75

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           ++LI     +    ++ E     +L   +      L    +  Y     K +A+      
Sbjct: 76  VKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 134

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAK 187
           +HRD+   N+L+ S   +KL DFGL+R     D  +          +W  +PE + F   
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDED--YYKASVTRLPIKWM-SPESINFR-- 189

Query: 188 QYGAGVDVWAAG 199
           ++    DVW   
Sbjct: 190 RFTTASDVWMFA 201

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 89.3 bits (222), Expect = 5e-20
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 16/192 (8%)

Query: 18  EVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPH 72
           +VLG G +G VYK +      K    VAIK++R     K       L E  ++  + +PH
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI--LDEAYVMASVDNPH 78

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +  L+        + L+ + M    L   +R     +    + ++     KG+ +   + 
Sbjct: 79  VCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE-LLFGAK 187
           ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +   V  +W  A E +L    
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM-ALESILHR-- 194

Query: 188 QYGAGVDVWAAG 199
            Y    DVW+ G
Sbjct: 195 IYTHQSDVWSYG 206

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 88.9 bits (221), Expect = 5e-20
 Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 16/192 (8%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPH 72
           +VLG G +G V+K +    G+     V IK I     ++          +  +  L   H
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV--TDHMLAIGSLDHAH 76

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           I+ L+       +L LV +++    L   +R     L P  + ++     KG+ +  +  
Sbjct: 77  IVRLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRAPE-LLFGAK 187
           ++HR++   N+L+ S  Q+++ADFG+A +    D++  +       +W  A E + FG  
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM-ALESIHFG-- 192

Query: 188 QYGAGVDVWAAG 199
           +Y    DVW+ G
Sbjct: 193 KYTHQSDVWSYG 204

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 90.7 bits (225), Expect = 6e-20
 Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 13/200 (6%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
             LG+G +G V+      T + VAIK ++ G       F  L+E +++K+L+   +++L 
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPE-AF--LQEAQVMKKLRHEKLVQLY 328

Query: 78  DAFPHKGNLHLVFEFME-TDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
                +  +++V E+M    L   ++  T  +L    +         G+A+  +   +HR
Sbjct: 329 AVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387

Query: 136 DMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVFA-RWYRAPELLFGAKQYGAGV 193
           D++  N+L+G +   K+ADFGLAR I  +         F  +W  APE      ++    
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT-APEAAL-YGRFTIKS 445

Query: 194 DVWAAGCIFAELLN--RRPF 211
           DVW+ G +  EL    R P+
Sbjct: 446 DVWSFGILLTELTTKGRVPY 465

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 88.5 bits (220), Expect = 6e-20
 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 26/203 (12%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIK--KIRLGKQKEGVNFTALREIKLLKELKSPH 72
            +LG+G +G V +A    +  +   VA+K  K  +    +   F  LRE   +KE   PH
Sbjct: 29  RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEF--LREAACMKEFDHPH 86

Query: 73  IIELI------DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADI--KSYMQMTL-- 121
           + +L+       A        ++  FM+  DL   +  + I  +P ++  ++ ++  +  
Sbjct: 87  VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146

Query: 122 -KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-ARWY 177
             G+ +   +  +HRD+   N ++     + +ADFGL+R   S D  R+        +W 
Sbjct: 147 ACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206

Query: 178 RAPE-LLFGAKQYGAGVDVWAAG 199
            A E L      Y    DVWA G
Sbjct: 207 -ALESLADN--LYTVHSDVWAFG 226

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 87.7 bits (218), Expect = 7e-20
 Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
             +GEG +G V++ I          VAIK  +          F  L+E   +++   PHI
Sbjct: 21  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 78

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           ++LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  
Sbjct: 79  VKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAK 187
           +HRD+   N+L+ S+  +KL DFGL+R        +          +W  APE + F   
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--YYKASKGKLPIKWM-APESINFR-- 192

Query: 188 QYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKI 224
           ++ +  DVW  G    E+L    +PF QG  + D +G+I
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPF-QGVKNNDVIGRI 230

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 89.0 bits (221), Expect = 9e-20
 Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 17/194 (8%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
           EV+G G +G VY      +       A+K +       E   F  L E  ++K+   P++
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQF--LTEGIIMKDFSHPNV 152

Query: 74  IELIDA-FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           + L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K 
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA-----RWYRAPE-LLFG 185
            +HRD+   N ++     +K+ADFGLAR     +    H         +W  A E L   
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM-ALESLQTQ 271

Query: 186 AKQYGAGVDVWAAG 199
             ++    DVW+ G
Sbjct: 272 --KFTTKSDVWSFG 283

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 17/206 (8%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHI 73
           +++G G  G V         +    VAIK ++ G  +++  +F  L E  ++ +   P+I
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF--LSEASIMGQFDHPNI 112

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I L           +V E+ME   L+T +R  +   +   +   ++    G+ +      
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLAR-IFGSPDRRFTHQVF---ARWYRAPE-LLFGAK 187
           +HRD+   N+L+ S+   K++DFGL+R +   PD  +T        RW  APE + F   
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT-APEAIAFR-- 229

Query: 188 QYGAGVDVWAAGCIFAELLN--RRPF 211
            + +  DVW+ G +  E+L    RP+
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERPY 255

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 40/159 (25%), Positives = 83/159 (52%), Gaps = 15/159 (9%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKI-RLGKQ--KEGVNFTALREIKLLKELKSPHIIE 75
           ++G G +G VYK +  + G  VA+K+      Q  +E   F    EI+ L   + PH++ 
Sbjct: 46  LIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEE---FET--EIETLSFCRHPHLVS 99

Query: 76  LIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKW 131
           LI     +  + L++++ME  +L+  +  +++       +  +++ +   +GL + H + 
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA 159

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170
           ++HRD+K  N+L+  +   K+ DFG+++     D+  TH
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQ--TH 196

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 25/202 (12%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
             LG+G++G+VY+ +       +    VAIK +      +E + F  L E  ++KE    
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEF--LNEASVMKEFNCH 88

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRN------TNIFLSPADIKSYMQMTL--- 121
           H++ L+          ++ E M   DL++ +R+       N  L+P  +   +QM     
Sbjct: 89  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-ARWYR 178
            G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +   RW  
Sbjct: 149 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 207

Query: 179 APE-LLFGAKQYGAGVDVWAAG 199
           +PE L  G   +    DVW+ G
Sbjct: 208 SPESLKDG--VFTTYSDVWSFG 227

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 89.1 bits (221), Expect = 2e-19
 Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 16/204 (7%)

Query: 18  EVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHI 73
             +GEG +G V++ I          VAIK  +          F  L+E   +++   PHI
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 453

Query: 74  IELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           ++LI     +  + ++ E     +L + ++     L  A +  Y       LA+   K  
Sbjct: 454 VKLI-GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPE-LLFGAKQY 189
           +HRD+   N+L+ S+  +KL DFGL+R        +    ++  +W  APE + F   ++
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESINFR--RF 569

Query: 190 GAGVDVWAAGCIFAELLN--RRPF 211
            +  DVW  G    E+L    +PF
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPF 593

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 85.4 bits (212), Expect = 5e-19
 Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 15/188 (7%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LG G +GVV      +    VAIK I+ G   E   F  + E K++  L    +++L 
Sbjct: 30  KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE-DEF--IEEAKVMMNLSHEKLVQLY 85

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                +  + ++ E+M    L   +R          +    +   + + +   K  LHRD
Sbjct: 86  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 145

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAKQYGA 191
           +   N L+   G +K++DFGL+R     D  +T  V +    RW   PE L++   ++ +
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWS-PPEVLMYS--KFSS 200

Query: 192 GVDVWAAG 199
             D+WA G
Sbjct: 201 KSDIWAFG 208

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 85.8 bits (213), Expect = 7e-19
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 29/206 (14%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
             LGEG +G V+ A        +    VA+K ++   +    +F   RE +LL  L+  H
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF--QREAELLTMLQHQH 104

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIR-----------NTNIFLSPADIKSYMQMT 120
           I+           L +VFE+M   DL   +R             ++   P  +   + + 
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164

Query: 121 L---KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF-A 174
                G+ +      +HRD+   N L+G    +K+ DFG++R   S D  R     +   
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224

Query: 175 RWYRAPE-LLFGAKQYGAGVDVWAAG 199
           RW   PE +L+   ++    DVW+ G
Sbjct: 225 RWM-PPESILYR--KFTTESDVWSFG 247

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 85.0 bits (211), Expect = 9e-19
 Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 30/207 (14%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
             LGEG +G V+ A       TK    VA+K ++        +F   RE +LL  L+  H
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF--QREAELLTNLQHEH 78

Query: 73  IIELIDAFPHKGNLHLVFEFMET-DLETVIR------------NTNIFLSPADIKSYMQM 119
           I++          L +VFE+M+  DL   +R                      +   + +
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138

Query: 120 TL---KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF- 173
                 G+ +   +  +HRD+   N L+G++  +K+ DFG++R   S D  R   H +  
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198

Query: 174 ARWYRAPE-LLFGAKQYGAGVDVWAAG 199
            RW   PE +++   ++    DVW+ G
Sbjct: 199 IRWM-PPESIMYR--KFTTESDVWSFG 222

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 84.3 bits (209), Expect = 1e-18
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 30/202 (14%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQT-------VAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           E LG+GT+  ++K +  + G         V +K +    +    +F       ++ +L  
Sbjct: 14  ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF--FEAASMMSKLSH 71

Query: 71  PHIIELI----DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
            H++                 LV EF++   L+T ++     ++        +     + 
Sbjct: 72  KHLVLNYGVCVCGDE----NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMH 127

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQL--------KLADFGLARIFGSPDRRFTHQVFARWY 177
           F  +  ++H ++   N+L+              KL+D G++      D     Q    W 
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD---ILQERIPWV 184

Query: 178 RAPELLFGAKQYGAGVDVWAAG 199
             PE +   K      D W+ G
Sbjct: 185 -PPECIENPKNLNLATDKWSFG 205

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           E LG G +G V+          VA+K ++ G       F  L E  L+K+L+   ++ L 
Sbjct: 19  ERLGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPD-AF--LAEANLMKQLQHQRLVRLY 74

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
            A   +  ++++ E+ME   L   ++  + I L+   +        +G+AF  ++  +HR
Sbjct: 75  -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAKQYG 190
           D++  N+L+      K+ADFGLAR+    D  +T +  A    +W  APE + +G   + 
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWT-APEAINYG--TFT 188

Query: 191 AGVDVWAAG 199
              DVW+ G
Sbjct: 189 IKSDVWSFG 197

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 84.1 bits (209), Expect = 2e-18
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 30/210 (14%)

Query: 19  VLGEGTYGVVYK-AIDTKTGQTVAIKKIRLGKQKEGVN----FTALREIKLLKELKSPHI 73
            +GEG +GVVYK  ++     TVA+KK+              F    EIK++ + +  ++
Sbjct: 38  KMGEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQ--EIKVMAKCQHENL 92

Query: 74  IELIDAFPHKGN-LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTL---KGLAFCH 128
           +EL+  F   G+ L LV+ +M    L   +   +    P       ++      G+ F H
Sbjct: 93  VELL-GFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLH 150

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH---QV---FARWYRAPEL 182
           +   +HRD+K  N+L+      K++DFGLAR         T    ++    A  Y APE 
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARAS--EKFAQTVMTSRIVGTTA--YMAPEA 206

Query: 183 LFGAKQYGAGVDVWAAGCIFAELL-NRRPF 211
           L G  +     D+++ G +  E++      
Sbjct: 207 LRG--EITPKSDIYSFGVVLLEIITGLPAV 234

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 85.5 bits (212), Expect = 2e-18
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LG G +G V+ A   K  + VA+K ++ G       F  L E  ++K L+   +++L 
Sbjct: 194 KKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSV-EAF--LAEANVMKTLQHDKLVKLH 249

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135
            A   K  ++++ EFM    L   ++ +         +  +     +G+AF  ++  +HR
Sbjct: 250 -AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 308

Query: 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA----RWYRAPE-LLFGAKQYG 190
           D++  N+L+ +    K+ADFGLAR+    D  +T +  A    +W  APE + FG   + 
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWT-APEAINFG--SFT 363

Query: 191 AGVDVWAAG 199
              DVW+ G
Sbjct: 364 IKSDVWSFG 372

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 83.6 bits (207), Expect = 4e-18
 Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 21/172 (12%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V   +   + +G G +G +    +  T + VAIK   L   K         E +  K+L 
Sbjct: 7   VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIK---LEPMKSRAP-QLHLEYRFYKQLG 62

Query: 70  -SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSY----MQMTLKGL 124
               I ++    P      +V E +   LE +    +   S   +K+     +Q+ +  +
Sbjct: 63  SGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFS---LKTVLMIAIQL-ISRM 118

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLK-----LADFGLARIFGSPDRRFTHQ 171
            + H K +++RD+KP N LIG  G        + DF LA+ +  P+   T +
Sbjct: 119 EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE---TKK 167

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 82.0 bits (203), Expect = 9e-18
 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKE 67
           +V +RY     +G G++G +Y   D   G+ VAIK      +        L  E K+ K 
Sbjct: 6   RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-----LECVKTKHPQLHIESKIYKM 60

Query: 68  LK-SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSY----MQMTLK 122
           ++    I  +           +V E +   LE +    +   S   +K+      QM + 
Sbjct: 61  MQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFS---LKTVLLLADQM-IS 116

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIF 161
            + + H K  +HRD+KP+N L+G       + + DFGLA+ +
Sbjct: 117 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 32/210 (15%)

Query: 18  EVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKS- 70
           + LG G +G V +A     I +    TVA+K ++      E      + E+K+L  L + 
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL--MSELKVLSYLGNH 86

Query: 71  PHIIELIDAFPHKGNLHLVFEFME-TDLETVIRN-----------------TNIFLSPAD 112
            +I+ L+ A    G   ++ E+    DL   +R                    + L   D
Sbjct: 87  MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146

Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTH 170
           + S+     KG+AF   K  +HRD+   N+L+      K+ DFGLAR   +        +
Sbjct: 147 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206

Query: 171 QVF-ARWYRAPELLFGAKQYGAGVDVWAAG 199
                +W  APE +F    Y    DVW+ G
Sbjct: 207 ARLPVKWM-APESIFNCV-YTFESDVWSYG 234

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 81.6 bits (202), Expect = 1e-17
 Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 20/167 (11%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTAL-REIKLLKEL 68
           V   Y     +GEG++GV+++  +    Q VAIK      +    +   L  E +  K L
Sbjct: 8   VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-----FEPRRSDAPQLRDEYRTYKLL 62

Query: 69  K-SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSY----MQMTLKG 123
                I  +        +  LV + +   LE ++       S   +K+      QM L  
Sbjct: 63  AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFS---VKTVAMAAKQM-LAR 118

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG-----QLKLADFGLARIFGSPD 165
           +   H+K +++RD+KP+N LIG         + + DFG+ + +  P 
Sbjct: 119 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 80.7 bits (200), Expect = 4e-17
 Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 20/176 (11%)

Query: 19  VLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHIIELI 77
           +LG G +G VYK      G  VA+K+++    Q   + F    E++++      +++ L 
Sbjct: 37  ILGRGGFGKVYKGR-LADGTLVAVKRLKEERTQGGELQFQT--EVEMISMAVHRNLLRLR 93

Query: 78  DAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTL---KGLAFCHKKW-- 131
                     LV+ +M    + + +R       P D     ++ L   +GLA+ H     
Sbjct: 94  GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 153

Query: 132 -VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-----YRAPE 181
            ++HRD+K  N+L+    +  + DFGLA++    D + TH V         + APE
Sbjct: 154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTH-VTTAVRGTIGHIAPE 205

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 80.5 bits (199), Expect = 5e-17
 Identities = 39/194 (20%), Positives = 74/194 (38%), Gaps = 38/194 (19%)

Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLL 65
           L     ++++  + +G G +G++Y A  T   +  A   +++  Q+ G  F    E+K  
Sbjct: 31  LDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF---SELKFY 87

Query: 66  KELKSPHIIELIDAFPHKGNL-------------------HLVFEFMETDLETVIRNTNI 106
           + +     I+          L                    +V E +  DL+ +      
Sbjct: 88  QRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGT 147

Query: 107 F-----LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG--SHGQLKLADFGLAR 159
           F     L         +M L  L + H+   +H D+K  NLL+G  +  Q+ LAD+GL+ 
Sbjct: 148 FKKSTVLQLGI-----RM-LDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSY 201

Query: 160 IFGSPDRRFTHQVF 173
            +        H+ +
Sbjct: 202 RYCPNG---NHKQY 212

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 80.4 bits (199), Expect = 5e-17
 Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 28/206 (13%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKS- 70
           + LG G +G V +A             VA+K ++      E      + E+K++  L   
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTL-------- 121
            +I+ L+ A  H G + ++ E+    DL   +R  +  L      +    T         
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169

Query: 122 -----KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVF- 173
                +G+AF   K  +HRD+   N+L+ +    K+ DFGLAR   +        +    
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229

Query: 174 ARWYRAPELLFGAKQYGAGVDVWAAG 199
            +W  APE +F    Y    DVW+ G
Sbjct: 230 VKWM-APESIFDCV-YTVQSDVWSYG 253

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 80.0 bits (198), Expect = 6e-17
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 47/220 (21%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
           + LGEG +G V KA            TVA+K ++      E  +   L E  +LK++  P
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL--LSEFNVLKQVNHP 86

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRN-----------------------TNIF 107
           H+I+L  A    G L L+ E+ +   L   +R                            
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146

Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           L+  D+ S+     +G+ +  +  ++HRD+   N+L+    ++K++DFGL+R     D  
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206

Query: 166 RRFTHQVF-ARWYRAPELLFGAKQYGAGV-----DVWAAG 199
            + +      +W  A E LF        +     DVW+ G
Sbjct: 207 VKRSQGRIPVKWM-AIESLF------DHIYTTQSDVWSFG 239

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 80.0 bits (198), Expect = 6e-17
 Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 32/210 (15%)

Query: 18  EVLGEGTYGVVYKAI-------DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELK 69
           + LGEG +G V  A          K   TVA+K ++    +K+  +   + E++++K + 
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98

Query: 70  S-PHIIELIDAFPHKGNLHLVFEFME-------------TDLETVIRNTNIFLSPADIKS 115
              +II L+ A    G L+++ E+                 +E       +       K 
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 116 YMQMTL---KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTH 170
            +  T    +G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218

Query: 171 QVF-ARWYRAPELLFGAKQYGAGVDVWAAG 199
                +W  APE LF    Y    DVW+ G
Sbjct: 219 GRLPVKWM-APEALFDRV-YTHQSDVWSFG 246

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 80.5 bits (199), Expect = 8e-17
 Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 32/210 (15%)

Query: 18  EVLGEGTYGVVYKAI-------DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELK 69
           + LGEG +G V  A               VA+K ++    +K+  +   + E++++K + 
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 132

Query: 70  S-PHIIELIDAFPHKGNLHLVFEFME-------------TDLETVIRNTNIFLSPADIKS 115
              +II L+ A    G L+++ E+                 LE     ++        K 
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192

Query: 116 YMQMTL---KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTH 170
            +       +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  ++ T+
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252

Query: 171 QVF-ARWYRAPELLFGAKQYGAGVDVWAAG 199
                +W  APE LF    Y    DVW+ G
Sbjct: 253 GRLPVKWM-APEALFDRI-YTHQSDVWSFG 280

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 31/209 (14%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKS- 70
           + LG G +G V +A       T T +TVA+K ++ G    E      + E+K+L  +   
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 90

Query: 71  PHIIELIDA-FPHKGNLHLVFEFMET-DLETVIRN---------------TNIFLSPADI 113
            +++ L+ A     G L ++ EF +  +L T +R+                  FL+   +
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150

Query: 114 KSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQ 171
             Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR         R    
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210

Query: 172 VF-ARWYRAPELLFGAKQYGAGVDVWAAG 199
               +W  APE +F    Y    DVW+ G
Sbjct: 211 RLPLKWM-APETIFDRV-YTIQSDVWSFG 237

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 78.4 bits (194), Expect = 1e-16
 Identities = 44/209 (21%), Positives = 81/209 (38%), Gaps = 33/209 (15%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
           E LGE  +G VYK         +  Q VAIK ++   +      F    E  L   L+ P
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF--RHEAMLRARLQHP 72

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRN----TNIFLSPADIKSYMQMTLKGL-A 125
           +++ L+        L ++F +    DL   +      +++  +  D      +       
Sbjct: 73  NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132

Query: 126 FCH-----------KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQV 172
                            V H+D+   N+L+     +K++D GL R   + D  +   + +
Sbjct: 133 LVAQIAAGMEYLSSHHVV-HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191

Query: 173 F-ARWYRAPE-LLFGAKQYGAGVDVWAAG 199
              RW  APE +++G  ++    D+W+ G
Sbjct: 192 LPIRWM-APEAIMYG--KFSIDSDIWSYG 217

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 79.2 bits (196), Expect = 1e-16
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 22/162 (13%)

Query: 18  EVLGEGTYGVVYKAIDTKTG--QTVAIKKIRLG-KQKEGVNFTALREIKLLKELKS-PHI 73
           +V+GEG +G V KA   K G     AIK+++    + +  +F    E+++L +L   P+I
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF--AGELEVLCKLGHHPNI 88

Query: 74  IELIDAFPHKGNLHLVFEFME-------------TDLETVIRNTNIFLSPADIKSYMQMT 120
           I L+ A  H+G L+L  E+                + +      N   S    +  +   
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148

Query: 121 L---KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159
               +G+ +  +K  +HRD+   N+L+G +   K+ADFGL+R
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 41/202 (20%), Positives = 79/202 (39%), Gaps = 25/202 (12%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
             LG G +G VY+       +  +   VA+K +     +++ ++F  L E  ++ +    
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF--LMEALIISKFNHQ 93

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTL---KGL 124
           +I+  I          ++ E M   DL++ +R         S   +   + +      G 
Sbjct: 94  NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPD--RRFTHQVFA-RWYR 178
            +  +   +HRD+   N L+   G     K+ DFG+AR        R+    +   +W  
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 212

Query: 179 APE-LLFGAKQYGAGVDVWAAG 199
            PE  + G   + +  D W+ G
Sbjct: 213 PPEAFMEG--IFTSKTDTWSFG 232

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 79.7 bits (196), Expect = 2e-16
 Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 16/165 (9%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
            +V +++     +G G++G +Y   + +T + VAIK   +  +        L E K+ + 
Sbjct: 3   PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKIYRI 58

Query: 68  LK-SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSY----MQMTLK 122
           L+    I  +           LV + +   LE +    +  LS   +K+      QM + 
Sbjct: 59  LQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLS---LKTVLMLADQM-IN 114

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSP 164
            + F H K  LHRD+KP+N L+G      Q+ + DFGLA+ +   
Sbjct: 115 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 78.9 bits (195), Expect = 2e-16
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 32/210 (15%)

Query: 18  EVLGEGTYGVVYKAI-------DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELK 69
           + LGEG +G V  A          K   TVA+K ++    +K+  +   + E++++K + 
Sbjct: 87  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 144

Query: 70  S-PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRN----TNIFLSPADIKSYMQMTLK- 122
              +II L+ A    G L+++ E+    +L   +R        +    +     QMT K 
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 123 ----------GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTH 170
                     G+ +   +  +HRD+   N+L+  +  +K+ADFGLAR   + D  ++ T+
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264

Query: 171 QVF-ARWYRAPELLFGAKQYGAGVDVWAAG 199
                +W  APE LF    Y    DVW+ G
Sbjct: 265 GRLPVKWM-APEALFDRV-YTHQSDVWSFG 292

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 78.6 bits (194), Expect = 3e-16
 Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 23/201 (11%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
             LG G +G VY+       +  +   VA+K +     +++ ++F  L E  ++ +    
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF--LMEALIISKFNHQ 134

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTL---KGL 124
           +I+  I          ++ E M   DL++ +R         S   +   + +      G 
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGSPD--RRFTHQVFA-RWYR 178
            +  +   +HRD+   N L+   G     K+ DFG+AR        R+    +   +W  
Sbjct: 195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM- 253

Query: 179 APELLFGAKQYGAGVDVWAAG 199
            PE       + +  D W+ G
Sbjct: 254 PPEAFMEGI-FTSKTDTWSFG 273

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 78.1 bits (193), Expect = 3e-16
 Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 39/216 (18%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSP 71
             +GEG +G V++A        +    VA+K ++         +F   RE  L+ E  +P
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF--QREAALMAEFDNP 110

Query: 72  HIIELIDAFPHKGNLHLVFEFME---------------------TDLETVIRNTNIFLSP 110
           +I++L+        + L+FE+M                      +DL T  R ++    P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170

Query: 111 ADIKSYMQMTL---KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
                 + +      G+A+  ++  +HRD+   N L+G +  +K+ADFGL+R   S D  
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230

Query: 166 RRFTHQVF-ARWYRAPE-LLFGAKQYGAGVDVWAAG 199
           +   +     RW   PE + +   +Y    DVWA G
Sbjct: 231 KADGNDAIPIRWM-PPESIFYN--RYTTESDVWAYG 263

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 37/215 (17%)

Query: 18  EVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKS- 70
           +VLG G +G V  A       T     VA+K ++      E      + E+K++ +L S 
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREAL--MSELKMMTQLGSH 108

Query: 71  PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRN-----------TNIFLSPADIKSYMQ 118
            +I+ L+ A    G ++L+FE+    DL   +R+                   + +    
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168

Query: 119 MTLK-----------GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           +T +           G+ F   K  +HRD+   N+L+     +K+ DFGLAR   S    
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228

Query: 166 RRFTHQVF-ARWYRAPELLFGAKQYGAGVDVWAAG 199
               +     +W  APE LF    Y    DVW+ G
Sbjct: 229 VVRGNARLPVKWM-APESLF-EGIYTIKSDVWSYG 261

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 65.9 bits (161), Expect = 4e-12
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 39/194 (20%)

Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKK---IRLGKQKEGVNFTALREI 62
           ++   A  +     +G+G +G +Y A D  + ++V       +++     G  F    E+
Sbjct: 29  ITDMAAAAWKVGLPIGQGGFGCIYLA-DMNSSESVGSDAPCVVKVEPSDNGPLF---TEL 84

Query: 63  KLLKELKSPHIIELIDAFPHKGNL-------------------HLVFEFMETDLETVIRN 103
           K  +    P  I+          L                    ++ +   +DL+ +   
Sbjct: 85  KFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEA 144

Query: 104 TNIFLSPADIKS-YM---QMTLKGLAFCHKKWVLHRDMKPNNLLIG--SHGQLKLADFGL 157
                S    K+      ++ L  L + H+   +H D+K +NLL+   +  Q+ L D+GL
Sbjct: 145 NAKRFS---RKTVLQLSLRI-LDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGL 200

Query: 158 ARIFGSPDRRFTHQ 171
           A  +        H+
Sbjct: 201 AYRYCPEG---VHK 211

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 44/188 (23%)

Query: 6   LSKKVADRYLKREVLGEGTYGVVYKAIDTKTG--------QTVAIK-------------- 43
           L+ K   ++  +        G++Y+A  T T         Q  ++K              
Sbjct: 36  LTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNF 95

Query: 44  KIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH-LVFEFMETDLETVIR 102
             R  K  +      + + K L       I   +    H+     LV   +   L++ + 
Sbjct: 96  FQRAAKPLQ------VNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALD 149

Query: 103 NTN--IF-----LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG--SHGQLKLA 153
            +   +      L  A      ++ L  L F H+   +H ++   N+ +      Q+ LA
Sbjct: 150 VSPKHVLSERSVLQVAC-----RL-LDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLA 203

Query: 154 DFGLARIF 161
            +G A  +
Sbjct: 204 GYGFAFRY 211

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)

Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           L+   +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR        
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249

Query: 166 RRFTHQVF-ARWYRAPELLFGAKQYGAGVDVWAAG 199
            R        +W  APE +F  + Y    DVW+ G
Sbjct: 250 VRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFG 282

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 18/195 (9%)

Query: 18  EVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKS- 70
           + LG G +G V +A       T T +TVA+K ++ G    E      + E+K+L  +   
Sbjct: 28  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 85

Query: 71  PHIIELIDA-FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            +++ L+ A     G L ++ EF +  +L T +R+      P   K       K      
Sbjct: 86  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE-LLFGAK 187
                  D+K     I S      + F   +     +     +   + +   E L+  + 
Sbjct: 146 -----PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSF 200

Query: 188 QYGAGVDVWAA-GCI 201
           Q   G++  A+  CI
Sbjct: 201 QVAKGMEFLASRKCI 215

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 45/344 (13%), Positives = 96/344 (27%), Gaps = 88/344 (25%)

Query: 28  VYKAIDTKTGQTVAIKKIRLG---KQKEGV--NFTALREIKLLKELK--SPHIIELIDAF 80
           V   +   T   +++    +     + + +   +   R   L +E+   +P  + +I   
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336

Query: 81  PHKGNLHL-VFEFMETD-LETVIRNTNIFLSPADIKSYMQM-------------TLKGL- 124
              G      ++ +  D L T+I ++   L PA+ +                   L  + 
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396

Query: 125 ------------AFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQ 171
                          HK  ++ +   P    I      L+L            +    H+
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQ--PKESTISIPSIYLELK-------VKLENEYALHR 447

Query: 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAEL---LNRRPFLQGSSDIDQLGKIFAAF 228
                Y  P+           +  +     ++ +   L          +I+   +    F
Sbjct: 448 SIVDHYNIPK----TFDSDDLIPPYLDQYFYSHIGHHL---------KNIEHPER-MTLF 493

Query: 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288
                  + D  +L   + +   A         +AS   L+ L ++  Y  K  I     
Sbjct: 494 ----RMVFLDFRFLEQKIRHDSTAW--------NASGSILNTLQQLKFY--KPYICDNDP 539

Query: 289 LEHRYFSSAPLPTEPNKLPRPATK-RASKASD------FNPQEG 325
              R  ++       + LP+       SK +D          E 
Sbjct: 540 KYERLVNAI-----LDFLPKIEENLICSKYTDLLRIALMAEDEA 578

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	397
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.96
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.94
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.9
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.82
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.52
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.4
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.29
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.15
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	99.04
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.78
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.73
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.63
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.54
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.51
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.43
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.39
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	98.08
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.0
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.92
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.83
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.74
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.7
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.69
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.58
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.55
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.55
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.53
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.5
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.17
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.06
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.7
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.57
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	88.6
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	86.45
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	80.44

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.7e-68  Score=492.96  Aligned_cols=263  Identities=24%  Similarity=0.379  Sum_probs=231.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      -.++|++.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+++|+.|+|||||+++++|++++++||
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            35789999999999999999999999999999999986542 23344568899999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC--C
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP--D  165 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~--~  165 (397)
                      |||||+ |+|.+++.+.+ .+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+.+...  .
T Consensus       110 vmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          110 GLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence            999998 58999887654 5999999999999999999999999999999999999999999999999999987533  2


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ....+.+||+.|||||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+.+|.+.--                
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~----------------  251 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY----------------  251 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC----------------
T ss_pred             ccccCcccCcccCCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC----------------
Confidence            34567799999999999987 6799999999999999999999999999988888888876410                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHH------HhcCCCCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ------ALEHRYFSSAPLPTE  302 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e------~l~hp~~~~~~~~~~  302 (397)
                                  .+...+|+++++||.+||++||++|+|++|      +++||||++..|...
T Consensus       252 ------------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l  302 (311)
T 4aw0_A          252 ------------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL  302 (311)
T ss_dssp             ------------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred             ------------CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHh
Confidence                        112346899999999999999999999987      589999999877543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=9.6e-68  Score=496.34  Aligned_cols=258  Identities=25%  Similarity=0.428  Sum_probs=228.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+.|++.+.||+|+||+||+|+++.+|+.||||++.....  .....+.+|+.+|+.++|||||+++++|.+++.+||||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm  150 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  150 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4679999999999999999999999999999999976543  23456789999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |||+ |+|.+++.+.  .+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+.+........
T Consensus       151 Ey~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  228 (346)
T 4fih_A          151 EFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK  228 (346)
T ss_dssp             CCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred             eCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence            9998 5788877653  499999999999999999999999999999999999999999999999999998876666677


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+||++|||||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+..|.......                  
T Consensus       229 ~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~------------------  289 (346)
T 4fih_A          229 SLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR------------------  289 (346)
T ss_dssp             CCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC------------------
T ss_pred             ccccCcCcCCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC------------------
Confidence            8899999999999976 679999999999999999999999999998888887776532100                  


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                             ...+..+|+++++||.+||+.||++|||++|+|+||||+...
T Consensus       290 -------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          290 -------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             -------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             -------CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence                   011234689999999999999999999999999999998643

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.5e-67  Score=505.67  Aligned_cols=291  Identities=35%  Similarity=0.594  Sum_probs=246.2

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee------
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP------   81 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~------   81 (397)
                      ..+.++|++++.||+|+||+||+|+++.+|+.||||++.+..........+++|+.+|+.|+|||||++++++.      
T Consensus        50 ~~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~  129 (398)
T 4b99_A           50 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG  129 (398)
T ss_dssp             CCCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTT
T ss_pred             CCCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccc
Confidence            34568999999999999999999999999999999999765544444456789999999999999999999875      


Q ss_pred             cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           82 HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        82 ~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      +.+.+|||||||+|+|...+.+. ..+++..++.|++||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.+
T Consensus       130 ~~~~~~ivmE~~~g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~  208 (398)
T 4b99_A          130 EFKSVYVVLDLMESDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL  208 (398)
T ss_dssp             TCCCEEEEEECCSEEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred             cCCEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence            34689999999999999988764 46999999999999999999999999999999999999999999999999999876


Q ss_pred             CCC----CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          162 GSP----DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       162 ~~~----~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      ...    .......+||++|||||++.+...|+.++||||||||+|||++|++||.+.+..+++..|+...+.+....|.
T Consensus       209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~  288 (398)
T 4b99_A          209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ  288 (398)
T ss_dssp             -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred             ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence            432    2345567999999999999887778999999999999999999999999999999999999999987766655


Q ss_pred             CCCCCcccc---ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          238 DLAYLPDYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       238 ~~~~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      .........   ........++..+++.+|++++|||.+||.+||++|||++|+|+||||+....
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred             hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence            432211111   11112234566778899999999999999999999999999999999987543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=3.7e-68  Score=499.89  Aligned_cols=258  Identities=25%  Similarity=0.471  Sum_probs=224.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+..........+.+|+.+|++|+|||||+++++|++++.+||||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            47999999999999999999999999999999999877655555567889999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||+ |+|.+++... +..+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+.+.......
T Consensus       103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  182 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA  182 (350)
T ss_dssp             ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred             eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence            9998 6999998765 4458999999999999999999999999999999999999999999999999999875444445


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+||+.|||||++.+ ..|+.++|||||||+||||++|++||.+.+..+.+.++...-.                   
T Consensus       183 ~~~~GT~~YmAPE~l~~-~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-------------------  242 (350)
T 4b9d_A          183 RACIGTPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-------------------  242 (350)
T ss_dssp             HHHHSCCTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-------------------
T ss_pred             cccCCCccccCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-------------------
Confidence            66789999999999977 6799999999999999999999999999998888888776411                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                              ......+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       243 --------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          243 --------PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             --------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             --------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence                    0122356899999999999999999999999999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.2e-67  Score=479.16  Aligned_cols=256  Identities=30%  Similarity=0.479  Sum_probs=210.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.+.... ......+.+|+.+|+.++|||||+++++|++++.+|+|
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            47899999999999999999999999999999999876533 33345678999999999999999999999999999999


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||||+|+|.+.+.+.+ .+++..++.++.||+.||+|||++||+||||||+||||+.+|++||+|||+|+..... ....
T Consensus        92 mEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-~~~~  169 (275)
T 3hyh_A           92 IEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLK  169 (275)
T ss_dssp             EECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----------
T ss_pred             EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC-CccC
Confidence            9999999999998754 5999999999999999999999999999999999999999999999999999876443 3445


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+||+.|||||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+.....                    
T Consensus       170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~--------------------  229 (275)
T 3hyh_A          170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY--------------------  229 (275)
T ss_dssp             -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--------------------
T ss_pred             CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--------------------
Confidence            678999999999998855567899999999999999999999999887777776655311                    


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                              .+...+|+++++||.+||+.||++|||++|+++||||+.
T Consensus       230 --------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          230 --------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             --------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             --------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence                    112345899999999999999999999999999999964

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.6e-66  Score=498.25  Aligned_cols=258  Identities=25%  Similarity=0.428  Sum_probs=228.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.....  .....+.+|+.+|+.|+|||||+++++|.+++.+||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence            4679999999999999999999999999999999986543  33456889999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |||+ |+|.+++...  .+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.+........
T Consensus       228 Ey~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  305 (423)
T 4fie_A          228 EFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK  305 (423)
T ss_dssp             ECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred             eCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence            9998 5788777654  499999999999999999999999999999999999999999999999999998876666677


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+||++|||||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+..|...... .                 
T Consensus       306 ~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~-~-----------------  366 (423)
T 4fie_A          306 SLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-R-----------------  366 (423)
T ss_dssp             CCEECTTTCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-C-----------------
T ss_pred             ccccCcCcCCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC-C-----------------
Confidence            8899999999999976 67999999999999999999999999999888888777653210 0                 


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                             ...+..+|+++++||.+||+.||++|||++|+|+||||+...
T Consensus       367 -------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          367 -------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             -------CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             -------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence                   112245699999999999999999999999999999998643

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.8e-67  Score=486.01  Aligned_cols=258  Identities=26%  Similarity=0.403  Sum_probs=220.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ++|++.+.||+|+||+||+|++.   .+++.||||++.+..........+.+|+.+|++++|||||+++++|++++.+||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            67999999999999999999984   467899999998765444444567889999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||||+ |+|.+++.+.+ .+++..++.|+.||+.||+|||++||+||||||+|||++.+|++||+|||+|+........
T Consensus       104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  182 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK  182 (304)
T ss_dssp             EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CC
T ss_pred             EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCcc
Confidence            999998 58888887654 5999999999999999999999999999999999999999999999999999977665666


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ....+||+.|||||++.+ ..|+.++|||||||+||||++|++||.+.+..+.+..|.+...                  
T Consensus       183 ~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~------------------  243 (304)
T 3ubd_A          183 AYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL------------------  243 (304)
T ss_dssp             CCSCCCCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC------------------
T ss_pred             ccccccCcccCCHHHhcc-CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC------------------
Confidence            677899999999999977 6799999999999999999999999999988888888765310                  


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL  299 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~  299 (397)
                                .++..+|+++++||.+||+.||++|||     ++|+++||||++..|
T Consensus       244 ----------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw  290 (304)
T 3ubd_A          244 ----------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW  290 (304)
T ss_dssp             ----------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             ----------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCH
Confidence                      112346899999999999999999998     589999999998765

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.6e-64  Score=463.87  Aligned_cols=256  Identities=25%  Similarity=0.379  Sum_probs=215.4

Q ss_pred             hcce-eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec----CCe
Q 015948           11 ADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH----KGN   85 (397)
Q Consensus        11 ~~~y-~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~~   85 (397)
                      .++| ++.++||+|+||+||+|+++.++..||+|++............+.+|+.+|++|+|||||+++++|++    +..
T Consensus        24 ~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~  103 (290)
T 3fpq_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             TSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEE
T ss_pred             CCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcE
Confidence            4466 77888999999999999999999999999998765544445668899999999999999999999865    457


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEcc-CCcEEEeeeccceee
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGS-HGQLKLADFGLARIF  161 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~  161 (397)
                      +|||||||+ |+|.+++.+. ..+++..++.|+.||+.||+|||++|  |+||||||+||||+. +|.+||+|||+|+..
T Consensus       104 ~~lvmEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          104 IVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence            899999998 5888888764 45999999999999999999999999  999999999999984 799999999999864


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .  .......+||+.|||||++.+  .|+.++|||||||+||||++|++||.+.++...+...+...  ..+        
T Consensus       183 ~--~~~~~~~~GTp~YmAPE~~~~--~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~--~~~--------  248 (290)
T 3fpq_A          183 R--ASFAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG--VKP--------  248 (290)
T ss_dssp             C--TTSBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT--CCC--------
T ss_pred             C--CCccCCcccCccccCHHHcCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC--CCC--------
Confidence            3  234556789999999999865  59999999999999999999999998877665554433210  000        


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                     .......++++++||.+||+.||++|||++|+|+||||+.
T Consensus       249 ---------------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          249 ---------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             ---------------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             ---------------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                           1122345889999999999999999999999999999975

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.2e-64  Score=472.17  Aligned_cols=253  Identities=26%  Similarity=0.384  Sum_probs=217.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+.|++.++||+|+||+||+|+++.+|+.||||+++....       ..+|+.+|+.|+|||||+++++|.+++.+||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm  129 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM  129 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4579999999999999999999999999999999975432       237999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCCCC--
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDR--  166 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~~~--  166 (397)
                      |||+ |+|.+++.+.+ .+++..++.|+.||+.||+|||++||+||||||+||||+.+| ++||+|||+|+.+.....  
T Consensus       130 Ey~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~  208 (336)
T 4g3f_A          130 ELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK  208 (336)
T ss_dssp             CCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred             eccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence            9998 58988887654 599999999999999999999999999999999999999988 699999999997654321  


Q ss_pred             ---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          167 ---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       167 ---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                         .....+||+.|||||++.+ ..|+.++|||||||+||||++|++||.+.+..+.+.+|...                
T Consensus       209 ~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~----------------  271 (336)
T 4g3f_A          209 SLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE----------------  271 (336)
T ss_dssp             -----CCCCCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS----------------
T ss_pred             ceecCCccccCccccCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC----------------
Confidence               1234579999999999987 67999999999999999999999999988776666666542                


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHH-------------hcCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA-------------LEHRYFSSA  297 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~-------------l~hp~~~~~  297 (397)
                               .+++..+++.+|+++++||.+||++||.+|||+.|+             |+|||+...
T Consensus       272 ---------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          272 ---------PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             ---------CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             ---------CCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence                     122334556789999999999999999999999997             579998754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=5.8e-63  Score=470.34  Aligned_cols=282  Identities=24%  Similarity=0.412  Sum_probs=221.1

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .+.++|++.+.||+|+||+||+|+++   .+++.||||++....    ....+.+|+++|+.+ +|||||+++++|++++
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~   93 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND   93 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence            57889999999999999999999875   467899999986432    234577899999998 6999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceeeC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFG  162 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~~  162 (397)
                      ++|+|||||+ |+|.+.+.    .+++..++.|++||+.||+|||++||+||||||+||||+.+ +.+||+|||+|+...
T Consensus        94 ~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           94 HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred             EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence            9999999998 58888774    38999999999999999999999999999999999999877 899999999998654


Q ss_pred             CCC----------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCC-C
Q 015948          163 SPD----------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFL-Q  213 (397)
Q Consensus       163 ~~~----------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf-~  213 (397)
                      ...                            ...+..+||++|||||++.+...|+.++||||+||++|||++|++|| .
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            322                            12345689999999999988777999999999999999999999766 6


Q ss_pred             CCCcHHHHHHHHHHhCCCCCC--------------CCCCCC--CCcccc----------ccccccCCCccccCCCCCHHH
Q 015948          214 GSSDIDQLGKIFAAFGTATPS--------------QWPDLA--YLPDYV----------EYQYVAAPPLRSLFPSASDDA  267 (397)
Q Consensus       214 ~~~~~~~~~~i~~~~~~~~~~--------------~~~~~~--~~~~~~----------~~~~~~~~~~~~~~~~~s~~~  267 (397)
                      +.++.+++..|+..+|.....              ..+...  ......          .............+..+|+++
T Consensus       250 ~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a  329 (361)
T 4f9c_A          250 ASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEA  329 (361)
T ss_dssp             CSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHH
T ss_pred             CCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHH
Confidence            677788999988876642110              000000  000000          000000011123356789999


Q ss_pred             HHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          268 LDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       268 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      +|||.+||++||++|+|++|+|+||||++.+
T Consensus       330 ~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          330 YDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             HHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            9999999999999999999999999998754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.7e-61  Score=448.65  Aligned_cols=260  Identities=25%  Similarity=0.400  Sum_probs=198.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC------
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG------   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~------   84 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++..... +.....+.+|+.+|++|+|||||+++++|.+.+      
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~   82 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ   82 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred             chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence            4679999999999999999999999999999999976542 223346789999999999999999999986544      


Q ss_pred             ------eEEEEEEccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeee
Q 015948           85 ------NLHLVFEFME-TDLETVIRNTNI--FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF  155 (397)
Q Consensus        85 ------~~~lv~e~~~-g~L~~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DF  155 (397)
                            ++|+|||||. |+|.+++.....  ..++..++.|+.||+.||+|||++||+||||||+||||+.+|.+||+||
T Consensus        83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DF  162 (299)
T 4g31_A           83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF  162 (299)
T ss_dssp             ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccC
Confidence                  4799999998 588888876532  2456678999999999999999999999999999999999999999999


Q ss_pred             ccceeeCCCCC------------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015948          156 GLARIFGSPDR------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGK  223 (397)
Q Consensus       156 G~a~~~~~~~~------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  223 (397)
                      |+|+.+.....            ..+..+||+.|||||++.+ ..|+.++|||||||+||||++   ||.+.  .+....
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyell~---Pf~~~--~~~~~~  236 (299)
T 4g31_A          163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLY---PFSTQ--MERVRT  236 (299)
T ss_dssp             CCC--------------------------CCCTTSCHHHHTT-CCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHH
T ss_pred             ccceecCCCccccccccccccccccCCcccCccccCHHHHcC-CCCCCHHHHHHHHHHHHHHcc---CCCCc--cHHHHH
Confidence            99987644321            2345689999999999987 679999999999999999996   56432  222222


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                      +........                        ...++..++.+++||.+||+.||++|||+.|+|+||||++..++.
T Consensus       237 ~~~~~~~~~------------------------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p~  290 (299)
T 4g31_A          237 LTDVRNLKF------------------------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPG  290 (299)
T ss_dssp             HHHHHTTCC------------------------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC----
T ss_pred             HHHHhcCCC------------------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCCC
Confidence            222211111                        111223367889999999999999999999999999999876543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.9e-61  Score=482.68  Aligned_cols=269  Identities=28%  Similarity=0.462  Sum_probs=235.9

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .+.++|++.+.||+|+||+||+|+++.+|+.||||++......  ....+.+|+.+|+.|+|||||+++++|++++.+||
T Consensus       154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~--~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  231 (573)
T 3uto_A          154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM  231 (573)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH--HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred             cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchh--hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            4678999999999999999999999999999999999764322  23457789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC--CcEEEeeeccceeeCCCC
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPD  165 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~--~~~kl~DFG~a~~~~~~~  165 (397)
                      |||||. |+|.+++.+....+++..++.|++||+.||+|||++||+||||||+|||++.+  |.+||+|||+|+.+.. .
T Consensus       232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~-~  310 (573)
T 3uto_A          232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-K  310 (573)
T ss_dssp             EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT-T
T ss_pred             EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC-C
Confidence            999998 58999998777779999999999999999999999999999999999999854  8999999999998754 3


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......+||++|||||++.+ ..|+.++|||||||++|||++|.+||.+.+..+.+..|........             
T Consensus       311 ~~~~~~~GT~~y~APEv~~~-~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------  376 (573)
T 3uto_A          311 QSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD-------------  376 (573)
T ss_dssp             SEEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC-------------
T ss_pred             CceeeeEECccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCC-------------
Confidence            44566789999999999987 6799999999999999999999999999998888888765421111             


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNK  305 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~  305 (397)
                                 ...++.+|+++++||.+||+.||.+|||++|+|+||||+...++.....
T Consensus       377 -----------~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~~~~~  425 (573)
T 3uto_A          377 -----------DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQ  425 (573)
T ss_dssp             -----------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTTTTCE
T ss_pred             -----------cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCCCchhh
Confidence                       2334567999999999999999999999999999999998777665443

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=8.9e-61  Score=479.78  Aligned_cols=261  Identities=25%  Similarity=0.403  Sum_probs=218.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHH---HHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALR---EIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~---E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ..++|++.++||+|+||+||+|+++.+|+.||||++.+..... .....+.+   ++.+++.++|||||+++++|++.++
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence            3678999999999999999999999999999999998654222 22222333   4666777899999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|||||||. |+|..++.+.+ .+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.+...
T Consensus       267 lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          267 LSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence            999999998 58988887654 5999999999999999999999999999999999999999999999999999987543


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH--H-HHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI--D-QLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~-~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                        ...+.+||+.|||||++.+...|+.++||||||||+|||++|.+||.+.+..  . ....+...    .         
T Consensus       346 --~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~----~---------  410 (689)
T 3v5w_A          346 --KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM----A---------  410 (689)
T ss_dssp             --CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC----C---------
T ss_pred             --CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC----C---------
Confidence              3456799999999999976567999999999999999999999999875432  2 22222221    0         


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPT  301 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~  301 (397)
                                     ..++..+|+++++||.+||+.||.+|++     ++||++||||++..|..
T Consensus       411 ---------------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~  460 (689)
T 3v5w_A          411 ---------------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQM  460 (689)
T ss_dssp             ---------------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHH
T ss_pred             ---------------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHH
Confidence                           0122356999999999999999999998     79999999999987643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=5.6e-60  Score=438.09  Aligned_cols=254  Identities=21%  Similarity=0.298  Sum_probs=209.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+++++.+.||+|+||+||+|++.   ..||||+++...........+.+|+.+|++++|||||++++++.+ +.+||||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm  110 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT  110 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence            467889999999999999999754   369999987655444445578899999999999999999998854 5689999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC--CCc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP--DRR  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~--~~~  167 (397)
                      |||+ |+|.+++......+++..+..|+.||+.||+|||++|||||||||+||||+.++++||+|||+|+.....  ...
T Consensus       111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~  190 (307)
T 3omv_A          111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ  190 (307)
T ss_dssp             ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred             EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence            9998 6899999887778999999999999999999999999999999999999999999999999999876432  233


Q ss_pred             ccccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 FTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ....+||+.|||||++.+.  ..|+.++|||||||+||||+||++||.+.++...+..+.....                
T Consensus       191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~----------------  254 (307)
T 3omv_A          191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY----------------  254 (307)
T ss_dssp             ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTC----------------
T ss_pred             ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCC----------------
Confidence            4567899999999999642  3589999999999999999999999998887766665544211                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                            ..+......+.+++++.+||.+||+.||++|||+.|+++
T Consensus       255 ------~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          255 ------ASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             ------CCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             ------CCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                  111223344567899999999999999999999998754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=7.4e-59  Score=435.20  Aligned_cols=293  Identities=48%  Similarity=0.877  Sum_probs=254.4

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ...+.+.++|++.+.||+|+||+||+|++. +|+.||+|++............+.+|+.+++.++||||+++++++.+++
T Consensus        14 ~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   92 (311)
T 3niz_A           14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER   92 (311)
T ss_dssp             -CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS
T ss_pred             eeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC
Confidence            346678999999999999999999999985 5899999999766555544566789999999999999999999999999


Q ss_pred             eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .+|+|||||+|+|...+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        93 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  172 (311)
T 3niz_A           93 CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP  172 (311)
T ss_dssp             CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred             EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence            99999999999999999988778999999999999999999999999999999999999999999999999999987766


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      .......++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.++.+.+..+...++...+..|+....++.
T Consensus       173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  252 (311)
T 3niz_A          173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL  252 (311)
T ss_dssp             CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred             cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence            66667778899999999998767799999999999999999999999999999999999999999999988887665544


Q ss_pred             ccc--cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          245 YVE--YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       245 ~~~--~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      +..  +......++....+.+++++++||.+||+.||++|||++|+|+||||++..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence            332  222334455667788899999999999999999999999999999998753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=3.2e-58  Score=426.86  Aligned_cols=287  Identities=47%  Similarity=0.821  Sum_probs=253.9

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++............+.+|+.++++++||||+++++++.+++.+|+|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            68999999999999999999999999999999998776555555678899999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ||+|+++..+...+..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  161 (292)
T 3o0g_A           82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE  161 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred             cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence            99999999998877889999999999999999999999999999999999999999999999999999887666666777


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCC-CCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      .+|+.|+|||++.+...++.++|||||||++|+|++|. |+|.+.+..+.+..++...+......|+.....+++..+..
T Consensus       162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (292)
T 3o0g_A          162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM  241 (292)
T ss_dssp             CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred             ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccccc
Confidence            88999999999987666899999999999999999755 66888888899999999999999888887766555443322


Q ss_pred             c-cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          251 V-AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       251 ~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      . .........+.++.++++||.+||+.||++|||++|+|+||||++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             ccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            2 12234455667899999999999999999999999999999998754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.5e-59  Score=433.52  Aligned_cols=250  Identities=22%  Similarity=0.347  Sum_probs=211.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|++.+.||+|+||+||+|++.     .++..||||+++...  ......+.+|+++|++|+|||||+++++|.+++.
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~   89 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   89 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            578999999999999999999875     357889999997532  2234568899999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEE
Q 015948           86 LHLVFEFME-TDLETVIRNTN------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKL  152 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl  152 (397)
                      +|||||||+ |+|.+++.+.+            ..+++..+..|+.||+.||.|||+++|+||||||+||||+.++.+||
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEE
Confidence            999999998 79999987642            46999999999999999999999999999999999999999999999


Q ss_pred             eeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhC
Q 015948          153 ADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFG  229 (397)
Q Consensus       153 ~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~  229 (397)
                      +|||+|+.......  ......||+.|||||++.+ ..|+.++|||||||+||||+| |++||.+.+..+.+..+.....
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~  248 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV  248 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCC
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC
Confidence            99999987644332  2234568999999999976 569999999999999999998 8999999988888877765421


Q ss_pred             CCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .                           ..+..+++++.+||.+||+.||++|||++|+++
T Consensus       249 ~---------------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~  282 (299)
T 4asz_A          249 L---------------------------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT  282 (299)
T ss_dssp             C---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             C---------------------------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            1                           112345899999999999999999999999853

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.7e-58  Score=433.54  Aligned_cols=251  Identities=21%  Similarity=0.336  Sum_probs=207.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|.+.++||+|+||+||+|++.     .++..||||+++...  ......+.+|+.+|++|+|||||+++++|.+.+.
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~  117 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP  117 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            467999999999999999999865     367899999986432  2234568899999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948           86 LHLVFEFME-TDLETVIRNTN--------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~--------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      +|||||||+ |+|.+++.+..              .++++..+..|+.||+.||.|||+++|+||||||+||||+.++.+
T Consensus       118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcE
Confidence            999999998 68999887642              358999999999999999999999999999999999999999999


Q ss_pred             EEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948          151 KLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA  227 (397)
Q Consensus       151 kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~  227 (397)
                      ||+|||+|+......  ......+||+.|||||++.+ ..|+.++|||||||+||||+| |++||.+.+..+.+..+...
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g  276 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG  276 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            999999998764433  23345678999999999977 669999999999999999998 89999999888888777654


Q ss_pred             hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ....                           .+..+++++.+|+.+||+.||++|||++|++++
T Consensus       277 ~~~~---------------------------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          277 RELE---------------------------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCCC---------------------------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             CCCC---------------------------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            2111                           123458999999999999999999999999864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.2e-57  Score=422.30  Aligned_cols=284  Identities=47%  Similarity=0.863  Sum_probs=244.9

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||+||+|++ .+|+.||+|++............+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            6899999999999999999998 678999999998766555555678899999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      |++|+|...+......+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++............
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (288)
T 1ob3_A           81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE  160 (288)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             ecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccc
Confidence            99999999998877779999999999999999999999999999999999999999999999999998876555555667


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-ccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQY  250 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~  250 (397)
                      .+|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..++..++......|+.....+.+.. +..
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T 1ob3_A          161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV  240 (288)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred             cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence            8899999999997766799999999999999999999999999999999999999999888888876654443221 122


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ....++......+++++++||.+||+.||++|||++|+++||||++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            2233455566788999999999999999999999999999999975

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.7e-58  Score=428.35  Aligned_cols=253  Identities=20%  Similarity=0.288  Sum_probs=213.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      -.+.+++.+.||+|+||+||+|+..     .+++.||||+++... .......+.+|+.+|++++|||||++++++.+++
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  102 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ  102 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence            3567899999999999999999853     467899999987543 2334457889999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG  148 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~  148 (397)
                      .+|||||||+ |+|.+++....               ..+++..+..|+.||+.||.|||+++||||||||+||||+.++
T Consensus       103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCC
Confidence            9999999998 79999986532               3589999999999999999999999999999999999999999


Q ss_pred             cEEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015948          149 QLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIF  225 (397)
Q Consensus       149 ~~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~  225 (397)
                      ++||+|||+|+......  ...+..+||+.|||||++.+ ..|+.++|||||||+||||+| |.+||.+.+..+.+..+.
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~  261 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR  261 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999998764322  23455678999999999976 569999999999999999998 899999998887777665


Q ss_pred             HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .....                           ..++.+++++.+|+.+||+.||++|||+.||+++
T Consensus       262 ~~~~~---------------------------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          262 NRQVL---------------------------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             TTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCC---------------------------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            43111                           1123458999999999999999999999999874

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-57  Score=433.41  Aligned_cols=295  Identities=59%  Similarity=1.035  Sum_probs=257.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ..++|.+.+.||+|+||+||+|++..+|+.||||++......   ......+.+|+.+++.++||||++++++|.+.+.+
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            468999999999999999999999999999999999764322   22344678999999999999999999999999999


Q ss_pred             EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      |+||||++|+|...+......+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.......
T Consensus        88 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  167 (346)
T 1ua2_A           88 SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR  167 (346)
T ss_dssp             EEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred             EEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc
Confidence            99999999999999988777799999999999999999999999999999999999999999999999999998766666


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..++...+......|++...++++.
T Consensus       168 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  247 (346)
T 1ua2_A          168 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV  247 (346)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred             cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccc
Confidence            66677899999999999776678999999999999999999999999999999999999999999999999888887776


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN  304 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~  304 (397)
                      .+......+...+++.+++++++||.+||..||.+|||++|+|+||||++.+.+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~~~~~  305 (346)
T 1ua2_A          248 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC  305 (346)
T ss_dssp             CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCCCSS
T ss_pred             cccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCCCCCcc
Confidence            6655555566677788999999999999999999999999999999999876655433

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.5e-57  Score=424.90  Aligned_cols=287  Identities=39%  Similarity=0.744  Sum_probs=240.7

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||+||+|++..+++.||+|++....... ....+.+|+.+|+.++||||+++++++.+.+.+|+|||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   80 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc-cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence            68999999999999999999999999999999997544322 22234579999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      |++|+|.+.+...+..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  160 (324)
T 3mtl_A           81 YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE  160 (324)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccc
Confidence            99999999999887789999999999999999999999999999999999999999999999999998776555556667


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc-
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY-  250 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-  250 (397)
                      ++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++.+....|+..........+.+ 
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (324)
T 3mtl_A          161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP  240 (324)
T ss_dssp             --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCC
T ss_pred             cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccc
Confidence            8899999999998767799999999999999999999999999999999999999999999888886644433322222 


Q ss_pred             -ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          251 -VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       251 -~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                       ..........+.+++++++||.+||+.||++|||++|+|+||||.+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             cccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence             1222334556778999999999999999999999999999999987543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=3.1e-56  Score=418.54  Aligned_cols=288  Identities=40%  Similarity=0.739  Sum_probs=231.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|++..+|+.||+|++..... ......+.+|+.+++.++||||+++++++.+++.+|+||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            5789999999999999999999999999999999976542 233456789999999999999999999999999999999


Q ss_pred             EccccCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           91 EFMETDLETVIRNTN-----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        91 e~~~g~L~~~~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ||++|+|.+++....     ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus        83 e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  162 (317)
T 2pmi_A           83 EFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV  162 (317)
T ss_dssp             ECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred             EecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence            999999999887642     358999999999999999999999999999999999999999999999999999876555


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..++...+......|+.....+.+
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  242 (317)
T 2pmi_A          163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY  242 (317)
T ss_dssp             CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred             ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence            55666788999999999987667899999999999999999999999999999999999999998887777765444332


Q ss_pred             ccccc-ccCCCc-----cccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          246 VEYQY-VAAPPL-----RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       246 ~~~~~-~~~~~~-----~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ..... .....+     ......++.++++||.+||+.||++|||++|+|+||||.....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence            11100 000011     1122357899999999999999999999999999999987543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.7e-56  Score=422.52  Aligned_cols=292  Identities=47%  Similarity=0.808  Sum_probs=235.6

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .....++|++.+.||+|+||+||+|++..+++.||||++............+.+|+.+|+.++||||+++++++.+++.+
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL  108 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence            44568899999999999999999999999999999999976655554455677899999999999999999999999999


Q ss_pred             EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc-----cCCcEEEeeeccceee
Q 015948           87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-----SHGQLKLADFGLARIF  161 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~-----~~~~~kl~DFG~a~~~  161 (397)
                      |+||||++|+|.+++.... .+++..++.++.||+.||.|||++||+||||||+||||+     .++.+||+|||+++..
T Consensus       109 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          109 HLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             EEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             EEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence            9999999999999988754 499999999999999999999999999999999999995     4456999999999887


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ..........++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..++..++.+....|+....
T Consensus       188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (329)
T 3gbz_A          188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA  267 (329)
T ss_dssp             C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence            66555666778899999999998766789999999999999999999999999999999999999999888888876655


Q ss_pred             Cccccccc-cccCCCcc-ccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          242 LPDYVEYQ-YVAAPPLR-SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       242 ~~~~~~~~-~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      .+.+.... ......+. .+...+++++++||.+||+.||++|||++|+|+||||++..+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred             hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence            44332110 00111111 112236899999999999999999999999999999998654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1e-56  Score=442.79  Aligned_cols=292  Identities=36%  Similarity=0.634  Sum_probs=225.2

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee-----cC
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-----HK   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-----~~   83 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|+.++||||++++++|.     ..
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  129 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF  129 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence            4578999999999999999999999999999999999765443334456789999999999999999999983     34


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ..+|+||||++|+|...+... ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+....
T Consensus       130 ~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  208 (458)
T 3rp9_A          130 DELYVVLEIADSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY  208 (458)
T ss_dssp             CCEEEEECCCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred             ceEEEEEeccccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence            679999999999999998764 4599999999999999999999999999999999999999999999999999987643


Q ss_pred             CC---------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh---------
Q 015948          164 PD---------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN---------  207 (397)
Q Consensus       164 ~~---------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~---------  207 (397)
                      ..                           ...+..+||++|+|||++.....|+.++||||||||||||++         
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~  288 (458)
T 3rp9_A          209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH  288 (458)
T ss_dssp             CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred             ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence            21                           134566889999999988666779999999999999999998         


Q ss_pred             --CCCCCCCCC--------------------cHHHHHHHHHHhCCCCCCCCCCCCCCccc---cccccccCCCccccCCC
Q 015948          208 --RRPFLQGSS--------------------DIDQLGKIFAAFGTATPSQWPDLAYLPDY---VEYQYVAAPPLRSLFPS  262 (397)
Q Consensus       208 --g~~pf~~~~--------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  262 (397)
                        |.++|.+.+                    ..+++..|+..+|.+....+.........   ..+.......+...++.
T Consensus       289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (458)
T 3rp9_A          289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA  368 (458)
T ss_dssp             GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred             ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence              888888765                    36778888888887654433221110000   00111223345566788


Q ss_pred             CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          263 ASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       263 ~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                      +++++++||.+||.+||++|||++|+|+||||.+..++.
T Consensus       369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~  407 (458)
T 3rp9_A          369 SSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAE  407 (458)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGG
T ss_pred             CCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCc
Confidence            899999999999999999999999999999999876543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-55  Score=412.00  Aligned_cols=289  Identities=38%  Similarity=0.723  Sum_probs=240.8

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---cCCccchHHHHHHHHHhcC---CCCeeEEEee
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELK---SPHIIELIDA   79 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~   79 (397)
                      ++..+.++|++.+.||+|+||+||+|++..+|+.||||++.....   .........+|+.+++.++   ||||++++++
T Consensus         3 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~   82 (308)
T 3g33_A            3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV   82 (308)
T ss_dssp             -------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             CCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence            456678999999999999999999999999999999999975442   2223345667888887775   9999999999


Q ss_pred             eecCC-----eEEEEEEccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEe
Q 015948           80 FPHKG-----NLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLA  153 (397)
Q Consensus        80 ~~~~~-----~~~lv~e~~~g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~  153 (397)
                      |....     .+|+||||++|+|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           83 CATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             EEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred             eeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEe
Confidence            97655     5899999999999999887643 39999999999999999999999999999999999999999999999


Q ss_pred             eeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948          154 DFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP  233 (397)
Q Consensus       154 DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  233 (397)
                      |||+++.... .......++|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..++..++....
T Consensus       163 Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  240 (308)
T 3g33_A          163 DFGLARIYSY-QMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE  240 (308)
T ss_dssp             SCSCTTTSTT-CCCSGGGGCCCSSCCHHHHHT-SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             eCccccccCC-CcccCCccccccccCchHHcC-CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            9999987643 333456778999999999977 56899999999999999999999999999999999999999999988


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      ..|+.....+.. .+......+.....+.+++++.+||.+||+.||++|||++|+|+||||+..
T Consensus       241 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          241 DDWPRDVSLPRG-AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             TTSCSSCSSCGG-GSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             hhccchhhcccc-ccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            888876555432 222233345566778899999999999999999999999999999999864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.4e-56  Score=423.87  Aligned_cols=253  Identities=24%  Similarity=0.377  Sum_probs=208.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhcCC-CCeeEEEeeeec-C
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELIDAFPH-K   83 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~-~   83 (397)
                      .++|++.+.||+|+||+||+|.+..+     ++.||||++...... .....+.+|+.+|++++| ||||+++++|.+ +
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~-~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~  141 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPG  141 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh-HHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence            47899999999999999999987654     367999998754332 223467899999999976 899999999865 5


Q ss_pred             CeEEEEEEccc-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC
Q 015948           84 GNLHLVFEFME-TDLETVIRNT---------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH  147 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~---------------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~  147 (397)
                      +.+|||||||+ |+|.+++++.               ...+++..+..|+.||+.||+|||+++||||||||+||||+.+
T Consensus       142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~  221 (353)
T 4ase_A          142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK  221 (353)
T ss_dssp             SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC
Confidence            67999999998 7999998753               2348999999999999999999999999999999999999999


Q ss_pred             CcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 015948          148 GQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKI  224 (397)
Q Consensus       148 ~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i  224 (397)
                      +.+||+|||+|+.+.....  .....+||+.|||||++.+ ..|+.++|||||||+||||+| |.+||.+.+..+.+..+
T Consensus       222 ~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~  300 (353)
T 4ase_A          222 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  300 (353)
T ss_dssp             GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred             CCEEECcchhhhhcccCCCceeeccccccccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            9999999999987644332  3345678999999999987 679999999999999999998 89999987654444443


Q ss_pred             HHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          225 FAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      +..-...                          ..+..+++++.+||.+||+.||++|||+.||++|
T Consensus       301 i~~g~~~--------------------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          301 LKEGTRM--------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCC--------------------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            3321110                          1122458999999999999999999999999987

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.4e-56  Score=432.59  Aligned_cols=291  Identities=35%  Similarity=0.629  Sum_probs=226.7

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecC-
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK-   83 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~-   83 (397)
                      +...+.++|++.+.||+|+||+||+|.+..+|+.||||++............+.+|+.+|+.+. ||||++++++|... 
T Consensus         3 v~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~   82 (388)
T 3oz6_A            3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN   82 (388)
T ss_dssp             -CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT
T ss_pred             ccCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC
Confidence            4567899999999999999999999999999999999999765444444556778999999997 99999999999654 


Q ss_pred             -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                       ..+|+|||||+|+|...+...  .+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.+.
T Consensus        83 ~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A           83 DRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             SSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             CCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence             479999999999999998864  48999999999999999999999999999999999999999999999999998753


Q ss_pred             CC---------------------CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015948          163 SP---------------------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL  221 (397)
Q Consensus       163 ~~---------------------~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~  221 (397)
                      ..                     ....+..+||++|+|||++.+...|+.++|||||||++|||++|++||.+.+..+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~  240 (388)
T 3oz6_A          161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL  240 (388)
T ss_dssp             SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            31                     122445689999999999987678999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCcc--cc----ccccccCCCcccc-------------CCCCCHHHHHHHHHhcCcCCCCC
Q 015948          222 GKIFAAFGTATPSQWPDLAYLPD--YV----EYQYVAAPPLRSL-------------FPSASDDALDLLSKMFTYDPKAR  282 (397)
Q Consensus       222 ~~i~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~-------------~~~~s~~~~~li~~~L~~dP~~R  282 (397)
                      ..++..++.+....+........  ..    .............             ...+++++++||.+||+.||++|
T Consensus       241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R  320 (388)
T 3oz6_A          241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR  320 (388)
T ss_dssp             HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred             HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence            99998887665432211110000  00    0000000111111             12678999999999999999999


Q ss_pred             CCHHHHhcCCCCCCCC
Q 015948          283 ITAQQALEHRYFSSAP  298 (397)
Q Consensus       283 ~t~~e~l~hp~~~~~~  298 (397)
                      ||++|+|+||||+...
T Consensus       321 ~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          321 ISANDALKHPFVSIFH  336 (388)
T ss_dssp             CCHHHHTTSTTTTTTC
T ss_pred             CCHHHHhCCHHHHHhc
Confidence            9999999999998654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2e-55  Score=414.72  Aligned_cols=261  Identities=25%  Similarity=0.408  Sum_probs=227.4

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ....++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus        11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   90 (328)
T 3fe3_A           11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY   90 (328)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence            34578899999999999999999999999999999999876544444556789999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||++ |+|.+.+...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... .
T Consensus        91 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~  168 (328)
T 3fe3_A           91 LIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-G  168 (328)
T ss_dssp             EEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-C
T ss_pred             EEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-C
Confidence            9999997 58888887654 4999999999999999999999999999999999999999999999999999876443 3


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+||++|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+....+.....                 
T Consensus       169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----------------  231 (328)
T 3fe3_A          169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----------------  231 (328)
T ss_dssp             GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----------------
T ss_pred             ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----------------
Confidence            456678999999999998855556899999999999999999999999887777777655311                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                 .....+++++.+||.+||..||.+|||++|+++||||....
T Consensus       232 -----------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          232 -----------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             -----------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence                       11123589999999999999999999999999999998643

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=5.6e-56  Score=434.10  Aligned_cols=293  Identities=38%  Similarity=0.634  Sum_probs=238.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----   83 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|+.++||||+++++++...     
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            468899999999999999999999999999999999976544433445678999999999999999999999766     


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ..+|+||||++|+|...+... ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+....
T Consensus       103 ~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          103 DELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             CCEEEEEECCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             CeEEEEEecCCcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            579999999999999998764 4599999999999999999999999999999999999999999999999999987654


Q ss_pred             CC----------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-----------CCC
Q 015948          164 PD----------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-----------RRP  210 (397)
Q Consensus       164 ~~----------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-----------g~~  210 (397)
                      ..                      ...+..+||++|+|||++.....|+.++|||||||++|||++           |.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p  261 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP  261 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence            32                      124677899999999998666779999999999999999997           677


Q ss_pred             CCCCCC-----------------cHHHHHHHHHHhCCCCCCCCCCCCCCcc---ccccccccCCCccccCCCCCHHHHHH
Q 015948          211 FLQGSS-----------------DIDQLGKIFAAFGTATPSQWPDLAYLPD---YVEYQYVAAPPLRSLFPSASDDALDL  270 (397)
Q Consensus       211 pf~~~~-----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~l  270 (397)
                      +|.+.+                 ..+++..|+..+|.+....+........   ...........+...++.+++++++|
T Consensus       262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL  341 (432)
T 3n9x_A          262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL  341 (432)
T ss_dssp             SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred             cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence            787765                 3678888999888766543322111000   00111122334455678899999999


Q ss_pred             HHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCC
Q 015948          271 LSKMFTYDPKARITAQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       271 i~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~  302 (397)
                      |.+||+.||++|||++|+|+||||.+...+..
T Consensus       342 l~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~  373 (432)
T 3n9x_A          342 LESMLKFNPNKRITIDQALDHPYLKDVRKKKL  373 (432)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTT
T ss_pred             HHHHhcCCcccCCCHHHHhcChhhhhccCccc
Confidence            99999999999999999999999998766543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=2.9e-55  Score=417.62  Aligned_cols=292  Identities=42%  Similarity=0.749  Sum_probs=246.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-------   82 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-------   82 (397)
                      ..++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+++.++||||+++++++..       
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            3689999999999999999999999999999999998766655556678899999999999999999999876       


Q ss_pred             -CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           83 -KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        83 -~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                       .+.+|+|||||+|+|...+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+
T Consensus        95 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A           95 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             --CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence             4579999999999999999887778999999999999999999999999999999999999999999999999999876


Q ss_pred             CCC----CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          162 GSP----DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       162 ~~~----~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      ...    .......+||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+...+..|+
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  254 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP  254 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            422    2334556789999999999876778999999999999999999999999999999999999999988888887


Q ss_pred             CCCCCccccccccccCC--CccccC--CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAP--PLRSLF--PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~--~~~~~~--~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                      .................  ......  ...++++++||.+||+.||++|||++|+|+||||.+.+.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  322 (351)
T 3mi9_A          255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS  322 (351)
T ss_dssp             TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCC
T ss_pred             ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCcc
Confidence            65433222111111100  000000  01368899999999999999999999999999998766544

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.3e-55  Score=419.98  Aligned_cols=261  Identities=26%  Similarity=0.373  Sum_probs=221.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   87 (397)
                      -.++|++.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.+|+.+ +||||++++++|.+.+.+|
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            36889999999999999999999999999999999976432 223344567899999988 7999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +|||||. |+|...+.+.. .+++..++.|+.||+.||.|||++||+||||||+||||+.+|++||+|||+|+.......
T Consensus       101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~  179 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV  179 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred             EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence            9999998 58888877654 599999999999999999999999999999999999999999999999999987555555


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+..+.+..+.....                 
T Consensus       180 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-----------------  241 (353)
T 3txo_A          180 TTATFCGTPDYIAPEILQE-MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-----------------  241 (353)
T ss_dssp             ------CCGGGCCHHHHHH-HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----------------
T ss_pred             cccccCCCcCeEChhhcCC-CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----------------
Confidence            5667789999999999976 5689999999999999999999999999988888888766311                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH------HHHhcCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA------QQALEHRYFSSAPLP  300 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~------~e~l~hp~~~~~~~~  300 (397)
                                 .+...+++++.+||.+||+.||.+||++      +|+++||||.+..|.
T Consensus       242 -----------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~  290 (353)
T 3txo_A          242 -----------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWA  290 (353)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHH
T ss_pred             -----------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHH
Confidence                       1112358999999999999999999998      899999999987654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.9e-55  Score=409.48  Aligned_cols=291  Identities=40%  Similarity=0.661  Sum_probs=230.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus         1 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             --CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence            46899999999999999999999999999999999876554444445677899999999999999999999999999999


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |||++|+++..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD  160 (311)
T ss_dssp             EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred             EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence            99999877766666666799999999999999999999999999999999999999999999999999998765555566


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC---Ccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY---LPDYV  246 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~  246 (397)
                      ..++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++...+..+.....   .....
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (311)
T 4agu_A          161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK  240 (311)
T ss_dssp             -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred             CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence            678899999999998767789999999999999999999999999999988888887766543321100000   00000


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      .............++.++.++.+||.+||+.||.+|||++|+++||||++....
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  294 (311)
T 4agu_A          241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI  294 (311)
T ss_dssp             CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC--
T ss_pred             CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCH
Confidence            000011122334456789999999999999999999999999999999976543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=5.9e-55  Score=412.77  Aligned_cols=260  Identities=25%  Similarity=0.376  Sum_probs=226.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.+|+.++||||++++++|.+.+.+|+|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            5789999999999999999999999999999999976432 223344677899999999999999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||++| +|...+.+. ..+++..++.++.||+.||.|||++||+||||||+||||+.+|++||+|||+++.........
T Consensus        84 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~  162 (337)
T 1o6l_A           84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM  162 (337)
T ss_dssp             EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred             EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence            999985 787777654 359999999999999999999999999999999999999999999999999998755555556


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+.......+.....                   
T Consensus       163 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-------------------  222 (337)
T 1o6l_A          163 KTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------------------  222 (337)
T ss_dssp             CCCEECGGGCCGGGGSS-SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-------------------
T ss_pred             cccccChhhCChhhhcC-CCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------
Confidence            67789999999999976 5689999999999999999999999998877776666654210                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP  300 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~  300 (397)
                               .+...+++++++||.+||+.||.+||     +++|+++||||.+..|.
T Consensus       223 ---------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~  270 (337)
T 1o6l_A          223 ---------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ  270 (337)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred             ---------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHH
Confidence                     11234589999999999999999999     89999999999987653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.7e-54  Score=417.22  Aligned_cols=260  Identities=23%  Similarity=0.353  Sum_probs=219.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .++|.+.+.||+|+||+||+|+++.+++.||+|++.+.... ......+.+|+.+|.++ +||||++++++|.+.+.+|+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            67899999999999999999999999999999999875432 23344577899999887 89999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||||. |+|...+.+.. .+++..++.|+.||+.||.|||++||+||||||+||||+.+|++||+|||+|+........
T Consensus       131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~  209 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT  209 (396)
T ss_dssp             EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred             EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCc
Confidence            999998 47887777644 5999999999999999999999999999999999999999999999999999875555556


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--------HH-HHHHHHHHhCCCCCCCCCC
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--------ID-QLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--------~~-~~~~i~~~~~~~~~~~~~~  238 (397)
                      ....+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+...        .+ ....+... .         
T Consensus       210 ~~~~~gt~~Y~aPE~l~~-~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-~---------  278 (396)
T 4dc2_A          210 TSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-Q---------  278 (396)
T ss_dssp             BCCCCBCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC-C---------
T ss_pred             cccccCCcccCCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc-c---------
Confidence            677889999999999977 6789999999999999999999999975321        12 22222221 0         


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH------HHHhcCCCCCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA------QQALEHRYFSSAPLP  300 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~------~e~l~hp~~~~~~~~  300 (397)
                                        ..+...+|.++++||.+||+.||.+|+++      +|+++||||.+..|.
T Consensus       279 ------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~  328 (396)
T 4dc2_A          279 ------------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD  328 (396)
T ss_dssp             ------------------CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHH
T ss_pred             ------------------cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHH
Confidence                              01223468999999999999999999985      899999999987654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1e-54  Score=414.74  Aligned_cols=265  Identities=27%  Similarity=0.433  Sum_probs=228.3

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC----ccchHHHHHHHHHhcCCCCeeEEEeeeec
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----VNFTALREIKLLKELKSPHIIELIDAFPH   82 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~l~~~~~~   82 (397)
                      ...+.++|.+.+.||+|+||+||+|+++.+|+.||+|++.+......    ....+.+|+.+|+.++||||++++++|.+
T Consensus         7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~   86 (361)
T 2yab_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN   86 (361)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe
Confidence            45678999999999999999999999999999999999987653322    23457899999999999999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC----cEEEeeecc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGL  157 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~----~~kl~DFG~  157 (397)
                      .+.+|+|||||. |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||+
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~  165 (361)
T 2yab_A           87 RTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred             CCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence            999999999997 688888765 44699999999999999999999999999999999999998877    799999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      +...... ......+||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+..+.+..+.......      
T Consensus       166 a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~------  237 (361)
T 2yab_A          166 AHEIEDG-VEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF------  237 (361)
T ss_dssp             CEECCTT-CCCCCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC------
T ss_pred             ceEcCCC-CccccCCCCccEECchHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------
Confidence            9887543 33456779999999999976 568999999999999999999999999988887777765431110      


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                        ....++.+|+++++||.+||..||.+|||++|+++||||....
T Consensus       238 ------------------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          238 ------------------DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             ------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             ------------------CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence                              0123456789999999999999999999999999999998643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.3e-54  Score=424.67  Aligned_cols=264  Identities=30%  Similarity=0.453  Sum_probs=229.6

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ...+.++|++.+.||+|+||+||+|.+..+|+.||+|++............+.+|+.+++.++||||++++++|.+++.+
T Consensus         6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   85 (444)
T 3soa_A            6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH   85 (444)
T ss_dssp             -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred             cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence            45678999999999999999999999999999999999987655444455678999999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc---cCCcEEEeeeccceeeC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG---SHGQLKLADFGLARIFG  162 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~---~~~~~kl~DFG~a~~~~  162 (397)
                      |+|||||. |+|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++....
T Consensus        86 ~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           86 YLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             EEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            99999998 58888887654 599999999999999999999999999999999999998   45789999999998876


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .........+||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+..+.+..+..........        
T Consensus       165 ~~~~~~~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~--------  235 (444)
T 3soa_A          165 GEQQAWFGFAGTPGYLSPEVLRK-DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSP--------  235 (444)
T ss_dssp             TTCCBCCCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTT--------
T ss_pred             CCCceeecccCCcccCCHHHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcc--------
Confidence            66656667789999999999976 568999999999999999999999999988888887776653322222        


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                      .++.+++++++||.+||+.||.+|||++|+|+||||+.
T Consensus       236 ----------------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          236 ----------------EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             ----------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             ----------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence                            22456899999999999999999999999999999964

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.4e-55  Score=434.48  Aligned_cols=284  Identities=35%  Similarity=0.571  Sum_probs=227.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----   83 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|+.++||||++++++|...     
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence            457899999999999999999999999999999999986544444455678999999999999999999999554     


Q ss_pred             -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                       ..+|+||||++|+|...+..   .+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+...
T Consensus       139 ~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          139 FQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  215 (464)
T ss_dssp             CCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred             CCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence             46899999999999888754   38999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      . .......+||++|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+++..|++.++.+.+..+......
T Consensus       216 ~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~  293 (464)
T 3ttj_A          216 T-SFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT  293 (464)
T ss_dssp             --CCCC----CCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHH
T ss_pred             C-CcccCCCcccccccCHHHHcC-CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchh
Confidence            4 334556789999999999987 57999999999999999999999999999999999999999988766544332100


Q ss_pred             cc-cccc-ccccCCCccccCCC------------CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 PD-YVEY-QYVAAPPLRSLFPS------------ASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 ~~-~~~~-~~~~~~~~~~~~~~------------~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      .. +... .......+...++.            .++++++||.+||+.||++|||++|+|+||||...
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             HHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             hhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence            00 0000 00000111111111            15789999999999999999999999999999854

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.5e-55  Score=418.72  Aligned_cols=286  Identities=36%  Similarity=0.590  Sum_probs=233.6

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----   84 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|+.++||||+++++++...+    
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  101 (367)
T 1cm8_A           22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD  101 (367)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence            4578999999999999999999999999999999998765444334456779999999999999999999997653    


Q ss_pred             --eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           85 --NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        85 --~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                        .+|+||||++++|..++...  .+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++...
T Consensus       102 ~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          102 FTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence              56999999988999888764  48999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .   .....++|++|+|||++.+...++.++|||||||++|||++|++||.+.+..+++..++...+.+....+......
T Consensus       180 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~  256 (367)
T 1cm8_A          180 S---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD  256 (367)
T ss_dssp             S---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             c---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhH
Confidence            3   2445688999999999987677999999999999999999999999999999999999998887654322211100


Q ss_pred             cc--c-cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          243 PD--Y-VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       243 ~~--~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ..  + ..........+..+++.+++++.+||.+||..||.+|||++|+|+||||.....
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             HHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             HHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence            00  0 000112233455677888999999999999999999999999999999987544

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.8e-54  Score=420.06  Aligned_cols=269  Identities=23%  Similarity=0.325  Sum_probs=230.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++.++||+|+||+||+|+++.+++.||+|++.+... .......+.+|+.++..++||||++++++|.+.+.+|+|
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  152 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV  152 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence            5789999999999999999999999999999999976432 223334578899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-c
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~  167 (397)
                      ||||. |+|..++.+....+++..++.|+.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+....... .
T Consensus       153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~  232 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ  232 (437)
T ss_dssp             ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred             EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcc
Confidence            99997 689999987666799999999999999999999999999999999999999999999999999987654333 3


Q ss_pred             ccccccCceeeChhccc----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          168 FTHQVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      ....+||+.|+|||++.    +...|+.++|||||||++|||++|++||.+.+..+.+.+|+.......           
T Consensus       233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-----------  301 (437)
T 4aw2_A          233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ-----------  301 (437)
T ss_dssp             CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC-----------
T ss_pred             cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc-----------
Confidence            34568999999999986    235689999999999999999999999999988888888764321100           


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~~~~  302 (397)
                                  +......+|+++++||.+||..+|++  |++++|+++||||++..|...
T Consensus       302 ------------~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~l  350 (437)
T 4aw2_A          302 ------------FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNI  350 (437)
T ss_dssp             ------------CCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTTG
T ss_pred             ------------CCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHHH
Confidence                        01112346899999999999999888  999999999999999877653

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=5.3e-54  Score=399.62  Aligned_cols=259  Identities=28%  Similarity=0.482  Sum_probs=225.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ...++|++.+.||+|+||+||+|++..+|+.||||++.....  .....+.+|+.+++.++||||++++++|..++.+|+
T Consensus        17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   94 (297)
T 3fxz_A           17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV   94 (297)
T ss_dssp             CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence            357899999999999999999999999999999999875433  234457789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||||. |+|.+++...  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        95 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  172 (297)
T 3fxz_A           95 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (297)
T ss_dssp             EEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             EEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence            999997 6888888765  3899999999999999999999999999999999999999999999999999987766666


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+........               
T Consensus       173 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---------------  236 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL---------------  236 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHC-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC---------------
T ss_pred             cCCccCCcCccChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---------------
Confidence            667789999999999977 5689999999999999999999999998887777666654311100               


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                .....++..+.+||.+||+.||++|||++|+++||||+..
T Consensus       237 ----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          237 ----------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             ----------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             ----------CCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence                      1112458999999999999999999999999999999764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=2.1e-54  Score=418.80  Aligned_cols=266  Identities=25%  Similarity=0.338  Sum_probs=227.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|.+.+.||+|+||+||+|+++.+++.||+|++.+... .......+.+|+.+++.++||||++++++|.+.+.+|+|
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV  147 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  147 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            5789999999999999999999999999999999976432 223344678999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-c
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~  167 (397)
                      ||||+ |+|.+++...  .+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+....... .
T Consensus       148 ~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~  225 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR  225 (410)
T ss_dssp             ECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred             EeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence            99997 6888888754  489999999999999999999999999999999999999999999999999987654432 3


Q ss_pred             ccccccCceeeChhcccCccC---CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          168 FTHQVFARWYRAPELLFGAKQ---YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~---~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ....+||+.|+|||++.+...   |+.++|||||||++|||++|++||.+.+..+.+.+|........   +        
T Consensus       226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~--------  294 (410)
T 3v8s_A          226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---F--------  294 (410)
T ss_dssp             CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC---C--------
T ss_pred             ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccccc---C--------
Confidence            346789999999999976332   78999999999999999999999999988888888765421110   0        


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~~~~  302 (397)
                                   .....+|.++++||.+||+.+|.+  |++++||++||||++..|...
T Consensus       295 -------------p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~~~  341 (410)
T 3v8s_A          295 -------------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWE  341 (410)
T ss_dssp             -------------CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCCST
T ss_pred             -------------CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHHHH
Confidence                         011245899999999999999988  999999999999999877543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=3.1e-54  Score=409.00  Aligned_cols=261  Identities=26%  Similarity=0.404  Sum_probs=226.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   87 (397)
                      ..++|.+.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|..+++.+ +||||++++++|.+.+.+|
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            46899999999999999999999999999999999976532 223344567899999987 9999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +|||||. |+|..++.+.. .+++..++.++.||+.||+|||++||+||||||+||||+.+|++||+|||+++.......
T Consensus        95 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  173 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  173 (345)
T ss_dssp             EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence            9999997 58888887644 499999999999999999999999999999999999999999999999999987654445


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+..+.+..+.....                 
T Consensus       174 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----------------  235 (345)
T 1xjd_A          174 KTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP-----------------  235 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----------------
T ss_pred             cccCCCCCcccCChhhhcC-CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCC-----------------
Confidence            5667789999999999977 5689999999999999999999999999888777777654210                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHH-HHhcCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ-QALEHRYFSSAPLP  300 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~-e~l~hp~~~~~~~~  300 (397)
                                 .+...++.++++||.+||..||++||++. ++++||||.+..|.
T Consensus       236 -----------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w~  279 (345)
T 1xjd_A          236 -----------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE  279 (345)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCHH
T ss_pred             -----------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCHH
Confidence                       11123589999999999999999999998 99999999987653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-54  Score=406.91  Aligned_cols=260  Identities=24%  Similarity=0.414  Sum_probs=227.1

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .+.++|++.+.||+|+||+||+|.+..+++.||+|.+....   .....+.+|+.+|+.++||||++++++|.+.+.+|+
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l   78 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVM   78 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence            46789999999999999999999999999999999986432   223456789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc--CCcEEEeeeccceeeCCCC
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~--~~~~kl~DFG~a~~~~~~~  165 (397)
                      |||||+ |+|.+.+......+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++..... 
T Consensus        79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~-  157 (321)
T 1tki_A           79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-  157 (321)
T ss_dssp             EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred             EEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence            999998 5899988776667999999999999999999999999999999999999987  789999999999887543 


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      .......+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.......              
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--------------  222 (321)
T 1tki_A          158 DNFRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--------------  222 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTT-CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--------------
T ss_pred             CccccccCChhhcCcHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC--------------
Confidence            34456678999999999976 558999999999999999999999999988888877776642111              


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                ....++.+|.++++||.+||..||.+|||+.|+|+||||...
T Consensus       223 ----------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          223 ----------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             ----------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             ----------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence                      112334668999999999999999999999999999999753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=7.2e-55  Score=417.15  Aligned_cols=286  Identities=36%  Similarity=0.590  Sum_probs=221.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----   83 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|+.++||||++++++|...     
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~  105 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE  105 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence            357899999999999999999999999999999999876543333445677999999999999999999998654     


Q ss_pred             -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                       ..+|+|+||++++|..++..  ..+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++...
T Consensus       106 ~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          106 FNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             CCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence             56899999999898888765  349999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .   .....++|++|+|||++.+...++.++|||||||++|+|++|++||.+.+..+++..++..++.+....+......
T Consensus       184 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          184 D---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             c---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence            3   2445688999999999987677999999999999999999999999999999999999998887654333222110


Q ss_pred             cc--cc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          243 PD--YV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       243 ~~--~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ..  +. .........+...++.+++++++||.+||+.||.+|||++|+|+||||.....
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence            00  00 00111223455667788999999999999999999999999999999987543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=6.8e-54  Score=409.74  Aligned_cols=264  Identities=31%  Similarity=0.453  Sum_probs=226.3

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ....+.++|.+.+.||+|+||+||+|.+..+|+.||+|++............+.+|+.+++.++||||++++++|.+.+.
T Consensus        23 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  102 (362)
T 2bdw_A           23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF  102 (362)
T ss_dssp             -CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             CCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            35567899999999999999999999999999999999998665444444567799999999999999999999999999


Q ss_pred             EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cEEEeeeccceee
Q 015948           86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIF  161 (397)
Q Consensus        86 ~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~kl~DFG~a~~~  161 (397)
                      .|+|||||.| +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||++...
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  181 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred             EEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence            9999999985 888877654 4599999999999999999999999999999999999998654   5999999999876


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ... ......+||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+..+....+.........        
T Consensus       182 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~--------  251 (362)
T 2bdw_A          182 NDS-EAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS--------  251 (362)
T ss_dssp             TTC-CSCCCSCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT--------
T ss_pred             cCC-cccccCCCCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCc--------
Confidence            543 23445679999999999976 56899999999999999999999999998887777776654221111        


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                      ..+..+++++++||.+||+.||.+|||+.|+|+||||..
T Consensus       252 ----------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          252 ----------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             ----------------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             ----------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence                            112345899999999999999999999999999999964

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.2e-54  Score=412.48  Aligned_cols=281  Identities=31%  Similarity=0.576  Sum_probs=227.4

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--------   81 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--------   81 (397)
                      ..++|++.+.||+|+||+||+|++..+|+.||||++......      ..+|+.+|+.++||||++++++|.        
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            467899999999999999999999999999999998654321      227999999999999999999983        


Q ss_pred             ------------------------------cCCeEEEEEEccccCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHhH
Q 015948           82 ------------------------------HKGNLHLVFEFMETDLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCH  128 (397)
Q Consensus        82 ------------------------------~~~~~~lv~e~~~g~L~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH  128 (397)
                                                    ...++|+||||++|+|...+.   ..+..+++..++.++.||+.||.|||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  158 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH  158 (383)
T ss_dssp             -------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                                          344589999999998777665   34567999999999999999999999


Q ss_pred             hCCccccCCCCCcEEEc-cCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh
Q 015948          129 KKWVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN  207 (397)
Q Consensus       129 ~~~ivHrDlkp~NILl~-~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~  207 (397)
                      ++||+||||||+|||++ .++.+||+|||+|+..... ......++|+.|+|||++.+...++.++|||||||++|+|++
T Consensus       159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  237 (383)
T 3eb0_A          159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL  237 (383)
T ss_dssp             TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence            99999999999999998 6899999999999876443 334456789999999999876779999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccc-cCCCCCHHHHHHHHHhcCcCCCCCCCHH
Q 015948          208 RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRS-LFPSASDDALDLLSKMFTYDPKARITAQ  286 (397)
Q Consensus       208 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~R~t~~  286 (397)
                      |++||.+.+..+.+..++..++.+....+......-....+.......+.. +....++++.+||.+||+.||.+|||+.
T Consensus       238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  317 (383)
T 3eb0_A          238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY  317 (383)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            999999999999999999988876543221111000000111111122222 2345799999999999999999999999


Q ss_pred             HHhcCCCCCCC
Q 015948          287 QALEHRYFSSA  297 (397)
Q Consensus       287 e~l~hp~~~~~  297 (397)
                      |+|+||||...
T Consensus       318 e~l~hp~f~~~  328 (383)
T 3eb0_A          318 EAMAHPFFDHL  328 (383)
T ss_dssp             HHHTSGGGHHH
T ss_pred             HHhcCHHHHHH
Confidence            99999999753

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.1e-54  Score=404.47  Aligned_cols=255  Identities=23%  Similarity=0.302  Sum_probs=191.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----e
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----N   85 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----~   85 (397)
                      +.++|++.+.||+|+||+||+|++  +|+.||||++.....   .......|+..+.+++|||||++++++.+++    .
T Consensus         1 Iar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~---~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~   75 (303)
T 3hmm_A            1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch---hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceE
Confidence            467899999999999999999987  589999999864321   1112234666677899999999999997653    6


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC--------CccccCCCCCcEEEccCCcEEEeeec
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK--------WVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~--------~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                      +|||||||+ |+|.+++....  ++++.+..++.|++.||+|||++        +|+||||||+||||+.++++||+|||
T Consensus        76 ~~lV~Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG  153 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEecCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence            899999998 68988887654  89999999999999999999987        99999999999999999999999999


Q ss_pred             cceeeCCCCCc----ccccccCceeeChhcccCcc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH--------
Q 015948          157 LARIFGSPDRR----FTHQVFARWYRAPELLFGAK-----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDID--------  219 (397)
Q Consensus       157 ~a~~~~~~~~~----~~~~~~t~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--------  219 (397)
                      +|+........    ....+||+.|||||++.+..     .|+.++|||||||+||||+||.+||....+..        
T Consensus       154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~  233 (303)
T 3hmm_A          154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred             CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence            99887554322    23467999999999997532     36779999999999999999988775432210        


Q ss_pred             ---HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccC--CCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          220 ---QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLF--PSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       220 ---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                         ....+.......                   ...+.+...+  ...+..+.+|+.+||+.||++|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~-------------------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          234 SDPSVEEMRKVVCEQ-------------------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             SSCCHHHHHHHHTTS-------------------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHhcc-------------------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence               001111110000                   0001111111  112357889999999999999999999976

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.1e-53  Score=416.36  Aligned_cols=281  Identities=35%  Similarity=0.614  Sum_probs=227.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec------C
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------K   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------~   83 (397)
                      ...+|.+.+.||+|+||+||+|++..+|+.||||++.....      ...+|+++|+.++||||++++++|..      .
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~  125 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE  125 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence            35579999999999999999999999999999999865322      12379999999999999999998843      2


Q ss_pred             CeEEEEEEccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccce
Q 015948           84 GNLHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLAR  159 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~  159 (397)
                      .++++||||+++++...+..   ....+++..++.++.||+.||.|||++||+||||||+||||+.+ +.+||+|||+++
T Consensus       126 ~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          126 VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            35789999999988776653   45669999999999999999999999999999999999999965 678999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      ...... .....++|++|+|||++.+...|+.++|||||||++|||++|++||.+.+..+++..+++.++.+....|...
T Consensus       206 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~  284 (420)
T 1j1b_A          206 QLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM  284 (420)
T ss_dssp             ECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred             hcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence            764432 3345678999999999987667999999999999999999999999999999999999998886654332211


Q ss_pred             CCCcccccc--ccccCCCccc-cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          240 AYLPDYVEY--QYVAAPPLRS-LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       240 ~~~~~~~~~--~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      .  +.+..+  ......++.. +.+.+++++++||.+||..||.+|||+.|+++||||.....
T Consensus       285 ~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          285 N--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             C--SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             C--hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence            0  001111  1111122222 23567899999999999999999999999999999986544

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.1e-53  Score=412.84  Aligned_cols=284  Identities=35%  Similarity=0.645  Sum_probs=229.2

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC--
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--   84 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--   84 (397)
                      +.....+|.+.+.||+|+||+||+|++..++. +|+|++......      ..+|+.+|+.++||||++++++|...+  
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~  107 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDK  107 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSS
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCC
Confidence            44567889999999999999999999987766 888887643221      127999999999999999999984433  


Q ss_pred             ----eEEEEEEccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc-cCCcEEEeeec
Q 015948           85 ----NLHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFG  156 (397)
Q Consensus        85 ----~~~lv~e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~-~~~~~kl~DFG  156 (397)
                          ++|+|||||+++++..+..   ....+++..++.++.||+.||+|||++||+||||||+||||+ .++.+||+|||
T Consensus       108 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG  187 (394)
T 4e7w_A          108 KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG  187 (394)
T ss_dssp             SSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             CCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence                4899999999987766543   355699999999999999999999999999999999999999 79999999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      +|+...... .....++|++|+|||++.+...|+.++|||||||++|||++|++||.+.+..+.+..+++.++.+....+
T Consensus       188 ~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~  266 (394)
T 4e7w_A          188 SAKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI  266 (394)
T ss_dssp             TCEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             CcccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            998764433 3445678999999999987677999999999999999999999999999999999999998887654332


Q ss_pred             CCCCCCccccc--cccccCCCccc-cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          237 PDLAYLPDYVE--YQYVAAPPLRS-LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       237 ~~~~~~~~~~~--~~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      ....  +.+..  +......++.. +.+.+++++++||.+||+.||.+|||+.|+++||||......
T Consensus       267 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  331 (394)
T 4e7w_A          267 KTMN--PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG  331 (394)
T ss_dssp             HHHC--GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred             HhhC--hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence            2110  00111  11111222222 234589999999999999999999999999999999876543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=8.1e-54  Score=407.38  Aligned_cols=262  Identities=23%  Similarity=0.329  Sum_probs=226.3

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~   86 (397)
                      ...++|.+.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|..+|..+ .||||++++++|++.+.+
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            346889999999999999999999999999999999986532 223344577899999988 799999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+|||||+ |+|...+.+.+ .+++..++.|+.||+.||.|||++||+||||||+||||+.+|++||+|||+++......
T Consensus        97 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  175 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence            99999998 58888887644 49999999999999999999999999999999999999999999999999998755445


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+..+.+..+.....                
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~----------------  238 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV----------------  238 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC----------------
T ss_pred             cccccccCCccccChhhhcC-CCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC----------------
Confidence            55667789999999999976 5689999999999999999999999999888877777765311                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP  300 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~  300 (397)
                                  .+...+|.++++||.+||..||.+||+     ++++++||||.+..|.
T Consensus       239 ------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~  286 (353)
T 2i0e_A          239 ------------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE  286 (353)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHH
T ss_pred             ------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHH
Confidence                        111345899999999999999999994     6999999999987654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-53  Score=399.97  Aligned_cols=257  Identities=23%  Similarity=0.369  Sum_probs=224.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|++..+|+.||+|++.+... .......+.+|+.+++.++||||++++++|.+.+.+|+|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            5789999999999999999999999999999999976432 223344567899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||+. |+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....   ..
T Consensus        85 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~---~~  160 (318)
T 1fot_A           85 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VT  160 (318)
T ss_dssp             ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS---CB
T ss_pred             EeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC---cc
Confidence            99998 5888888764 4599999999999999999999999999999999999999999999999999987643   23


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+..+.+..+.....                   
T Consensus       161 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-------------------  220 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-------------------  220 (318)
T ss_dssp             CCCCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-------------------
T ss_pred             ccccCCccccCHhHhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-------------------
Confidence            45678999999999976 5689999999999999999999999999888877777765311                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP  300 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~  300 (397)
                               .+.+.+++++++||.+||..||++|+     +++++++||||.+..+.
T Consensus       221 ---------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~  268 (318)
T 1fot_A          221 ---------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWE  268 (318)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHH
T ss_pred             ---------CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHH
Confidence                     11234589999999999999999999     89999999999987653

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.4e-53  Score=404.95  Aligned_cols=261  Identities=23%  Similarity=0.347  Sum_probs=219.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   87 (397)
                      -.++|++.+.||+|+||+||+|+++.+++.||||++.+..... .....+.+|+.+++.+ +||||++++++|.+.+.+|
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF   86 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence            3678999999999999999999999999999999998654322 2234467899999988 8999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||+. |+|...+.+.. .+++..++.++.||+.||.|||++||+||||||+||||+.+|++||+|||+++.......
T Consensus        87 lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           87 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred             EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence            9999998 58888877643 599999999999999999999999999999999999999999999999999987554455


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--------cHH-HHHHHHHHhCCCCCCCCC
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--------DID-QLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--------~~~-~~~~i~~~~~~~~~~~~~  237 (397)
                      .....+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||....        ... ....+... .        
T Consensus       166 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-~--------  235 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-Q--------  235 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC-C--------
T ss_pred             cccccCCCccccCccccCC-CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC-C--------
Confidence            5667789999999999977 568999999999999999999999997532        111 22222221 0        


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH------HHHhcCCCCCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA------QQALEHRYFSSAPLP  300 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~------~e~l~hp~~~~~~~~  300 (397)
                                         ..+...++.++++||.+||+.||.+||++      +|+++||||.+..|.
T Consensus       236 -------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~  285 (345)
T 3a8x_A          236 -------------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD  285 (345)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHH
T ss_pred             -------------------CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHH
Confidence                               01223468999999999999999999995      899999999987653

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.5e-52  Score=394.49  Aligned_cols=288  Identities=39%  Similarity=0.724  Sum_probs=244.9

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEEC-CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEeeee---
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDT-KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFP---   81 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~---   81 (397)
                      ...++|++.+.||+|+||+||+|++. .+|+.||+|++............+.+|+.+++.+   +||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            35689999999999999999999995 6788999999987655444455677888888877   8999999999986   


Q ss_pred             --cCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           82 --HKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        82 --~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                        ....+|+||||++|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~  167 (326)
T 1blx_A           88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  167 (326)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence              567899999999999999988753 34899999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      +..... .......++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+...++......|+.
T Consensus       168 ~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  245 (326)
T 1blx_A          168 RIYSFQ-MALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  245 (326)
T ss_dssp             CCCCGG-GGGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred             ccccCC-CCccccccccceeCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc
Confidence            876432 23445678899999999976 5689999999999999999999999999999999999999988887777776


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ....+... +......+...+.+.++..+++||.+||..||.+|||+.|+++||||.+...
T Consensus       246 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          246 DVALPRQA-FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             TCSSCGGG-SCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             ccccchhh-hcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence            54443321 1222334455667788999999999999999999999999999999987654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.3e-54  Score=407.06  Aligned_cols=291  Identities=34%  Similarity=0.621  Sum_probs=234.8

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      +-....++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+++.++||||+++++++.+.+.
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   98 (331)
T 4aaa_A           19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR   98 (331)
T ss_dssp             CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCE
Confidence            44456899999999999999999999999999999999997655444444556789999999999999999999999999


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      +|+||||++|+++..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++......
T Consensus        99 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             EEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence            99999999988777776666679999999999999999999999999999999999999999999999999998776655


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC---C
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY---L  242 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~  242 (397)
                      .......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+...+..+.....   .
T Consensus       179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (331)
T 4aaa_A          179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF  258 (331)
T ss_dssp             -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred             cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence            5556678899999999998766789999999999999999999999999999998888887766543321100000   0


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ............+....++.+++++.+||.+||+.||++|||++|+|+||||+.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            000000111223344556678999999999999999999999999999999975

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-53  Score=413.65  Aligned_cols=268  Identities=24%  Similarity=0.319  Sum_probs=227.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.++..++||||++++++|.+.+.+|+|
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  139 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV  139 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            5789999999999999999999999999999999976432 222344577899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-c
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~  167 (397)
                      ||||. |+|..++.+.+..+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+++....... .
T Consensus       140 mE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~  219 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR  219 (412)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred             EcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence            99996 689999887666799999999999999999999999999999999999999999999999999988754433 2


Q ss_pred             ccccccCceeeChhcccC------ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          168 FTHQVFARWYRAPELLFG------AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ....+||+.|+|||++.+      ...|+.++|||||||++|||++|++||.+.+..+.+.+|........         
T Consensus       220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~---------  290 (412)
T 2vd5_A          220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS---------  290 (412)
T ss_dssp             CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC---------
T ss_pred             cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC---------
Confidence            345689999999999963      24689999999999999999999999999888888777764311000         


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCC---CCHHHHhcCCCCCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR---ITAQQALEHRYFSSAPLPTE  302 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R---~t~~e~l~hp~~~~~~~~~~  302 (397)
                                    +......+|+++++||.+||. +|.+|   ++++|+++||||.+..|...
T Consensus       291 --------------~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l  339 (412)
T 2vd5_A          291 --------------LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGL  339 (412)
T ss_dssp             --------------CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTS
T ss_pred             --------------CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence                          001123568999999999999 99998   59999999999999887654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=6.1e-54  Score=408.54  Aligned_cols=263  Identities=32%  Similarity=0.497  Sum_probs=221.4

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ..+.++|++.+.||+|+||+||+|+++.+|+.||||++......   ......+.+|+.+++.++||||++++++|.+++
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   99 (351)
T 3c0i_A           20 VLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG   99 (351)
T ss_dssp             CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             CccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            34678999999999999999999999999999999999754321   123446789999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc---EEEeeecc
Q 015948           85 NLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGL  157 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~---~kl~DFG~  157 (397)
                      .+|+|||||+ |+|...+.+.   +..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||+
T Consensus       100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999998 5887776543   345899999999999999999999999999999999999987655   99999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      +.............+||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.. ......+.......      
T Consensus       180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~------  251 (351)
T 3c0i_A          180 AIQLGESGLVAGGRVGTPHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKM------  251 (351)
T ss_dssp             CEECCTTSCBCCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCC------
T ss_pred             eeEecCCCeeecCCcCCcCccCHHHHcC-CCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCC------
Confidence            9987665555566789999999999976 568999999999999999999999998753 34444444321100      


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                        ....++.++.++++||.+||..||++|||+.|+|+||||..
T Consensus       252 ------------------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          252 ------------------NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             ------------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             ------------------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence                              01223456899999999999999999999999999999975

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.5e-53  Score=407.78  Aligned_cols=264  Identities=21%  Similarity=0.401  Sum_probs=221.2

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ....++|.+.+.||+|+||+||+|++..+++.||+|++.+... .......+.+|+.+|+.++|||||+++++|.+.+.+
T Consensus        11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~   90 (384)
T 4fr4_A           11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM   90 (384)
T ss_dssp             CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            3347899999999999999999999999999999999976542 223345677899999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+|||||. |+|...+.. ...+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+++.... .
T Consensus        91 ~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~-~  168 (384)
T 4fr4_A           91 FMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-E  168 (384)
T ss_dssp             EEEECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT-T
T ss_pred             EEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC-C
Confidence            99999997 577777765 45699999999999999999999999999999999999999999999999999987643 3


Q ss_pred             CcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 RRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--IDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ......+||+.|+|||++.+  ...|+.++|||||||++|+|++|.+||.+.+.  ...+...+.....           
T Consensus       169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~-----------  237 (384)
T 4fr4_A          169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV-----------  237 (384)
T ss_dssp             CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC-----------
T ss_pred             CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhccc-----------
Confidence            44566789999999999964  24589999999999999999999999975432  2222222221110           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-HHHHhcCCCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-AQQALEHRYFSSAPLP  300 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-~~e~l~hp~~~~~~~~  300 (397)
                                      .+...++.++.+||.+||+.||.+||+ ++++++||||.+..|.
T Consensus       238 ----------------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w~  281 (384)
T 4fr4_A          238 ----------------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWD  281 (384)
T ss_dssp             ----------------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCHH
T ss_pred             ----------------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCHH
Confidence                            112345899999999999999999998 8999999999987764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.4e-53  Score=398.03  Aligned_cols=263  Identities=26%  Similarity=0.433  Sum_probs=225.9

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC----ccchHHHHHHHHHhcCCCCeeEEEeeeecC
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----VNFTALREIKLLKELKSPHIIELIDAFPHK   83 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~   83 (397)
                      ..+.++|.+.+.||+|+||+||+|++..+|+.||+|++........    ....+.+|+.+|+.++||||++++++|.+.
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   86 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   86 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            4578899999999999999999999999999999999987543321    234577999999999999999999999999


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC----cEEEeeeccc
Q 015948           84 GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA  158 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~----~~kl~DFG~a  158 (397)
                      +.+|+|||||. |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||++
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           87 TDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             SEEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CEEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            99999999997 5888877654 4699999999999999999999999999999999999999887    8999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      +..... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.......       
T Consensus       166 ~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------  236 (326)
T 2y0a_A          166 HKIDFG-NEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-------  236 (326)
T ss_dssp             EECCTT-SCCCCCCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC-------
T ss_pred             eECCCC-CccccccCCcCcCCceeecC-CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc-------
Confidence            887533 23455678999999999976 568999999999999999999999999988877777665431110       


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                       ....++.++..+++||.+||..||.+|||++|+|+||||...
T Consensus       237 -----------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          237 -----------------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             -----------------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             -----------------CccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence                             112334568999999999999999999999999999999753

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.2e-53  Score=414.29  Aligned_cols=290  Identities=39%  Similarity=0.702  Sum_probs=224.6

Q ss_pred             hhhhcceee-eeeeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee--ec
Q 015948            8 KKVADRYLK-REVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF--PH   82 (397)
Q Consensus         8 ~~~~~~y~i-~~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~--~~   82 (397)
                      ..+.+.|.+ .++||+|+||+||+|+++  .+++.||||++...    .....+.+|+.+|+.++||||++++++|  ..
T Consensus        16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (405)
T 3rgf_A           16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT----GISMSACREIALLRELKHPNVISLQKVFLSHA   91 (405)
T ss_dssp             CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS----SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred             hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC----CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence            346788988 558999999999999966  57889999998643    2234678999999999999999999999  45


Q ss_pred             CCeEEEEEEccccCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE----ccCCcE
Q 015948           83 KGNLHLVFEFMETDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQL  150 (397)
Q Consensus        83 ~~~~~lv~e~~~g~L~~~~~~~--------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl----~~~~~~  150 (397)
                      ...+|+||||++|+|...+...        ...+++..++.++.||+.||.|||++||+||||||+||||    +.++.+
T Consensus        92 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           92 DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred             CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcE
Confidence            7899999999999998887632        2249999999999999999999999999999999999999    677899


Q ss_pred             EEeeeccceeeCCCC---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---------H
Q 015948          151 KLADFGLARIFGSPD---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---------I  218 (397)
Q Consensus       151 kl~DFG~a~~~~~~~---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---------~  218 (397)
                      ||+|||+|+......   ......+||++|+|||++.+...++.++|||||||++|+|++|.+||.+...         .
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~  251 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH  251 (405)
T ss_dssp             EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred             EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence            999999998765432   2344567899999999998766799999999999999999999999987654         5


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCCCccccccccc------cCCC----ccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHH
Q 015948          219 DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV------AAPP----LRSLFPSASDDALDLLSKMFTYDPKARITAQQA  288 (397)
Q Consensus       219 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~  288 (397)
                      +++..++..++.+....|.....++........      ....    ........++.+.+||.+||+.||.+|||++|+
T Consensus       252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~  331 (405)
T 3rgf_A          252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA  331 (405)
T ss_dssp             HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            889999999999998888876655443221100      0000    011122347889999999999999999999999


Q ss_pred             hcCCCCCCCCCCC
Q 015948          289 LEHRYFSSAPLPT  301 (397)
Q Consensus       289 l~hp~~~~~~~~~  301 (397)
                      |+||||...+++.
T Consensus       332 L~hp~f~~~~~~~  344 (405)
T 3rgf_A          332 MQDPYFLEDPLPT  344 (405)
T ss_dssp             HTSGGGTSSSCCC
T ss_pred             hcChhhccCCCCc
Confidence            9999999876654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=7.5e-54  Score=404.90  Aligned_cols=261  Identities=30%  Similarity=0.468  Sum_probs=220.7

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ++....++|.+.+.||+|+||+||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++.+.+
T Consensus         3 i~~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   82 (336)
T 3h4j_B            3 ISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT   82 (336)
T ss_dssp             -CCSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cCccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC
Confidence            456678899999999999999999999999999999999976432 2233456789999999999999999999999999


Q ss_pred             eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .+|+||||++|+|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        83 ~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~-  160 (336)
T 3h4j_B           83 DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD-  160 (336)
T ss_dssp             EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT-
T ss_pred             EEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC-
Confidence            999999999999999987754 499999999999999999999999999999999999999999999999999987643 


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      .......+||+.|+|||++.+...++.++|||||||++|+|++|..||.+.........+                    
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i--------------------  220 (336)
T 3h4j_B          161 GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--------------------  220 (336)
T ss_dssp             SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--------------------
T ss_pred             CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--------------------
Confidence            334456789999999999987555588999999999999999999999765322110000                    


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                              ..........+|+++.+||.+||..||.+|||++|+++||||+.
T Consensus       221 --------~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          221 --------NSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             --------CSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             --------HcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence                    00011223456899999999999999999999999999999975

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.3e-53  Score=408.25  Aligned_cols=285  Identities=37%  Similarity=0.641  Sum_probs=236.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----C
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----G   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~   84 (397)
                      +.++|++.+.||+|+||+||+|++..+++.||||++..... ......+.+|+.+|+.++||||+++++++...     .
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC-cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            35799999999999999999999999999999999874322 22234677899999999999999999998654     4


Q ss_pred             eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .+|+||||++|+|...+....  +++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.....
T Consensus       104 ~~~iv~e~~~~~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  181 (364)
T 3qyz_A          104 DVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  181 (364)
T ss_dssp             CEEEEEECCSEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             eEEEEEcccCcCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence            799999999999999987653  899999999999999999999999999999999999999999999999999876433


Q ss_pred             CC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 DR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ..   .....+||++|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....+.....
T Consensus       182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  261 (364)
T 3qyz_A          182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  261 (364)
T ss_dssp             GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence            21   234568899999999987767799999999999999999999999999999999999988887665433221111


Q ss_pred             Cccc---cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          242 LPDY---VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       242 ~~~~---~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      ....   .........++...++.+++++.+||.+||+.||++|||++|+|+||||+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            0000   0011112233455667889999999999999999999999999999999875

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=6.7e-53  Score=400.85  Aligned_cols=257  Identities=24%  Similarity=0.377  Sum_probs=225.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|++.+.||+|+||+||+|++..+|+.||||++.+... .......+.+|+.+|+.++||||++++++|.+.+.+|+
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            46899999999999999999999999999999999976542 22334567789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||++ |+|.+.+.+.. .+++..++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||+++.....   
T Consensus       119 v~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---  194 (350)
T 1rdq_E          119 VMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---  194 (350)
T ss_dssp             EEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred             EEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC---
Confidence            999997 68888887654 4999999999999999999999999999999999999999999999999999876432   


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.....                  
T Consensus       195 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~------------------  255 (350)
T 1rdq_E          195 TWTLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV------------------  255 (350)
T ss_dssp             BCCCEECGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC------------------
T ss_pred             cccccCCccccCHHHhcC-CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCC------------------
Confidence            345679999999999976 5689999999999999999999999999888877777765311                  


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL  299 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~  299 (397)
                                .+...++.++.+||.+||+.||.+||+     ++++++||||.+..|
T Consensus       256 ----------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          256 ----------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             ----------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             ----------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCH
Confidence                      111345899999999999999999998     999999999998765

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=3.8e-53  Score=398.48  Aligned_cols=262  Identities=26%  Similarity=0.376  Sum_probs=216.1

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .+.++|++.+.||+|+||+||+|++..+++.||||++...... .....+.+|+.+++.++||||+++++++.+++..|+
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l   82 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            4678999999999999999999999999999999998754332 223467899999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--  165 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--  165 (397)
                      |||||+| +|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+....  
T Consensus        83 v~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           83 FLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             EEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             EEEcCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            9999985 77776654 4459999999999999999999999999999999999999999999999999998754322  


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......+||+.|+|||++.+...++.++|||||||++|+|++|..||.+.+...............              
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------------  227 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------------  227 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--------------
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--------------
Confidence            234456789999999999875556889999999999999999999998766543322222211000              


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 ...+..+++++.+||.+||..||.+|||++|+++||||...
T Consensus       228 -----------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          228 -----------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             -----------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             -----------CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence                       01123458999999999999999999999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.4e-53  Score=408.56  Aligned_cols=262  Identities=23%  Similarity=0.345  Sum_probs=219.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHH-HHhcCCCCeeEEEeeeecCCeE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKL-LKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~-l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ...++|++.+.||+|+||+||+|+++.+++.||||++.+.... ......+.+|..+ ++.++||||++++++|.+.+.+
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            3468899999999999999999999999999999999875432 2233345667776 5778999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+|||||. |+|...+.+.. .+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+++......
T Consensus       115 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred             EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence            99999998 48888777644 58999999999999999999999999999999999999999999999999998755555


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+..+....+.....                
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~----------------  256 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL----------------  256 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC----------------
T ss_pred             CccccccCCccccCHHHhCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc----------------
Confidence            55667889999999999976 6699999999999999999999999999888877777765310                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPLP  300 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~~  300 (397)
                                  .+.+.++.++++||.+||+.||.+|+++    +++++||||++..|.
T Consensus       257 ------------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~  303 (373)
T 2r5t_A          257 ------------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWD  303 (373)
T ss_dssp             ------------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHH
T ss_pred             ------------CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHH
Confidence                        1123568999999999999999999986    699999999987654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=4.9e-53  Score=398.48  Aligned_cols=262  Identities=26%  Similarity=0.418  Sum_probs=214.8

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCcc--CCccchHHHHHHHHHhcCCCCeeEEEeeeec
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKELKSPHIIELIDAFPH   82 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~   82 (397)
                      ....++|++.+.||+|+||+||+|++.   .+|+.||+|++.+....  ......+.+|+.+|+.++||||++++++|.+
T Consensus        13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   92 (327)
T 3a62_A           13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT   92 (327)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc
Confidence            345789999999999999999999985   68999999999765321  2233456789999999999999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      .+.+|+|||||. |+|...+.... .+++..++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||+++..
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           93 GGKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             SSCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            999999999998 58888877644 5899999999999999999999999999999999999999999999999999865


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ..........+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.....            
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~------------  238 (327)
T 3a62_A          172 IHDGTVTHTFCGTIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL------------  238 (327)
T ss_dssp             -------CTTSSCCTTSCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC------------
T ss_pred             ccCCccccccCCCcCccCHhhCcC-CCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC------------
Confidence            444444556778999999999976 5689999999999999999999999999888877777765311            


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                                      .+.+.++.++++||.+||..||.+||     +++|+++||||....+
T Consensus       239 ----------------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~  285 (327)
T 3a62_A          239 ----------------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINW  285 (327)
T ss_dssp             ----------------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred             ----------------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCH
Confidence                            11234589999999999999999999     8999999999987654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=8.3e-53  Score=394.12  Aligned_cols=259  Identities=26%  Similarity=0.348  Sum_probs=214.2

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .+..+.++|++.+.||+|+||+||+|++..+|+.||||++...............|+..+..+ +||||++++++|.+++
T Consensus        51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            455677999999999999999999999999999999999865544333334455666666655 8999999999999999


Q ss_pred             eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .+|+||||++|+|...+...+..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++......
T Consensus       131 ~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          131 ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA  210 (311)
T ss_dssp             EEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred             EEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence            99999999999999999888778999999999999999999999999999999999999999999999999999876543


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                       .......||+.|+|||++.+  .++.++|||||||++|||++|..+|.+.....   .+...   .             
T Consensus       211 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---~~~~~---~-------------  268 (311)
T 3p1a_A          211 -GAGEVQEGDPRYMAPELLQG--SYGTAADVFSLGLTILEVACNMELPHGGEGWQ---QLRQG---Y-------------  268 (311)
T ss_dssp             -----CCCCCGGGCCGGGGGT--CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---HHTTT---C-------------
T ss_pred             -CCCcccCCCccccCHhHhcC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHhcc---C-------------
Confidence             23445668999999999876  58999999999999999999976665433222   11110   0             


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                ....+...+++++.+||.+||+.||++|||++|+|+||||+.
T Consensus       269 ----------~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          269 ----------LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             ----------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             ----------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence                      001223456899999999999999999999999999999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2.9e-52  Score=396.91  Aligned_cols=292  Identities=38%  Similarity=0.634  Sum_probs=237.2

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--   83 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--   83 (397)
                      +...+.++|.+.+.||+|+||+||+|++..+|+.||||++..... ......+.+|+.+++.++||||+++++++...  
T Consensus         5 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   83 (353)
T 2b9h_A            5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK-PLFALRTLREIKILKHFKHENIITIFNIQRPDSF   83 (353)
T ss_dssp             CCCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCS
T ss_pred             cccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc-chHHHHHHHHHHHHHhCcCCCcCCeeeeeccccc
Confidence            455678999999999999999999999999999999999864321 22234567899999999999999999987654  


Q ss_pred             ---CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           84 ---GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        84 ---~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                         ...|+||||++|+|...+...  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        84 ~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           84 ENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             TTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence               689999999999999988764  489999999999999999999999999999999999999999999999999987


Q ss_pred             eCCCCC----------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 015948          161 FGSPDR----------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT  230 (397)
Q Consensus       161 ~~~~~~----------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  230 (397)
                      ......          .....+||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..++..++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  241 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT  241 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence            643221          1234578999999999876677999999999999999999999999999988888888888776


Q ss_pred             CCCCCCCCCCCCccccc----cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          231 ATPSQWPDLAYLPDYVE----YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      +................    ........+...++.+++++.+||.+||+.||++|||++|+++||||+....+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence            54332211111111000    01112234455667889999999999999999999999999999999876544

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-52  Score=403.49  Aligned_cols=262  Identities=28%  Similarity=0.455  Sum_probs=225.6

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .+.++|.+.+.||+|+||+||+|.+..+|+.||+|++......  ....+.+|+.+|+.++||||++++++|.+.+.+|+
T Consensus        48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  125 (387)
T 1kob_A           48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL--DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL  125 (387)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH--HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred             ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchh--hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence            4678999999999999999999999999999999998754321  23357789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc--CCcEEEeeeccceeeCCCC
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~--~~~~kl~DFG~a~~~~~~~  165 (397)
                      |||||. |+|.+.+......+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++..... 
T Consensus       126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~-  204 (387)
T 1kob_A          126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-  204 (387)
T ss_dssp             EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-
T ss_pred             EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC-
Confidence            999998 5888888776667999999999999999999999999999999999999974  477999999999887543 


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+........             
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~-------------  270 (387)
T 1kob_A          205 EIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD-------------  270 (387)
T ss_dssp             SCEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC-------------
T ss_pred             cceeeeccCCCccCchhccC-CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-------------
Confidence            33445678999999999976 5689999999999999999999999999888777777655311111             


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                 ...+..+++++++||.+||+.||.+|||+.|+|+||||.+..
T Consensus       271 -----------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          271 -----------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             -----------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             -----------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence                       122345689999999999999999999999999999998653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=3.4e-53  Score=406.48  Aligned_cols=285  Identities=37%  Similarity=0.600  Sum_probs=232.4

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE--
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL--   86 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~--   86 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+++.++||||++++++|...+..  
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence            367899999999999999999999999999999999976554444455677999999999999999999999877654  


Q ss_pred             ----EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           87 ----HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        87 ----~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                          |+||||++|+|...+..   .+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++...
T Consensus       119 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          119 FYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             ceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence                99999999998887643   39999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ..   ....++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+......+......
T Consensus       196 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  272 (371)
T 4exu_A          196 AE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK  272 (371)
T ss_dssp             -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred             cC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhh
Confidence            32   345678999999999987677999999999999999999999999999999999999888776543322211100


Q ss_pred             cc--c-cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          243 PD--Y-VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       243 ~~--~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ..  + ..........+...++.+++++++||.+||+.||++|||++|+|+||||+....
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  332 (371)
T 4exu_A          273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD  332 (371)
T ss_dssp             HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCC
T ss_pred             hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCC
Confidence            00  0 000111222344556778999999999999999999999999999999986543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.6e-52  Score=404.30  Aligned_cols=289  Identities=20%  Similarity=0.228  Sum_probs=219.8

Q ss_pred             hcceeeeeeeeec--CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           11 ADRYLKREVLGEG--TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G--~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .++|++.+.||+|  +||+||+|++..+|+.||||++............+.+|+.+++.++|||||+++++|.+++.+|+
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            7899999999999  99999999999999999999998765444445567789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-
Q 015948           89 VFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-  165 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-  165 (397)
                      |||||. |+|.+++... ...+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||.+....... 
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~  183 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ  183 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence            999998 5888888764 3459999999999999999999999999999999999999999999999999987543221 


Q ss_pred             ------CcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC--CC
Q 015948          166 ------RRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS--QW  236 (397)
Q Consensus       166 ------~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~  236 (397)
                            ......+||+.|+|||++.+. ..|+.++|||||||++|+|++|.+||.+.+..+.+..+..........  ..
T Consensus       184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (389)
T 3gni_B          184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI  263 (389)
T ss_dssp             ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------
T ss_pred             cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccc
Confidence                  122335788899999999763 468999999999999999999999999877666555443321100000  00


Q ss_pred             CC------------CCCCcccc----ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          237 PD------------LAYLPDYV----EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       237 ~~------------~~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      +.            .....+..    ........+.......+++++++||.+||+.||++|||++|+|+||||+....
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             ------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             ccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence            00            00000000    00000111122344567999999999999999999999999999999987544

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.3e-52  Score=409.75  Aligned_cols=283  Identities=30%  Similarity=0.540  Sum_probs=228.8

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc------CCCCeeEEEeeee
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL------KSPHIIELIDAFP   81 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~l~~~~~   81 (397)
                      ..+.++|++.+.||+|+||+||+|++..+++.||||++....   .....+.+|+.+++.+      +|+||++++++|.
T Consensus        93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~  169 (429)
T 3kvw_A           93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT  169 (429)
T ss_dssp             CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE
T ss_pred             CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc---chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc
Confidence            456789999999999999999999999999999999986432   2233566788888888      5679999999999


Q ss_pred             cCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc--EEEeeeccc
Q 015948           82 HKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLA  158 (397)
Q Consensus        82 ~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~--~kl~DFG~a  158 (397)
                      ..+++|+||||++|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||||+.++.  +||+|||++
T Consensus       170 ~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          170 FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             cCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence            999999999999999999988764 34999999999999999999999999999999999999999987  999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      +....   .....++|+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+..+.+..++..++.+....+..
T Consensus       250 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~  325 (429)
T 3kvw_A          250 CYEHQ---RVYTYIQSRFYRAPEVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDA  325 (429)
T ss_dssp             EETTC---CCCSSCSCGGGCCHHHHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             eecCC---cccccCCCCCccChHHHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHh
Confidence            87543   2345688999999999987 5689999999999999999999999999999999999998887655331111


Q ss_pred             CCC---------Ccccccccc---------------------ccCCCcc-ccCCCCCHHHHHHHHHhcCcCCCCCCCHHH
Q 015948          239 LAY---------LPDYVEYQY---------------------VAAPPLR-SLFPSASDDALDLLSKMFTYDPKARITAQQ  287 (397)
Q Consensus       239 ~~~---------~~~~~~~~~---------------------~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~t~~e  287 (397)
                      ...         .+.+.....                     .....+. .+....++++++||.+||++||++|||++|
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e  405 (429)
T 3kvw_A          326 SKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQ  405 (429)
T ss_dssp             BTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             hhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHH
Confidence            000         000000000                     0000011 112234789999999999999999999999


Q ss_pred             HhcCCCCCCC
Q 015948          288 ALEHRYFSSA  297 (397)
Q Consensus       288 ~l~hp~~~~~  297 (397)
                      +|+||||+..
T Consensus       406 ~L~Hpw~~~~  415 (429)
T 3kvw_A          406 ALRHPWLRRR  415 (429)
T ss_dssp             HHTSTTTC--
T ss_pred             HhCChhhccC
Confidence            9999999863

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.6e-53  Score=407.29  Aligned_cols=284  Identities=34%  Similarity=0.559  Sum_probs=218.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----   84 (397)
                      .+.++|.+.+.||+|+||+||+|++..+++.||||++............+.+|+.+++.++||||++++++|...+    
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~  101 (371)
T 2xrw_A           22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  101 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred             chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence            4578999999999999999999999999999999999865444334456778999999999999999999997654    


Q ss_pred             --eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           85 --NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        85 --~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                        .+|+|||||+|+|.+.+..   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       102 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          102 FQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             CCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             ccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence              7899999999999988863   38999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .. ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..++..++.+.+..+......
T Consensus       179 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  256 (371)
T 2xrw_A          179 TS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  256 (371)
T ss_dssp             ------------CTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred             cc-cccCCceecCCccCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence            32 23445678999999999987 56899999999999999999999999999999999888887766544322211100


Q ss_pred             cc-cccc-ccccCCCcccc-----CC-------CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 PD-YVEY-QYVAAPPLRSL-----FP-------SASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 ~~-~~~~-~~~~~~~~~~~-----~~-------~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      .. +... .......+...     ++       ..+.++++||.+||..||.+|||++|+|+||||+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            00 0000 00000000011     11       125789999999999999999999999999999754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.7e-53  Score=415.92  Aligned_cols=261  Identities=24%  Similarity=0.375  Sum_probs=215.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+|+.++||||++++++|.+.+.+|+
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            46889999999999999999999999999999999976432 22233456789999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      |||||+| +|...+.... .+++..++.++.||+.||+|||+ +||+||||||+||||+.++.+||+|||+|+.......
T Consensus       226 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  304 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA  304 (446)
T ss_dssp             EECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred             EEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence            9999985 7777776544 59999999999999999999998 9999999999999999999999999999987555555


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+.......+.....                 
T Consensus       305 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----------------  366 (446)
T 4ejn_A          305 TMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-----------------  366 (446)
T ss_dssp             --CCSSSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----------------
T ss_pred             ccccccCCccccCHhhcCC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC-----------------
Confidence            5667889999999999976 5689999999999999999999999998887777766654211                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP  300 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~  300 (397)
                                 .+...+++++.+||.+||+.||.+||     +++|+++||||.+..+.
T Consensus       367 -----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~  414 (446)
T 4ejn_A          367 -----------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQ  414 (446)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred             -----------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHH
Confidence                       11234589999999999999999999     99999999999987653

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3.8e-52  Score=384.06  Aligned_cols=263  Identities=31%  Similarity=0.462  Sum_probs=226.2

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ..+.++|++.+.||+|+||+||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++.+.+..|
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY   81 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEE
Confidence            46789999999999999999999999999999999999866544444456778999999999999999999999999999


Q ss_pred             EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc---EEEeeeccceeeCC
Q 015948           88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARIFGS  163 (397)
Q Consensus        88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~---~kl~DFG~a~~~~~  163 (397)
                      +||||+.| +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||++.....
T Consensus        82 ~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           82 LVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            99999985 7877777654 5999999999999999999999999999999999999987665   99999999987654


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .. ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+.........          
T Consensus       161 ~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------  228 (284)
T 3kk8_A          161 SE-AWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS----------  228 (284)
T ss_dssp             SC-BCCCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----------
T ss_pred             Cc-cccCCCCCcCCcCchhhcC-CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCc----------
Confidence            33 3345678999999999976 56899999999999999999999999988887777776554222111          


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                    ..+..+++++.+||.+||+.||++|||++|+++||||.+.
T Consensus       229 --------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          229 --------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             --------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             --------------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence                          1123458999999999999999999999999999999764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1e-52  Score=390.91  Aligned_cols=258  Identities=27%  Similarity=0.459  Sum_probs=212.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC------------------------CccchHHHHHHHH
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE------------------------GVNFTALREIKLL   65 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~------------------------~~~~~~~~E~~~l   65 (397)
                      ..++|++.+.||+|+||+||+|++..+++.||||++.......                        .....+.+|+.+|
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            4689999999999999999999999999999999997654211                        1234578999999


Q ss_pred             HhcCCCCeeEEEeeeec--CCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcE
Q 015948           66 KELKSPHIIELIDAFPH--KGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNL  142 (397)
Q Consensus        66 ~~l~hp~iv~l~~~~~~--~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NI  142 (397)
                      +.++||||+++++++.+  .+.+|+||||++| +|...+.  ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL  168 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence            99999999999999976  6789999999985 5554332  34599999999999999999999999999999999999


Q ss_pred             EEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015948          143 LIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ--YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ  220 (397)
Q Consensus       143 Ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~--~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  220 (397)
                      |++.++.+||+|||+++.............||+.|+|||++.+...  ++.++|||||||++|+|++|..||.+.+....
T Consensus       169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  248 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL  248 (298)
T ss_dssp             EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHH
Confidence            9999999999999999987665555566789999999999976432  47889999999999999999999988776655


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                      ...+.....     .+                     ...+.+++++.+||.+||+.||++|||+.|+++||||+
T Consensus       249 ~~~~~~~~~-----~~---------------------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          249 HSKIKSQAL-----EF---------------------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHCCC-----CC---------------------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHhcccC-----CC---------------------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            555443210     00                     01135689999999999999999999999999999985

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=9.2e-53  Score=398.74  Aligned_cols=257  Identities=27%  Similarity=0.440  Sum_probs=216.4

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~   86 (397)
                      ..+.++|.+.+.||+|+||+||+|+++.+|+.||||++.....      ...+|+.++.++ +||||++++++|.+++.+
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~   91 (342)
T 2qr7_A           18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYV   91 (342)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred             cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence            3578999999999999999999999999999999999975432      234799999888 799999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC----CcEEEeeeccceee
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLARIF  161 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~----~~~kl~DFG~a~~~  161 (397)
                      |+|||||. |+|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||+..+    +.+||+|||+++..
T Consensus        92 ~lv~E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           92 YVVTELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             EEEECCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            99999998 5888888765 459999999999999999999999999999999999998543    35999999999987


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC---CcHHHHHHHHHHhCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS---SDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      ..........+||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.   +..+.+..+.......       
T Consensus       171 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~-------  242 (342)
T 2qr7_A          171 RAENGLLMTPCYTANFVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL-------  242 (342)
T ss_dssp             BCTTCCBCCSSCCSSCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC-------
T ss_pred             cCCCCceeccCCCccccCHHHhcC-CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc-------
Confidence            665555667789999999999976 45889999999999999999999999864   2334444443321110       


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                       ....++.+|+++++||.+||..||++|||++++++||||.+
T Consensus       243 -----------------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          243 -----------------SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             -----------------CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             -----------------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence                             01223456999999999999999999999999999999965

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.8e-52  Score=399.35  Aligned_cols=288  Identities=32%  Similarity=0.551  Sum_probs=221.1

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC---
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG---   84 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---   84 (397)
                      ....++|.+.+.||+|+||+||+|++..+|+.||||++....   .......+++..++.++||||++++++|...+   
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            345789999999999999999999999999999999986532   23345678888999999999999999985533   


Q ss_pred             ----eEEEEEEccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhH--hCCccccCCCCCcEEEcc-CCcEEEee
Q 015948           85 ----NLHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCH--KKWVLHRDMKPNNLLIGS-HGQLKLAD  154 (397)
Q Consensus        85 ----~~~lv~e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH--~~~ivHrDlkp~NILl~~-~~~~kl~D  154 (397)
                          ++|+||||++|+|...+..   ....+++..++.++.||+.||.|||  ++||+||||||+||||+. ++.+||+|
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~D  175 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD  175 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence                3899999999988776653   4556899999999999999999999  999999999999999997 89999999


Q ss_pred             eccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          155 FGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       155 FG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                      ||+++...... ......||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++.....
T Consensus       176 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  254 (360)
T 3e3p_A          176 FGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE  254 (360)
T ss_dssp             CTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             CCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence            99998765433 34456789999999999776678999999999999999999999999999999999998887765433


Q ss_pred             CCCCCCCCccccccccccCCCccccC----CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLF----PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      .+..................++...+    ...++++++||.+||+.||.+|||+.|+|+||||+....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence            22111110000111111111222222    235789999999999999999999999999999987544

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.8e-52  Score=429.39  Aligned_cols=262  Identities=23%  Similarity=0.332  Sum_probs=228.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   87 (397)
                      -.++|.+.+.||+|+||+||+|+++.+++.||||++.+... .......+.+|..+|..+ .||+|++++++|++.+.+|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            35789999999999999999999999999999999986432 233345677899999987 7899999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      |||||+. |+|..++...+ .+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+.......
T Consensus       419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~  497 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV  497 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred             EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence            9999998 58888887654 599999999999999999999999999999999999999999999999999997655555


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+..+.+..|.....                 
T Consensus       498 ~~~~~~GT~~Y~APE~l~~-~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-----------------  559 (674)
T 3pfq_A          498 TTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-----------------  559 (674)
T ss_dssp             CBCCCCSCSSSCCHHHHTC-CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC-----------------
T ss_pred             ccccccCCCcccCHhhhcC-CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC-----------------
Confidence            6667889999999999976 6789999999999999999999999999888888877764211                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPT  301 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~~~  301 (397)
                                 .+...+++++++||.+||+.||.+|+++     +||++||||.+..|..
T Consensus       560 -----------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~  608 (674)
T 3pfq_A          560 -----------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEK  608 (674)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHH
T ss_pred             -----------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHH
Confidence                       1123468999999999999999999997     9999999999877643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=4.5e-52  Score=396.84  Aligned_cols=282  Identities=23%  Similarity=0.368  Sum_probs=224.9

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-----CCCeeEEEeeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-----SPHIIELIDAFP   81 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-----hp~iv~l~~~~~   81 (397)
                      +..+.++|.+.+.||+|+||+||+|++..+++.||||++....   .....+.+|+.+++.+.     ||||++++++|.
T Consensus        30 g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~  106 (360)
T 3llt_A           30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK---KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM  106 (360)
T ss_dssp             TCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH---HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred             ceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch---hhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence            4557899999999999999999999999999999999986322   22334567999999997     999999999999


Q ss_pred             cCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc--------------
Q 015948           82 HKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--------------  146 (397)
Q Consensus        82 ~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~--------------  146 (397)
                      ..+.+|+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||||+.              
T Consensus       107 ~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~  186 (360)
T 3llt_A          107 YYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT  186 (360)
T ss_dssp             ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred             ECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccc
Confidence            999999999999889999988754 35999999999999999999999999999999999999975              


Q ss_pred             -----------CCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 015948          147 -----------HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS  215 (397)
Q Consensus       147 -----------~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  215 (397)
                                 ++.+||+|||+++.....   ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus       187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             TCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence                       788999999999875432   345678999999999987 56999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCCCCCCCCCCCc--cccc-----cccccC-----------CCccccCCCCCHHHHHHHHHhcCc
Q 015948          216 SDIDQLGKIFAAFGTATPSQWPDLAYLP--DYVE-----YQYVAA-----------PPLRSLFPSASDDALDLLSKMFTY  277 (397)
Q Consensus       216 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~-----------~~~~~~~~~~s~~~~~li~~~L~~  277 (397)
                      +..+.+..+....+..+...+.......  .+..     ..+...           ..........++.+.+||.+||+.
T Consensus       263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  342 (360)
T 3llt_A          263 EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQI  342 (360)
T ss_dssp             SHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCS
T ss_pred             cHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcC
Confidence            9888888887766543321110000000  0000     000000           000001112357889999999999


Q ss_pred             CCCCCCCHHHHhcCCCCC
Q 015948          278 DPKARITAQQALEHRYFS  295 (397)
Q Consensus       278 dP~~R~t~~e~l~hp~~~  295 (397)
                      ||++|||++|+|+||||+
T Consensus       343 dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          343 DPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             SGGGSCCHHHHTTSGGGC
T ss_pred             ChhhCCCHHHHhcCcccC
Confidence            999999999999999985

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=5.4e-52  Score=391.34  Aligned_cols=269  Identities=24%  Similarity=0.412  Sum_probs=225.7

Q ss_pred             Chhhhcceeee-eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948            7 SKKVADRYLKR-EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG   84 (397)
Q Consensus         7 ~~~~~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~   84 (397)
                      .+.+.++|.+. +.||+|+||+||+|++..+|+.||+|++............+.+|+.+++.+. ||||++++++|.+.+
T Consensus        23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~  102 (327)
T 3lm5_A           23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS  102 (327)
T ss_dssp             HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence            45688999998 8999999999999999999999999999876554444567889999999995 599999999999999


Q ss_pred             eEEEEEEcccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---CCcEEEeeeccce
Q 015948           85 NLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLAR  159 (397)
Q Consensus        85 ~~~lv~e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~~~~kl~DFG~a~  159 (397)
                      .+|+|||||.| +|..++... ...+++..++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|||+++
T Consensus       103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~  182 (327)
T 3lm5_A          103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR  182 (327)
T ss_dssp             EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCE
T ss_pred             eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcccc
Confidence            99999999985 777776543 356999999999999999999999999999999999999987   7899999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      ...... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+.........      
T Consensus       183 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~------  254 (327)
T 3lm5_A          183 KIGHAC-ELREIMGTPEYLAPEILNY-DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE------  254 (327)
T ss_dssp             EC----------CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT------
T ss_pred             ccCCcc-ccccccCCcCccCCeeecC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc------
Confidence            765432 3345678999999999976 56899999999999999999999999998888777776654222211      


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                                        ..+..++..+.+||.+||+.||.+|||++++|+||||++..+..
T Consensus       255 ------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~  298 (327)
T 3lm5_A          255 ------------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFEN  298 (327)
T ss_dssp             ------------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTC
T ss_pred             ------------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccccc
Confidence                              22345689999999999999999999999999999998876543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.3e-52  Score=413.43  Aligned_cols=261  Identities=33%  Similarity=0.514  Sum_probs=221.4

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ..+.++|++.+.||+|+||+||+|+++.++..||+|++.+..........+.+|+.+|+.++||||++++++|.+.+.+|
T Consensus        33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  112 (494)
T 3lij_A           33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY  112 (494)
T ss_dssp             CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            34678999999999999999999999999999999999876655555667889999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeeccceeeCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGS  163 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~a~~~~~  163 (397)
                      +|||||. |+|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++..   +.+||+|||+++....
T Consensus       113 lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~  191 (494)
T 3lij_A          113 LVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN  191 (494)
T ss_dssp             EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred             EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence            9999998 58888777653 49999999999999999999999999999999999999764   4599999999988754


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . ......+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+..+.+..+.........          
T Consensus       192 ~-~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~----------  258 (494)
T 3lij_A          192 Q-KKMKERLGTAYYIAPEVLRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS----------  258 (494)
T ss_dssp             T-BCBCCCCSCTTTCCHHHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS----------
T ss_pred             C-ccccccCCCcCeeCHHHHcc--cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc----------
Confidence            3 34456789999999999864  5899999999999999999999999999888888777664222111          


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                    ..+..+|+++++||.+||+.||.+|||+.|+|+||||+.
T Consensus       259 --------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          259 --------------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             --------------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             --------------hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence                          223456899999999999999999999999999999975

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=4.9e-52  Score=394.77  Aligned_cols=258  Identities=26%  Similarity=0.420  Sum_probs=222.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|.+.+.||+|+||+||+|++..+|+.||||++...... ......+.+|+.+|+.++||||++++++|.+++..|+
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            457799999999999999999999999999999999765332 2223457789999999999999999999999999999


Q ss_pred             EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||||+.|+|.+.+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.....    
T Consensus       132 v~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----  207 (348)
T 1u5q_A          132 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----  207 (348)
T ss_dssp             EEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----
T ss_pred             EEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC----
Confidence            9999999999998877777999999999999999999999999999999999999999999999999999875432    


Q ss_pred             cccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          169 THQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ...+||+.|+|||++.+  ...++.++|||||||++|||++|.+||.+.+....+..+.......               
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~---------------  272 (348)
T 1u5q_A          208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA---------------  272 (348)
T ss_dssp             CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC---------------
T ss_pred             CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC---------------
Confidence            34578999999999853  3568999999999999999999999999888777666655431100               


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 .....+++.+.+||.+||+.||++|||++++++||||...
T Consensus       273 -----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          273 -----------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             -----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence                       0112458899999999999999999999999999999754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.3e-51  Score=387.74  Aligned_cols=264  Identities=26%  Similarity=0.418  Sum_probs=226.1

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC----ccchHHHHHHHHHhcCCCCeeEEEeeeec
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----VNFTALREIKLLKELKSPHIIELIDAFPH   82 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~l~~~~~~   82 (397)
                      ...+.++|++.+.||+|+||+||+|++..+|+.||+|++........    ....+.+|+.+++.++||||+++++++.+
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   86 (321)
T 2a2a_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN   86 (321)
T ss_dssp             CSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             chhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence            45678999999999999999999999999999999999987543322    23457799999999999999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC----cEEEeeecc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGL  157 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~----~~kl~DFG~  157 (397)
                      .+.+|+||||+. |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A           87 RTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            999999999997 588888765 44589999999999999999999999999999999999999888    799999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      +...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+......       
T Consensus       166 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-------  236 (321)
T 2a2a_A          166 AHEIEDG-VEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD-------  236 (321)
T ss_dssp             CEECCTT-CCCCCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC-------
T ss_pred             ceecCcc-ccccccCCCCCccCcccccC-CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc-------
Confidence            9877543 23445678999999999976 56899999999999999999999999988877777665442110       


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                       .....++.++..+.+||.+||..||.+|||++|+++||||...
T Consensus       237 -----------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          237 -----------------FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             -----------------CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             -----------------cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence                             0012234568999999999999999999999999999999754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.3e-52  Score=399.09  Aligned_cols=261  Identities=25%  Similarity=0.372  Sum_probs=204.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|++.+.||+|+||+||+|++..+++.||||++.....   ....+.+|+.+++.++||||++++++|.+.+.+|+|
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   94 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII   94 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence            36899999999999999999999999999999999975432   234677999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc--EEEeeeccceeeCCCCC
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARIFGSPDR  166 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~--~kl~DFG~a~~~~~~~~  166 (397)
                      ||||. |+|...+.... .+++..++.++.||+.||.|||++||+||||||+||||+.++.  +||+|||+++.... ..
T Consensus        95 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~-~~  172 (361)
T 3uc3_A           95 MEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HS  172 (361)
T ss_dssp             EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred             EEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc-cC
Confidence            99997 58888886644 5999999999999999999999999999999999999987765  99999999975432 22


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+||+.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+...+..... .+          
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-~~----------  241 (361)
T 3uc3_A          173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-SI----------  241 (361)
T ss_dssp             --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC-CC----------
T ss_pred             CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-CC----------
Confidence            3345678999999999987554455599999999999999999999876543333333222111100 00          


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 .....+++++++||.+||+.||.+|||++|+++||||...
T Consensus       242 -----------~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          242 -----------PDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             -----------CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             -----------CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence                       0112458999999999999999999999999999999653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=3e-52  Score=413.80  Aligned_cols=264  Identities=33%  Similarity=0.524  Sum_probs=226.0

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ...+.++|.+.+.||+|+||+||+|++..+++.||||++............+.+|+.+|++++||||+++++++.+.+.+
T Consensus        17 ~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   96 (486)
T 3mwu_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF   96 (486)
T ss_dssp             CCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEE
Confidence            34578999999999999999999999999999999999976554444556788999999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc---cCCcEEEeeeccceeeC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG---SHGQLKLADFGLARIFG  162 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~---~~~~~kl~DFG~a~~~~  162 (397)
                      |+|||||. |+|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++...
T Consensus        97 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A           97 YIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            99999998 58888877654 599999999999999999999999999999999999995   45679999999998764


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .. ......+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+..+.+..+.........         
T Consensus       176 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------  243 (486)
T 3mwu_A          176 QN-TKMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL---------  243 (486)
T ss_dssp             CC-----CCTTGGGGCCGGGGGS--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCS---------
T ss_pred             CC-CccCCCcCCCCCCCHHHhCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---------
Confidence            33 33456679999999999976  4899999999999999999999999999888888777654221111         


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                     ..+..+|+++++||.+||+.||.+|||+.|+|+||||+...
T Consensus       244 ---------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          244 ---------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (486)
T ss_dssp             ---------------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred             ---------------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence                           12234689999999999999999999999999999997643

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.9e-52  Score=394.12  Aligned_cols=259  Identities=25%  Similarity=0.431  Sum_probs=196.4

Q ss_pred             hhhhcceeee---eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecC
Q 015948            8 KKVADRYLKR---EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK   83 (397)
Q Consensus         8 ~~~~~~y~i~---~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~   83 (397)
                      ..+.++|.+.   +.||+|+||+||+|++..+|+.||||++...     ......+|+.+++.+. ||||++++++|.++
T Consensus         4 ~~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~   78 (325)
T 3kn6_A            4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQ   78 (325)
T ss_dssp             CHHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             CcchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC
Confidence            3456788886   7899999999999999999999999998643     2335678999999997 99999999999999


Q ss_pred             CeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cEEEeeeccce
Q 015948           84 GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLAR  159 (397)
Q Consensus        84 ~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~kl~DFG~a~  159 (397)
                      ...|+|||||+| +|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||+++
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~  157 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR  157 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred             CEEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence            999999999985 888888765 4599999999999999999999999999999999999998766   89999999999


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-------HHHHHHHHHHhCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-------IDQLGKIFAAFGTAT  232 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~~~  232 (397)
                      ............++|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.       .+.+..+...    .
T Consensus       158 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~----~  232 (325)
T 3kn6_A          158 LKPPDNQPLKTPCFTLHYAAPELLNQ-NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG----D  232 (325)
T ss_dssp             ECCC-----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT----C
T ss_pred             ecCCCCCcccccCCCcCccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC----C
Confidence            87665555667788999999999976 5689999999999999999999999987543       2222222111    0


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      .                    ......++.+++++++||.+||..||.+|||++|+++||||++.
T Consensus       233 ~--------------------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          233 F--------------------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             C--------------------CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             C--------------------CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence            0                    00112223568999999999999999999999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=2.7e-52  Score=398.67  Aligned_cols=289  Identities=37%  Similarity=0.615  Sum_probs=228.1

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc---------cchHHHHHHHHHhcCCCCeeEEEe
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV---------NFTALREIKLLKELKSPHIIELID   78 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~---------~~~~~~E~~~l~~l~hp~iv~l~~   78 (397)
                      ..+.++|.+.+.||+|+||+||+|.+.. |..||||++.........         ...+.+|+.+++.++||||+++++
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   96 (362)
T 3pg1_A           18 HAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD   96 (362)
T ss_dssp             HHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred             HHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence            3468999999999999999999999865 899999999764433221         145779999999999999999999


Q ss_pred             ee-----ecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEe
Q 015948           79 AF-----PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLA  153 (397)
Q Consensus        79 ~~-----~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~  153 (397)
                      +|     .....+|+||||++|+|.+.+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~  176 (362)
T 3pg1_A           97 IFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC  176 (362)
T ss_dssp             EEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             eEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEE
Confidence            98     3445799999999999999999887789999999999999999999999999999999999999999999999


Q ss_pred             eeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948          154 DFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP  233 (397)
Q Consensus       154 DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  233 (397)
                      |||+++..... .......+|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+.+..
T Consensus       177 Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  255 (362)
T 3pg1_A          177 DFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI  255 (362)
T ss_dssp             CTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred             ecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence            99999865332 33445678999999999987667999999999999999999999999999999999999887776543


Q ss_pred             CCCCCCCCC--cccc--ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          234 SQWPDLAYL--PDYV--EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       234 ~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ..+......  .+..  .........+....+..++.+.+||.+||+.||.+|||++|+++||||+...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            211100000  0000  0011122234455667899999999999999999999999999999998753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-51  Score=380.54  Aligned_cols=263  Identities=29%  Similarity=0.424  Sum_probs=216.3

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      +....+.++|.+.+.||+|+||+||+|++..++..+|+|++...... .....+.+|+.+|+.++||||+++++++.+.+
T Consensus        15 ~~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   93 (285)
T 3is5_A           15 YFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH   93 (285)
T ss_dssp             EESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             CCCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCCCchHHhHHHheecCC
Confidence            34556889999999999999999999999999999999999765432 23456778999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE---ccCCcEEEeeecc
Q 015948           85 NLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI---GSHGQLKLADFGL  157 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl---~~~~~~kl~DFG~  157 (397)
                      ..|+||||++ |+|.+.+...   +..+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~  173 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL  173 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence            9999999998 5888877543   4569999999999999999999999999999999999999   4567899999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      +...... .......+++.|+|||++.+  .++.++|||||||++|+|++|..||.+.+..+....+......       
T Consensus       174 a~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-------  243 (285)
T 3is5_A          174 AELFKSD-EHSTNAAGTALYMAPEVFKR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN-------  243 (285)
T ss_dssp             CCC-----------CTTGGGCCHHHHTT--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------
T ss_pred             ceecCCc-ccCcCcccccCcCChHHhcc--CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcc-------
Confidence            9876443 23445678999999999854  5899999999999999999999999988766655544332110       


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                        .......+++++.+||.+||+.||++|||++|+|+||||+.
T Consensus       244 ------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          244 ------------------YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             ------------------CCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ------------------cccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence                              01111235899999999999999999999999999999975

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2.6e-52  Score=397.58  Aligned_cols=284  Identities=37%  Similarity=0.604  Sum_probs=229.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe---
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN---   85 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~---   85 (397)
                      .+.++|.+.+.||+|+||+||+|++..+|+.||||++............+.+|+.+++.++||||+++++++...+.   
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  100 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  100 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence            45789999999999999999999999999999999997654443344567789999999999999999999977654   


Q ss_pred             ---EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           86 ---LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        86 ---~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                         +|+||||++|+|...+..   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       101 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          101 FYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             CCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             ceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence               599999999988776643   48999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ..   .....+|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+......+......
T Consensus       178 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  254 (353)
T 3coi_A          178 AE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK  254 (353)
T ss_dssp             ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred             CC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence            32   345678999999999977667899999999999999999999999999999999988887775543221111100


Q ss_pred             cc--c-cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          243 PD--Y-VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       243 ~~--~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ..  + ..........+...++.+++++.+||.+||..||.+|||++|+++||||....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence            00  0 00001112233455667899999999999999999999999999999998644

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.7e-51  Score=391.30  Aligned_cols=260  Identities=28%  Similarity=0.426  Sum_probs=204.7

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ..+.++|.+.+.||+|+||+||+|++..+++.||||++.....    ...+.+|+.+|+.++||||++++++|.+.+.+|
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  124 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD----KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS  124 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh----HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence            4567899999999999999999999999999999999975432    234668999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---CCcEEEeeeccceeeCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGS  163 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~~~~kl~DFG~a~~~~~  163 (397)
                      +||||+. |+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++....
T Consensus       125 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          125 LVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             EEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             EEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            9999998 5888877654 45999999999999999999999999999999999999975   88999999999987643


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCCCCCCCCCCC
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID-QLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      . ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+..... .+..+.......           
T Consensus       204 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~-----------  270 (349)
T 2w4o_A          204 Q-VLMKTVCGTPGYCAPEILRG-CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF-----------  270 (349)
T ss_dssp             ----------CGGGSCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCC-----------
T ss_pred             c-cccccccCCCCccCHHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCcc-----------
Confidence            2 23345678999999999976 568999999999999999999999998776655 333433221100           


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                   ....++.++.++++||.+||..||++|||+.|+|+||||.+..
T Consensus       271 -------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          271 -------------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             -------------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             -------------CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence                         0122345689999999999999999999999999999998643

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3e-52  Score=415.51  Aligned_cols=262  Identities=26%  Similarity=0.378  Sum_probs=223.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|.+.+.||+|+||+||+|+++.+|+.||||++.+.... ......+.+|+.+|+.++||||++++++|.+.+.+|+
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence            458899999999999999999999999999999999765422 2334467789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           89 VFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      |||||+ |+|...+...   ...+++..++.|+.||+.||.|||++||+||||||+||||+.+|++||+|||+++.....
T Consensus       263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~  342 (543)
T 3c4z_A          263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG  342 (543)
T ss_dssp             EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence            999998 5888887654   345999999999999999999999999999999999999999999999999999987655


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHHHhCCCCCCCCCCCC
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD----IDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      .......+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+.    .+....+....            
T Consensus       343 ~~~~~~~~GT~~Y~APE~l~~-~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~------------  409 (543)
T 3c4z_A          343 QTKTKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA------------  409 (543)
T ss_dssp             CCCBCCCCSCTTTSCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC------------
T ss_pred             CcccccccCCccccChhhhcC-CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc------------
Confidence            544556689999999999977 6799999999999999999999999987642    33333333210            


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP  300 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~  300 (397)
                                      ..+.+.+|+++++||.+||+.||.+||+     ++++++||||.+..|.
T Consensus       410 ----------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~  458 (543)
T 3c4z_A          410 ----------------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR  458 (543)
T ss_dssp             ----------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHH
T ss_pred             ----------------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHH
Confidence                            0112356899999999999999999996     5899999999987653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2.4e-52  Score=417.30  Aligned_cols=262  Identities=26%  Similarity=0.405  Sum_probs=221.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|.+.+.||+|+||.||+|++..+|+.||||++.+... .......+.+|+.+|+.++||||++++++|.+.+.+|+
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            46789999999999999999999999999999999976532 22334457789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           89 VFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      |||||. |+|...+...+ ..+++..++.|+.||+.||.|||++||+||||||+||||+.+|++||+|||+++...... 
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-  340 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-  340 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc-
Confidence            999997 68888877643 349999999999999999999999999999999999999999999999999998775432 


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---IDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .....+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+.   ...+........    .         
T Consensus       341 ~~~~~~GT~~Y~APEvl~~-~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~----~---------  406 (576)
T 2acx_A          341 TIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP----E---------  406 (576)
T ss_dssp             CEECCCSCGGGCCHHHHTT-CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC----C---------
T ss_pred             cccccCCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc----c---------
Confidence            3445689999999999976 5689999999999999999999999987643   222222222210    0         


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP  300 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~  300 (397)
                                    .+...+|+++++||.+||+.||.+||     +++|+++||||++..|.
T Consensus       407 --------------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~  454 (576)
T 2acx_A          407 --------------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK  454 (576)
T ss_dssp             --------------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHH
T ss_pred             --------------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHH
Confidence                          11234689999999999999999999     79999999999987653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3e-51  Score=385.25  Aligned_cols=256  Identities=24%  Similarity=0.428  Sum_probs=219.2

Q ss_pred             ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      .|...+.||+|+||+||+|++..+|+.||||++.....  .....+.+|+.+++.++||||++++++|...+..|+||||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence            48888999999999999999999999999999975432  2344577999999999999999999999999999999999


Q ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        93 ~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ++| +|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............
T Consensus       124 ~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~  201 (321)
T 2c30_A          124 LQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  201 (321)
T ss_dssp             CCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred             CCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence            985 67776654  349999999999999999999999999999999999999999999999999998876554455667


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV  251 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
                      .||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+......    .+               
T Consensus       202 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~----~~---------------  261 (321)
T 2c30_A          202 VGTPYWMAPEVISR-SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP----KL---------------  261 (321)
T ss_dssp             CSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC----CC---------------
T ss_pred             cCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----Cc---------------
Confidence            89999999999976 56899999999999999999999999988777766665442110    00               


Q ss_pred             cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                            .....+++++.+||.+||+.||++|||++|+++||||....
T Consensus       262 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          262 ------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             ------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence                  01123588999999999999999999999999999997644

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=7.7e-52  Score=407.75  Aligned_cols=261  Identities=29%  Similarity=0.450  Sum_probs=225.9

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      +....++|.+.+.||+|+||+||+|++..+|+.||||++...... ......+.+|+.+|+.++||||+++++++.+.+.
T Consensus        11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~   90 (476)
T 2y94_A           11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD   90 (476)
T ss_dssp             SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            445678999999999999999999999999999999999765322 2334467899999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|+|||||+ |+|.+++.+ +..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        91 ~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A           91 IFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             EEEEEECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             EEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            999999997 588887765 446999999999999999999999999999999999999999999999999999886543


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                       ......+||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+.......+.....               
T Consensus       170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------  233 (476)
T 2y94_A          170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF---------------  233 (476)
T ss_dssp             -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC---------------
T ss_pred             -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc---------------
Confidence             3345678999999999998755568899999999999999999999999888777777654311               


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                   .....+++++.+||.+||+.||.+|||++|+++||||...
T Consensus       234 -------------~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          234 -------------YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             -------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             -------------CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence                         0112358999999999999999999999999999999764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=5.9e-52  Score=411.60  Aligned_cols=263  Identities=34%  Similarity=0.561  Sum_probs=227.3

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ...+.++|++.+.||+|+||+||+|++..+|+.||||++...... ......+.+|+.+|++++||||++++++|.+.+.
T Consensus        21 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  100 (484)
T 3nyv_A           21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY  100 (484)
T ss_dssp             CCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            345789999999999999999999999999999999999766533 3344567899999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE---ccCCcEEEeeeccceee
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI---GSHGQLKLADFGLARIF  161 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl---~~~~~~kl~DFG~a~~~  161 (397)
                      +|+|||||. |+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.+
T Consensus       101 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          101 FYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF  179 (484)
T ss_dssp             EEEEECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred             EEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence            999999998 5888887764 459999999999999999999999999999999999999   46789999999999876


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ... ......+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+..+.+..+.........        
T Consensus       180 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--------  248 (484)
T 3nyv_A          180 EAS-KKMKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL--------  248 (484)
T ss_dssp             CCC-CSHHHHTTGGGTCCHHHHHT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--------
T ss_pred             ccc-cccccCCCCccccCceeecC--CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence            543 34456679999999999976  5899999999999999999999999999888888777664221111        


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                      ..+..+|+++++||.+||+.||.+|||+.|+|+||||+..
T Consensus       249 ----------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          249 ----------------PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             ----------------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             ----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence                            1223458999999999999999999999999999999754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=4.3e-52  Score=398.74  Aligned_cols=260  Identities=29%  Similarity=0.445  Sum_probs=218.0

Q ss_pred             hhcceee--eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLK--REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i--~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      +.+.|.+  .+.||+|+||.||+|++..+|+.||+|++.....  .....+.+|+.+|+.++||||++++++|.+.+.+|
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  162 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIV  162 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            3455665  6789999999999999999999999999976432  22346779999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE--ccCCcEEEeeeccceeeCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI--GSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl--~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|||||+ |+|.+.+......+++..++.++.||+.||+|||++||+||||||+|||+  +.++.+||+|||+++.....
T Consensus       163 lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~  242 (373)
T 2x4f_A          163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR  242 (373)
T ss_dssp             EEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence            9999998 58888887766679999999999999999999999999999999999999  56678999999999887543


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      . .....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.++.+.+..+........            
T Consensus       243 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~------------  308 (373)
T 2x4f_A          243 E-KLKVNFGTPEFLAPEVVNY-DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE------------  308 (373)
T ss_dssp             C-BCCCCCSSCTTCCHHHHTT-CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSC------------
T ss_pred             c-ccccccCCCcEeChhhccC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC------------
Confidence            3 3445678999999999876 5689999999999999999999999999988888888776421111            


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                  ...++.+++++++||.+||+.||.+|||++|+|+||||...
T Consensus       309 ------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          309 ------------DEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             ------------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             ------------hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence                        12234568999999999999999999999999999999764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.5e-51  Score=410.56  Aligned_cols=263  Identities=32%  Similarity=0.509  Sum_probs=223.1

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-----------CccchHHHHHHHHHhcCCCCeeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-----------GVNFTALREIKLLKELKSPHIIE   75 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-----------~~~~~~~~E~~~l~~l~hp~iv~   75 (397)
                      ...+.++|.+.+.||+|+||+||+|+++.+++.||||++.......           .....+.+|+.+|+.++||||++
T Consensus        31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  110 (504)
T 3q5i_A           31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK  110 (504)
T ss_dssp             CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred             CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            3457899999999999999999999999999999999998654321           23456778999999999999999


Q ss_pred             EEeeeecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cEE
Q 015948           76 LIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLK  151 (397)
Q Consensus        76 l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~k  151 (397)
                      ++++|.+.+.+|+|||||. |+|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++   .+|
T Consensus       111 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~k  189 (504)
T 3q5i_A          111 LFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK  189 (504)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred             EEEEEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEE
Confidence            9999999999999999998 58888887654 499999999999999999999999999999999999999876   699


Q ss_pred             EeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          152 LADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       152 l~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      |+|||+++..... ......+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+..+.+..+.......
T Consensus       190 l~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  266 (504)
T 3q5i_A          190 IVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF  266 (504)
T ss_dssp             ECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             EEECCCCEEcCCC-CccccccCCcCCCCHHHhcc--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999999877543 34456779999999999864  58999999999999999999999999998888887776531111


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      .                        ...++.+|+++++||.+||+.||.+|||++|+|+||||+..
T Consensus       267 ~------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          267 D------------------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             C------------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred             C------------------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence            0                        12234568999999999999999999999999999999753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.4e-52  Score=391.58  Aligned_cols=291  Identities=34%  Similarity=0.633  Sum_probs=225.6

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee-----
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-----   81 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-----   81 (397)
                      +..+.++|++.+.||+|+||+||+|++..+|+.||+|++....  ......+.+|+.+++.++||||+++++++.     
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   83 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ   83 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCB
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccc
Confidence            4567899999999999999999999999999999999987542  223345778999999999999999998873     


Q ss_pred             ---------cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc-cCCcEE
Q 015948           82 ---------HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-SHGQLK  151 (397)
Q Consensus        82 ---------~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~-~~~~~k  151 (397)
                               +...+|+||||++|+|.+.+..  ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+|
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           84 LTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             CCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEE
T ss_pred             cccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEE
Confidence                     4468999999999999998865  3589999999999999999999999999999999999997 567999


Q ss_pred             EeeeccceeeCCCC---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015948          152 LADFGLARIFGSPD---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF  228 (397)
Q Consensus       152 l~DFG~a~~~~~~~---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~  228 (397)
                      |+|||+++......   .......++.+|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  241 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI  241 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            99999998764321   223445678899999998776679999999999999999999999999999888888887765


Q ss_pred             CCCCCCCCCCCC-CCccccccc-cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          229 GTATPSQWPDLA-YLPDYVEYQ-YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       229 ~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                      .......+.... ..+.+.... .....++....+.++.++++||.+||+.||.+|||++|+++||||+...++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~  316 (320)
T 2i6l_A          242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM  316 (320)
T ss_dssp             CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred             CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence            432211111000 000000000 0112233455677899999999999999999999999999999998766554

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.6e-52  Score=403.10  Aligned_cols=286  Identities=28%  Similarity=0.458  Sum_probs=224.3

Q ss_pred             cccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC--------CCCeeE
Q 015948            4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--------SPHIIE   75 (397)
Q Consensus         4 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~--------hp~iv~   75 (397)
                      +.++..+.++|++.+.||+|+||+||+|++..+++.||||++...   ......+.+|+.+|+.++        |+||++
T Consensus        29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            345667789999999999999999999999999999999998643   223345778999999996        788999


Q ss_pred             EEeeee----cCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCC-
Q 015948           76 LIDAFP----HKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHG-  148 (397)
Q Consensus        76 l~~~~~----~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~-  148 (397)
                      ++++|.    ...++|+||||++|+|+..+.... ..+++..++.++.||+.||.|||++ ||+||||||+||||+.++ 
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~  185 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQ  185 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHH
T ss_pred             eecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccch
Confidence            999997    567899999999999998887654 5699999999999999999999998 999999999999998775 


Q ss_pred             ------------------------------------------------cEEEeeeccceeeCCCCCcccccccCceeeCh
Q 015948          149 ------------------------------------------------QLKLADFGLARIFGSPDRRFTHQVFARWYRAP  180 (397)
Q Consensus       149 ------------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aP  180 (397)
                                                                      .+||+|||+++....   .....+||+.|+||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~---~~~~~~gt~~y~aP  262 (397)
T 1wak_A          186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK---HFTEDIQTRQYRSL  262 (397)
T ss_dssp             HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB---CSCSCCSCGGGCCH
T ss_pred             hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc---cCccCCCCCcccCC
Confidence                                                            799999999987643   24556789999999


Q ss_pred             hcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCCCCCCCCCCCCcccc----cccc
Q 015948          181 ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS------DIDQLGKIFAAFGTATPSQWPDLAYLPDYV----EYQY  250 (397)
Q Consensus       181 E~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~  250 (397)
                      |++.+ ..++.++|||||||++|+|++|.+||.+.+      ..+.+..+...++..+...+........+.    ....
T Consensus       263 E~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  341 (397)
T 1wak_A          263 EVLIG-SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH  341 (397)
T ss_dssp             HHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred             hhhcC-CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence            99987 558999999999999999999999998765      456677777776654321110000000000    0000


Q ss_pred             ccC-CCc---------cccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          251 VAA-PPL---------RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       251 ~~~-~~~---------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ... .+.         .......+.++++||.+||+.||++|||++|+|+||||++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            000 000         0011123567899999999999999999999999999963

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.6e-51  Score=378.74  Aligned_cols=265  Identities=29%  Similarity=0.478  Sum_probs=222.9

Q ss_pred             CccccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeee
Q 015948            2 AEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAF   80 (397)
Q Consensus         2 ~~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~   80 (397)
                      .+.+-.....++|.+.+.||+|+||+||+|++..++..||+|++..... .......+.+|+.+++.++||||+++++++
T Consensus         4 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   83 (284)
T 2vgo_A            4 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF   83 (284)
T ss_dssp             ------CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhCCccchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE
Confidence            3444455567899999999999999999999999999999999976432 223345678899999999999999999999


Q ss_pred             ecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           81 PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        81 ~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      .+.+.+|+||||++ |+|.+.+...+ .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        84 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A           84 HDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV  162 (284)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EcCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccc
Confidence            99999999999998 58888887654 58999999999999999999999999999999999999999999999999997


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .....  ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+..+....+.....          
T Consensus       163 ~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----------  229 (284)
T 2vgo_A          163 HAPSL--RRRTMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL----------  229 (284)
T ss_dssp             ECSSS--CBCCCCSCGGGCCHHHHTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC----------
T ss_pred             cCccc--ccccccCCCCcCCHHHhcc-CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcccc----------
Confidence            76432  2345678899999999976 5689999999999999999999999998877766655543200          


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                        .+.+.++.++++||.+||..||.+|||++++++||||....
T Consensus       230 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          230 ------------------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             ------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             ------------------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence                              11234589999999999999999999999999999997543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=3e-51  Score=376.81  Aligned_cols=259  Identities=31%  Similarity=0.466  Sum_probs=222.7

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ..+.++|++.+.||+|+||+||+|.+..++..||+|++.....  .....+.+|+.+++.++||||++++++|.+.+..|
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (277)
T 3f3z_A            5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY   82 (277)
T ss_dssp             -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE
Confidence            4578899999999999999999999999999999999876433  22446788999999999999999999999999999


Q ss_pred             EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE---ccCCcEEEeeeccceeeCC
Q 015948           88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI---GSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl---~~~~~~kl~DFG~a~~~~~  163 (397)
                      +||||++| +|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        83 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           83 LVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             EEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             EEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            99999984 8878776644 48999999999999999999999999999999999999   7889999999999987654


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . .......+|+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+..+....+........           
T Consensus       162 ~-~~~~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------  227 (277)
T 3f3z_A          162 G-KMMRTKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP-----------  227 (277)
T ss_dssp             T-SCBCCCCSCTTTCCHHHHTT--CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----------
T ss_pred             c-cchhccCCCCCccChHHhcc--cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-----------
Confidence            3 34455678999999999865  489999999999999999999999999888777777655321111           


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                   ...+..+++++.+||.+||+.||.+|||+.++|+||||+.
T Consensus       228 -------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~  267 (277)
T 3f3z_A          228 -------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK  267 (277)
T ss_dssp             -------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred             -------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence                         1122345899999999999999999999999999999975

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=3.5e-51  Score=379.76  Aligned_cols=266  Identities=25%  Similarity=0.376  Sum_probs=226.9

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      +.....++|.+.+.||+|+||+||+|.+..+++.||+|++...... ......+.+|+.+++.++||||+++++++.+.+
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   88 (294)
T 2rku_A            9 VDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND   88 (294)
T ss_dssp             EETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             eCCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence            3456788999999999999999999999999999999999765422 223445778999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      .+|+||||++ ++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        89 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  167 (294)
T 2rku_A           89 FVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  167 (294)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence            9999999998 5777776654 4599999999999999999999999999999999999999999999999999988765


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+....+....+....               
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---------------  231 (294)
T 2rku_A          168 DGERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE---------------  231 (294)
T ss_dssp             TTCCBCCCCSCCSSCCHHHHTT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC---------------
T ss_pred             CccccccccCCCCcCCcchhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhcc---------------
Confidence            5555556778999999999976 568999999999999999999999999887766655543210               


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT  301 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~  301 (397)
                                   ..+...+++.+.+||.+||+.||++|||++|+++||||.+...+.
T Consensus       232 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~  276 (294)
T 2rku_A          232 -------------YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  276 (294)
T ss_dssp             -------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             -------------CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcCC
Confidence                         011234588999999999999999999999999999998765443

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.4e-51  Score=375.94  Aligned_cols=259  Identities=28%  Similarity=0.464  Sum_probs=196.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+++.++||||+++++++.+.+..|+
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            35789999999999999999999999999999999975432 22233567789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||++ ++|..++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  168 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK  168 (278)
T ss_dssp             EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred             EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc
Confidence            999997 5888888877677999999999999999999999999999999999999999999999999999887654444


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      .....+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+....+..+..       .             
T Consensus       169 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------~-------------  227 (278)
T 3cok_A          169 HYTLCGTPNYISPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL-------A-------------  227 (278)
T ss_dssp             ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS-------S-------------
T ss_pred             ceeccCCCCcCCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh-------c-------------
Confidence            455678999999999876 5688999999999999999999999987654332221100       0             


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                              .......++.++.+||.+||..||++|||++++++||||...
T Consensus       228 --------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          228 --------DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             --------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             --------ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence                    001223468999999999999999999999999999999763

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=4.9e-51  Score=376.76  Aligned_cols=259  Identities=21%  Similarity=0.326  Sum_probs=214.8

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK   83 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~   83 (397)
                      .....+.++|++.+.||+|+||+||+|++..+++.||||++............+.+|+.++..+ +||||+++++++.+.
T Consensus         4 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~   83 (289)
T 1x8b_A            4 GMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED   83 (289)
T ss_dssp             -CCCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET
T ss_pred             cccccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence            3456788999999999999999999999999999999999987655444556678899999999 999999999999999


Q ss_pred             CeEEEEEEcccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-----------
Q 015948           84 GNLHLVFEFMET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-----------  148 (397)
Q Consensus        84 ~~~~lv~e~~~g-~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-----------  148 (397)
                      +.+|+||||++| +|.+++...   ...+++..++.++.||+.||.|||++||+||||||+|||++.++           
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            999999999974 898888764   25589999999999999999999999999999999999998544           


Q ss_pred             --------cEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015948          149 --------QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ  220 (397)
Q Consensus       149 --------~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  220 (397)
                              .+||+|||++.......    ...+|+.|+|||++.+...++.++|||||||++|+|++|.+++.....   
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---  236 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---  236 (289)
T ss_dssp             ------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---
T ss_pred             ccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---
Confidence                    79999999998865433    345888999999998755677899999999999999999988755432   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      ...+...                           ....+...+++++.+||.+||+.||.+|||+.|+++||||.+.
T Consensus       237 ~~~~~~~---------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          237 WHEIRQG---------------------------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             HHHHHTT---------------------------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             HHHHHcC---------------------------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            2222211                           0012223568999999999999999999999999999999863

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.5e-51  Score=384.51  Aligned_cols=267  Identities=27%  Similarity=0.376  Sum_probs=211.6

Q ss_pred             ccChhhhcceeee-eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948            5 DLSKKVADRYLKR-EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH   82 (397)
Q Consensus         5 ~~~~~~~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~   82 (397)
                      .++..+.++|.+. +.||+|+||+||+|++..+++.||||++....  ......+.+|+.+|+++ +||||+++++++.+
T Consensus         5 ~~~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~   82 (316)
T 2ac3_A            5 SFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEE   82 (316)
T ss_dssp             SSCCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             ccCcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            4566788999995 78999999999999999999999999997543  23345678999999985 79999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc---EEEeeeccc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLA  158 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~---~kl~DFG~a  158 (397)
                      ++.+|+||||+. |+|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||++
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~  161 (316)
T 2ac3_A           83 EDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG  161 (316)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred             CCEEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence            999999999998 68888887654 5899999999999999999999999999999999999998776   999999999


Q ss_pred             eeeCCCC-------CcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---------
Q 015948          159 RIFGSPD-------RRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI---------  218 (397)
Q Consensus       159 ~~~~~~~-------~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---------  218 (397)
                      .......       ......+||+.|+|||++.+    ...++.++|||||||++|+|++|.+||.+....         
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  241 (316)
T 2ac3_A          162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA  241 (316)
T ss_dssp             C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred             cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence            7653221       12234568999999999864    134789999999999999999999999876431         


Q ss_pred             ------HHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCC
Q 015948          219 ------DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR  292 (397)
Q Consensus       219 ------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp  292 (397)
                            .....+.....                        ......+..++.++++||.+||+.||.+|||++|+++||
T Consensus       242 ~~~~~~~~~~~i~~~~~------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp  297 (316)
T 2ac3_A          242 CPACQNMLFESIQEGKY------------------------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP  297 (316)
T ss_dssp             CHHHHHHHHHHHHHCCC------------------------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred             chhHHHHHHHHHhccCc------------------------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence                  12222221100                        000112245689999999999999999999999999999


Q ss_pred             CCCCCC
Q 015948          293 YFSSAP  298 (397)
Q Consensus       293 ~~~~~~  298 (397)
                      ||++..
T Consensus       298 ~~~~~~  303 (316)
T 2ac3_A          298 WVQGCA  303 (316)
T ss_dssp             TCC---
T ss_pred             hhcCCC
Confidence            998643

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.2e-52  Score=392.23  Aligned_cols=267  Identities=27%  Similarity=0.424  Sum_probs=219.7

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ..+.++|++.+.||+|+||+||+|++..+++.||+|++.....   .......+.+|+.+++.++||||++++++|.+.+
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            4578999999999999999999999999999999999976432   2334456788999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 015948           85 NLHLVFEFME-TDLETVIRNT---------------------------------------NIFLSPADIKSYMQMTLKGL  124 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~---------------------------------------~~~l~~~~~~~~~~qil~aL  124 (397)
                      .+|+|||||+ |+|.+.+...                                       ...+++..++.++.||+.||
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            9999999997 5888777421                                       11246788999999999999


Q ss_pred             HHhHhCCccccCCCCCcEEEccCC--cEEEeeeccceeeCCCC----CcccccccCceeeChhcccCc-cCCCCcchHHH
Q 015948          125 AFCHKKWVLHRDMKPNNLLIGSHG--QLKLADFGLARIFGSPD----RRFTHQVFARWYRAPELLFGA-KQYGAGVDVWA  197 (397)
Q Consensus       125 ~~lH~~~ivHrDlkp~NILl~~~~--~~kl~DFG~a~~~~~~~----~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwS  197 (397)
                      +|||++||+||||||+||||+.++  .+||+|||+++.+....    .......||+.|+|||++.+. ..++.++||||
T Consensus       182 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws  261 (345)
T 3hko_A          182 HYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS  261 (345)
T ss_dssp             HHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred             HHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence            999999999999999999998776  89999999998764322    123456789999999998642 56899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCc
Q 015948          198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTY  277 (397)
Q Consensus       198 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~  277 (397)
                      |||++|+|++|..||.+.+..+....+........                        ...+..+++++.+||.+||+.
T Consensus       262 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~l~~  317 (345)
T 3hko_A          262 AGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE------------------------NPNYNVLSPLARDLLSNLLNR  317 (345)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTT------------------------SGGGGGSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccC------------------------CcccccCCHHHHHHHHHHcCC
Confidence            99999999999999999988888877765321111                        111223589999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 015948          278 DPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       278 dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ||.+|||+.++|+||||++..
T Consensus       318 ~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          318 NVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             CTTTSCCHHHHHHSHHHHTTS
T ss_pred             ChhHCCCHHHHhcChhhccCh
Confidence            999999999999999998643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.6e-51  Score=387.95  Aligned_cols=254  Identities=23%  Similarity=0.329  Sum_probs=215.8

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------ccchHHHHHHHHHhcCCCCeeEEEeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELKSPHIIELIDAF   80 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~l~~~~   80 (397)
                      ...+.++|++.+.||+|+||+||+|++..+++.||||++........      ....+.+|+.+|+.++||||++++++|
T Consensus        19 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~   98 (335)
T 3dls_A           19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF   98 (335)
T ss_dssp             TTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            34578899999999999999999999999999999999987653222      333566899999999999999999999


Q ss_pred             ecCCeEEEEEEccc-c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           81 PHKGNLHLVFEFME-T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        81 ~~~~~~~lv~e~~~-g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                      .+.+.+|+||||+. | +|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        99 ~~~~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a  177 (335)
T 3dls_A           99 ENQGFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA  177 (335)
T ss_dssp             ECSSEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             eeCCEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence            99999999999986 5 777777654 45999999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      +...... .....+||+.|+|||++.+...++.++|||||||++|+|++|..||.......      .            
T Consensus       178 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~------------  238 (335)
T 3dls_A          178 AYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV------E------------  238 (335)
T ss_dssp             EECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT------T------------
T ss_pred             eECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH------h------------
Confidence            8775433 34456789999999999875555889999999999999999999996532100      0            


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                      ........+++++.+||.+||+.||++|||++++++||||+.
T Consensus       239 ----------------~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          239 ----------------AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             ----------------TCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             ----------------hccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence                            000111235899999999999999999999999999999976

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=3.8e-51  Score=386.86  Aligned_cols=263  Identities=25%  Similarity=0.373  Sum_probs=226.1

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ....++|.+.+.||+|+||.||+|++..+++.||+|++...... ......+.+|+.+++.++||||+++++++.+.+.+
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  116 (335)
T 2owb_A           37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV  116 (335)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeE
Confidence            44578999999999999999999999999999999999765422 22344577899999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       117 ~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          117 FVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             EEEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence            99999998 5777776654 459999999999999999999999999999999999999999999999999999876555


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      .......|++.|+|||++.+ ..++.++|||||||++|+|++|..||......+....+.....                
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----------------  258 (335)
T 2owb_A          196 ERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY----------------  258 (335)
T ss_dssp             CCBCCCCSCCSSCCHHHHHT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC----------------
T ss_pred             ccccccCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCC----------------
Confidence            55556778999999999976 5689999999999999999999999998877666655544210                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                                  .+...+++++.+||.+||+.||++|||++|+++||||.+...+
T Consensus       259 ------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~  301 (335)
T 2owb_A          259 ------------SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP  301 (335)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred             ------------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCcc
Confidence                        1112458899999999999999999999999999999876543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=2.6e-51  Score=394.87  Aligned_cols=284  Identities=30%  Similarity=0.534  Sum_probs=224.6

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CC-----CeeEEEeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SP-----HIIELIDAF   80 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp-----~iv~l~~~~   80 (397)
                      +..+.++|++.+.||+|+||+||+|++..+++.||||++....   .....+.+|+.+++.++ |+     +|++++++|
T Consensus        49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  125 (382)
T 2vx3_A           49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF  125 (382)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred             CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH---HHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence            4567899999999999999999999999999999999986432   22334567889988885 44     499999999


Q ss_pred             ecCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhH--hCCccccCCCCCcEEEc--cCCcEEEeee
Q 015948           81 PHKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCH--KKWVLHRDMKPNNLLIG--SHGQLKLADF  155 (397)
Q Consensus        81 ~~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH--~~~ivHrDlkp~NILl~--~~~~~kl~DF  155 (397)
                      ...+.+|+||||++|+|.+++.... ..+++..++.++.||+.||.|||  ++||+||||||+||||+  .++.+||+||
T Consensus       126 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DF  205 (382)
T 2vx3_A          126 MFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF  205 (382)
T ss_dssp             EETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred             ccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence            9999999999999999999998764 45999999999999999999999  57999999999999995  4778999999


Q ss_pred             ccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          156 GLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       156 G~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      |+++.....   ....++|+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+..+.+..+...++.+....
T Consensus       206 G~a~~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~  281 (382)
T 2vx3_A          206 GSSCQLGQR---IYQYIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI  281 (382)
T ss_dssp             TTCEETTCC---CCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             cCceecccc---cccccCCccccChHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            999886432   345678999999999987 5689999999999999999999999999999999999998877654322


Q ss_pred             CCCCCCCccccc------cc---------cccCCC---ccccC-----------CC-------CCHHHHHHHHHhcCcCC
Q 015948          236 WPDLAYLPDYVE------YQ---------YVAAPP---LRSLF-----------PS-------ASDDALDLLSKMFTYDP  279 (397)
Q Consensus       236 ~~~~~~~~~~~~------~~---------~~~~~~---~~~~~-----------~~-------~s~~~~~li~~~L~~dP  279 (397)
                      ++..........      +.         ....+.   +....           ..       .++++++||.+||+.||
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP  361 (382)
T 2vx3_A          282 LDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDP  361 (382)
T ss_dssp             HTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCT
T ss_pred             HHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCCh
Confidence            211100000000      00         000000   00000           00       01478999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 015948          280 KARITAQQALEHRYFSSA  297 (397)
Q Consensus       280 ~~R~t~~e~l~hp~~~~~  297 (397)
                      ++|||++|+|+||||+..
T Consensus       362 ~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          362 KTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TTSCCHHHHTTSGGGCC-
T ss_pred             hhCCCHHHHhcCcccccC
Confidence            999999999999999864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=3.3e-51  Score=378.84  Aligned_cols=260  Identities=25%  Similarity=0.359  Sum_probs=202.8

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|++.+.||+|+||+||+|++..+|+.||+|++............+.++..+++.++||||+++++++.+++..|+|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            46899999999999999999999999999999999976543333333344555668889999999999999999999999


Q ss_pred             EEccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           90 FEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        90 ~e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |||++|+|...+..   .+..+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++......
T Consensus        85 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  164 (290)
T 3fme_A           85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV  164 (290)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred             EehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence            99999988776654   456799999999999999999999998 99999999999999999999999999998764432


Q ss_pred             CcccccccCceeeChhcc---cCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 RRFTHQVFARWYRAPELL---FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l---~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                       ......+|+.|+|||++   .....++.++|||||||++|+|++|..||.... ....+..+.......          
T Consensus       165 -~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------  233 (290)
T 3fme_A          165 -AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ----------  233 (290)
T ss_dssp             ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC----------
T ss_pred             -cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC----------
Confidence             23345688999999997   344668999999999999999999999998743 344444433321100          


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                      .....+++++.+||.+||+.||++|||++|+++||||+.
T Consensus       234 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          234 ----------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             ----------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ----------------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence                            011245899999999999999999999999999999964

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=5.7e-51  Score=394.54  Aligned_cols=256  Identities=25%  Similarity=0.420  Sum_probs=203.7

Q ss_pred             hhhcceeee-eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHH-hcCCCCeeEEEeeeec----
Q 015948            9 KVADRYLKR-EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK-ELKSPHIIELIDAFPH----   82 (397)
Q Consensus         9 ~~~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~-~l~hp~iv~l~~~~~~----   82 (397)
                      .+.++|.+. +.||+|+||+||+|++..+|+.||||++...       ..+.+|+.++. ..+||||++++++|..    
T Consensus        58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~  130 (400)
T 1nxk_A           58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG  130 (400)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred             cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence            356778776 7899999999999999999999999998632       24668998875 4589999999999865    


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---CCcEEEeeecc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGL  157 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~~~~kl~DFG~  157 (397)
                      .+++|+|||||. |+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||||+.   ++.+||+|||+
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence            668999999998 58999887653 35999999999999999999999999999999999999997   78899999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHHHHhCCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID----QLGKIFAAFGTATP  233 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~~~~i~~~~~~~~~  233 (397)
                      ++..... ......+||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+...    ....+.......  
T Consensus       211 a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~--  286 (400)
T 1nxk_A          211 AKETTSH-NSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF--  286 (400)
T ss_dssp             CEECC------------CTTCCGGGSCC-CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC--
T ss_pred             ccccCCC-CccccCCCCCCccCHhhcCC-CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC--
Confidence            9876432 33456788999999999966 678999999999999999999999998765322    222222210000  


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                            ....+..++.++++||.+||+.||.+|||++|+++||||...
T Consensus       287 ----------------------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          287 ----------------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             ----------------------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ----------------------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence                                  011234568999999999999999999999999999999754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.4e-51  Score=378.00  Aligned_cols=257  Identities=26%  Similarity=0.451  Sum_probs=217.4

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ...++|++.+.||+|+||+||+|++..++..||+|++..... .......+.+|+.+++.++||||++++++|.+.+..|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (279)
T 3fdn_A            6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY   85 (279)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence            356899999999999999999999999999999999875432 2233445778999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||++ |+|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....  .
T Consensus        86 lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~--~  162 (279)
T 3fdn_A           86 LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--S  162 (279)
T ss_dssp             EEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc--c
Confidence            9999998 57888777653 499999999999999999999999999999999999999999999999999865433  2


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+.....                 
T Consensus       163 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------  224 (279)
T 3fdn_A          163 RRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----------------  224 (279)
T ss_dssp             -----CCCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-----------------
T ss_pred             cccccCCCCCccCHhHhcc-CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCC-----------------
Confidence            3345678899999999976 5688999999999999999999999998877776666544211                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 .....+++++.+||.+||+.||.+|||+.|+++||||+..
T Consensus       225 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          225 -----------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             -----------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence                       1112358899999999999999999999999999999764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=3.4e-51  Score=385.97  Aligned_cols=279  Identities=32%  Similarity=0.580  Sum_probs=217.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeec--CCeE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPH--KGNL   86 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~--~~~~   86 (397)
                      ..++|++.+.||+|+||+||+|++..+++.||||++...     ....+.+|+.+++.++ ||||+++++++.+  ....
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence            368999999999999999999999999999999998632     2346789999999997 9999999999987  6789


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSP  164 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~  164 (397)
                      ++||||+.| +|...+..    +++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.....
T Consensus       109 ~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  184 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  184 (330)
T ss_dssp             EEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             EEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence            999999995 66666543    89999999999999999999999999999999999999777 8999999999876543


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCC-CCCCcHHHHHHHHHHhCCCCCCCCCC---CC
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFL-QGSSDIDQLGKIFAAFGTATPSQWPD---LA  240 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~---~~  240 (397)
                       .......+++.|+|||++.+...++.++|||||||++|+|++|..|| .+.+..+.+..+...++......+.+   ..
T Consensus       185 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  263 (330)
T 3nsz_A          185 -QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  263 (330)
T ss_dssp             -CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             -CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence             33455678999999999987677999999999999999999999777 45555666666655544211000000   00


Q ss_pred             CCcccccc-ccccCCCccc-----cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          241 YLPDYVEY-QYVAAPPLRS-----LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       241 ~~~~~~~~-~~~~~~~~~~-----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ..+..... .......+..     ....+++++++||.+||+.||.+|||++|+|+||||++..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence            00000000 0000000011     1123689999999999999999999999999999998754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=7.9e-51  Score=392.39  Aligned_cols=259  Identities=27%  Similarity=0.370  Sum_probs=210.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC--CCCeeEEEeeeecCCeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~l~~~~~~~~~~~l   88 (397)
                      .++|.+.+.||+|+||+||+|.+.. ++.||||++............+.+|+.+|+.++  ||||+++++++..++.+|+
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            4569999999999999999999865 899999999876544444456789999999997  4999999999999999999


Q ss_pred             EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--
Q 015948           89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--  166 (397)
Q Consensus        89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--  166 (397)
                      |||+.+|+|.+++.... .+++..++.++.||+.||.|||++||+||||||+||||+ ++.+||+|||+++.+.....  
T Consensus       134 v~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~  211 (390)
T 2zmd_A          134 VMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV  211 (390)
T ss_dssp             EEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred             EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence            99987789999988754 589999999999999999999999999999999999995 68899999999987643322  


Q ss_pred             cccccccCceeeChhcccC----------ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCCCC
Q 015948          167 RFTHQVFARWYRAPELLFG----------AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~----------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~  235 (397)
                      .....+||+.|+|||++.+          ...|+.++|||||||++|||++|.+||.+..+. ..+..+...   .....
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~---~~~~~  288 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP---NHEIE  288 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCT---TSCCC
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCc---cccCC
Confidence            2345679999999999865          135899999999999999999999999876543 333333221   11101


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                             .....+.++.+||.+||+.||.+|||+.|+|+||||....
T Consensus       289 -----------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          289 -----------------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             -----------------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             -----------------------CCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence                                   1122378999999999999999999999999999997543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.9e-50  Score=378.23  Aligned_cols=266  Identities=29%  Similarity=0.461  Sum_probs=217.0

Q ss_pred             ccccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec
Q 015948            3 EVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH   82 (397)
Q Consensus         3 ~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~   82 (397)
                      +..+.+...++|.+.+.||+|+||+||+|.+..+|+.||||.+....    ....+.+|+.+++.++||||+++++++..
T Consensus        20 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   95 (314)
T 3com_A           20 EDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFK   95 (314)
T ss_dssp             ----------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             chhhhhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEe
Confidence            34556677899999999999999999999999999999999987532    23467899999999999999999999999


Q ss_pred             CCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           83 KGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        83 ~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      .+.+|+||||++| +|.+++......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus        96 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  175 (314)
T 3com_A           96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL  175 (314)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence            9999999999985 888888766677999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ...........+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+.....    ..+     
T Consensus       176 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~-----  245 (314)
T 3com_A          176 TDTMAKRNTVIGTPFWMAPEVIQE-IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP----PTF-----  245 (314)
T ss_dssp             BTTBSCBCCCCSCGGGCCHHHHSS-SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC----CCC-----
T ss_pred             hhhccccCccCCCCCccChhhcCC-CCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC----ccc-----
Confidence            655445556678999999999976 5689999999999999999999999988776655544332210    000     


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                      .....++.++.+||.+||..||.+|||+.++++||||....
T Consensus       246 ----------------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          246 ----------------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             ----------------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             ----------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence                            11123478999999999999999999999999999998643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.2e-50  Score=387.84  Aligned_cols=262  Identities=31%  Similarity=0.525  Sum_probs=221.8

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC------CccchHHHHHHHHHhc-CCCCeeEEEeee
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE------GVNFTALREIKLLKEL-KSPHIIELIDAF   80 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~------~~~~~~~~E~~~l~~l-~hp~iv~l~~~~   80 (397)
                      ..+.++|.+.+.||+|+||.||+|++..+|+.||||++.......      .....+.+|+.+++.+ +||||++++++|
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            346689999999999999999999999999999999997654221      1133567899999999 799999999999


Q ss_pred             ecCCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           81 PHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        81 ~~~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      ...+..|+||||++| +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~  248 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC  248 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence            999999999999985 888887754 359999999999999999999999999999999999999999999999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccC-----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFG-----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                      .+... ......+||+.|+|||++.+     ...++.++|||||||++|+|++|.+||.+.+....+..+........  
T Consensus       249 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~--  325 (365)
T 2y7j_A          249 HLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS--  325 (365)
T ss_dssp             ECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--
T ss_pred             ccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC--
Confidence            77543 33456788999999999863     23588999999999999999999999998877777666655311110  


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                                            ...+..++.++.+||.+||..||++|||++|+++||||+
T Consensus       326 ----------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          326 ----------------------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             ----------------------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             ----------------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence                                  112235588999999999999999999999999999996

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.7e-50  Score=376.99  Aligned_cols=260  Identities=25%  Similarity=0.421  Sum_probs=221.0

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ..+.++|.+.+.||+|+||+||+|++..+|+.||+|++......  ....+.+|+.+++.++||||+++++++.+.+.+|
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (304)
T 2jam_A            5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF--RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYY   82 (304)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEE
Confidence            45789999999999999999999999999999999999854322  2345778999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE---ccCCcEEEeeeccceeeCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI---GSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl---~~~~~~kl~DFG~a~~~~~  163 (397)
                      +||||++ |+|.+.+...+ .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        83 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           83 LVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             EEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             EEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            9999998 58888877654 58999999999999999999999999999999999999   7788999999999976533


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                        .......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+........           
T Consensus       162 --~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-----------  227 (304)
T 2jam_A          162 --GIMSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE-----------  227 (304)
T ss_dssp             --BTTHHHHSCCCBCCTTTBSS-CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCC-----------
T ss_pred             --CccccccCCCCccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-----------
Confidence              23345568999999999976 5689999999999999999999999998887777777665422111           


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                   ...+..+++++.+||.+||..||.+|||++|+++||||...
T Consensus       228 -------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          228 -------------SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             -------------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             -------------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence                         12234568999999999999999999999999999999763

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=8.7e-51  Score=382.93  Aligned_cols=257  Identities=24%  Similarity=0.376  Sum_probs=205.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----   84 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++.... .......+.+|+.+|++++||||++++++|.+..    
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   81 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW   81 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence            46789999999999999999999999999999999997654 2334456789999999999999999999985433    


Q ss_pred             -----------------------------------------------------eEEEEEEcccc-CHHHHHHhcCC--CC
Q 015948           85 -----------------------------------------------------NLHLVFEFMET-DLETVIRNTNI--FL  108 (397)
Q Consensus        85 -----------------------------------------------------~~~lv~e~~~g-~L~~~~~~~~~--~l  108 (397)
                                                                           ++|+|||||+| +|.+++.....  ..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  161 (332)
T 3qd2_B           82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR  161 (332)
T ss_dssp             HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred             hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence                                                                 48999999985 88888876432  25


Q ss_pred             CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC------------CcccccccCce
Q 015948          109 SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD------------RRFTHQVFARW  176 (397)
Q Consensus       109 ~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~------------~~~~~~~~t~~  176 (397)
                      ++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++......            ......+||+.
T Consensus       162 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            666789999999999999999999999999999999999999999999999875542            22344678999


Q ss_pred             eeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCc
Q 015948          177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL  256 (397)
Q Consensus       177 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (397)
                      |+|||++.+ ..++.++|||||||++|+|++|..++..     ....+.......                        .
T Consensus       242 y~aPE~~~~-~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~~~------------------------~  291 (332)
T 3qd2_B          242 YMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNLK------------------------F  291 (332)
T ss_dssp             GSCHHHHHC-CCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHTTC------------------------C
T ss_pred             ccChHHhcC-CCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhccC------------------------C
Confidence            999999987 5689999999999999999998765321     111111111000                        0


Q ss_pred             cccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          257 RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       257 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ...+...++++.+||.+||+.||.+|||++|+++||||++
T Consensus       292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            1111233678899999999999999999999999999976

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-50  Score=384.87  Aligned_cols=260  Identities=26%  Similarity=0.359  Sum_probs=209.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC--CCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~l~~~~~~~~~~~   87 (397)
                      ..++|++.+.||+|+||+||+|.+ .+++.||||++............+.+|+.+|+.++|  +||+++++++.+++.+|
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            467899999999999999999987 468999999998665444444567889999999987  99999999999999999


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      +|||+.+|+|.+++.... .+++..++.++.||+.||.|||++||+||||||+||||+ ++.+||+|||+++....... 
T Consensus        86 lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~  163 (343)
T 3dbq_A           86 MVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  163 (343)
T ss_dssp             EEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred             EEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence            999988899999998754 599999999999999999999999999999999999996 68899999999987644332 


Q ss_pred             -cccccccCceeeChhcccC----------ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCCC
Q 015948          167 -RFTHQVFARWYRAPELLFG----------AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPS  234 (397)
Q Consensus       167 -~~~~~~~t~~y~aPE~l~~----------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~  234 (397)
                       .....+||+.|+|||++.+          ...++.++|||||||++|+|++|.+||.+..+. ..+..+.   ......
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~~~  240 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII---DPNHEI  240 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH---CTTSCC
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh---cCCccc
Confidence             2345678999999999853          246889999999999999999999999875443 2222222   111111


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      .                       .....+.++.+||.+||+.||.+|||+.|+|+||||+...
T Consensus       241 ~-----------------------~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          241 E-----------------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             C-----------------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             C-----------------------CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence            1                       1123368899999999999999999999999999997543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.4e-51  Score=398.56  Aligned_cols=264  Identities=30%  Similarity=0.472  Sum_probs=207.2

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc------CCccchHHHHHHHHHhcCCCCeeEEEeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTALREIKLLKELKSPHIIELIDAF   80 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~------~~~~~~~~~E~~~l~~l~hp~iv~l~~~~   80 (397)
                      ...+.++|.+.+.||+|+||+||+|++..+++.||||++......      ......+.+|+.+|++++||||++++++|
T Consensus       130 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~  209 (419)
T 3i6u_A          130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF  209 (419)
T ss_dssp             CHHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             chhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            456789999999999999999999999999999999999865321      12233577999999999999999999998


Q ss_pred             ecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cEEEeeec
Q 015948           81 PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFG  156 (397)
Q Consensus        81 ~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~kl~DFG  156 (397)
                      .. +.+|+|||||. |+|.+.+.. +..+++..++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||
T Consensus       210 ~~-~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          210 DA-EDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             ES-SEEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             ec-CceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence            54 56899999998 477776654 44699999999999999999999999999999999999997654   59999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                      +++..... ......+||+.|+|||++.+  ...|+.++|||||||++|+|++|.+||.+......+...+....     
T Consensus       288 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~-----  361 (419)
T 3i6u_A          288 HSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK-----  361 (419)
T ss_dssp             TTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC-----
T ss_pred             cceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC-----
Confidence            99876542 33445678999999999853  35688899999999999999999999987654332222222100     


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                        .......+..+++.+.+||.+||+.||.+|||++|+|+||||++
T Consensus       362 ------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          362 ------------------YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             ------------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ------------------CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence                              00112333456899999999999999999999999999999975

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.8e-50  Score=376.20  Aligned_cols=265  Identities=26%  Similarity=0.384  Sum_probs=217.4

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .....++|++.+.||+|+||+||+|++..+++.||+|++....  ......+.+|+.+++.++||||+++++++.+++.+
T Consensus        14 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   91 (302)
T 2j7t_A           14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKL   91 (302)
T ss_dssp             SSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CE
T ss_pred             ccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeE
Confidence            3456899999999999999999999999999999999986542  23345677899999999999999999999999999


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||++| +|..++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        92 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence            999999985 7877777666679999999999999999999999999999999999999999999999999986432222


Q ss_pred             CcccccccCceeeChhccc----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 RRFTHQVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .......+++.|+|||++.    ....++.++|||||||++|+|++|.+||...+....+..+......   .       
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~-------  241 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPP---T-------  241 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---C-------
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCc---c-------
Confidence            2233456888999999984    3356889999999999999999999999988777666555442110   0       


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                     ......++.++.+||.+||..||.+|||++++++||||.+..
T Consensus       242 ---------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          242 ---------------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             ---------------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             ---------------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence                           011123478999999999999999999999999999998644

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.3e-50  Score=377.68  Aligned_cols=264  Identities=25%  Similarity=0.438  Sum_probs=217.9

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc--CCccchHHHHHHHHHhcCCCCeeEEEeee--ecCC
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKELKSPHIIELIDAF--PHKG   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~--~~~~   84 (397)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++......  ......+.+|+.+++.++||||+++++++  .+..
T Consensus         2 ~l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (305)
T 2wtk_C            2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ   81 (305)
T ss_dssp             ---CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred             ccccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence            4678999999999999999999999999999999999764321  23345678999999999999999999998  5566


Q ss_pred             eEEEEEEccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      .+|+||||++++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        82 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           82 KMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             eEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            89999999998888877654 44699999999999999999999999999999999999999999999999999987643


Q ss_pred             C--CCcccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          164 P--DRRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       164 ~--~~~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      .  ........+++.|+|||++.+.. .++.++|||||||++|+|++|..||.+.+..+....+.....           
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~-----------  230 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY-----------  230 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC-----------
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCC-----------
Confidence            2  22334566889999999987532 347799999999999999999999998877666665544210           


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                                       .+...+++.+.+||.+||..||.+|||++|+++||||.....+
T Consensus       231 -----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          231 -----------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPP  273 (305)
T ss_dssp             -----------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC
T ss_pred             -----------------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCC
Confidence                             1123458899999999999999999999999999999875443

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1e-50  Score=383.41  Aligned_cols=282  Identities=27%  Similarity=0.475  Sum_probs=224.7

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEE-CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCC------CeeEEE
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAID-TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP------HIIELI   77 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~-~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp------~iv~l~   77 (397)
                      ..+..+.++|++.+.||+|+||+||+|.+ ..+++.||||++....   .....+.+|+.+++.++|+      +|++++
T Consensus         7 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~   83 (339)
T 1z57_A            7 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---RYCEAARSEIQVLEHLNTTDPNSTFRCVQML   83 (339)
T ss_dssp             STTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred             ecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC---chhHHHHHHHHHHHHhhhcCCCCceeeEeee
Confidence            44667889999999999999999999998 5678999999986432   2234567899999999765      499999


Q ss_pred             eeeecCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc----------
Q 015948           78 DAFPHKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----------  146 (397)
Q Consensus        78 ~~~~~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~----------  146 (397)
                      ++|.+.+.+|+||||++++|.+.+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.          
T Consensus        84 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~  163 (339)
T 1z57_A           84 EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK  163 (339)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred             cccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCc
Confidence            9999999999999999999999988764 35899999999999999999999999999999999999987          


Q ss_pred             ---------CCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc
Q 015948          147 ---------HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD  217 (397)
Q Consensus       147 ---------~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  217 (397)
                               ++.+||+|||+++.....   .....||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.
T Consensus       164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~  239 (339)
T 1z57_A          164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDS  239 (339)
T ss_dssp             --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred             cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence                     668999999999875432   345678999999999976 5689999999999999999999999999988


Q ss_pred             HHHHHHHHHHhCCCCCCC----------------CCCCCCCccccccccccCCCccc---cCCCCCHHHHHHHHHhcCcC
Q 015948          218 IDQLGKIFAAFGTATPSQ----------------WPDLAYLPDYVEYQYVAAPPLRS---LFPSASDDALDLLSKMFTYD  278 (397)
Q Consensus       218 ~~~~~~i~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~li~~~L~~d  278 (397)
                      .+.+..+....+..+...                |......   ..+......++..   .....++++.+||.+||+.|
T Consensus       240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  316 (339)
T 1z57_A          240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSA---GRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD  316 (339)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHH---HHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccc---cchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcC
Confidence            888877777665433211                1110000   0000000000000   11123578999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCC
Q 015948          279 PKARITAQQALEHRYFSS  296 (397)
Q Consensus       279 P~~R~t~~e~l~hp~~~~  296 (397)
                      |.+|||++|+++||||+.
T Consensus       317 P~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          317 PAKRITLREALKHPFFDL  334 (339)
T ss_dssp             TTTSCCHHHHTTSGGGGG
T ss_pred             cccccCHHHHhcCHHHHH
Confidence            999999999999999975

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=8.1e-51  Score=381.83  Aligned_cols=280  Identities=21%  Similarity=0.280  Sum_probs=216.9

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC--e
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--N   85 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~   85 (397)
                      ..+.++|++.+.||+|+||+||+|++..+|+.||||++....... ....+.+|+.+|+.++||||+++++++....  .
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   83 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH   83 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS-CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCCcceEEEEeecCCCce
Confidence            456789999999999999999999999999999999987543322 2345678999999999999999999987655  8


Q ss_pred             EEEEEEccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE----ccCCcEEEeeeccc
Q 015948           86 LHLVFEFME-TDLETVIRNTNI--FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLA  158 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl----~~~~~~kl~DFG~a  158 (397)
                      +|+||||++ |+|.+++.....  .+++..++.++.||+.||.|||++||+||||||+||||    +.++.+||+|||++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence            899999998 688888876432  38999999999999999999999999999999999999    77788999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccC-------ccCCCCcchHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHHH
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFG-------AKQYGAGVDVWAAGCIFAELLNRRPFLQGSS----DIDQLGKIFAA  227 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~-------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~~~~i~~~  227 (397)
                      +...... ......||+.|+|||++..       ...++.++|||||||++|||++|..||....    ..+.+..+...
T Consensus       164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (319)
T 4euu_A          164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (319)
T ss_dssp             EECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred             eecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence            8875433 3445678999999999852       2568999999999999999999999997543    34455555443


Q ss_pred             hCCCCCCCCCCCCCCccccccccc-cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYV-AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                      ..   +..+......... .+.+. ..+....+...++..+.+||.+||+.||++|||++|+|+||-
T Consensus       243 ~p---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          243 KP---SGAISGVQKAENG-PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             CC---TTCCEEEECSTTC-CEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             CC---cccchhhhcccCC-ccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            22   2222111111000 00000 111111222344678899999999999999999999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=4e-50  Score=373.12  Aligned_cols=266  Identities=27%  Similarity=0.453  Sum_probs=222.9

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-------CccchHHHHHHHHHhcC-CCCeeEEEe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-------GVNFTALREIKLLKELK-SPHIIELID   78 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-------~~~~~~~~E~~~l~~l~-hp~iv~l~~   78 (397)
                      ...+.++|++.+.||+|+||.||+|++..+|+.||||++.......       .....+.+|+.+++++. ||||+++++
T Consensus        12 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~   91 (298)
T 1phk_A           12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD   91 (298)
T ss_dssp             ---CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             CcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence            3457899999999999999999999999999999999997654211       12335678999999995 999999999


Q ss_pred             eeecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948           79 AFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        79 ~~~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                      ++..++..|+||||++ |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  170 (298)
T 1phk_A           92 TYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF  170 (298)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             eeccCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccc
Confidence            9999999999999998 5888888764 4599999999999999999999999999999999999999999999999999


Q ss_pred             ceeeCCCCCcccccccCceeeChhccc-----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC
Q 015948          158 ARIFGSPDRRFTHQVFARWYRAPELLF-----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT  232 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~aPE~l~-----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  232 (397)
                      +...... .......+++.|+|||++.     ....++.++|||||||++|+|++|..||.+.+.......+........
T Consensus       171 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  249 (298)
T 1phk_A          171 SCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG  249 (298)
T ss_dssp             CEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             hhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccC
Confidence            9876543 3344567899999999985     234578999999999999999999999998887776666655321111


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      .                        ..++.++..+.+||.+||..||.+|||++|+++||||.+..
T Consensus       250 ~------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          250 S------------------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             T------------------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             c------------------------ccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            1                        11124588999999999999999999999999999998654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.8e-50  Score=371.41  Aligned_cols=262  Identities=27%  Similarity=0.452  Sum_probs=219.3

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC----ccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----VNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||+|++........    ....+.+|+.+++.++||||+++++++.+.+
T Consensus         2 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T 3bhy_A            2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT   81 (283)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             chhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC
Confidence            367899999999999999999999999999999999987543222    2345788999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC----cEEEeeeccce
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLAR  159 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~----~~kl~DFG~a~  159 (397)
                      ..|+||||++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++    .+||+|||++.
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           82 DVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             eEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            9999999997 6888887654 3589999999999999999999999999999999999998877    89999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      ...... ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+......         
T Consensus       161 ~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------  229 (283)
T 3bhy_A          161 KIEAGN-EFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD---------  229 (283)
T ss_dssp             ECC---------CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC---------
T ss_pred             eccCCC-cccccCCCcCccCcceecC-CCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC---------
Confidence            764432 3345678899999999876 56899999999999999999999999988877666655432100         


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                     .....++.++..+.+||.+||..||.+|||+.|+++||||+..
T Consensus       230 ---------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          230 ---------------FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             ---------------CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             ---------------CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence                           0112334568999999999999999999999999999999753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.8e-50  Score=369.94  Aligned_cols=261  Identities=25%  Similarity=0.384  Sum_probs=216.6

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .+.++|++.+.||+|+||+||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++.+++..|+
T Consensus         4 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (276)
T 2yex_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (276)
T ss_dssp             HHHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ceecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence            467899999999999999999999999999999999875432 2233567789999999999999999999999999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--  165 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--  165 (397)
                      ||||++| +|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......  
T Consensus        83 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           83 FLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             EEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             EEEecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence            9999985 77776654 4459999999999999999999999999999999999999999999999999998754322  


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID-QLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      .......+++.|+|||++.+...++.++|||||||++|+|++|..||.+.+... .+..+... . .             
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~-~-------------  226 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-K-T-------------  226 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT-C-T-------------
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc-c-c-------------
Confidence            223456788999999999775555789999999999999999999998765432 22222111 0 0             


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 .......+++.+.+||.+||+.||.+|||++|+++||||+..
T Consensus       227 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          227 -----------YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             -----------TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             -----------ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence                       001123458999999999999999999999999999999763

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=7.3e-51  Score=386.98  Aligned_cols=287  Identities=26%  Similarity=0.410  Sum_probs=226.2

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCC-cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC------eeEEE
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH------IIELI   77 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~------iv~l~   77 (397)
                      .++..+.++|++.+.||+|+||+||+|++..++ ..||+|++....   .....+.+|+.+++.++|++      ++.++
T Consensus        12 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~   88 (355)
T 2eu9_A           12 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG---KYREAARLEINVLKKIKEKDKENKFLCVLMS   88 (355)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred             ccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc---cchhHHHHHHHHHHHHhhcCCCCceeEEEee
Confidence            356678899999999999999999999998877 689999986432   22345678999999997655      99999


Q ss_pred             eeeecCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE------------
Q 015948           78 DAFPHKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI------------  144 (397)
Q Consensus        78 ~~~~~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl------------  144 (397)
                      +++...+++|+||||++|++++.+.... ..+++..++.++.||+.||+|||++||+||||||+||||            
T Consensus        89 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~  168 (355)
T 2eu9_A           89 DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH  168 (355)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred             eeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccc
Confidence            9999999999999999999999887764 469999999999999999999999999999999999999            


Q ss_pred             -------ccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc
Q 015948          145 -------GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD  217 (397)
Q Consensus       145 -------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  217 (397)
                             +.++.+||+|||+++.....   ....+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.
T Consensus       169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~  244 (355)
T 2eu9_A          169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHEN  244 (355)
T ss_dssp             -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence                   56789999999999875432   345678999999999976 5689999999999999999999999999988


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCC-------------ccccccccccCCCcccc---CCCCCHHHHHHHHHhcCcCCCC
Q 015948          218 IDQLGKIFAAFGTATPSQWPDLAYL-------------PDYVEYQYVAAPPLRSL---FPSASDDALDLLSKMFTYDPKA  281 (397)
Q Consensus       218 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~  281 (397)
                      .+.+..+....+..+...+......             .....+......+....   ....+.++.+||.+||+.||++
T Consensus       245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  324 (355)
T 2eu9_A          245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ  324 (355)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence            8888887777664332111000000             00000000000011111   1112468899999999999999


Q ss_pred             CCCHHHHhcCCCCCCCC
Q 015948          282 RITAQQALEHRYFSSAP  298 (397)
Q Consensus       282 R~t~~e~l~hp~~~~~~  298 (397)
                      |||++|+|+||||.+..
T Consensus       325 Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          325 RITLAEALLHPFFAGLT  341 (355)
T ss_dssp             SCCHHHHTTSGGGGGCC
T ss_pred             CcCHHHHhcChhhcCCC
Confidence            99999999999998753

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=2.6e-50  Score=378.89  Aligned_cols=265  Identities=31%  Similarity=0.484  Sum_probs=213.3

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc------cCCccchHHHHHHHHHhcCCCCeeEEEeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ------KEGVNFTALREIKLLKELKSPHIIELIDAF   80 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~------~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~   80 (397)
                      ...+.++|.+.+.||+|+||.||+|++..+++.||||++.....      .......+.+|+.+|+.++||||+++++++
T Consensus         5 ~~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   84 (322)
T 2ycf_A            5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF   84 (322)
T ss_dssp             CHHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence            56789999999999999999999999999999999999976432      112234577899999999999999999999


Q ss_pred             ecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc---EEEeeec
Q 015948           81 PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFG  156 (397)
Q Consensus        81 ~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~---~kl~DFG  156 (397)
                      ..+. +|+||||+. |+|.+.+.. +..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||
T Consensus        85 ~~~~-~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg  162 (322)
T 2ycf_A           85 DAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  162 (322)
T ss_dssp             ESSS-EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred             cCCc-eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence            7665 899999998 478777765 446999999999999999999999999999999999999987665   9999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhccc--CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLF--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS  234 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~--~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  234 (397)
                      +++..... .......||+.|+|||++.  +...++.++|||||||++|+|++|.+||........+...+....     
T Consensus       163 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-----  236 (322)
T 2ycf_A          163 HSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK-----  236 (322)
T ss_dssp             TCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC-----
T ss_pred             cceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc-----
Confidence            99876432 2234456889999999974  345689999999999999999999999987654322222222100     


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                        .......+..++.++.+||.+||..||.+|||++++++||||...
T Consensus       237 ------------------~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          237 ------------------YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             ------------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             ------------------cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence                              000112234568999999999999999999999999999999753

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.6e-51  Score=385.41  Aligned_cols=264  Identities=23%  Similarity=0.361  Sum_probs=214.6

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCC-
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKG-   84 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-   84 (397)
                      ...+.++|++.+.||+|+||+||+|++..+++.||||++....... .....+.+|+.+++.++||||+++++++.... 
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   86 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP   86 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC
Confidence            5567899999999999999999999999999999999997654322 22345678999999999999999999986644 


Q ss_pred             ---eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           85 ---NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        85 ---~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                         .+|+||||++ |+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        87 ~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A           87 AGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             TEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             CCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence               4599999997 58888877644 599999999999999999999999999999999999999999999999999987


Q ss_pred             eCCCC---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948          161 FGSPD---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP  237 (397)
Q Consensus       161 ~~~~~---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  237 (397)
                      .....   ......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.....        
T Consensus       166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--------  236 (311)
T 3ork_A          166 IADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP--------  236 (311)
T ss_dssp             ----------------CCTTCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--------
T ss_pred             ccccccccccccccCcCcccCCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC--------
Confidence            64432   22334568999999999977 5689999999999999999999999998887776655544211        


Q ss_pred             CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                      .+.......++.++.+||.+||+.||.+||++.+++.|+|+..
T Consensus       237 ----------------~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          237 ----------------IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             ----------------CCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ----------------CCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence                            1112233457899999999999999999999999999999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=5.4e-50  Score=371.01  Aligned_cols=256  Identities=24%  Similarity=0.348  Sum_probs=213.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec----CCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH----KGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~~~   86 (397)
                      .+.|.+.+.||+|+||+||+|.+..++..||+|++............+.+|+.+++.++||||++++++|..    ...+
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence            456899999999999999999999999999999998665544445567899999999999999999998865    4679


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEc-cCCcEEEeeeccceeeC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIG-SHGQLKLADFGLARIFG  162 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~-~~~~~kl~DFG~a~~~~  162 (397)
                      |+||||++ |+|.+++... ..+++..++.++.||+.||.|||++|  |+||||||+|||++ .++.+||+|||++....
T Consensus       105 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            99999997 5888888764 34899999999999999999999999  99999999999998 78999999999997653


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ..  ......|++.|+|||++.+  .++.++|||||||++|+|++|..||.+...............  .          
T Consensus       184 ~~--~~~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--~----------  247 (290)
T 1t4h_A          184 AS--FAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV--K----------  247 (290)
T ss_dssp             TT--SBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC--C----------
T ss_pred             cc--ccccccCCcCcCCHHHHhc--cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC--C----------
Confidence            32  3345678999999999864  489999999999999999999999988766555443322100  0          


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                   ........++++.+||.+||+.||.+|||++|+++||||++
T Consensus       248 -------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          248 -------------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -------------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -------------ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence                         01122344789999999999999999999999999999975

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-50  Score=386.87  Aligned_cols=264  Identities=25%  Similarity=0.406  Sum_probs=212.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCc--cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .++|.+.+.||+|+||+||+|++.   .+|+.||||++.....  .......+.+|+.+|+.+ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            479999999999999999999984   5889999999875432  122233455799999999 6999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      .+|+|||||+ |+|.+++.... .+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+..
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~  211 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  211 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeeccc
Confidence            9999999998 58888887654 599999999999999999999999999999999999999999999999999987643


Q ss_pred             CC-CcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          164 PD-RRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       164 ~~-~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .. ......+||+.|+|||++.+. ..++.++|||||||++|+|++|..||...........+........         
T Consensus       212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---------  282 (355)
T 1vzo_A          212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---------  282 (355)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC---------
T ss_pred             CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC---------
Confidence            22 233456789999999999753 4578999999999999999999999976433222222221110000         


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                                     ..+...++..+.+||.+||..||.+||     +++|+++||||....+
T Consensus       283 ---------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~  330 (355)
T 1vzo_A          283 ---------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  330 (355)
T ss_dssp             ---------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             ---------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCCh
Confidence                           012234589999999999999999999     9999999999987654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.8e-50  Score=370.61  Aligned_cols=259  Identities=28%  Similarity=0.440  Sum_probs=219.1

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee--ecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF--PHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~--~~~~~~~   87 (397)
                      ..++|++.+.||+|+||+||+|++..+|+.||+|++............+.+|+.++++++||||+++++++  ...+.+|
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            36899999999999999999999999999999999987654444455678999999999999999999987  4577899


Q ss_pred             EEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCC-----ccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           88 LVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKW-----VLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~-----ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                      +||||++ |+|.+++...   ...+++..++.++.||+.||.|||++|     |+||||||+|||++.++.+||+|||++
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~  163 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  163 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence            9999998 5888888653   345899999999999999999999999     999999999999999999999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      +.............+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+....+......        
T Consensus       164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~--------  234 (279)
T 2w5a_A          164 RILNHDTSFAKTFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR--------  234 (279)
T ss_dssp             HHC---CHHHHHHHSCCTTCCHHHHHC-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--------
T ss_pred             eeeccccccccccCCCccccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccc--------
Confidence            876554433445678889999999977 56899999999999999999999999988776666665543110        


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                         .+...++.++.+||.+||+.||.+|||++|+++|+|+..
T Consensus       235 -------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          235 -------------------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             -------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             -------------------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence                               112345899999999999999999999999999999975

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.3e-50  Score=374.53  Aligned_cols=265  Identities=24%  Similarity=0.337  Sum_probs=214.6

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecC
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHK   83 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~   83 (397)
                      .++..+.++|++.+.||+|+||+||+|++..++..||+|++....... .....+.+|+.+++.++||||+++++++.++
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~   83 (294)
T 4eqm_A            4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED   83 (294)
T ss_dssp             CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS
T ss_pred             chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC
Confidence            456778999999999999999999999999999999999987654322 2334577899999999999999999999999


Q ss_pred             CeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 ~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      +.+|+||||++| +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A           84 DCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             CeEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            999999999985 8888877654 59999999999999999999999999999999999999999999999999998764


Q ss_pred             CCC-CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          163 SPD-RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       163 ~~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+...........   ..         
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~---~~---------  229 (294)
T 4eqm_A          163 ETSLTQTNHVLGTVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD---SV---------  229 (294)
T ss_dssp             ------------CCSSCCHHHHHT-CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSS---CC---------
T ss_pred             cccccccCccccCccccCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhc---cC---------
Confidence            433 22344568999999999987 56899999999999999999999999988766654443321   00         


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                 ........+.+++.+.++|.+||..||.+||+..+.+.+.|.
T Consensus       230 -----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          230 -----------PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS  271 (294)
T ss_dssp             -----------CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred             -----------CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence                       000123345678999999999999999999966666665554

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.7e-49  Score=370.06  Aligned_cols=259  Identities=25%  Similarity=0.403  Sum_probs=222.8

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .....++|.+.+.||+|+||+||+|++..+++.||||++...... .....+.+|+.+++.++||||+++++++.+.+.+
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   95 (303)
T 3a7i_A           17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL   95 (303)
T ss_dssp             EECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             CCChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence            344578899999999999999999999999999999999765432 2345678999999999999999999999999999


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||++| +|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        96 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             EEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred             EEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence            999999985 77777754  358999999999999999999999999999999999999999999999999998876555


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      .......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...........+.....                
T Consensus       174 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------  236 (303)
T 3a7i_A          174 IKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP----------------  236 (303)
T ss_dssp             CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC----------------
T ss_pred             cccCccCCCcCccCHHHHhc-CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCC----------------
Confidence            45556778999999999976 5688999999999999999999999988776665554433210                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                 ..+...++..+.+||.+||..||.+|||+.++++||||..
T Consensus       237 -----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          237 -----------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             -----------CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred             -----------CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence                       0122345899999999999999999999999999999964

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=9.6e-50  Score=368.87  Aligned_cols=263  Identities=33%  Similarity=0.529  Sum_probs=224.2

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ...+.++|++.+.||+|+||+||+|++..+++.||||++............+.+|+.++++++||||+++++++.+.+.+
T Consensus        17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   96 (287)
T 2wei_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF   96 (287)
T ss_dssp             THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence            55678999999999999999999999999999999999987655555556788999999999999999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeeccceeeC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFG  162 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~a~~~~  162 (397)
                      |+||||+. ++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+||+++.+   +.+||+|||++....
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           97 YIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            99999997 58888776654 58999999999999999999999999999999999999764   469999999998764


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      ... ......+++.|+|||++.+  .++.++|||||||++|+|++|.+||.+.+..+....+........          
T Consensus       176 ~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------  242 (287)
T 2wei_A          176 QNT-KMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD----------  242 (287)
T ss_dssp             CCS-SCSCHHHHHTTCCHHHHTT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----------
T ss_pred             CCC-ccccccCcccccChHHhcC--CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----------
Confidence            432 3344567888999999876  489999999999999999999999998887777666654311100          


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                    ...+..+++++.+||.+||..||.+|||+.|+++||||...
T Consensus       243 --------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          243 --------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             --------------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             --------------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence                          11223568999999999999999999999999999999753

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.4e-51  Score=395.98  Aligned_cols=249  Identities=17%  Similarity=0.209  Sum_probs=200.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHH---HHHHhcCCCCeeEEE-------ee
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREI---KLLKELKSPHIIELI-------DA   79 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~---~~l~~l~hp~iv~l~-------~~   79 (397)
                      .++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+   .+|+.++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            5789999999999999999999999999999999986532 233345677899   555566899999998       66


Q ss_pred             eecCC-----------------eEEEEEEccccCHHHHHHhcCCCCC-------HHHHHHHHHHHHHHHHHhHhCCcccc
Q 015948           80 FPHKG-----------------NLHLVFEFMETDLETVIRNTNIFLS-------PADIKSYMQMTLKGLAFCHKKWVLHR  135 (397)
Q Consensus        80 ~~~~~-----------------~~~lv~e~~~g~L~~~~~~~~~~l~-------~~~~~~~~~qil~aL~~lH~~~ivHr  135 (397)
                      +++.+                 ..|+||||++|+|.+++..... ++       +..+..++.||+.||+|||++||+||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS-HSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHH-TTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccc-cccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            65543                 3899999999999999886432 44       47888899999999999999999999


Q ss_pred             CCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCc----------cCCCCcchHHHHHHHHHHH
Q 015948          136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA----------KQYGAGVDVWAAGCIFAEL  205 (397)
Q Consensus       136 Dlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~----------~~~~~~~DiwSlG~il~el  205 (397)
                      ||||+||||+.+|.+||+|||+|+..+.   .....+| +.|+|||++.+.          ..|+.++|||||||++|||
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el  306 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI  306 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence            9999999999999999999999986432   3445566 889999999764          2689999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH
Q 015948          206 LNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA  285 (397)
Q Consensus       206 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~  285 (397)
                      ++|++||.+.+.......+                                ....+.+++++.+||.+||+.||.+|||+
T Consensus       307 ltg~~Pf~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~  354 (377)
T 3byv_A          307 WCADLPITKDAALGGSEWI--------------------------------FRSCKNIPQPVRALLEGFLRYPKEDRLLP  354 (377)
T ss_dssp             HHSSCCC------CCSGGG--------------------------------GSSCCCCCHHHHHHHHHHTCSSGGGCCCH
T ss_pred             HHCCCCCcccccccchhhh--------------------------------hhhccCCCHHHHHHHHHHcCCCchhCCCH
Confidence            9999999765432211110                                11124668999999999999999999999


Q ss_pred             HHHhcCCCCCC
Q 015948          286 QQALEHRYFSS  296 (397)
Q Consensus       286 ~e~l~hp~~~~  296 (397)
                      .|+++||||+.
T Consensus       355 ~e~l~hp~f~~  365 (377)
T 3byv_A          355 LQAMETPEYEQ  365 (377)
T ss_dssp             HHHHTSHHHHH
T ss_pred             HHHhhChHHHH
Confidence            99999999964

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=4.6e-50  Score=368.62  Aligned_cols=260  Identities=28%  Similarity=0.430  Sum_probs=213.2

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      +....++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.++||||+++++++.+.+.
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   85 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD   85 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe
Confidence            44567899999999999999999999999999999999976432 22334467789999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .|+||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  164 (276)
T 2h6d_A           86 FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  164 (276)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred             EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence            999999997 58888887654 4899999999999999999999999999999999999999999999999999876443


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      . ......+++.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+.....               
T Consensus       165 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------  228 (276)
T 2h6d_A          165 E-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF---------------  228 (276)
T ss_dssp             -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC---------------
T ss_pred             c-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc---------------
Confidence            2 234557888999999998754457899999999999999999999988776666655543210               


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                   .....++..+.+||.+||+.||.+|||+.++++||||+.
T Consensus       229 -------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~  267 (276)
T 2h6d_A          229 -------------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ  267 (276)
T ss_dssp             -------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHT
T ss_pred             -------------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhcc
Confidence                         011234789999999999999999999999999999975

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.1e-49  Score=372.48  Aligned_cols=258  Identities=21%  Similarity=0.279  Sum_probs=206.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|.+.+.||+|+||+||+|++  +|..||||++............+.+|+.+|++++||||+++++++.+.+.+|+|
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            468999999999999999999976  578999999876554444445678999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           90 FEFME-TDLETVIRNTNI--FLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      |||+. |+|.+++.+...  .+++..++.++.||+.||+|||++|  |+||||||+|||++.++.+||+|||+++.....
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  192 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST  192 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence            99998 588888876432  3899999999999999999999999  999999999999999999999999999876555


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+......              
T Consensus       193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~--------------  257 (309)
T 3p86_A          193 FLSSKSAAGTPEWMAPEVLRD-EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR--------------  257 (309)
T ss_dssp             ---------CCTTSCHHHHTT-CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCC--------------
T ss_pred             ccccccCCCCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--------------
Confidence            444556778999999999976 56899999999999999999999999988777666554332110              


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc--CCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE--HRYFSS  296 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~--hp~~~~  296 (397)
                                  ......+++++.+||.+||+.||.+|||++++++  ++++..
T Consensus       258 ------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          258 ------------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             ------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence                        1122356899999999999999999999999987  455544

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-49  Score=373.33  Aligned_cols=259  Identities=27%  Similarity=0.371  Sum_probs=211.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec------
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH------   82 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~------   82 (397)
                      ..++|++.+.||+|+||+||+|++..+|+.||||++....   .....+.+|+.+++.+ +||||+++++++..      
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~   98 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   98 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence            5789999999999999999999999999999999987543   2334678999999999 79999999999976      


Q ss_pred             CCeEEEEEEcccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           83 KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        83 ~~~~~lv~e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      .+.+|+||||++| +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  178 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  178 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred             cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence            5689999999985 888888764 24699999999999999999999999999999999999999999999999999987


Q ss_pred             eCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ............+++.|+|||++.+    ...++.++|||||||++|+|++|.+||.+.+....+..+.....   +   
T Consensus       179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~---  252 (326)
T 2x7f_A          179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA---P---  252 (326)
T ss_dssp             ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---C---
T ss_pred             cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc---c---
Confidence            6554444455678999999999863    34688999999999999999999999988877666555433210   0   


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                          ......++..+.+||.+||..||.+|||++++++||||.+.
T Consensus       253 --------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          253 --------------------RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             --------------------CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             --------------------cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence                                01123458999999999999999999999999999999764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.6e-50  Score=386.42  Aligned_cols=263  Identities=17%  Similarity=0.156  Sum_probs=194.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhc--CCCCeeEEE-------eeee
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL--KSPHIIELI-------DAFP   81 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l--~hp~iv~l~-------~~~~   81 (397)
                      .+|.+.+.||+|+||+||+|++..+|+.||||++....... .....+.+|+.+++.|  +||||++++       +.+.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            45999999999999999999999999999999998765322 2333456675544444  699988865       3443


Q ss_pred             cC-----------------CeEEEEEEccccCHHHHHHhcCCCCCHHHH------HHHHHHHHHHHHHhHhCCccccCCC
Q 015948           82 HK-----------------GNLHLVFEFMETDLETVIRNTNIFLSPADI------KSYMQMTLKGLAFCHKKWVLHRDMK  138 (397)
Q Consensus        82 ~~-----------------~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~------~~~~~qil~aL~~lH~~~ivHrDlk  138 (397)
                      ..                 ..+|+|||||+|+|.+++...+..++....      ..++.||+.||+|||++||+|||||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDik  221 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFT  221 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCC
Confidence            22                 348999999999999999876544555555      6777999999999999999999999


Q ss_pred             CCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccC-ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc
Q 015948          139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD  217 (397)
Q Consensus       139 p~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  217 (397)
                      |+||||+.+|.+||+|||+|+..+..   .....+|+.|+|||++.+ ...++.++|||||||++|+|++|++||.+...
T Consensus       222 p~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~  298 (371)
T 3q60_A          222 PDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP  298 (371)
T ss_dssp             GGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred             HHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence            99999999999999999999876432   224556688999999964 24689999999999999999999999987642


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          218 IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       218 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ..             ...+....      ..............+.+++.+.+||.+||+.||++|||+.|+|+||||++
T Consensus       299 ~~-------------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          299 GI-------------KGSWKRPS------LRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             TC-------------TTCCCBCC------TTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             cc-------------ccchhhhh------hhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            10             00010000      00000011111223467999999999999999999999999999999975

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.3e-50  Score=375.30  Aligned_cols=270  Identities=25%  Similarity=0.388  Sum_probs=198.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|.+.+.||+|+||+||+|++..+++.||||++...... .....+.+|+.+++.++||||+++++++...+..|+|
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ-TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc-hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            468999999999999999999999989999999998654322 2234567899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           90 FEFME-TDLETVIRN-------TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~-------~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      |||++ |+|.+++..       ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            99997 588887764       2455999999999999999999999999999999999999999999999999999765


Q ss_pred             CCCC-----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          162 GSPD-----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       162 ~~~~-----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ....     .......+++.|+|||++.+...++.++|||||||++|+|++|..||.+..................... 
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-  250 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG-  250 (303)
T ss_dssp             C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC--
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccc-
Confidence            4322     1223456888999999987655689999999999999999999999988776655443332111000000 


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                       .........++.++.+||.+||+.||.+|||+.++++||||....
T Consensus       251 -----------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          251 -----------------VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             ---------------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             -----------------cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence                             001123346689999999999999999999999999999998643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.7e-49  Score=369.07  Aligned_cols=260  Identities=27%  Similarity=0.425  Sum_probs=205.5

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-----
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-----   82 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----   82 (397)
                      ..+.++|++.+.||+|+||+||+|++..+|+.||||++...   ......+.+|+.+++.++||||++++++|.+     
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   78 (303)
T 1zy4_A            2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV   78 (303)
T ss_dssp             BHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred             CcccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence            35688999999999999999999999999999999998642   2223457789999999999999999998754     


Q ss_pred             --------CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEe
Q 015948           83 --------KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLA  153 (397)
Q Consensus        83 --------~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~  153 (397)
                              .+.+|+||||++ |+|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             C------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             hhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEe
Confidence                    457899999998 59999998777678999999999999999999999999999999999999999999999


Q ss_pred             eeccceeeCCC--------------CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 015948          154 DFGLARIFGSP--------------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID  219 (397)
Q Consensus       154 DFG~a~~~~~~--------------~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  219 (397)
                      |||++......              ........+++.|+|||++.+...++.++|||||||++|+|++  +++.+.+...
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--p~~~~~~~~~  236 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVN  236 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS--CCSSHHHHHH
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh--ccCCchhHHH
Confidence            99999865422              1223456688899999999875578999999999999999998  3222222223


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ....+... ....+                       ..+....+..+.+||.+||+.||.+|||++++++||||..
T Consensus       237 ~~~~~~~~-~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          237 ILKKLRSV-SIEFP-----------------------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHHHHHST-TCCCC-----------------------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             HHHhcccc-ccccC-----------------------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            33322211 10000                       1122345788999999999999999999999999999975

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=7e-50  Score=383.23  Aligned_cols=282  Identities=28%  Similarity=0.495  Sum_probs=216.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-----------CCCeeEEEe
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-----------SPHIIELID   78 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-----------hp~iv~l~~   78 (397)
                      ..++|++.+.||+|+||+||+|++..+++.||||++....   .....+.+|+.+++.++           |+||+++++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~   93 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   93 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc---cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence            3579999999999999999999999999999999986432   12345678999999886           899999999


Q ss_pred             eeecCC----eEEEEEEccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEcc------
Q 015948           79 AFPHKG----NLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGS------  146 (397)
Q Consensus        79 ~~~~~~----~~~lv~e~~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~------  146 (397)
                      ++...+    .+++||||++++|.+++... ...+++..++.++.||+.||.|||++ ||+||||||+||||+.      
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~  173 (373)
T 1q8y_A           94 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN  173 (373)
T ss_dssp             EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred             HhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcC
Confidence            997654    89999999988999998874 34599999999999999999999998 9999999999999954      


Q ss_pred             CCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC------cHHH
Q 015948          147 HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS------DIDQ  220 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~  220 (397)
                      .+.+||+|||+++....   ......+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+      +.+.
T Consensus       174 ~~~~kl~Dfg~a~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  249 (373)
T 1q8y_A          174 LIQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  249 (373)
T ss_dssp             EEEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             cceEEEcccccccccCC---CCCCCCCCccccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence            34799999999987643   2345678999999999987 568999999999999999999999998764      4566


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCcccc----ccccc---cCCCc-------cccCCCCCHHHHHHHHHhcCcCCCCCCCHH
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYV----EYQYV---AAPPL-------RSLFPSASDDALDLLSKMFTYDPKARITAQ  286 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~-------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~  286 (397)
                      +..+...++..+...+........+.    .....   ...+.       ..+...++.++.+||.+||+.||.+|||++
T Consensus       250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  329 (373)
T 1q8y_A          250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  329 (373)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence            77777776654321110000000000    00000   00000       011123467899999999999999999999


Q ss_pred             HHhcCCCCCCCC
Q 015948          287 QALEHRYFSSAP  298 (397)
Q Consensus       287 e~l~hp~~~~~~  298 (397)
                      |+|+||||++..
T Consensus       330 ell~hp~f~~~~  341 (373)
T 1q8y_A          330 GLVNHPWLKDTL  341 (373)
T ss_dssp             HHHTCGGGTTCT
T ss_pred             HHhhChhhhccc
Confidence            999999998753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=3.2e-50  Score=384.11  Aligned_cols=286  Identities=25%  Similarity=0.398  Sum_probs=217.4

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .....++|++.+.||+|+||+||+|++..++..||+|++..... ......+.+|+.+++.++||||+++++++.+++.+
T Consensus        28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  106 (360)
T 3eqc_A           28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI  106 (360)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEE
T ss_pred             cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC-HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEE
Confidence            44457899999999999999999999999999999999976532 22344677999999999999999999999999999


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      |+||||++| +|.+++.... .+++..+..++.||+.||.|||++ ||+||||||+||||+.++.+||+|||++......
T Consensus       107 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  185 (360)
T 3eqc_A          107 SICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  185 (360)
T ss_dssp             EEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence            999999985 8888887654 489999999999999999999996 9999999999999999999999999998765322


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC---
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY---  241 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---  241 (397)
                        ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+..+....+............+....   
T Consensus       186 --~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (360)
T 3eqc_A          186 --MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR  262 (360)
T ss_dssp             --C----CCCCTTCCHHHHTT-CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred             --cccCCCCCCCeECHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence              2334578899999999976 5689999999999999999999999988765543322211100000000000000   


Q ss_pred             -Cc-------------cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          242 -LP-------------DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       242 -~~-------------~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                       ..             ..... .............++.++.+||.+||+.||.+|||++|+|+||||+...
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          263 PLNKFGMDSRPPMAIFELLDY-IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             -----------CCCHHHHHHH-HHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cccccccCCCCcccchhhhhH-HhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence             00             00000 0000111111234689999999999999999999999999999997643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.6e-49  Score=371.69  Aligned_cols=253  Identities=22%  Similarity=0.303  Sum_probs=211.9

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ...++|.+.+.||+|+||+||+|++..++.   .||||++..... ......+.+|+.+|+.++||||+++++++.+++.
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  124 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL  124 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence            347899999999999999999999986665   499999875432 2233467889999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|+||||++ |+|.+++......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.....
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred             cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence            999999997 5898988877777999999999999999999999999999999999999999999999999999876543


Q ss_pred             CC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          165 DR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       165 ~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      ..   ......+|..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+.......         
T Consensus       205 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------  274 (325)
T 3kul_A          205 PDAAYTTTGGKIPIRWTAPEAIAF-RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP---------  274 (325)
T ss_dssp             --CCEECC---CCGGGSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---------
T ss_pred             ccceeeccCCCCcccccCHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCC---------
Confidence            22   2223345677999999976 568999999999999999998 999999888877776665431111         


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                        ....+++++.+||.+||..||.+|||+.++++
T Consensus       275 ------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          275 ------------------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             ------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                              12345899999999999999999999999886

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.6e-48  Score=361.63  Aligned_cols=257  Identities=27%  Similarity=0.433  Sum_probs=207.8

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM   93 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~   93 (397)
                      |.....||+|+||+||+|++..++..||||.+....  ......+.+|+.+++.++||||+++++++.+.+.+|+||||+
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            333449999999999999999999999999987543  233456778999999999999999999999999999999999


Q ss_pred             c-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCCCCCccc
Q 015948           94 E-TDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        94 ~-g~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      + |+|.+++....  ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...........
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~  181 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE  181 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence            7 68888887653  24678999999999999999999999999999999999987 89999999999988755444445


Q ss_pred             ccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          170 HQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...|++.|+|||++.+. ..++.++|||||||++|+|++|..||...................                 
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------  244 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-----------------  244 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCC-----------------
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccc-----------------
Confidence            56789999999998653 247899999999999999999999997655443221111111100                 


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                              ..+...++.++.+||.+||+.||++|||++++++||||...
T Consensus       245 --------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          245 --------PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             --------CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred             --------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhc
Confidence                    11223568999999999999999999999999999999754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=4.9e-49  Score=377.27  Aligned_cols=253  Identities=24%  Similarity=0.361  Sum_probs=210.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEEC-------CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeee
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDT-------KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP   81 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~   81 (397)
                      ..++|++.+.||+|+||+||+|++.       .++..||||++..... ......+.+|+.+|+.+ +||||++++++|.
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  157 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACT  157 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-HHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence            3689999999999999999999874       3456799999875422 22334578999999999 8999999999999


Q ss_pred             cCCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc
Q 015948           82 HKGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG  145 (397)
Q Consensus        82 ~~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~  145 (397)
                      +.+.+|+||||+. |+|.+++....               ..+++..+..++.||+.||.|||++||+||||||+||||+
T Consensus       158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~  237 (370)
T 2psq_A          158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT  237 (370)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEEC
Confidence            9999999999998 58998887653               2488999999999999999999999999999999999999


Q ss_pred             cCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 015948          146 SHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLG  222 (397)
Q Consensus       146 ~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~  222 (397)
                      .+|.+||+|||+++.......  ......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||.+....+...
T Consensus       238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~  316 (370)
T 2psq_A          238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  316 (370)
T ss_dssp             TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            999999999999987654332  2334456788999999977 569999999999999999998 999999877666555


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .+.....                           ......++.++.+||.+||+.||.+|||+.|++++
T Consensus       317 ~~~~~~~---------------------------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          317 LLKEGHR---------------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHHTTCC---------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCC---------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4433211                           01123458899999999999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.9e-49  Score=372.99  Aligned_cols=261  Identities=22%  Similarity=0.322  Sum_probs=194.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ..++|.+.+.||+|+||+||+|++..++.   .||||++............+.+|+.+++.++||||+++++++......
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            36789999999999999999999887765   899999976554444456788999999999999999999999777655


Q ss_pred             ------EEEEEcccc-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEee
Q 015948           87 ------HLVFEFMET-DLETVIRNTN-----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLAD  154 (397)
Q Consensus        87 ------~lv~e~~~g-~L~~~~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~D  154 (397)
                            |+||||+.| +|..++....     ..+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~D  180 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD  180 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECC
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEee
Confidence                  999999984 8888876432     2589999999999999999999999999999999999999999999999


Q ss_pred             eccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948          155 FGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA  231 (397)
Q Consensus       155 FG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~  231 (397)
                      ||+++.......  ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+...... 
T Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~-  258 (323)
T 3qup_A          181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLAD-NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL-  258 (323)
T ss_dssp             CCC-----------------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-
T ss_pred             ccccccccccccccccccccCcccccCchhhcC-CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCC-
Confidence            999987644332  2223445678999999976 568999999999999999999 99999988877766665432111 


Q ss_pred             CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-------HHHHhcCCCCCCCC
Q 015948          232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-------AQQALEHRYFSSAP  298 (397)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-------~~e~l~hp~~~~~~  298 (397)
                                                ...+.+++++.+||.+||+.||.+|||       ++++++|+|+....
T Consensus       259 --------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~  306 (323)
T 3qup_A          259 --------------------------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS  306 (323)
T ss_dssp             --------------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred             --------------------------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence                                      112345899999999999999999999       67788899997643

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.3e-48  Score=368.69  Aligned_cols=253  Identities=20%  Similarity=0.232  Sum_probs=210.5

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   87 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++.....    ...+.+|+.+++.+ +||||+++++++..++..|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence            457899999999999999999999999999999999875432    23577999999999 9999999999999999999


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc-----EEEeeeccceeeC
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-----LKLADFGLARIFG  162 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~-----~kl~DFG~a~~~~  162 (397)
                      +||||++|+|.+++......+++..++.++.||+.||+|||++||+||||||+||||+.++.     +||+|||+++.+.
T Consensus        82 lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A           82 MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             EEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred             EEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence            99999988999999876667999999999999999999999999999999999999998887     9999999999765


Q ss_pred             CCCC-------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHHHhCCCC
Q 015948          163 SPDR-------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI---DQLGKIFAAFGTAT  232 (397)
Q Consensus       163 ~~~~-------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~  232 (397)
                      ....       .....+||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..   +.+..+......  
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~--  238 (330)
T 2izr_A          162 DPETKKHIPYREHKSLTGTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA--  238 (330)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH--
T ss_pred             cCCCCccccccccCCcCCCccccChHHHcC-CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc--
Confidence            4332       2346778999999999987 56899999999999999999999999885432   333333221000  


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                           .+........+ ++.+||..||..||.+||+++++++
T Consensus       239 ---------------------~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          239 ---------------------TPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             ---------------------SCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ---------------------CCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                                 00011112234 9999999999999999999988875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.8e-48  Score=361.76  Aligned_cols=256  Identities=20%  Similarity=0.229  Sum_probs=215.8

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~   85 (397)
                      ...+.++|++.+.||+|+||+||+|++..+|+.||||++.....    ...+.+|+.+++.+ +|+||+++++++.+...
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~   80 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH   80 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence            34578899999999999999999999999999999999864432    33577899999999 78999999999999999


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc-----EEEeeecccee
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-----LKLADFGLARI  160 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~-----~kl~DFG~a~~  160 (397)
                      .|+||||++|+|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++.++.     +||+|||+++.
T Consensus        81 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           81 NVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             eEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            9999999988999999887777999999999999999999999999999999999999987776     99999999987


Q ss_pred             eCCCCC-------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHHHhCC
Q 015948          161 FGSPDR-------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKIFAAFGT  230 (397)
Q Consensus       161 ~~~~~~-------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~~  230 (397)
                      ......       ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+   ....+..+..... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-  238 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ-  238 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH-
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcC-CCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc-
Confidence            754432       2345678999999999976 568999999999999999999999998753   3333333332210 


Q ss_pred             CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                            ..+.....+.+++++.+||.+||+.||.+||+++++++
T Consensus       239 ----------------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          239 ----------------------STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             ----------------------HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ----------------------CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                                  11223334567899999999999999999999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=1.6e-49  Score=373.38  Aligned_cols=257  Identities=25%  Similarity=0.385  Sum_probs=215.4

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC----CccchHHHHHHHHHhcC--CCCeeEEEee
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE----GVNFTALREIKLLKELK--SPHIIELIDA   79 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~E~~~l~~l~--hp~iv~l~~~   79 (397)
                      ....+.++|++.+.||+|+||+||+|++..+++.||||++.......    .....+.+|+.+++.++  |+||++++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~  116 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW  116 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence            35567899999999999999999999999999999999998654332    12235568999999996  4999999999


Q ss_pred             eecCCeEEEEEEccc--cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc-cCCcEEEeeec
Q 015948           80 FPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFG  156 (397)
Q Consensus        80 ~~~~~~~~lv~e~~~--g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~-~~~~~kl~DFG  156 (397)
                      +.+.+..++||||+.  ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||||+ .++.+||+|||
T Consensus       117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg  195 (320)
T 3a99_A          117 FERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG  195 (320)
T ss_dssp             EECSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred             EecCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence            999999999999997  6888888764 3589999999999999999999999999999999999999 78999999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      +++.....  ......||+.|+|||++.+...++.++|||||||++|+|++|..||.....      +...  .      
T Consensus       196 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~--~------  259 (320)
T 3a99_A          196 SGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG--Q------  259 (320)
T ss_dssp             TCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHC--C------
T ss_pred             cccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhcc--c------
Confidence            99876543  344567899999999997755567899999999999999999999975421      1111  0      


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                                          ......+++++.+||.+||..||.+|||++|+++||||.+...
T Consensus       260 --------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          260 --------------------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             --------------------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             --------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence                                0112346899999999999999999999999999999987543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-49  Score=379.97  Aligned_cols=261  Identities=19%  Similarity=0.267  Sum_probs=214.8

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEE-----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF   80 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~-----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~   80 (397)
                      +.....++|.+.+.||+|+||+||+|+     +..+++.||||++..... ......+.+|+.+++.++||||+++++++
T Consensus        65 ~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~  143 (367)
T 3l9p_A           65 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVS  143 (367)
T ss_dssp             SCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC-hhhHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            344557899999999999999999999     455778999999864322 22334577899999999999999999999


Q ss_pred             ecCCeEEEEEEccc-cCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cE
Q 015948           81 PHKGNLHLVFEFME-TDLETVIRNTN------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QL  150 (397)
Q Consensus        81 ~~~~~~~lv~e~~~-g~L~~~~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~  150 (397)
                      .+.+..|+|||||. |+|.+++....      ..+++..++.++.||+.||.|||++||+||||||+||||+.+|   .+
T Consensus       144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence            99999999999997 59999887653      3589999999999999999999999999999999999999655   49


Q ss_pred             EEeeeccceeeCCC--CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948          151 KLADFGLARIFGSP--DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA  227 (397)
Q Consensus       151 kl~DFG~a~~~~~~--~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~  227 (397)
                      ||+|||+++.....  ........+|+.|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+...
T Consensus       224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~  302 (367)
T 3l9p_A          224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG  302 (367)
T ss_dssp             EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred             EECCCccccccccccccccCCCcCCcccEECHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999864221  223344567889999999976 568999999999999999998 99999998877776666543


Q ss_pred             hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                      ...                           .....++..+.+||.+||+.||.+|||+.+++++.++.
T Consensus       303 ~~~---------------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          303 GRM---------------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             CCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC---------------------------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            211                           11134578999999999999999999999999987753

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.1e-48  Score=358.25  Aligned_cols=249  Identities=22%  Similarity=0.370  Sum_probs=212.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|++. +++.||+|++......   ...+.+|+.++++++||||+++++++.+++.+|+||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF   84 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence            578999999999999999999987 5678999999754322   345789999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Ccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~  168 (397)
                      ||++ |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  164 (269)
T 4hcu_A           85 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  164 (269)
T ss_dssp             ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             EeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence            9998 58888888777779999999999999999999999999999999999999999999999999998654322 122


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.......                
T Consensus       165 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~----------------  227 (269)
T 4hcu_A          165 TGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY----------------  227 (269)
T ss_dssp             TSTTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC----------------
T ss_pred             cCcccccccCCHHHhcC-CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCC----------------
Confidence            33445677999999976 568999999999999999999 999999888877776665432111                


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                 .....++++.+||.+||+.||++|||+.++++|
T Consensus       228 -----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          228 -----------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             -----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                       112348899999999999999999999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.7e-48  Score=364.55  Aligned_cols=252  Identities=22%  Similarity=0.361  Sum_probs=207.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++...  .......+.+|+.+++.++||||+++++++.+++..|+||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   86 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT   86 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence            68999999999999999999999999999999988542  2233446779999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc--
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR--  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~--  167 (397)
                      ||+. |+|.+++......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........  
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (310)
T 3s95_A           87 EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE  166 (310)
T ss_dssp             ECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred             EecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence            9998 5899998887777999999999999999999999999999999999999999999999999999876443221  


Q ss_pred             ------------ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          168 ------------FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       168 ------------~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                                  ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||........               
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~---------------  230 (310)
T 3s95_A          167 GLRSLKKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM---------------  230 (310)
T ss_dssp             -------------CCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT---------------
T ss_pred             ccccccccccccccccCCCcceeCHHHhcC-CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH---------------
Confidence                        125678999999999976 6689999999999999999999988865321100               


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                           ....... .    .......+.+++.+.+||.+||+.||++|||++++++
T Consensus       231 -----~~~~~~~-~----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          231 -----DFGLNVR-G----FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             -----TSSBCHH-H----HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----HHhhhhh-c----cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                 0000000 0    0001123456889999999999999999999999986

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=3e-49  Score=375.42  Aligned_cols=279  Identities=18%  Similarity=0.325  Sum_probs=220.3

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCcc---------------chHHHHHHHHHhcCCC
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN---------------FTALREIKLLKELKSP   71 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~---------------~~~~~E~~~l~~l~hp   71 (397)
                      ...+.++|++.+.||+|+||.||+|++  +|+.||||++..........               ..+.+|+.+++.++||
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~  103 (348)
T 2pml_X           26 KDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNE  103 (348)
T ss_dssp             SCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCT
T ss_pred             cccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCC
Confidence            334568999999999999999999998  89999999997654322211               5678999999999999


Q ss_pred             CeeEEEeeeecCCeEEEEEEcccc-CHHHH------HHhc-CCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcE
Q 015948           72 HIIELIDAFPHKGNLHLVFEFMET-DLETV------IRNT-NIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNL  142 (397)
Q Consensus        72 ~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~------~~~~-~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NI  142 (397)
                      ||+++++++.+.+.+|+||||++| +|.++      +... ...+++..++.++.||+.||.|||+ +||+||||||+||
T Consensus       104 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          104 YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI  183 (348)
T ss_dssp             TBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGE
T ss_pred             CcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhE
Confidence            999999999999999999999985 77776      4432 4569999999999999999999999 9999999999999


Q ss_pred             EEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCC-cchHHHHHHHHHHHHhCCCCCCCCCc-HHH
Q 015948          143 LIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA-GVDVWAAGCIFAELLNRRPFLQGSSD-IDQ  220 (397)
Q Consensus       143 Ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~-~~DiwSlG~il~ell~g~~pf~~~~~-~~~  220 (397)
                      |++.++.+||+|||++......  ......++..|+|||++.+...++. ++|||||||++|+|++|.+||.+.+. .+.
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  261 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL  261 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred             EEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence            9999999999999999876443  4455678999999999987545665 99999999999999999999998877 555


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ...+..... ..+......  .      ............+.++.++.+||.+||+.||.+|||++|+++||||.+..
T Consensus       262 ~~~i~~~~~-~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          262 FNNIRTKNI-EYPLDRNHF--L------YPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             HHHHTSCCC-CCCCSSSSS--T------TTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             HHHHhccCc-CCccchhhh--h------ccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            544432211 111000000  0      00001111222356799999999999999999999999999999998754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.9e-48  Score=364.99  Aligned_cols=260  Identities=24%  Similarity=0.331  Sum_probs=199.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|++..+|+.||||++............+.++..+++.++||||+++++++.+.+.+|+||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            67899999999999999999999999999999999865443333333445556788899999999999999999999999


Q ss_pred             EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||+++.+..+.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++....... ...
T Consensus       104 e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~  182 (318)
T 2dyl_A          104 ELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK-AKD  182 (318)
T ss_dssp             CCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred             eccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-ccc
Confidence            9997777776666566799999999999999999999995 99999999999999999999999999997764432 234


Q ss_pred             ccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          170 HQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      ...+++.|+|||++.+    ...++.++|||||||++|+|++|..||.... ..+.+..+......    .+        
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----~~--------  250 (318)
T 2dyl_A          183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP----LL--------  250 (318)
T ss_dssp             ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCC----CC--------
T ss_pred             ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCC----CC--------
Confidence            4568889999999852    3568899999999999999999999998744 44455554432110    00        


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                   .....++.++.+||.+||..||.+||+++++++||||..
T Consensus       251 -------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          251 -------------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             -------------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             -------------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence                         111245899999999999999999999999999999975

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3.3e-48  Score=354.77  Aligned_cols=250  Identities=22%  Similarity=0.280  Sum_probs=211.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|++.+.||+|+||+||+|.+. ++..||+|++.....   ....+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV   81 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence            3689999999999999999999876 567899999875432   234578999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-c
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~  167 (397)
                      |||++ |+|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ .
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  161 (268)
T 3sxs_A           82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS  161 (268)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred             EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence            99997 579888887766699999999999999999999999999999999999999999999999999987654332 2


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+.......               
T Consensus       162 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------  225 (268)
T 3sxs_A          162 SVGTKFPVKWSAPEVFHY-FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLY---------------  225 (268)
T ss_dssp             CCSCCCCGGGCCHHHHHH-SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC---------------
T ss_pred             ccCCCcCcccCCHHHHhc-cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCC---------------
Confidence            223445667999999976 568899999999999999998 999999888777666654321111               


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                  .....++.+.+||.+||+.||.+|||+.+++++
T Consensus       226 ------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          226 ------------RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             ------------CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ------------CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                        112347899999999999999999999999975

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.4e-48  Score=371.23  Aligned_cols=254  Identities=24%  Similarity=0.365  Sum_probs=212.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCC-------CcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeee
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKT-------GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAF   80 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~   80 (397)
                      ...++|++.+.||+|+||+||+|++..+       +..||||++..... ......+.+|+.+++.+ +||||+++++++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            3468999999999999999999997543       35799999875422 22234577999999999 999999999999


Q ss_pred             ecCCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE
Q 015948           81 PHKGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI  144 (397)
Q Consensus        81 ~~~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl  144 (397)
                      .+++.+|+||||+. |+|.+++....               ..+++..++.++.||+.||.|||++||+||||||+||||
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV  224 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE
Confidence            99999999999998 58999887754               359999999999999999999999999999999999999


Q ss_pred             ccCCcEEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015948          145 GSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQL  221 (397)
Q Consensus       145 ~~~~~~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~  221 (397)
                      +.++.+||+|||+++......  .......+|+.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~  303 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF  303 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            999999999999998765433  23344556788999999987 568999999999999999999 99999988776665


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          222 GKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       222 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ..+......                           .....+++++.+||.+||+.||++|||+.|++++
T Consensus       304 ~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          304 KLLKEGHRM---------------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHTTCCC---------------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCC---------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            555432111                           1113458999999999999999999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=4.9e-48  Score=361.83  Aligned_cols=260  Identities=26%  Similarity=0.357  Sum_probs=207.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC--CCCeeEEEeeeecCCeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--SPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~l~~~~~~~~~~~   87 (397)
                      ..++|.+.+.||+|+||.||+|.+. +++.||||++............+.+|+.+++.++  |+||+++++++.+++.+|
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~  104 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  104 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence            4678999999999999999999885 5899999999765544444456788999999997  499999999999999999


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      +|||+.+++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++....... 
T Consensus       105 lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~  182 (313)
T 3cek_A          105 MVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  182 (313)
T ss_dssp             EEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred             EEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence            999988889999988754 589999999999999999999999999999999999996 58999999999987644322 


Q ss_pred             -cccccccCceeeChhcccCc----------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCCC
Q 015948          167 -RFTHQVFARWYRAPELLFGA----------KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPS  234 (397)
Q Consensus       167 -~~~~~~~t~~y~aPE~l~~~----------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~  234 (397)
                       ......|++.|+|||++.+.          ..++.++|||||||++|+|++|..||...... ..+..+..   .... 
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~---~~~~-  258 (313)
T 3cek_A          183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID---PNHE-  258 (313)
T ss_dssp             -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC---TTSC-
T ss_pred             ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHh---cccc-
Confidence             22345689999999998641          35888999999999999999999999876543 22222221   1100 


Q ss_pred             CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                            ..+....+.++.+||.+||..||.+||+++|+++||||+...
T Consensus       259 ----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          259 ----------------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             ----------------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             ----------------------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence                                  011123478999999999999999999999999999997643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.1e-48  Score=375.84  Aligned_cols=251  Identities=21%  Similarity=0.319  Sum_probs=210.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|++..+++.||||++..... ......+.+|+.+|+.++||||+++++++..++.+|+||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC-HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            5789999999999999999999999999999999875422 222345678999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc-
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF-  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~-  168 (397)
                      |||+ |+|.+++...+..+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+++......... 
T Consensus       192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~  271 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS  271 (377)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred             EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence            9998 68999988776679999999999999999999999999999999999999999999999999998754322111 


Q ss_pred             -cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          169 -THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       169 -~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                       ....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+......                
T Consensus       272 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------  334 (377)
T 3cbl_A          272 GGLRQVPVKWTAPEALNY-GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL----------------  334 (377)
T ss_dssp             SSCCEEEGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCC----------------
T ss_pred             CCCCCCCcCcCCHhHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence             11234567999999976 458999999999999999998 99999988776665554332111                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 .....+++++.+||.+||+.||++|||++++++
T Consensus       335 -----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          335 -----------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                       111235789999999999999999999999875

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.9e-48  Score=371.46  Aligned_cols=254  Identities=24%  Similarity=0.387  Sum_probs=208.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEE-----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~-----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~   83 (397)
                      ..++|.+.+.||+|+||+||+|+     +..+++.||||++...... .....+.+|+.+++++ +||||+++++++.+.
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~   98 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKP   98 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCH-HHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence            36899999999999999999998     5567789999999754322 2234578999999999 789999999998775


Q ss_pred             C-eEEEEEEccc-cCHHHHHHhcCC-------------------------------------------------------
Q 015948           84 G-NLHLVFEFME-TDLETVIRNTNI-------------------------------------------------------  106 (397)
Q Consensus        84 ~-~~~lv~e~~~-g~L~~~~~~~~~-------------------------------------------------------  106 (397)
                      + .+|+|||||. |+|.+++.....                                                       
T Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (359)
T 3vhe_A           99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE  178 (359)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred             CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence            5 5999999998 588888876532                                                       


Q ss_pred             ----------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--CcccccccC
Q 015948          107 ----------FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFA  174 (397)
Q Consensus       107 ----------~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--~~~~~~~~t  174 (397)
                                .+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++......  .......+|
T Consensus       179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t  258 (359)
T 3vhe_A          179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP  258 (359)
T ss_dssp             -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred             cccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence                      18999999999999999999999999999999999999999999999999998764332  233456678


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA  253 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (397)
                      +.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+....+.+..........                      
T Consensus       259 ~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----------------------  315 (359)
T 3vhe_A          259 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM----------------------  315 (359)
T ss_dssp             GGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC----------------------
T ss_pred             ceeEChhhhcC-CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCC----------------------
Confidence            88999999976 568999999999999999998 999999877555554444331111                      


Q ss_pred             CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                          .....+++++.+||.+||+.||.+|||+.|+++|
T Consensus       316 ----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          316 ----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence                1112358899999999999999999999999875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.7e-48  Score=357.27  Aligned_cols=250  Identities=20%  Similarity=0.296  Sum_probs=209.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      -.++|++.+.||+|+||+||+|.+. ++..||+|++......   ...+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   97 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII   97 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence            3679999999999999999999876 6678999999754322   34578999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Cc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~  167 (397)
                      |||+. |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  177 (283)
T 3gen_A           98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS  177 (283)
T ss_dssp             ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence            99997 68999888766679999999999999999999999999999999999999999999999999998654322 12


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+++.|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+........              
T Consensus       178 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------------  242 (283)
T 3gen_A          178 SVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR--------------  242 (283)
T ss_dssp             TTSTTSCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC--------------
T ss_pred             ccCCccCcccCCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC--------------
Confidence            223445677999999976 468999999999999999998 9999998887777766654322111              


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                   ....++.+.+||.+||+.||.+|||++++++|
T Consensus       243 -------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          243 -------------PHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             -------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -------------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                         12347899999999999999999999999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-48  Score=366.15  Aligned_cols=254  Identities=23%  Similarity=0.369  Sum_probs=202.5

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC----CccchHHHHHHHHHhc----CCCCeeEEEe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE----GVNFTALREIKLLKEL----KSPHIIELID   78 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~E~~~l~~l----~hp~iv~l~~   78 (397)
                      ...+.++|++.+.||+|+||.||+|++..+++.||||++.......    .....+.+|+.+++++    +||||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            3557889999999999999999999999999999999997654321    1223455799999999    8999999999


Q ss_pred             eeecCCeEEEEEEc-cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc-cCCcEEEeee
Q 015948           79 AFPHKGNLHLVFEF-ME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-SHGQLKLADF  155 (397)
Q Consensus        79 ~~~~~~~~~lv~e~-~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~-~~~~~kl~DF  155 (397)
                      ++...+..|+|||| +. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~df  184 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF  184 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEc
Confidence            99999999999999 55 68888887654 599999999999999999999999999999999999999 8899999999


Q ss_pred             ccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          156 GLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       156 G~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      |++......  ......++..|+|||++.+...++.++|||||||++|+|++|+.||.....      +....       
T Consensus       185 g~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~-------  249 (312)
T 2iwi_A          185 GSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAE-------  249 (312)
T ss_dssp             SSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTC-------
T ss_pred             chhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhhhc-------
Confidence            999876543  344567889999999997655556689999999999999999999975321      11110       


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                           ..+...++.++.+||.+||+.||++|||++|+++||||...
T Consensus       250 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~  290 (312)
T 2iwi_A          250 ---------------------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP  290 (312)
T ss_dssp             ---------------------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred             ---------------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence                                 01123458999999999999999999999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=5.2e-48  Score=357.67  Aligned_cols=260  Identities=20%  Similarity=0.289  Sum_probs=203.6

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      +..+...++|++.+.||+|+||+||+|++.   ..||+|++............+.+|+.+++.++||||+++++++ ...
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~   92 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAP   92 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSS
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCC
Confidence            445567889999999999999999999754   3599999976655444455678999999999999999999965 566


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      .+++||||+. ++|.+.+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A           93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccc
Confidence            7899999998 688888877777799999999999999999999999999999999999999999999999999986543


Q ss_pred             C--CCcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          164 P--DRRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       164 ~--~~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .  ........||+.|+|||++..  ...++.++|||||||++|+|++|..||.+....+.+..+.......        
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------  244 (289)
T 3og7_A          173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS--------  244 (289)
T ss_dssp             -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC--------
T ss_pred             ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccC--------
Confidence            2  223345678999999999862  3567889999999999999999999999887777666655432111        


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    +........+++++.+||.+||+.||.+|||+.++++
T Consensus       245 --------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          245 --------------PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             --------------CCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------cchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                          1112233456899999999999999999999999986

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=2.6e-48  Score=367.53  Aligned_cols=261  Identities=26%  Similarity=0.408  Sum_probs=185.6

Q ss_pred             Chhhhcceeeee-eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHH-HHHHhcCCCCeeEEEeeeec--
Q 015948            7 SKKVADRYLKRE-VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREI-KLLKELKSPHIIELIDAFPH--   82 (397)
Q Consensus         7 ~~~~~~~y~i~~-~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~l~~~~~~--   82 (397)
                      ...+.++|.+.+ .||+|+||+||+|++..+|+.||||++....       ...+|+ ..++.+.||||++++++|..  
T Consensus        23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~   95 (336)
T 3fhr_A           23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMH   95 (336)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhcc
Confidence            345789999965 6999999999999999999999999986421       223343 44677799999999999876  


Q ss_pred             --CCeEEEEEEcccc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeee
Q 015948           83 --KGNLHLVFEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADF  155 (397)
Q Consensus        83 --~~~~~lv~e~~~g-~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DF  155 (397)
                        +..+|+|||||.| +|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+||+||
T Consensus        96 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Df  175 (336)
T 3fhr_A           96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDF  175 (336)
T ss_dssp             TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred             CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecc
Confidence              5568999999985 8999888764 369999999999999999999999999999999999999864   55999999


Q ss_pred             ccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          156 GLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       156 G~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      |+++.....  ......+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.........+........   
T Consensus       176 g~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---  249 (336)
T 3fhr_A          176 GFAKETTQN--ALQTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ---  249 (336)
T ss_dssp             TTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred             ccceecccc--ccccCCCCcCccChhhhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc---
Confidence            999876432  3345678999999999865 5688999999999999999999999987654433222111110000   


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                       .......+..+++++++||.+||+.||.+|||++|+++||||+..
T Consensus       250 -----------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          250 -----------------YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             ------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             -----------------cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence                             000112234568999999999999999999999999999999763

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.5e-48  Score=366.00  Aligned_cols=251  Identities=22%  Similarity=0.291  Sum_probs=205.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcE----EEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~----~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .++|++.+.||+|+||+||+|++..++..    ||+|.+.... .......+.+|+.+++.++||||+++++++. ++..
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   89 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL   89 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence            67899999999999999999999888876    6666664332 2223345668999999999999999999986 5668


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||+. |+|.+.+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        90 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           90 QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence            99999998 68999888766679999999999999999999999999999999999999999999999999998764433


Q ss_pred             C--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          166 R--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       166 ~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .  ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+....+......            
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------  236 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHF-GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERL------------  236 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBC------------
T ss_pred             ccccccCCCCcccccChHHhcc-CCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC------------
Confidence            2  2344556778999999976 568999999999999999999 99999988766655554332110            


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                     .....++.++.+||.+||..||.+|||+.+++++
T Consensus       237 ---------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          237 ---------------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             ---------------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             ---------------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                           1112246789999999999999999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.4e-48  Score=365.15  Aligned_cols=262  Identities=24%  Similarity=0.371  Sum_probs=191.4

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHH-HHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..++|++.+.||+|+||+||+|.+..+|+.||||++....... ....+.+|+. +++.++||||+++++++.+.+..|+
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l   98 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK-EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI   98 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHH-HHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCch-HHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence            3689999999999999999999999999999999997653322 2234445665 7777899999999999999999999


Q ss_pred             EEEccccCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           89 VFEFMETDLETVIRN----TNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        89 v~e~~~g~L~~~~~~----~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ||||++|+|..++..    ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++....
T Consensus        99 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  178 (327)
T 3aln_A           99 CMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD  178 (327)
T ss_dssp             EECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred             EEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence            999999988877763    245699999999999999999999999 999999999999999999999999999987643


Q ss_pred             CCCcccccccCceeeChhccc---CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCCCCCCCC
Q 015948          164 PDRRFTHQVFARWYRAPELLF---GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~---~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .. ......|++.|+|||++.   ....++.++|||||||++|+|++|..||.+.+.. +.+..+    ....+.     
T Consensus       179 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~-----  248 (327)
T 3aln_A          179 SI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV----VKGDPP-----  248 (327)
T ss_dssp             ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC----CCSCCC-----
T ss_pred             cc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH----hcCCCC-----
Confidence            32 233447889999999984   2356899999999999999999999999865322 111000    000000     


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                    .........+++.+.+||.+||..||.+|||+.++++||||..
T Consensus       249 --------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          249 --------------QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             --------------CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             --------------CCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence                          0001122456899999999999999999999999999999964

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=5e-48  Score=356.25  Aligned_cols=253  Identities=24%  Similarity=0.384  Sum_probs=200.2

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ...++|++.+.||+|+||+||+|++..+   +..||+|.+..... ......+.+|+.+++.++||||+++++++. ++.
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~   89 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP   89 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence            4578999999999999999999998654   45799998764322 223445778999999999999999999984 567


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .|+||||+. |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A           90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence            899999998 5899998877767999999999999999999999999999999999999999999999999999876443


Q ss_pred             CC-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          165 DR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       165 ~~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .. ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.....             
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~-------------  235 (281)
T 1mp8_A          170 TYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER-------------  235 (281)
T ss_dssp             ---------CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC-------------
T ss_pred             cccccccCCCcccccChhhccc-CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCC-------------
Confidence            22 2233455678999999975 568999999999999999996 9999998877766665543210             


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                    ....+.+++++.+||.+||+.||++|||+.+++++
T Consensus       236 --------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          236 --------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             --------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                          01224568999999999999999999999999863

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2.5e-47  Score=353.84  Aligned_cols=256  Identities=18%  Similarity=0.210  Sum_probs=209.5

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEee-eecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA-FPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~-~~~~~~   85 (397)
                      ...+.++|++.+.||+|+||+||+|++..+|+.||||++.....    ...+.+|+.+++.++|++++..+.. +...+.
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (296)
T 3uzp_A            4 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             -CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred             cceeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCc
Confidence            34578999999999999999999999999999999999865432    2357899999999999776655544 467788


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE---ccCCcEEEeeeccceeeC
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI---GSHGQLKLADFGLARIFG  162 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl---~~~~~~kl~DFG~a~~~~  162 (397)
                      .|+||||++|+|.+++......+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           80 NVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             eEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            99999999889999998767779999999999999999999999999999999999999   488999999999998875


Q ss_pred             CCCC-------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHHHhCCCC
Q 015948          163 SPDR-------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---IDQLGKIFAAFGTAT  232 (397)
Q Consensus       163 ~~~~-------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~  232 (397)
                      ....       ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.   ...+..+.....   
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---  235 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM---  235 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH---
T ss_pred             ccccccccccccccccccccccCChhhhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc---
Confidence            5432       2345678999999999977 5689999999999999999999999987432   222333222100   


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                          ..+.....+.+++++.+||.+||+.||.+|||++++++
T Consensus       236 --------------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          236 --------------------STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             --------------------HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             --------------------CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                                01112233456899999999999999999999999876

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=8.5e-48  Score=356.81  Aligned_cols=256  Identities=18%  Similarity=0.216  Sum_probs=204.1

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEee-eecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA-FPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~-~~~~~~   85 (397)
                      ...+.++|++.+.||+|+||+||+|++..+++.||||++.....    ...+.+|+.+++.++|++++..+.. +...+.
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (296)
T 4hgt_A            4 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             -------CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred             ccccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCc
Confidence            44678999999999999999999999999999999998765433    2357789999999998776665554 477888


Q ss_pred             EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE---ccCCcEEEeeeccceeeC
Q 015948           86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI---GSHGQLKLADFGLARIFG  162 (397)
Q Consensus        86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl---~~~~~~kl~DFG~a~~~~  162 (397)
                      .|+||||++|+|.+++......+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++...
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           80 NVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             eEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            99999999889999998777779999999999999999999999999999999999999   788999999999998775


Q ss_pred             CCCC-------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHHHhCCCC
Q 015948          163 SPDR-------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI---DQLGKIFAAFGTAT  232 (397)
Q Consensus       163 ~~~~-------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~  232 (397)
                      ....       ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..   ..+..+....    
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----  234 (296)
T 4hgt_A          160 DARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK----  234 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH----
T ss_pred             CcccCccCCCCcccccCCCccccchHHhcC-CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc----
Confidence            4332       2335678999999999977 56899999999999999999999999875432   2222221110    


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                         ...+.......+++++.+||.+||+.||++|||++++++
T Consensus       235 -------------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          235 -------------------MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -------------------HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -------------------ccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                               011122333556899999999999999999999999876

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=6.8e-48  Score=363.32  Aligned_cols=252  Identities=21%  Similarity=0.353  Sum_probs=202.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEE----EEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~----aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ..++|.+.+.||+|+||+||+|++..+++.+    |+|.+.... .......+.+|+.++++++||||+++++++.++. 
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-   90 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-   90 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence            4689999999999999999999998888765    666665332 2233456789999999999999999999998765 


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .++|+||+. |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence            778889887 7899999887778999999999999999999999999999999999999999999999999999876544


Q ss_pred             CCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 DRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ...  .....+|..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+......           
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-----------  238 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL-----------  238 (327)
T ss_dssp             CC-------CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-----------
T ss_pred             cccccccCCCccccccChHHhcc-CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCC-----------
Confidence            322  223445778999999976 568999999999999999999 99999987766554444322110           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                      ...+..+.++.+|+.+||+.||.+||++.+++++
T Consensus       239 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          239 ----------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             ----------------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             ----------------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                            1123357899999999999999999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-48  Score=366.68  Aligned_cols=253  Identities=23%  Similarity=0.326  Sum_probs=210.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ..++|++.+.||+|+||+||+|++.     .+++.||||++..... ......+.+|+.+++.++||||+++++++.+.+
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  123 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVCAVGK  123 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence            3689999999999999999999987     3558999999875432 223346778999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTN-----------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPN  140 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~-----------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~  140 (397)
                      .+|+||||++ |+|.+++....                       ..+++..++.++.||+.||.|||++||+||||||+
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~  203 (343)
T 1luf_A          124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR  203 (343)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcc
Confidence            9999999998 58998887642                       46999999999999999999999999999999999


Q ss_pred             cEEEccCCcEEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCc
Q 015948          141 NLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSD  217 (397)
Q Consensus       141 NILl~~~~~~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~  217 (397)
                      |||++.++.+||+|||+++......  .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+.
T Consensus       204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  282 (343)
T 1luf_A          204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH  282 (343)
T ss_dssp             GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence            9999999999999999998654322  22334567888999999976 568999999999999999998 9999998877


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          218 IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       218 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .+....+.....                           ......++.++.+||.+||+.||.+||++.+++++
T Consensus       283 ~~~~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          283 EEVIYYVRDGNI---------------------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             HHHHHHHHTTCC---------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHhCCCc---------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            766665543211                           01123458899999999999999999999999863

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.1e-48  Score=378.68  Aligned_cols=256  Identities=25%  Similarity=0.337  Sum_probs=200.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..+|.+.+.||+|+||+||. ....+|+.||||++.....     ..+.+|+.+|+.+ +|||||++++++.+...+|+|
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence            35699999999999999764 4456889999999864322     2356899999999 799999999999999999999


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---C--CcEEEeeeccceeeCCC
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---H--GQLKLADFGLARIFGSP  164 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~--~~~kl~DFG~a~~~~~~  164 (397)
                      ||||+|+|.+++......+.+..++.++.||+.||.|||++||+||||||+||||+.   +  ..+||+|||+|+.....
T Consensus        97 ~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~  176 (432)
T 3p23_A           97 IELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG  176 (432)
T ss_dssp             EECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred             EECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence            999999999999887766777778899999999999999999999999999999953   2  35889999999876533


Q ss_pred             C---CcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          165 D---RRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       165 ~---~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      .   ......+||+.|+|||++.+  ...++.++|||||||++|||++ |.+||......... .+   .+.......  
T Consensus       177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-~~---~~~~~~~~~--  250 (432)
T 3p23_A          177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-IL---LGACSLDCL--  250 (432)
T ss_dssp             ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-HH---TTCCCCTTS--
T ss_pred             CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-HH---hccCCcccc--
Confidence            2   23445678999999999974  3457889999999999999999 89999765443322 11   111110000  


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                         ......+..+++||.+||+.||.+|||++|+++||||.+.
T Consensus       251 -------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          251 -------------------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             -------------------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             -------------------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence                               0001125678999999999999999999999999999763

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=3e-47  Score=351.98  Aligned_cols=253  Identities=20%  Similarity=0.262  Sum_probs=209.9

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-----cchHHHHHHHHHhcCCCCeeEEEeeee
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-----NFTALREIKLLKELKSPHIIELIDAFP   81 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-----~~~~~~E~~~l~~l~hp~iv~l~~~~~   81 (397)
                      .....++|++.+.||+|+||+||+|++..+++.||+|++.........     ...+.+|+.+++.++||||+++++++.
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   93 (287)
T 4f0f_A           14 PTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH   93 (287)
T ss_dssp             CBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET
T ss_pred             hhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec
Confidence            444578999999999999999999999999999999998765433221     146778999999999999999999997


Q ss_pred             cCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCc-----EEEe
Q 015948           82 HKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQ-----LKLA  153 (397)
Q Consensus        82 ~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~-----~kl~  153 (397)
                      +..  ++||||+. |+|.+.+......+++..++.++.||+.||+|||++|  |+||||||+|||++.++.     +||+
T Consensus        94 ~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~  171 (287)
T 4f0f_A           94 NPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA  171 (287)
T ss_dssp             TTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred             CCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence            766  69999998 6898998887778999999999999999999999999  999999999999988876     9999


Q ss_pred             eeccceeeCCCCCcccccccCceeeChhcccC-ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCC
Q 015948          154 DFGLARIFGSPDRRFTHQVFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ--LGKIFAAFGT  230 (397)
Q Consensus       154 DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~~  230 (397)
                      |||+++....   ......+|+.|+|||++.+ ...++.++|||||||++|+|++|..||...+....  ...+... +.
T Consensus       172 Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~  247 (287)
T 4f0f_A          172 DFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE-GL  247 (287)
T ss_dssp             CCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHS-CC
T ss_pred             CCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhcc-CC
Confidence            9999985433   3445678999999999843 34578899999999999999999999987654332  2222211 10


Q ss_pred             CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .                         ......+++++.+||.+||+.||.+|||++|+++
T Consensus       248 ~-------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          248 R-------------------------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             C-------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             C-------------------------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            0                         1122356899999999999999999999999986

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.4e-48  Score=362.35  Aligned_cols=251  Identities=22%  Similarity=0.355  Sum_probs=201.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEE----EEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTV----AIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~----aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ..++|++.+.||+|+||+||+|++..+++.+    |+|.+... ........+.+|+.+++.++||||+++++++..+. 
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-   90 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-   90 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence            3689999999999999999999999888866    55555432 22334456789999999999999999999998765 


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .++|+||+. |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        91 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred             ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence            778888887 6899999887778999999999999999999999999999999999999999999999999999876443


Q ss_pred             CC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 DR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      ..  ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+....+....+......           
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~-----------  238 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL-----------  238 (327)
T ss_dssp             ---------CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-----------
T ss_pred             cccccccCCCccccccCHHHHcC-CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-----------
Confidence            32  2233445778999999976 568999999999999999999 99999988766655444332110           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                      ...+.++.++.+||.+||..||.+||++.|+++
T Consensus       239 ----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          239 ----------------PQPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             ----------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                            112345889999999999999999999999987

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=5.4e-48  Score=358.45  Aligned_cols=271  Identities=19%  Similarity=0.305  Sum_probs=202.4

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP   81 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~   81 (397)
                      ......++|++.+.||+|+||+||+|+    +..+++.||||++....  ......+.+|+.+++.++||||+++++++.
T Consensus         4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   81 (295)
T 3ugc_A            4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCY   81 (295)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             cCcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            345568999999999999999999998    56789999999986432  222345778999999999999999999985


Q ss_pred             c--CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           82 H--KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        82 ~--~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                      .  ...+|+||||++ |+|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           82 SAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             HHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             cCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence            4  456999999997 5999999887667999999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          159 RIFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       159 ~~~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      +.......   ......++..|+|||++.+ ..++.++|||||||++|+|++|..||......  ...   ..+......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--~~~---~~~~~~~~~  235 (295)
T 3ugc_A          162 KVLPQDKEFFKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMR---MIGNDKQGQ  235 (295)
T ss_dssp             C-------------CTTCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH--HHH---HHCTTCCTH
T ss_pred             ccccCCcceeeeccCCCCccceeCcHHhcC-CCCChHHHHHHHHHHHHHHHhcccccCCChHH--HHh---hhcCccccc
Confidence            87644321   2233446677999999976 56899999999999999999999887643211  000   000000000


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ..      ...................+++++.+||.+||+.||++|||+.|+++
T Consensus       236 ~~------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          236 MI------VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HH------HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hh------HHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            00      00000000000011223456899999999999999999999999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.6e-48  Score=377.09  Aligned_cols=277  Identities=21%  Similarity=0.298  Sum_probs=212.3

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC--e
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--N   85 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~   85 (397)
                      ..+.++|++.+.||+|+||+||+|++..+|+.||||++....... ....+.+|+.+|+.++||||+++++++...+  .
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~   83 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH   83 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS-CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCe
Confidence            346789999999999999999999999999999999997543322 2345678999999999999999999987655  7


Q ss_pred             EEEEEEccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE----ccCCcEEEeeeccc
Q 015948           86 LHLVFEFME-TDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLA  158 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl----~~~~~~kl~DFG~a  158 (397)
                      .|+|||||. |+|.+++....  ..+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred             eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence            899999997 58888876543  238999999999999999999999999999999999999    77778999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCc-------cCCCCcchHHHHHHHHHHHHhCCCCCCCC----CcHHHHHHHHHH
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGA-------KQYGAGVDVWAAGCIFAELLNRRPFLQGS----SDIDQLGKIFAA  227 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~-------~~~~~~~DiwSlG~il~ell~g~~pf~~~----~~~~~~~~i~~~  227 (397)
                      +..... .......||+.|+|||++.+.       ..++.++|||||||++|||++|..||...    ...+.+..+...
T Consensus       164 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~  242 (396)
T 4eut_A          164 RELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (396)
T ss_dssp             EECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred             eEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence            876443 334456789999999998641       45788999999999999999999999753    334444444442


Q ss_pred             hCCCCCCCCCCCCCCcc-ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          228 FGTATPSQWPDLAYLPD-YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                         .++..+........ ...+.. ..+....+...++..+.+||.+||..||++||++.|+++
T Consensus       243 ---~p~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          243 ---KPSGAISGVQKAENGPIDWSG-DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             ---CCTTCCEEEECSTTCCEEEES-SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             ---CCcccchhheeccCCCcccCc-cCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence               22222211111100 001100 111112222334678899999999999999999999865

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-47  Score=362.37  Aligned_cols=254  Identities=23%  Similarity=0.327  Sum_probs=209.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .++|.+.+.||+|+||+||+|++     ..++..||||++.... .......+.+|+.+|+++ +||||+++++++...+
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            57899999999999999999997     3456789999997543 233345688999999999 8999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCC----------------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCc
Q 015948           85 NLHLVFEFME-TDLETVIRNTNI----------------------FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNN  141 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~----------------------~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~N  141 (397)
                      .+|+||||++ |+|.+++.....                      .+++..++.++.||+.||.|||++||+||||||+|
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  202 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  202 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence            9999999997 599998876543                      37899999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 015948          142 LLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDI  218 (397)
Q Consensus       142 ILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~  218 (397)
                      |||+.++.+||+|||++........  ......+|+.|+|||++.+ ..++.++|||||||++|+|++ |..||.+....
T Consensus       203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  281 (344)
T 1rjb_A          203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  281 (344)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence            9999999999999999987644332  2334556778999999976 568999999999999999998 99999887765


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCC
Q 015948          219 DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR  292 (397)
Q Consensus       219 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp  292 (397)
                      ..+..+.......                          .....+++++.+||.+||..||.+|||+.++++|-
T Consensus       282 ~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          282 ANFYKLIQNGFKM--------------------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             HHHHHHHHTTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHhcCCCC--------------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            5555544321100                          11124589999999999999999999999999863

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=9.9e-48  Score=359.50  Aligned_cols=253  Identities=23%  Similarity=0.349  Sum_probs=210.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      ..++|.+.+.||+|+||.||+|.+.     .++..||+|++..... ......+.+|+.+++.++||||+++++++.+.+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   99 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG   99 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence            3689999999999999999999883     4568999999875432 222345778999999999999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTN-----------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPN  140 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~-----------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~  140 (397)
                      .+|+||||+. |+|.+++....                       ..+++..++.++.||+.||.|||++||+||||||+
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  179 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR  179 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchh
Confidence            9999999998 68988887643                       23899999999999999999999999999999999


Q ss_pred             cEEEccCCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCc
Q 015948          141 NLLIGSHGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSD  217 (397)
Q Consensus       141 NILl~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~  217 (397)
                      |||++.++.+||+|||+++........  .....+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+...
T Consensus       180 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             eEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999877543322  233456778999999976 568999999999999999999 9999988776


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          218 IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       218 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ......+.....                           ......+++++.+||.+||+.||.+|||+.+++++
T Consensus       259 ~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          259 ERLFNLLKTGHR---------------------------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             GGHHHHHHTTCC---------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhhcCCc---------------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            655544432210                           11223568999999999999999999999999864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=9.4e-48  Score=375.99  Aligned_cols=264  Identities=25%  Similarity=0.382  Sum_probs=202.3

Q ss_pred             cccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948            4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH   82 (397)
Q Consensus         4 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~   82 (397)
                      .++...+.+.|.+.+.||+|+||+||.+ ...+|+.||||++....     ...+.+|+.+|+.+ +||||+++++++.+
T Consensus         7 p~~~~~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~   80 (434)
T 2rio_A            7 PNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETT   80 (434)
T ss_dssp             -CCSCSCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             cchhhhhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEec
Confidence            4567778899999999999999999875 45679999999986432     23567899999986 89999999999999


Q ss_pred             CCeEEEEEEccccCHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---------
Q 015948           83 KGNLHLVFEFMETDLETVIRNTNIF------LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---------  147 (397)
Q Consensus        83 ~~~~~lv~e~~~g~L~~~~~~~~~~------l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---------  147 (397)
                      ++.+|+|||||+|+|.+++......      .++..++.++.||+.||+|||++||+||||||+||||+.+         
T Consensus        81 ~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~  160 (434)
T 2rio_A           81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT  160 (434)
T ss_dssp             SSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTT
T ss_pred             CCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccccccc
Confidence            9999999999999999998765421      1233457799999999999999999999999999999754         


Q ss_pred             ----CcEEEeeeccceeeCCCCC----cccccccCceeeChhcccC------ccCCCCcchHHHHHHHHHHHHh-CCCCC
Q 015948          148 ----GQLKLADFGLARIFGSPDR----RFTHQVFARWYRAPELLFG------AKQYGAGVDVWAAGCIFAELLN-RRPFL  212 (397)
Q Consensus       148 ----~~~kl~DFG~a~~~~~~~~----~~~~~~~t~~y~aPE~l~~------~~~~~~~~DiwSlG~il~ell~-g~~pf  212 (397)
                          +.+||+|||+++.......    .....+||+.|+|||++.+      ...++.++|||||||++|||++ |.+||
T Consensus       161 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf  240 (434)
T 2rio_A          161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF  240 (434)
T ss_dssp             CCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCC
Confidence                4799999999998754332    2335678999999999965      2468999999999999999998 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCC
Q 015948          213 QGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR  292 (397)
Q Consensus       213 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp  292 (397)
                      .+.....  ..+.......  ....   .                .....+++++.+||.+||+.||.+|||+.++++||
T Consensus       241 ~~~~~~~--~~i~~~~~~~--~~~~---~----------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp  297 (434)
T 2rio_A          241 GDKYSRE--SNIIRGIFSL--DEMK---C----------------LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP  297 (434)
T ss_dssp             CSTTTHH--HHHHHTCCCC--CCCT---T----------------CCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             CCchhhH--HHHhcCCCCc--cccc---c----------------cccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence            7665443  2233221110  0000   0                00112367899999999999999999999999999


Q ss_pred             CCCC
Q 015948          293 YFSS  296 (397)
Q Consensus       293 ~~~~  296 (397)
                      ||..
T Consensus       298 ~f~~  301 (434)
T 2rio_A          298 LFWP  301 (434)
T ss_dssp             GGSC
T ss_pred             ccCC
Confidence            9964

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.1e-47  Score=355.10  Aligned_cols=249  Identities=16%  Similarity=0.245  Sum_probs=206.3

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCC-------cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTG-------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF   80 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-------~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~   80 (397)
                      ....++|++.+.||+|+||+||+|++..++       ..||+|++....  ......+.+|+.+++.++||||+++++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   81 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVC   81 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            345789999999999999999999998877       469999986432  23345678999999999999999999999


Q ss_pred             ecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc--------EE
Q 015948           81 PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--------LK  151 (397)
Q Consensus        81 ~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~--------~k  151 (397)
                      .+++..|+||||+. |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.        +|
T Consensus        82 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           82 VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             CCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             EeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceee
Confidence            99999999999998 6899998877666999999999999999999999999999999999999999887        99


Q ss_pred             EeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCC
Q 015948          152 LADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGT  230 (397)
Q Consensus       152 l~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~  230 (397)
                      |+|||++.....    .....++..|+|||++.+...++.++|||||||++|+|++| .+||......... .+..... 
T Consensus       162 l~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~~~~~~-  235 (289)
T 4fvq_A          162 LSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-QFYEDRH-  235 (289)
T ss_dssp             ECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHTTC-
T ss_pred             eccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-HHhhccC-
Confidence            999999875432    22345678899999998756799999999999999999995 5566554443333 3222100 


Q ss_pred             CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                                 ......+.++.+||.+||+.||.+|||+.++++|
T Consensus       236 ---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          236 ---------------------------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             ---------------------------CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ---------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                                       1112336789999999999999999999999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=5.7e-48  Score=370.20  Aligned_cols=251  Identities=21%  Similarity=0.328  Sum_probs=199.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|.+.+.||+|+||+||+|++.   .++..||||++.... .......+.+|+.++++++||||+++++++.+.+.+|
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  122 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM  122 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence            568999999999999999999876   467789999987543 2223446789999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||++ |+|.+++.+.+..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  202 (373)
T 2qol_A          123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE  202 (373)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence            9999997 689999988777799999999999999999999999999999999999999999999999999987654322


Q ss_pred             c---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 R---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .   .....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+.......           
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~-----------  270 (373)
T 2qol_A          203 AAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP-----------  270 (373)
T ss_dssp             -----------CTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECC-----------
T ss_pred             cceeccCCCcCCCccChhhhcc-CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-----------
Confidence            1   122234567999999976 568999999999999999997 999999887776666554321111           


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                      ....++..+.+||.+||+.||.+||++.++++
T Consensus       271 ----------------~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          271 ----------------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             ----------------CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                            11235789999999999999999999999876

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=3.5e-47  Score=353.92  Aligned_cols=262  Identities=21%  Similarity=0.346  Sum_probs=207.7

Q ss_pred             cccChhhhcceeeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEee
Q 015948            4 VDLSKKVADRYLKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA   79 (397)
Q Consensus         4 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~   79 (397)
                      ++......++|++.+.||+|+||.||+|+    +..+++.||+|++..... ......+.+|+.+++.++||||++++++
T Consensus        13 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~   91 (302)
T 4e5w_A           13 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGI   91 (302)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             cChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeE
Confidence            34455557889999999999999999998    567899999999875542 2233567899999999999999999999


Q ss_pred             eecC--CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948           80 FPHK--GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        80 ~~~~--~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                      +.+.  ..+|+||||++ |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        92 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  171 (302)
T 4e5w_A           92 CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG  171 (302)
T ss_dssp             EEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             EecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccc
Confidence            9876  67999999998 58999987777779999999999999999999999999999999999999999999999999


Q ss_pred             cceeeCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-----------HHHH
Q 015948          157 LARIFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-----------DQLG  222 (397)
Q Consensus       157 ~a~~~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-----------~~~~  222 (397)
                      ++........   ......+|..|+|||++.+ ..++.++|||||||++|+|++|..|+......           ....
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  250 (302)
T 4e5w_A          172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVT  250 (302)
T ss_dssp             TCEECCTTCCEEECCCCTTCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHH
T ss_pred             ccccccCCCcceeccCCCCCCccccCCeeecC-CCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHH
Confidence            9988755432   2334567788999999976 45789999999999999999999875422100           0011


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .+.....                       ........+.+++++.+||.+||+.||.+|||+.++++
T Consensus       251 ~~~~~~~-----------------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          251 RLVNTLK-----------------------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHH-----------------------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHh-----------------------ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            1111100                       00111223456899999999999999999999999985

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=5.9e-47  Score=353.95  Aligned_cols=260  Identities=25%  Similarity=0.459  Sum_probs=198.6

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecC
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHK   83 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~   83 (397)
                      +.+....++|++.+.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.+++.++||||+++++++...
T Consensus        25 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  104 (310)
T 2wqm_A           25 DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED  104 (310)
T ss_dssp             GGTTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             CcccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            34455678999999999999999999999999999999999764322 22344577899999999999999999999999


Q ss_pred             CeEEEEEEcccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           84 GNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        84 ~~~~lv~e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      +.+|+||||+.| +|.+++..   ....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~  184 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR  184 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence            999999999985 88877754   35569999999999999999999999999999999999999999999999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      .............+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.. ....+........      ++ 
T Consensus       185 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~-  256 (310)
T 2wqm_A          185 FFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD------YP-  256 (310)
T ss_dssp             --------------CCSSCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC------SC-
T ss_pred             eecCCCccccccCCCeeEeChHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc------CC-
Confidence            77555444455678899999999976 568999999999999999999999997653 2222222221110      00 


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                        ......++.++.+||.+||..||.+|||+.++++
T Consensus       257 ------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          257 ------------------PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             ------------------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                              0011345899999999999999999999999986

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.7e-47  Score=348.29  Aligned_cols=249  Identities=22%  Similarity=0.358  Sum_probs=211.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++......   ...+.+|+.+++.++||||+++++++.+++.+|+||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT   82 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence            478999999999999999999986 6788999999754332   346789999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Ccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRF  168 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~  168 (397)
                      ||++ |+|.+++......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... ...
T Consensus        83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  162 (267)
T 3t9t_A           83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  162 (267)
T ss_dssp             CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence            9998 58999988877779999999999999999999999999999999999999999999999999998654321 122


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.......                
T Consensus       163 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~----------------  225 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY----------------  225 (267)
T ss_dssp             TSTTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC----------------
T ss_pred             ccccccccccChhhhcC-CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC----------------
Confidence            33455678999999976 568999999999999999999 899999887777666654431111                


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                 .....+..+.+||.+||+.||.+|||+.+++++
T Consensus       226 -----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          226 -----------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             -----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                       112347899999999999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=2.1e-47  Score=353.04  Aligned_cols=252  Identities=22%  Similarity=0.342  Sum_probs=213.5

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ....++|++.+.||+|+||+||+|.+..++..||+|++....   .....+.+|+.+++.++||||+++++++.+++.+|
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            345789999999999999999999999999999999986432   23446779999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           88 LVFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      +||||+. |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            9999998 6899888764 3458999999999999999999999999999999999999999999999999998765433


Q ss_pred             C-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 R-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+.......+......             
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~-------------  231 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM-------------  231 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC-------------
T ss_pred             cccccCCccccCcCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCC-------------
Confidence            2 2333456778999999976 568999999999999999999 99999887766555544332111             


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    .....+++.+.+||.+||..||.+|||++++++
T Consensus       232 --------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          232 --------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             --------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence                          112345899999999999999999999999976

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=3.4e-47  Score=355.67  Aligned_cols=253  Identities=25%  Similarity=0.323  Sum_probs=211.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .++|.+.+.||+|+||+||+|.+     ..+++.||+|++..... ......+.+|+.+++++ +||||+++++++.+.+
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            68999999999999999999985     45678999999875432 12234677999999999 9999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCC-----------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           85 NLHLVFEFME-TDLETVIRNTNI-----------------FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~-----------------~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                      ..|+||||++ |+|.+++.....                 .+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  180 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH  180 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC
Confidence            9999999998 589998876543                 4899999999999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK  223 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~  223 (397)
                      ++.+||+|||+++.......  ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.........
T Consensus       181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  259 (313)
T 1t46_A          181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK  259 (313)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH
T ss_pred             CCCEEEccccccccccccccceeccCCCCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHH
Confidence            99999999999987654432  2234456778999999876 568999999999999999998 9999988776555555


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      +.......                          .....++.++.+||.+||..||.+|||+.|++++
T Consensus       260 ~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          260 MIKEGFRM--------------------------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHHTCCC--------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhccCCCC--------------------------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            44431110                          0112458999999999999999999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-47  Score=356.55  Aligned_cols=257  Identities=23%  Similarity=0.324  Sum_probs=200.0

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .....++|++.+.||+|+||+||+|++..+++.||+|++....... .....+.+|+.+++.++||||+++++++..++.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 2h34_A           29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ  108 (309)
T ss_dssp             -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe
Confidence            3446789999999999999999999999999999999987543322 223457789999999999999999999999999


Q ss_pred             EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      +|+||||++| +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            9999999985 8888887643 5999999999999999999999999999999999999999999999999999876443


Q ss_pred             C-CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          165 D-RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       165 ~-~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+... +.......               
T Consensus       188 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~---------------  250 (309)
T 2h34_A          188 KLTQLGNTVGTLYYMAPERFSE-SHATYRADIYALTCVLYECLTGSPPYQGDQLSV-MGAHINQA---------------  250 (309)
T ss_dssp             ---------CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH-HHHHHHSC---------------
T ss_pred             ccccccccCCCcCccCHHHHcC-CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH-HHHHhccC---------------
Confidence            2 23345678899999999976 568999999999999999999999998765442 22222210               


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-CHHHHhc
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-TAQQALE  290 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-t~~e~l~  290 (397)
                               .+......+.++.++.+||.+||..||++|| +++++++
T Consensus       251 ---------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          251 ---------IPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             ---------CCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             ---------CCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence                     0111233456789999999999999999999 7888775

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=8.3e-48  Score=361.56  Aligned_cols=254  Identities=21%  Similarity=0.344  Sum_probs=211.1

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK   83 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~   83 (397)
                      ...++|++.+.||+|+||+||+|.+.     .+++.||||.+..... ......+.+|+.+++.++||||+++++++.+.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            35789999999999999999999876     3578899999874322 12233577899999999999999999999999


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEe
Q 015948           84 GNLHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLA  153 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~  153 (397)
                      +..|+||||++ |+|.+++....         ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~  180 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG  180 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEEC
Confidence            99999999998 58888886532         347899999999999999999999999999999999999999999999


Q ss_pred             eeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCC
Q 015948          154 DFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT  230 (397)
Q Consensus       154 DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~  230 (397)
                      |||+++......  .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+..... 
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-  258 (322)
T 1p4o_A          181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-  258 (322)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC-
T ss_pred             cCccccccccccccccccCCCCCCCccChhhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCc-
Confidence            999998654322  12234456788999999876 568999999999999999999 8999998877666655543210 


Q ss_pred             CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                                ......++..+.+||.+||+.||.+|||+.|++++
T Consensus       259 --------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          259 --------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             --------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                                      11123458999999999999999999999999975

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=6.5e-47  Score=357.56  Aligned_cols=253  Identities=24%  Similarity=0.364  Sum_probs=209.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEEC-------CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeee
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDT-------KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP   81 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~   81 (397)
                      -.++|++.+.||+|+||+||+|++.       .++..||||++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  111 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACT  111 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence            3689999999999999999999986       4567899999875432 22234577899999999 8999999999999


Q ss_pred             cCCeEEEEEEccc-cCHHHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc
Q 015948           82 HKGNLHLVFEFME-TDLETVIRNTNI---------------FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG  145 (397)
Q Consensus        82 ~~~~~~lv~e~~~-g~L~~~~~~~~~---------------~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~  145 (397)
                      +.+.+|+||||+. |+|.+++.....               .+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  191 (334)
T 2pvf_A          112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT  191 (334)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred             cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEc
Confidence            9999999999998 589888876532               389999999999999999999999999999999999999


Q ss_pred             cCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 015948          146 SHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLG  222 (397)
Q Consensus       146 ~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~  222 (397)
                      .++.+||+|||+++.......  ......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+...
T Consensus       192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  270 (334)
T 2pvf_A          192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  270 (334)
T ss_dssp             TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             CCCCEEEccccccccccccccccccCCCCcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence            999999999999987754432  2233456778999999976 568999999999999999999 999999887766665


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .+......                           .....++.++.+||.+||..||.+|||+.|++++
T Consensus       271 ~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          271 LLKEGHRM---------------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCC---------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            55443111                           1123458999999999999999999999999874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.2e-47  Score=361.60  Aligned_cols=262  Identities=19%  Similarity=0.266  Sum_probs=211.3

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEE-----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEee
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAI-----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA   79 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~-----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~   79 (397)
                      ++.....++|.+.+.||+|+||+||+|+     +..++..||||++..... ......+.+|+.+++.++||||++++++
T Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~  101 (327)
T 2yfx_A           23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGV  101 (327)
T ss_dssp             GSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc-hhhHHHHHHHHHHHhhCCCCCCCeEEEE
Confidence            4556678999999999999999999998     566788999999864322 2233467789999999999999999999


Q ss_pred             eecCCeEEEEEEccc-cCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---Cc
Q 015948           80 FPHKGNLHLVFEFME-TDLETVIRNTN------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQ  149 (397)
Q Consensus        80 ~~~~~~~~lv~e~~~-g~L~~~~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~  149 (397)
                      +.+.+..|+||||++ |+|.+++....      ..+++..++.++.||+.||.|||++||+||||||+||||+.+   +.
T Consensus       102 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~  181 (327)
T 2yfx_A          102 SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV  181 (327)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred             EcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcce
Confidence            999999999999996 68999888754      348999999999999999999999999999999999999854   45


Q ss_pred             EEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHH
Q 015948          150 LKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA  226 (397)
Q Consensus       150 ~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~  226 (397)
                      +||+|||++.......  .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+..
T Consensus       182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  260 (327)
T 2yfx_A          182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS  260 (327)
T ss_dssp             EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT
T ss_pred             EEECccccccccccccccccCCCcCCCcceeCHhHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc
Confidence            9999999997653322  22334567888999999976 568999999999999999998 9999998877666655543


Q ss_pred             HhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                      ....                           .....++..+.+||.+||+.||.+||++.++++|.|+.
T Consensus       261 ~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          261 GGRM---------------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             TCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCC---------------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            2110                           11234588999999999999999999999999998864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=5.5e-47  Score=347.11  Aligned_cols=248  Identities=26%  Similarity=0.398  Sum_probs=194.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC--CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE--GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .++|.+.+.||+|+||+||+|.+.  |+.||||++.......  .....+.+|+.+++.++||||+++++++.+++..|+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            578999999999999999999875  7899999987654322  233467789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC---ccccCCCCCcEEEcc--------CCcEEEeeec
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW---VLHRDMKPNNLLIGS--------HGQLKLADFG  156 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~---ivHrDlkp~NILl~~--------~~~~kl~DFG  156 (397)
                      ||||++ |+|..++..  ..+++..++.++.||+.||.|||++|   |+||||||+|||++.        ++.+||+|||
T Consensus        84 v~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           84 VMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             EEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             EEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            999998 567666643  35999999999999999999999999   899999999999986        6789999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ++.......  .....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+......      
T Consensus       162 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------  232 (271)
T 3dtc_A          162 LAREWHRTT--KMSAAGAYAWMAPEVIRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA------  232 (271)
T ss_dssp             C---------------CCGGGSCHHHHHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCC------
T ss_pred             ccccccccc--ccCCCCccceeCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCC------
Confidence            998764432  234578899999999976 56899999999999999999999999988776655544321100      


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                          ......+++.+.+||.+||+.||.+|||+.|++++
T Consensus       233 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          233 --------------------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             --------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                                11223458999999999999999999999999874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.4e-47  Score=366.48  Aligned_cols=261  Identities=13%  Similarity=0.132  Sum_probs=200.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccC---------CccchHHHHHHHHHhcCCCCeeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKE---------GVNFTALREIKLLKELKSPHIIEL   76 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~---------~~~~~~~~E~~~l~~l~hp~iv~l   76 (397)
                      .++|++.+.||+|+||+||+|.+..+     ++.||||++.......         ........|+..++.++||||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            45999999999999999999998765     5889999987543210         011123346666777789999999


Q ss_pred             EeeeecC----CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc--cCCcE
Q 015948           77 IDAFPHK----GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG--SHGQL  150 (397)
Q Consensus        77 ~~~~~~~----~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~--~~~~~  150 (397)
                      ++++...    .+.|+|||||+|+|.+++......+++..++.++.||+.||+|||++||+||||||+||||+  .++.+
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~  193 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV  193 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCE
T ss_pred             EeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeE
Confidence            9998664    56899999998899999988767799999999999999999999999999999999999999  88999


Q ss_pred             EEeeeccceeeCCCCC-------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHH
Q 015948          151 KLADFGLARIFGSPDR-------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLG  222 (397)
Q Consensus       151 kl~DFG~a~~~~~~~~-------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~  222 (397)
                      ||+|||+++.+.....       .....+||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.. +.....
T Consensus       194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~  272 (364)
T 3op5_A          194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG-VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR  272 (364)
T ss_dssp             EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred             EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence            9999999987643221       1234558999999999977 558999999999999999999999998643 332222


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .........          +........        ....++.++.+||..||..||.+||++.++++
T Consensus       273 ~~~~~~~~~----------~~~~~~~~~--------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          273 DSKIRYREN----------IASLMDKCF--------PAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHC----------HHHHHHHHS--------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhhhh----------HHHHHHHhc--------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            221110000          000000000        01355899999999999999999999999875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=5.9e-47  Score=346.49  Aligned_cols=248  Identities=16%  Similarity=0.202  Sum_probs=208.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLH   87 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~   87 (397)
                      -.++|.+.+.||+|+||+||+|++.  +..||+|++............+.+|+.+++.++||||+++++++.+.  +.+|
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT   85 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence            4688999999999999999999885  88999999987654444445678999999999999999999999877  7899


Q ss_pred             EEEEccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           88 LVFEFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      +||||++ |+|.+++..... .+++..++.++.||+.||.|||++|  |+||||||+|||++.++.++|+|||++.....
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~  165 (271)
T 3kmu_A           86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS  165 (271)
T ss_dssp             EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred             eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence            9999998 589998887543 5899999999999999999999999  99999999999999999999999998764322


Q ss_pred             CCCcccccccCceeeChhcccCccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQ--YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~--~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                           ....+|+.|+|||++.+...  ++.++|||||||++|+|++|..||.+.+..+....+......           
T Consensus       166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-----------  229 (271)
T 3kmu_A          166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR-----------  229 (271)
T ss_dssp             -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCC-----------
T ss_pred             -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCC-----------
Confidence                 34567889999999976322  333799999999999999999999988877766655442111           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                     ......+++++.+||.+||+.||.+|||++++++
T Consensus       230 ---------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          230 ---------------PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             ---------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                           0122356899999999999999999999999986

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.6e-47  Score=357.06  Aligned_cols=252  Identities=20%  Similarity=0.328  Sum_probs=203.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .++|.+.+.||+|+||+||+|.+..++    ..||||++..... ......+.+|+.+++.++||||+++++++.+.+.+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  121 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM  121 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence            578999999999999999999886553    3599999875432 22334577899999999999999999999999999


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||++| +|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       122 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  201 (333)
T 1mqb_A          122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  201 (333)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence            999999985 8999888777779999999999999999999999999999999999999999999999999998765432


Q ss_pred             C---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 R---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .   ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+......           
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~-----------  269 (333)
T 1mqb_A          202 EATYTTSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL-----------  269 (333)
T ss_dssp             ---------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-----------
T ss_pred             ccccccCCCCccccccCchhccc-CCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcC-----------
Confidence            2   1222345677999999976 568999999999999999998 99999888777666655432111           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                      .....++..+.+||.+||+.||.+||++.+++++
T Consensus       270 ----------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          270 ----------------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             ----------------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ----------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                            1112457899999999999999999999998864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=6.4e-47  Score=350.63  Aligned_cols=250  Identities=20%  Similarity=0.316  Sum_probs=204.6

Q ss_pred             hcceeeee-eeeecCcEEEEEEE--ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKRE-VLGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~-~LG~G~~g~Vy~a~--~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|.+.+ .||+|+||+||+|.  +..+++.||||++............+.+|+.+++.++||||+++++++ ..+.+|
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            57899998 99999999999995  456778999999976544444455678999999999999999999999 567789


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||+. |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        94 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN  172 (291)
T ss_dssp             EEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred             EEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence            9999998 5888888764 4599999999999999999999999999999999999999999999999999987754432


Q ss_pred             c---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 R---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .   .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+.....             
T Consensus       173 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------------  238 (291)
T 1xbb_A          173 YYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER-------------  238 (291)
T ss_dssp             EEEC----CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-------------
T ss_pred             cccccccCCCCceeeChHHhcc-CCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------
Confidence            2   222345677999999976 458899999999999999999 9999998877665555433210             


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    ......+++++.+||.+||+.||.+||++.++++
T Consensus       239 --------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          239 --------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             --------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                          0112356899999999999999999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-46  Score=348.61  Aligned_cols=253  Identities=21%  Similarity=0.331  Sum_probs=209.7

Q ss_pred             hcceeeee-eeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKRE-VLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~-~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|.+.+ .||+|+||+||+|.+.  .++..||+|++..... ......+.+|+.+++.++||||+++++++ ..+.+|
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~   85 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM   85 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc-hhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence            56777776 9999999999999864  4678899999875432 22344577899999999999999999999 456799


Q ss_pred             EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||++| +|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  165 (287)
T 1u59_A           86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  165 (287)
T ss_dssp             EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             EEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence            99999984 88888877667799999999999999999999999999999999999999999999999999988754332


Q ss_pred             c---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 R---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                      .   .....+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+.....             
T Consensus       166 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~-------------  231 (287)
T 1u59_A          166 YYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR-------------  231 (287)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCC-------------
T ss_pred             eeeccccccccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCc-------------
Confidence            2   223345788999999975 568999999999999999998 9999998887776655543210             


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                                    ....+.+++++.+||.+||..||.+||++.+++++.+
T Consensus       232 --------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          232 --------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             --------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             --------------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence                          0122356899999999999999999999999998643

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.7e-47  Score=359.90  Aligned_cols=254  Identities=26%  Similarity=0.335  Sum_probs=198.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----eE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----NL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----~~   86 (397)
                      .++|++.+.||+|+||+||+|++.  ++.||||++....   .......+|+.+|++++||||+++++++....    .+
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   97 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL   97 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence            578999999999999999999875  7899999986432   22234556999999999999999999997744    47


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC----------CccccCCCCCcEEEccCCcEEEeee
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK----------WVLHRDMKPNNLLIGSHGQLKLADF  155 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~----------~ivHrDlkp~NILl~~~~~~kl~DF  155 (397)
                      |+|||||+ |+|.+++....  +++..++.++.||+.||.|||++          ||+||||||+|||++.++.+||+||
T Consensus        98 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF  175 (322)
T 3soc_A           98 WLITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF  175 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence            99999998 58988887644  89999999999999999999999          9999999999999999999999999


Q ss_pred             ccceeeCCCCC--cccccccCceeeChhcccCc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH---------
Q 015948          156 GLARIFGSPDR--RFTHQVFARWYRAPELLFGA----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ---------  220 (397)
Q Consensus       156 G~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~---------  220 (397)
                      |+++.......  ......||+.|+|||++.+.    ..++.++|||||||++|||++|++||.+..+...         
T Consensus       176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~  255 (322)
T 3soc_A          176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ  255 (322)
T ss_dssp             TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred             CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence            99987754332  23346789999999999763    3456788999999999999999999986543110         


Q ss_pred             ---HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCC--CCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          221 ---LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP--SASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       221 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                         ...+........                   ..+.....+.  ..+.++.+||.+||+.||++|||+.|+++
T Consensus       256 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          256 HPSLEDMQEVVVHKK-------------------KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             SCCHHHHHHHHTTSC-------------------CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCchhhhhhhhhccc-------------------CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence               011111100000                   0011111111  12456999999999999999999999986

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=4.5e-47  Score=357.56  Aligned_cols=254  Identities=25%  Similarity=0.351  Sum_probs=207.6

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEE--EEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTV--AIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~--aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      ..-.++|.+.+.||+|+||.||+|++..++..+  |+|.+..... ......+.+|+.+++++ +||||+++++++.+.+
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~   99 (327)
T 1fvr_A           21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   99 (327)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred             cccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence            344689999999999999999999999888865  9998875332 23345678999999999 8999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG  148 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~  148 (397)
                      .+|+||||++ |+|.+++....               ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  179 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence            9999999997 58998887653               3699999999999999999999999999999999999999999


Q ss_pred             cEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948          149 QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA  227 (397)
Q Consensus       149 ~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~  227 (397)
                      .+||+|||+++.... ........+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+...
T Consensus       180 ~~kL~Dfg~~~~~~~-~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~  257 (327)
T 1fvr_A          180 VAKIADFGLSRGQEV-YVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  257 (327)
T ss_dssp             CEEECCTTCEESSCE-ECCC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred             eEEEcccCcCccccc-cccccCCCCCccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC
Confidence            999999999974322 112233455777999999976 568999999999999999998 99999988776655544322


Q ss_pred             hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ...                           .....+++++.+||.+||..||.+|||+++++++
T Consensus       258 ~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          258 YRL---------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             CCC---------------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCC---------------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            100                           1123458999999999999999999999999875

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=5.3e-47  Score=354.74  Aligned_cols=253  Identities=21%  Similarity=0.298  Sum_probs=199.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC---CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC---
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG---   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---   84 (397)
                      .++|.+.+.||+|+||+||+|.+..   ++..||+|++............+.+|+.+++.++||||+++++++.+.+   
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            6889999999999999999998765   4568999998765444444456789999999999999999999987654   


Q ss_pred             --eEEEEEEccc-cCHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948           85 --NLHLVFEFME-TDLETVIRN-----TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        85 --~~~lv~e~~~-g~L~~~~~~-----~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                        ..|+||||++ |+|..++..     ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg  192 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFG  192 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecC
Confidence              4599999998 588888753     33569999999999999999999999999999999999999999999999999


Q ss_pred             cceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948          157 LARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATP  233 (397)
Q Consensus       157 ~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~  233 (397)
                      +++......  .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.........+......   
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---  268 (313)
T 3brb_A          193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL---  268 (313)
T ss_dssp             CC----------------CCGGGSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---
T ss_pred             cceecccccccCcccccCCCccccCchhhcC-CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC---
Confidence            998764432  22233456778999999976 568999999999999999999 89999988776666555432110   


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                              .....+++++.+||.+||..||.+|||+.+++++
T Consensus       269 ------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          269 ------------------------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             ------------------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ------------------------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                    1123458999999999999999999999999864

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=8.4e-47  Score=347.95  Aligned_cols=252  Identities=21%  Similarity=0.316  Sum_probs=205.6

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECC---CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ..++|.+.+.||+|+||+||+|++..   ++..||+|.+..... ......+.+|+.+++.++||||+++++++.++ ..
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~   87 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PT   87 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC-HHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SC
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC-chHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CC
Confidence            46889999999999999999998654   334699999875432 22345677899999999999999999998654 56


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||+. |+|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        88 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           88 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred             EEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence            89999998 68999888777779999999999999999999999999999999999999999999999999998764432


Q ss_pred             C-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 R-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||......+....+......             
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~-------------  233 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINF-RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL-------------  233 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCC-------------
T ss_pred             ccccccCCCCcceeCchhhcc-CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCC-------------
Confidence            2 2233456778999999975 568999999999999999998 99999877766665555442111             


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                    .....+++.+.+||.+||..||.+|||+.|++++
T Consensus       234 --------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          234 --------------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             --------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                          1112358899999999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.5e-46  Score=370.81  Aligned_cols=255  Identities=19%  Similarity=0.232  Sum_probs=211.2

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~   86 (397)
                      ..+.++|++.+.||+|+||.||+|++..+++.||||++.....    ...+.+|+.+++.|+| ++|..+..++...+..
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~   78 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYN   78 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence            4578999999999999999999999999999999998765433    2357789999999987 5666666677788899


Q ss_pred             EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE---ccCCcEEEeeeccceeeCC
Q 015948           87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI---GSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl---~~~~~~kl~DFG~a~~~~~  163 (397)
                      |+||||++++|.+++......+++..++.|+.||+.||.|||++||+||||||+||||   +.++.+||+|||+++.+..
T Consensus        79 ~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~  158 (483)
T 3sv0_A           79 VLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD  158 (483)
T ss_dssp             EEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             EEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence            9999999889999998777779999999999999999999999999999999999999   6889999999999988754


Q ss_pred             CCC-------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHHHhCCCCC
Q 015948          164 PDR-------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---IDQLGKIFAAFGTATP  233 (397)
Q Consensus       164 ~~~-------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~~  233 (397)
                      ...       .....+||..|+|||++.+ ..++.++|||||||+||||++|..||.+...   ...+..+.....    
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~----  233 (483)
T 3sv0_A          159 TSTHQHIPYRENKNLTGTARYASVNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV----  233 (483)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH----
T ss_pred             CccccccccccccccCCCccccCHHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc----
Confidence            432       2235678999999999977 5689999999999999999999999987654   233333322100    


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                         ......+...++.++.+||.+||..||++||++++|++
T Consensus       234 -------------------~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          234 -------------------ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             -------------------HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -------------------cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                               01112233456899999999999999999999988764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=3.5e-47  Score=358.99  Aligned_cols=251  Identities=24%  Similarity=0.392  Sum_probs=188.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeee--------e
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAF--------P   81 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~--------~   81 (397)
                      ..+|++.+.||+|+||+||+|++..+++.||||++....  ......+.+|+.+++++. ||||+++++++        .
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            468999999999999999999999999999999986442  222345778999999996 99999999998        4


Q ss_pred             cCCeEEEEEEccccCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEeeecc
Q 015948           82 HKGNLHLVFEFMETDLETVIRN--TNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        82 ~~~~~~lv~e~~~g~L~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                      ....+|+||||++|+|.+++..  ....+++..++.++.||+.||.|||++|  |+||||||+||||+.++.+||+|||+
T Consensus       105 ~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          105 GQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             SSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             CCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence            4556899999999999998865  3456999999999999999999999999  99999999999999999999999999


Q ss_pred             ceeeCCCCC------------cccccccCceeeChhccc--CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015948          158 ARIFGSPDR------------RFTHQVFARWYRAPELLF--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGK  223 (397)
Q Consensus       158 a~~~~~~~~------------~~~~~~~t~~y~aPE~l~--~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  223 (397)
                      ++.......            ......+|+.|+|||++.  ....++.++|||||||++|+|++|..||.+.........
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~  264 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG  264 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC
Confidence            987644321            112455888999999983  235688999999999999999999999976544322111


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                      .   ..                           .......+..+.+||.+||+.||.+|||+.|+++|-+
T Consensus       265 ~---~~---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          265 K---YS---------------------------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             ----CC---------------------------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             c---cc---------------------------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            0   00                           0011234678999999999999999999999998743

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.5e-47  Score=362.14  Aligned_cols=260  Identities=16%  Similarity=0.153  Sum_probs=200.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECC---CCcEEEEEEeecCCccC---------CccchHHHHHHHHHhcCCCCeeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKE---------GVNFTALREIKLLKELKSPHIIEL   76 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~---------~~~~~~~~E~~~l~~l~hp~iv~l   76 (397)
                      ...++|.+.+.||+|+||+||+|++..   ++..+|+|++.......         .....+.+|+.+++.++||||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            345799999999999999999999987   78899999987653210         012235678899999999999999


Q ss_pred             Eeeeec----CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC--cE
Q 015948           77 IDAFPH----KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG--QL  150 (397)
Q Consensus        77 ~~~~~~----~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~--~~  150 (397)
                      ++++..    ...+|+|||||+++|.+++.... .+++..++.++.||+.||+|||++||+||||||+||||+.++  .+
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~  192 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQV  192 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSE
T ss_pred             ecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcE
Confidence            999877    78899999999778888887654 699999999999999999999999999999999999999887  99


Q ss_pred             EEeeeccceeeCCCC-------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHH
Q 015948          151 KLADFGLARIFGSPD-------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLG  222 (397)
Q Consensus       151 kl~DFG~a~~~~~~~-------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~  222 (397)
                      ||+|||+++.+....       .......||+.|+|||++.+ ..++.++|||||||++|||++|..||.+. .+.....
T Consensus       193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~  271 (345)
T 2v62_A          193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG-VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ  271 (345)
T ss_dssp             EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred             EEEeCCCceecccccccccchhccccccCCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence            999999998763221       12245678999999999987 56899999999999999999999999653 3333333


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCC--CCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP--SASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ..........+.                    ......+  .++.++.+||.+||..||.+||+++++++
T Consensus       272 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          272 TAKTNLLDELPQ--------------------SVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHHHTTTH--------------------HHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhhcccccH--------------------HHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            222221111000                    0011111  56899999999999999999999999987

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.2e-46  Score=349.68  Aligned_cols=251  Identities=22%  Similarity=0.301  Sum_probs=203.5

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC---cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee-ecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG---QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF-PHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-~~~~~~   86 (397)
                      ..+|.+.+.||+|+||+||+|++..++   ..+|+|.+..... ......+.+|+.++++++||||+++++++ ..++..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC-HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            567999999999999999999875443   3689998865322 22234577899999999999999999984 566789


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||++| +|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  182 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  182 (298)
T ss_dssp             EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred             EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence            999999985 8999998777779999999999999999999999999999999999999999999999999998764322


Q ss_pred             ----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          166 ----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       166 ----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                          .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.......         
T Consensus       183 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  252 (298)
T 3f66_A          183 YYSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL---------  252 (298)
T ss_dssp             GCBC-----CCBCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC---------
T ss_pred             hhccccccCCCCCccccChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCC---------
Confidence                12334456778999999976 568999999999999999999 778888777666555554321111         


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                        ....+++.+.+||.+||+.||.+|||+.|+++
T Consensus       253 ------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          253 ------------------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             ------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                              11234789999999999999999999999886

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.1e-46  Score=355.74  Aligned_cols=253  Identities=23%  Similarity=0.336  Sum_probs=209.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCc-----EEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .++|.+.+.||+|+||+||+|.+..++.     .||+|.+..... ......+.+|+.+++.+ +||||+++++++.+.+
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-ADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC-hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            5789999999999999999999977664     799999865432 12234577999999999 8999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948           85 NLHLVFEFME-TDLETVIRNT-------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL  150 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~-------------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~  150 (397)
                      .+|+||||++ |+|.+++...             ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~  203 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA  203 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEE
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeE
Confidence            9999999998 5898888653             3458999999999999999999999999999999999999999999


Q ss_pred             EEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948          151 KLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA  227 (397)
Q Consensus       151 kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~  227 (397)
                      ||+|||+++.......  ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+......+..+...
T Consensus       204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  282 (333)
T 2i1m_A          204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD  282 (333)
T ss_dssp             EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHH
T ss_pred             EECccccccccccccceeecCCCCCCccccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhc
Confidence            9999999987643322  2234456778999999876 568999999999999999998 99999887765555555443


Q ss_pred             hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      ....                          ......+..+.+||.+||+.||.+|||+.|++++
T Consensus       283 ~~~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          283 GYQM--------------------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             TCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCC--------------------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            1110                          0112347899999999999999999999999863

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-46  Score=348.66  Aligned_cols=250  Identities=24%  Similarity=0.321  Sum_probs=203.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE-E
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL-H   87 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~-~   87 (397)
                      -.|.+.+.||+|+||+||+|.+..++.   .||+|.+..... ......+.+|+.+++.++||||+++++++.+.+.. |
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   99 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH   99 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence            356777999999999999999765554   799999864322 22334677899999999999999999999776654 9


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-  165 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-  165 (397)
                      +||||+. |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... 
T Consensus       100 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          100 VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             EEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             EEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence            9999997 78999998877779999999999999999999999999999999999999999999999999998653321 


Q ss_pred             ---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                         .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+......           
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-----------  247 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQT-YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL-----------  247 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTT-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCC-----------
T ss_pred             cccccCcCCCCCccccChhhhcc-CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCC-----------
Confidence               22334566788999999976 568999999999999999999 56777766665555444332111           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                      .....+++.+.+||.+||+.||.+|||+.++++
T Consensus       248 ----------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          248 ----------------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             ----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                            112245789999999999999999999999876

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=6.6e-47  Score=348.69  Aligned_cols=251  Identities=25%  Similarity=0.380  Sum_probs=209.9

Q ss_pred             ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--
Q 015948            5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--   82 (397)
Q Consensus         5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--   82 (397)
                      .+...+.++|.+.+.||+|+||.||+|++..+|+.||+|++....      ..+.+|+.+++.++||||+++++++..  
T Consensus         4 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   77 (284)
T 2a19_B            4 TVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFD   77 (284)
T ss_dssp             CCCHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEE
T ss_pred             cccchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccc
Confidence            456778999999999999999999999999999999999987542      246689999999999999999998854  


Q ss_pred             --------------CCeEEEEEEcccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           83 --------------KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        83 --------------~~~~~lv~e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                                    ...+|+||||++| +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  157 (284)
T 2a19_B           78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD  157 (284)
T ss_dssp             EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC
Confidence                          4568999999995 899888754 356999999999999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA  226 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~  226 (397)
                      ++.+||+|||++....... ......+++.|+|||++.+ ..++.++|||||||++|+|++|..+|....  .....+..
T Consensus       158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~~  233 (284)
T 2a19_B          158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAFETS--KFFTDLRD  233 (284)
T ss_dssp             TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHC-SCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--HHHHHHHT
T ss_pred             CCCEEECcchhheeccccc-cccccCCcccccChhhhcc-CCCcchhhhHHHHHHHHHHHhcCCcchhHH--HHHHHhhc
Confidence            9999999999998775433 3345568899999999976 568999999999999999999988764221  11111110


Q ss_pred             HhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                          .                          .+...++..+.+||.+||..||.+|||+.|+++|.|.-
T Consensus       234 ----~--------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          234 ----G--------------------------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             ----T--------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----c--------------------------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                0                          01123578999999999999999999999999997753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=5.9e-47  Score=376.17  Aligned_cols=249  Identities=22%  Similarity=0.346  Sum_probs=211.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|.+.+.||+|+||+||+|++..++..||||++....   .....+.+|+.+|++++||||+++++++.+.+.+|+||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~  295 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT  295 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence            578999999999999999999999989999999986532   23456889999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-c
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~  167 (397)
                      |||. |+|.+++... ...+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....... .
T Consensus       296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  375 (495)
T 1opk_A          296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  375 (495)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred             EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence            9998 6999998864 34589999999999999999999999999999999999999999999999999987643322 1


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+....+......                
T Consensus       376 ~~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------  438 (495)
T 1opk_A          376 HAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM----------------  438 (495)
T ss_dssp             CTTCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----------------
T ss_pred             cCCCcCCcceeCHhHHhc-CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence            223345677999999976 568999999999999999998 99999988766655544332111                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 .....+++++.+||.+||+.||.+|||+.++++
T Consensus       439 -----------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          439 -----------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                       112345899999999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.8e-47  Score=360.09  Aligned_cols=254  Identities=14%  Similarity=0.139  Sum_probs=203.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCC--------CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeE-------
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKT--------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-------   75 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~--------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~-------   75 (397)
                      .++|++.+.||+|+||+||+|++..+        ++.||||++...       ..+.+|+.++++++||||++       
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence            57999999999999999999999874        889999998743       35779999999999999987       


Q ss_pred             --------EEeeeec-CCeEEEEEEccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc
Q 015948           76 --------LIDAFPH-KGNLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG  145 (397)
Q Consensus        76 --------l~~~~~~-~~~~~lv~e~~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~  145 (397)
                              +++++.. ++.+|+||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~  193 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD  193 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE
T ss_pred             CCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc
Confidence                    5556654 7889999999988999999875 35699999999999999999999999999999999999999


Q ss_pred             cCC--cEEEeeeccceeeCCCCC-------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 015948          146 SHG--QLKLADFGLARIFGSPDR-------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS  216 (397)
Q Consensus       146 ~~~--~~kl~DFG~a~~~~~~~~-------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  216 (397)
                      .++  .+||+|||+++.+.....       ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+..
T Consensus       194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG-CGPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            998  899999999987643221       2234578999999999976 568999999999999999999999998764


Q ss_pred             -cHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          217 -DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       217 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                       ....+......+...... +..                 ....+..++.++.+||.+||..||.+|||++++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~-~~~-----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          273 PNTEDIMKQKQKFVDKPGP-FVG-----------------PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             TCHHHHHHHHHHHHHSCCC-EEC-----------------TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cCHHHHHHHHHhccCChhh-hhh-----------------hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence             444444433322111100 000                 00111245899999999999999999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=3.3e-46  Score=366.68  Aligned_cols=243  Identities=20%  Similarity=0.311  Sum_probs=203.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-eEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-NLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-~~~lv   89 (397)
                      .++|.+.+.||+|+||+||+|.+.  |+.||||+++...    ....+.+|+.+|++++||||+++++++.... .+|+|
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence            578999999999999999999875  7799999986532    3456889999999999999999999976554 79999


Q ss_pred             EEccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||. |+|.+++.+.+. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......  
T Consensus       266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--  343 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  343 (450)
T ss_dssp             EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence            99998 599999887644 37999999999999999999999999999999999999999999999999998653322  


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                       ....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+......                
T Consensus       344 -~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~----------------  405 (450)
T 1k9a_A          344 -DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM----------------  405 (450)
T ss_dssp             ----CCCTTTSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC----------------
T ss_pred             -cCCCCCcceeCHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence             22356778999999976 568999999999999999998 99999988776666555432111                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 .....+++++.+||.+||+.||.+|||+.++++
T Consensus       406 -----------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          406 -----------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                       112345899999999999999999999999875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1e-46  Score=353.00  Aligned_cols=254  Identities=24%  Similarity=0.373  Sum_probs=207.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~   83 (397)
                      ..++|++.+.||+|+||+||+|++     ..+++.||||++..... ......+.+|+.+++.+ +||||+++++++...
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  103 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKP  103 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence            368999999999999999999985     45678999999875432 22234577899999999 689999999998765


Q ss_pred             C-eEEEEEEccc-cCHHHHHHhcCCC---------------CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           84 G-NLHLVFEFME-TDLETVIRNTNIF---------------LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        84 ~-~~~lv~e~~~-g~L~~~~~~~~~~---------------l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                      + .+|+||||++ |+|.+++......               +++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~  183 (316)
T 2xir_A          104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE  183 (316)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC
Confidence            4 5999999998 5898888765432               889999999999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK  223 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~  223 (397)
                      ++.+||+|||+++.......  ......+|+.|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+.+..
T Consensus       184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~  262 (316)
T 2xir_A          184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  262 (316)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred             CCCEEECCCccccccccCccceeccCCCcceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHH
Confidence            99999999999987644322  2334556888999999976 568999999999999999998 9999988765444433


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .+......                          .....+++++.++|.+||+.||.+|||+.|+++|
T Consensus       263 ~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          263 RLKEGTRM--------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhccCccC--------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            33321110                          1112358899999999999999999999999875

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=4.3e-47  Score=357.38  Aligned_cols=267  Identities=19%  Similarity=0.257  Sum_probs=205.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|.+.+.||+|+||+||+|++ .+|+.||||++....... ....+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv  105 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV  105 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEE
T ss_pred             HhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEEEecCCceEEE
Confidence            578999999999999999999974 468999999987654322 233678999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhHhC---CccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           90 FEFME-TDLETVIRNTN---IFLSPADIKSYMQMTLKGLAFCHKK---WVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~---~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      |||+. |+|.+.+....   ..+++..++.++.||+.||.|||++   ||+||||||+|||++.++.+||+|||+++...
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  185 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD  185 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence            99998 58888887643   3499999999999999999999999   99999999999999999999999999998775


Q ss_pred             CCCC-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC-----CcHHHHHHHHHHhCCCCCCCC
Q 015948          163 SPDR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-----SDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       163 ~~~~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      .... ......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||...     ........+............
T Consensus       186 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (326)
T 3uim_A          186 YKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEAL  264 (326)
T ss_dssp             SSSSCEECCCCSCGGGCCHHHHHH-SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTS
T ss_pred             cccccccccccCCcCccCHHHhcc-CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhh
Confidence            4333 2344558999999999976 45899999999999999999999999521     111111111110000000000


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY  293 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  293 (397)
                      .+              ........+..+..+.+|+.+||+.||.+|||+.|+++|-+
T Consensus       265 ~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          265 VD--------------VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             SC--------------TTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             cC--------------hhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            00              00000111223578999999999999999999999998754

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=9.7e-47  Score=355.28  Aligned_cols=255  Identities=22%  Similarity=0.312  Sum_probs=206.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~   84 (397)
                      .++|++.+.||+|+||+||+|+    +..+++.||||++....  ......+.+|+.+++.++||||+++++++.  +..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   99 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ   99 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence            5899999999999999999998    56788999999986542  222345779999999999999999999875  567


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      .+|+||||++ |+|.+++......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             eEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence            7999999996 689888877666699999999999999999999999999999999999999999999999999988754


Q ss_pred             CCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHH-----------HHHHHHhC
Q 015948          164 PDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL-----------GKIFAAFG  229 (397)
Q Consensus       164 ~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~-----------~~i~~~~~  229 (397)
                      ...   ......++..|+|||++.+ ..++.++|||||||++|+|++|..||.........           ..+.....
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE  258 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred             CCccceeeccCCccccccCHHHhcc-CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence            432   2234457788999999976 55899999999999999999999998654322110           11111100


Q ss_pred             CCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                             ........+.+++++.+||.+||+.||.+|||+.|++++
T Consensus       259 -----------------------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          259 -----------------------EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             -----------------------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------------cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                   000112234568999999999999999999999999653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.1e-46  Score=368.56  Aligned_cols=248  Identities=21%  Similarity=0.343  Sum_probs=208.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      -.++|.+.+.||+|+||+||+|.+. ++..||||++....   .....+.+|+.+|+.++||||+++++++. .+.+|+|
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv  260 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII  260 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence            3678999999999999999999986 46789999987543   23456889999999999999999999986 6678999


Q ss_pred             EEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           90 FEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      ||||. |+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++....... 
T Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence            99998 68999887542 3588999999999999999999999999999999999999999999999999987643221 


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+.+..+........             
T Consensus       341 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~-------------  406 (454)
T 1qcf_A          341 AREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-------------  406 (454)
T ss_dssp             TTCSSSSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC-------------
T ss_pred             ccCCCcccccccCHHHhcc-CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------
Confidence            1223345677999999975 568999999999999999999 9999999888877777655422111             


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    ...+++++.+||.+||..||++|||++++++
T Consensus       407 --------------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          407 --------------PENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             --------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence                          1245889999999999999999999999875

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.9e-46  Score=345.90  Aligned_cols=255  Identities=25%  Similarity=0.358  Sum_probs=196.9

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHh--cCCCCeeEEEeeeec--
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE--LKSPHIIELIDAFPH--   82 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~--l~hp~iv~l~~~~~~--   82 (397)
                      ...+.++|++.+.||+|+||+||+|++  +|+.||||++...     ....+.+|.+++..  ++||||+++++++..  
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~   75 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSR   75 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeecccc
Confidence            345789999999999999999999987  6899999998643     22345567777777  799999999998543  


Q ss_pred             --CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH--------hCCccccCCCCCcEEEccCCcEE
Q 015948           83 --KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH--------KKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        83 --~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH--------~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                        ...+|+||||++ |+|.+++...  .+++..+..++.||+.||+|||        ++||+||||||+|||++.++.+|
T Consensus        76 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k  153 (301)
T 3q4u_A           76 HSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC  153 (301)
T ss_dssp             TTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred             CCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence              457899999998 5888888543  4999999999999999999999        99999999999999999999999


Q ss_pred             EeeeccceeeCCCCCc----ccccccCceeeChhcccCcc-----CCCCcchHHHHHHHHHHHHhC----------CCCC
Q 015948          152 LADFGLARIFGSPDRR----FTHQVFARWYRAPELLFGAK-----QYGAGVDVWAAGCIFAELLNR----------RPFL  212 (397)
Q Consensus       152 l~DFG~a~~~~~~~~~----~~~~~~t~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~ell~g----------~~pf  212 (397)
                      |+|||+++........    .....||+.|+|||++.+..     .++.++|||||||++|||++|          .+||
T Consensus       154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf  233 (301)
T 3q4u_A          154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF  233 (301)
T ss_dssp             ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence            9999999876544332    23347899999999997643     244789999999999999999          7787


Q ss_pred             CCCC----cHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHH
Q 015948          213 QGSS----DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA  288 (397)
Q Consensus       213 ~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~  288 (397)
                      ....    ....+..+......  ....+                  ........+.++.+||.+||+.||++|||++|+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i  293 (301)
T 3q4u_A          234 YDVVPNDPSFEDMRKVVCVDQQ--RPNIP------------------NRWFSDPTLTSLAKLMKECWYQNPSARLTALRI  293 (301)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCC--CCCCC------------------GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             cccCCCCcchhhhhHHHhccCC--CCCCC------------------hhhccCccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence            5532    22222222211110  00000                  000111235789999999999999999999999


Q ss_pred             hc
Q 015948          289 LE  290 (397)
Q Consensus       289 l~  290 (397)
                      ++
T Consensus       294 ~~  295 (301)
T 3q4u_A          294 KK  295 (301)
T ss_dssp             HH
T ss_pred             HH
Confidence            86

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=6.1e-46  Score=341.76  Aligned_cols=248  Identities=21%  Similarity=0.352  Sum_probs=205.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|.+.+.||+|+||+||+|.+. ++..||+|++.....   ....+.+|+.+++.++||||+++++++. .+..|+|
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v   85 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII   85 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEE
Confidence            3689999999999999999999975 567899999865432   2346789999999999999999999986 4568999


Q ss_pred             EEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||+. |+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence            99997 68888876532 25899999999999999999999999999999999999999999999999999877543322


Q ss_pred             -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                       .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+......               
T Consensus       166 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------------  229 (279)
T 1qpc_A          166 AREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---------------  229 (279)
T ss_dssp             CCTTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---------------
T ss_pred             cccCCCCccCccChhhhcc-CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---------------
Confidence             223445677999999975 568899999999999999999 99999988877666655432110               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                  .....++.++.+||.+||..||++|||+.++++
T Consensus       230 ------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          230 ------------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------CCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                        111345899999999999999999999999876

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-46  Score=361.19  Aligned_cols=251  Identities=22%  Similarity=0.295  Sum_probs=195.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCC---cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee-ecCCeEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTG---QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF-PHKGNLH   87 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-~~~~~~~   87 (397)
                      ..|.+.+.||+|+||+||+|++..++   ..||+|.+.... .......+.+|+.++++++||||+++++++ ..++..|
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~  167 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  167 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence            45889999999999999999875433   468999886432 222344678899999999999999999985 4566889


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +||||++ |+|.+++......+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.......
T Consensus       168 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            9999998 599999987777799999999999999999999999999999999999999999999999999986643221


Q ss_pred             ----cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          167 ----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       167 ----~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                          ......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+....+......           
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~-----------  315 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-----------  315 (373)
T ss_dssp             ----------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCC-----------
T ss_pred             ccccccCCCCCcccccChHHhcC-CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCC-----------
Confidence                1233456778999999976 568999999999999999999 78899887665555444332110           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                      .....++..+.+||.+||..||++|||+.|++++
T Consensus       316 ----------------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          316 ----------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             ----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                            1112458899999999999999999999999863

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=2.6e-47  Score=358.22  Aligned_cols=264  Identities=20%  Similarity=0.282  Sum_probs=205.8

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|.+.+.||+|+||+||+|++ .+|+.||||++....  ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  113 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILI  113 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred             HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence            568999999999999999999986 468999999876542  22344678999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           90 FEFME-TDLETVIRNTN---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |||++ |+|.+++....   ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  193 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD  193 (321)
T ss_dssp             EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSS
T ss_pred             EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            99998 58877775543   348999999999999999999999999999999999999999999999999998754322


Q ss_pred             --CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHH---HHHHHhCCCCCCCCCCCC
Q 015948          166 --RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLG---KIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       166 --~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~  240 (397)
                        .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+....+...   ..............    
T Consensus       194 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  268 (321)
T 2qkw_B          194 QTHLSTVVKGTLGYIDPEYFIK-GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI----  268 (321)
T ss_dssp             CCCCBCCCEEETTTCCHHHHHH-CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS----
T ss_pred             ccccccccCCCccccCHHHhcC-CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh----
Confidence              22334568899999999976 468999999999999999999999997654321111   00111111000000    


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                ..........+..+..+.+|+.+||+.||++|||+.|++++
T Consensus       269 ----------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          269 ----------VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             ----------SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                      00000111222345789999999999999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.9e-46  Score=351.44  Aligned_cols=253  Identities=26%  Similarity=0.327  Sum_probs=200.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee----cCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP----HKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~----~~~~~   86 (397)
                      .++|++.+.||+|+||.||+|++..+|+.||||++....  ......+.+|+.+++.++||||+++++++.    .....
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            578999999999999999999999999999999986532  223345778999999999999999999986    34589


Q ss_pred             EEEEEcccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           87 HLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      |+||||+.| +|.+++..   .+..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence            999999985 88888765   35669999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCC---------cccccccCceeeChhcccCcc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCC
Q 015948          163 SPDR---------RFTHQVFARWYRAPELLFGAK--QYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGT  230 (397)
Q Consensus       163 ~~~~---------~~~~~~~t~~y~aPE~l~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~  230 (397)
                      ....         ......|++.|+|||++.+..  .++.++|||||||++|+|++|..||...... ......... . 
T Consensus       186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~-  263 (317)
T 2buj_A          186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-Q-  263 (317)
T ss_dssp             EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C-
T ss_pred             cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-c-
Confidence            2111         112345688899999986532  3688999999999999999999998531100 001111110 0 


Q ss_pred             CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .                        .....+.++.++.+||.+||+.||.+|||+.+++++
T Consensus       264 ~------------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          264 L------------------------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             --------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C------------------------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            0                        001123558999999999999999999999999986

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=8.1e-46  Score=364.15  Aligned_cols=254  Identities=23%  Similarity=0.388  Sum_probs=205.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      -.++|++.+.||+|+||+||+|.+.. +..||||++.....   ....+.+|+.+|++++||||+++++++.+ +.+|+|
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv  256 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  256 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence            36789999999999999999999875 46799999875432   23467899999999999999999999876 678999


Q ss_pred             EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      ||||. |+|.+++... +..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... 
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  336 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  336 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence            99998 5899888753 34589999999999999999999999999999999999999999999999999987643321 


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+.+..+......               
T Consensus       337 ~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---------------  400 (452)
T 1fmk_A          337 ARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------------  400 (452)
T ss_dssp             ------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---------------
T ss_pred             cccCCcccccccCHhHHhc-CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence            2223445677999999976 568999999999999999999 99999998887777666443111               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc--CCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE--HRYFSS  296 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~--hp~~~~  296 (397)
                                  ...+.+++.+.+||.+||+.||++|||++++++  ..++..
T Consensus       401 ------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          401 ------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             ------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence                        112345889999999999999999999999986  355543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=4.9e-46  Score=346.16  Aligned_cols=240  Identities=23%  Similarity=0.404  Sum_probs=191.6

Q ss_pred             hhhhcceeee-eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHH-HhcCCCCeeEEEeeeec---
Q 015948            8 KKVADRYLKR-EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLL-KELKSPHIIELIDAFPH---   82 (397)
Q Consensus         8 ~~~~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l-~~l~hp~iv~l~~~~~~---   82 (397)
                      ..+.++|.+. +.||+|+||+||+|.+..+++.||+|++..       ...+.+|+.++ +.++||||++++++|..   
T Consensus        13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~   85 (299)
T 3m2w_A           13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYA   85 (299)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             cccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence            3466778777 789999999999999999999999999853       22466899988 56699999999999876   


Q ss_pred             -CCeEEEEEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---CCcEEEeeec
Q 015948           83 -KGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFG  156 (397)
Q Consensus        83 -~~~~~lv~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~~~~kl~DFG  156 (397)
                       ...+|+||||++ |+|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg  165 (299)
T 3m2w_A           86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  165 (299)
T ss_dssp             TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred             CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence             778999999998 58999888754 36999999999999999999999999999999999999998   7889999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ++.....                       ..++.++|||||||++|+|++|.+||.+.+.......+...         
T Consensus       166 ~a~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~---------  213 (299)
T 3m2w_A          166 FAKETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR---------  213 (299)
T ss_dssp             TCEECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCS---------
T ss_pred             ccccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHH---------
Confidence            9975421                       34778999999999999999999999776543221100000         


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 ............+..+++++.+||.+||+.||.+|||++|+++||||...
T Consensus       214 -----------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          214 -----------IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             -----------SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred             -----------HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence                       00000001112224578999999999999999999999999999999763

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=8.9e-46  Score=377.31  Aligned_cols=244  Identities=21%  Similarity=0.330  Sum_probs=200.4

Q ss_pred             eeeeeecCcEEEEEEEE--CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948           17 REVLGEGTYGVVYKAID--TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~   94 (397)
                      .+.||+|+||+||+|.+  ..+++.||||+++...........+.+|+.+|+.++|||||++++++.. +.+|+|||||.
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~  452 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE  452 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence            34899999999999954  5567899999997655444445678899999999999999999999965 55899999998


Q ss_pred             -cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC---cccc
Q 015948           95 -TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR---RFTH  170 (397)
Q Consensus        95 -g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~---~~~~  170 (397)
                       |+|.+++... ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+.....   ....
T Consensus       453 ~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          453 LGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             TEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence             5788888654 4599999999999999999999999999999999999999999999999999987644332   2233


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+......                   
T Consensus       532 ~~~t~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~-------------------  591 (635)
T 4fl3_A          532 GKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM-------------------  591 (635)
T ss_dssp             ---CGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-------------------
T ss_pred             CCCceeeeChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------------
Confidence            445678999999976 568999999999999999998 99999998887766665443111                   


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                              .....+++++.+||.+||+.||++||+++++++
T Consensus       592 --------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          592 --------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             --------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                    112345899999999999999999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-45  Score=375.30  Aligned_cols=249  Identities=21%  Similarity=0.336  Sum_probs=202.9

Q ss_pred             cceeeee-eeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           12 DRYLKRE-VLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        12 ~~y~i~~-~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ++|.+.+ .||+|+||+||+|.+.  .++..||||+++... .......+.+|+.+|+.++|||||++++++.. +.+|+
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l  412 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML  412 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence            4455555 8999999999999875  355679999997653 22344568899999999999999999999976 56999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||||. |+|.+++......+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+++........
T Consensus       413 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~  492 (613)
T 2ozo_A          413 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY  492 (613)
T ss_dssp             EEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred             EEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence            999998 5888888777777999999999999999999999999999999999999999999999999999876433221


Q ss_pred             ---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          168 ---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       168 ---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                         .....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+......             
T Consensus       493 ~~~~~~~~~~~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~-------------  558 (613)
T 2ozo_A          493 YTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM-------------  558 (613)
T ss_dssp             ---------CCTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC-------------
T ss_pred             eeeccCCCCccceeCHhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-------------
Confidence               122334577999999976 569999999999999999998 99999999888777666443111             


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    ...+.+++++.+||.+||..||.+||++.++++
T Consensus       559 --------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          559 --------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             --------------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             --------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                          112345899999999999999999999999854

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.8e-46  Score=345.00  Aligned_cols=253  Identities=21%  Similarity=0.305  Sum_probs=199.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECC-CCc--EEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTK-TGQ--TVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~--~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      ..++|++.+.||+|+||+||+|++.. ++.  .||+|++...... ......+.+|+.+++.++||||+++++++.+.. 
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-   94 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-   94 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence            36899999999999999999998643 333  6899998765322 223456778999999999999999999997765 


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      .++||||+. |+|.+.+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence            889999998 6899998876667999999999999999999999999999999999999999999999999999887543


Q ss_pred             CCc---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          165 DRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       165 ~~~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      ...   .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+......          
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------  243 (291)
T 1u46_A          175 DDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER----------  243 (291)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCC----------
T ss_pred             ccchhhhccCCCCceeeCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCC----------
Confidence            321   223456778999999976 558899999999999999999 99999988877666655432100          


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                      ......++.++.++|.+||..||.+|||+.++++
T Consensus       244 ----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          244 ----------------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             ----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                            0112345899999999999999999999999987

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=8.1e-45  Score=339.27  Aligned_cols=241  Identities=28%  Similarity=0.427  Sum_probs=191.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|++.  ++.||+|++...    .....+.+|+.+|++++||||+++++++.+  ..|+||
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~   78 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM   78 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence            578999999999999999999874  788999998532    234467899999999999999999999874  478999


Q ss_pred             Eccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhHh---CCccccCCCCCcEEEccCCc-EEEeeeccceeeCC
Q 015948           91 EFME-TDLETVIRNTNI--FLSPADIKSYMQMTLKGLAFCHK---KWVLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGS  163 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~---~~ivHrDlkp~NILl~~~~~-~kl~DFG~a~~~~~  163 (397)
                      ||++ |+|.+++.....  .++...+..++.||+.||.|||+   +||+||||||+|||++.++. +||+|||++.....
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~  158 (307)
T 2eva_A           79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT  158 (307)
T ss_dssp             ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred             EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence            9998 588888876542  47899999999999999999999   89999999999999998887 79999999986543


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCCCCCCCCCCC
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID--QLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .   .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......  ....+..  +.           
T Consensus       159 ~---~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~-----------  221 (307)
T 2eva_A          159 H---MTNNKGSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN--GT-----------  221 (307)
T ss_dssp             ---------CCTTSSCHHHHTC-CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT--TC-----------
T ss_pred             c---cccCCCCCceEChhhhCC-CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc--CC-----------
Confidence            2   234568899999999976 568999999999999999999999998654322  1111111  00           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    .......++..+.+||.+||+.||.+|||++++++
T Consensus       222 --------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          222 --------------RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             --------------CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                          01122456899999999999999999999999987

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=4.2e-46  Score=349.67  Aligned_cols=255  Identities=22%  Similarity=0.318  Sum_probs=201.1

Q ss_pred             hhhcce-eeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-
Q 015948            9 KVADRY-LKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-   82 (397)
Q Consensus         9 ~~~~~y-~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-   82 (397)
                      .+.++| ++.+.||+|+||+||++.    +..+++.||||++..... ......+.+|+.+|+.++||||+++++++.+ 
T Consensus        27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (318)
T 3lxp_A           27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA  105 (318)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC-hHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence            356677 999999999999998875    345788999999875422 2233457789999999999999999999977 


Q ss_pred             -CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           83 -KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        83 -~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                       ...+|+||||++ |+|.+++....  +++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       106 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          106 GAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             TTTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CCceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence             468999999998 58888876654  89999999999999999999999999999999999999999999999999998


Q ss_pred             eCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH-----------HHHHHHH
Q 015948          161 FGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID-----------QLGKIFA  226 (397)
Q Consensus       161 ~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-----------~~~~i~~  226 (397)
                      ......   ......++..|+|||++.+ ..++.++|||||||++|+|++|..||.......           ....+..
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPECLKE-YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE  262 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred             ccccccccccccCCCCCceeeChHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence            755432   2334557788999999976 458899999999999999999999987542210           1111111


Q ss_pred             HhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      ....                       .........++.++.+||.+||+.||.+|||+.|+++
T Consensus       263 ~~~~-----------------------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          263 LLER-----------------------GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHT-----------------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhc-----------------------ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            1100                       0011223456899999999999999999999999985

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=7.1e-46  Score=341.23  Aligned_cols=243  Identities=20%  Similarity=0.319  Sum_probs=194.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|.+.  |+.||+|++....    ....+.+|+.+++.++||||+++++++.. .+.+|+|
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv   93 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   93 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence            688999999999999999999874  7899999986432    34467899999999999999999998644 4579999


Q ss_pred             EEcccc-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFMET-DLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||++| +|.+++..... .+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......  
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--  171 (278)
T 1byg_A           94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  171 (278)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence            999985 89888876432 37899999999999999999999999999999999999999999999999998654332  


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                       ....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+.....                 
T Consensus       172 -~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~-----------------  232 (278)
T 1byg_A          172 -DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-----------------  232 (278)
T ss_dssp             -----CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC-----------------
T ss_pred             -cCCCccccccCHHHhCC-CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-----------------
Confidence             23356778999999976 568999999999999999998 9999988766555544422100                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                ......+++.+.++|.+||..||.+|||+.++++
T Consensus       233 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          233 ----------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence                      0112345899999999999999999999999875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=5.4e-46  Score=348.63  Aligned_cols=251  Identities=21%  Similarity=0.319  Sum_probs=206.3

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|++.+.||+|+||+||+|.+..   .+|+|++............+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            36889999999999999999998754   499999987655555555677899999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC-----
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS-----  163 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~-----  163 (397)
                      |||+. ++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++....     
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~  186 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR  186 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred             eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence            99998 588888877666799999999999999999999999999999999999998 68999999999876432     


Q ss_pred             CCCcccccccCceeeChhcccC--------ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          164 PDRRFTHQVFARWYRAPELLFG--------AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~--------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      .........|++.|+|||++.+        ...++.++|||||||++|+|++|..||.+.........+.......    
T Consensus       187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----  262 (319)
T 2y4i_B          187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN----  262 (319)
T ss_dssp             -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC----
T ss_pred             cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC----
Confidence            1223344568889999999864        2357899999999999999999999999887766665553321100    


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                            .....++.++.+||.+||..||.+|||+.++++
T Consensus       263 ----------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          263 ----------------------LSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ----------------------CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             ----------------------CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                                  001135788999999999999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=8.9e-46  Score=345.36  Aligned_cols=261  Identities=23%  Similarity=0.310  Sum_probs=203.1

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc--cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      |...+.||+|+||+||+|.+  +++.||+|++.....  .......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  110 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV  110 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence            44459999999999999975  688999999875432  23334567799999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--
Q 015948           92 FME-TDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--  166 (397)
Q Consensus        92 ~~~-g~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--  166 (397)
                      |++ |+|.+.+...  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........  
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  190 (307)
T 2nru_A          111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV  190 (307)
T ss_dssp             CCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred             ecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence            997 6888888643  34599999999999999999999999999999999999999999999999999987654322  


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      ......|++.|+|||++.+  .++.++|||||||++|+|++|.+||.+......+..+.........       .+.++.
T Consensus       191 ~~~~~~g~~~y~aPE~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  261 (307)
T 2nru_A          191 MTSRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK-------TIEDYI  261 (307)
T ss_dssp             ECSSCCSCGGGCCHHHHTT--EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC-------CHHHHS
T ss_pred             cccccCCCcCcCChHHhcC--CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh-------hhhhhc
Confidence            2334568999999999865  4789999999999999999999999876544333333222111100       000000


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                            ...........+..+.++|.+||+.||.+|||+.+++++
T Consensus       262 ------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          262 ------DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             ------CSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ------cccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                  000111112235779999999999999999999999864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.2e-45  Score=353.12  Aligned_cols=242  Identities=19%  Similarity=0.233  Sum_probs=195.6

Q ss_pred             hcceeeeeeeeecCcEEEEEE-----EECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeec
Q 015948           11 ADRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPH   82 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a-----~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~   82 (397)
                      .++|.+.+.||+|+||+||+|     .+..+++.||||++...     ....+.+|+.+++.+.   |+||+++++++..
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            578999999999999999999     47788999999998643     2335678888888887   8999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-----------
Q 015948           83 KGNLHLVFEFME-TDLETVIRN----TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-----------  146 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~----~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-----------  146 (397)
                      ++..|+|||||+ |+|.+++..    ....+++..++.++.||+.||+|||++||+||||||+||||+.           
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~  218 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDL  218 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccc
Confidence            999999999998 689888875    3456999999999999999999999999999999999999998           


Q ss_pred             CCcEEEeeeccceeeC--CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015948          147 HGQLKLADFGLARIFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI  224 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~--~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i  224 (397)
                      ++.+||+|||+|+.+.  .........+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.......     
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----  292 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----  292 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence            8999999999998653  23345566789999999999987 558999999999999999999999886432200     


Q ss_pred             HHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          225 FAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                 +              .....+...  ..++.+.+++..||..+|.+|++..+.+.
T Consensus       293 -----------~--------------~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~  331 (365)
T 3e7e_A          293 -----------C--------------KPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR  331 (365)
T ss_dssp             -----------E--------------EECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred             -----------e--------------eechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence                       0              000000111  12578899999999999999966544443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.7e-46  Score=364.71  Aligned_cols=249  Identities=16%  Similarity=0.164  Sum_probs=194.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCC-CCee---------------
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKS-PHII---------------   74 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~h-p~iv---------------   74 (397)
                      ..|.+.+.||+|+||+||+|++..+|+.||||++...... ......+.+|+.+++.+.| +|..               
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            3588999999999999999999999999999998744322 2334567789999999987 3211               


Q ss_pred             ------EEEeeeec-----CCeEEEEEEccccCHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCC
Q 015948           75 ------ELIDAFPH-----KGNLHLVFEFMETDLETVIR------NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM  137 (397)
Q Consensus        75 ------~l~~~~~~-----~~~~~lv~e~~~g~L~~~~~------~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDl  137 (397)
                            .+..++..     ...++++|+++.|+|.+++.      ..+..+++..+..++.||+.||+|||++||+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence                  11111211     23578999999999998884      22344778889999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhccc---------CccCCCCcchHHHHHHHHHHHHhC
Q 015948          138 KPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF---------GAKQYGAGVDVWAAGCIFAELLNR  208 (397)
Q Consensus       138 kp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~---------~~~~~~~~~DiwSlG~il~ell~g  208 (397)
                      ||+||||+.++.+||+|||+++..+..   ....+| +.|+|||++.         ....++.++|||||||++|||++|
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg  313 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA  313 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred             ccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence            999999999999999999999875432   445567 8899999993         335588899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHH
Q 015948          209 RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA  288 (397)
Q Consensus       209 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~  288 (397)
                      +.||.+.+..+....+                                ....+.+++++.+||.+||+.||++|||+.++
T Consensus       314 ~~Pf~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~  361 (413)
T 3dzo_A          314 DLPNTDDAALGGSEWI--------------------------------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA  361 (413)
T ss_dssp             SCCCCTTGGGSCSGGG--------------------------------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCcchhhhHHHH--------------------------------HhhcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            9999765432111100                                01123568999999999999999999999999


Q ss_pred             hcCCCCCC
Q 015948          289 LEHRYFSS  296 (397)
Q Consensus       289 l~hp~~~~  296 (397)
                      ++||||..
T Consensus       362 l~~~~~~~  369 (413)
T 3dzo_A          362 METPEYEQ  369 (413)
T ss_dssp             TTSHHHHH
T ss_pred             HhCHHHHH
Confidence            99999964

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=8.9e-47  Score=380.99  Aligned_cols=282  Identities=23%  Similarity=0.287  Sum_probs=208.4

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-----
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-----   82 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----   82 (397)
                      ....++|++.+.||+|+||+||+|.+..+|+.||||++.... .......+.+|+.+++.++||||+++++++..     
T Consensus        10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~   88 (676)
T 3qa8_A           10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLA   88 (676)
T ss_dssp             -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCC
T ss_pred             CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccccc
Confidence            445689999999999999999999999999999999986542 22234457789999999999999999998765     


Q ss_pred             -CCeEEEEEEccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc---EEEeee
Q 015948           83 -KGNLHLVFEFME-TDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADF  155 (397)
Q Consensus        83 -~~~~~lv~e~~~-g~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~---~kl~DF  155 (397)
                       ++..|+|||||+ |+|.+++....  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+||
T Consensus        89 ~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DF  168 (676)
T 3qa8_A           89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDL  168 (676)
T ss_dssp             TTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred             CCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence             678899999997 58888887643  25899999999999999999999999999999999999997765   999999


Q ss_pred             ccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          156 GLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       156 G~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      |++....... ......|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+...........   .......
T Consensus       169 G~a~~~~~~~-~~~~~~gt~~Y~APE~l~~-~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i---~~~~~~~  243 (676)
T 3qa8_A          169 GYAKELDQGE-LCTEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV---REKSNEH  243 (676)
T ss_dssp             CCCCBTTSCC-CCCCCCSCCTTCSSCSSCC-SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTC---C------
T ss_pred             cccccccccc-ccccccCCcccCChHHhcc-CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhh---hcccchh
Confidence            9998765432 3445678999999999976 568999999999999999999999998764432211100   0000000


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ............+.. ..+....+.+.+++.+.+||.+||..||++|||++|+++||||..
T Consensus       244 ~~~~~~l~g~~~~~~-~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          244 IVVYDDLTGAVKFSS-VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CCSCCCCSSSCCCCS-SSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhhhhhhcccccccc-ccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            000000000011100 111122333446789999999999999999999999999999864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6e-45  Score=343.98  Aligned_cols=255  Identities=22%  Similarity=0.318  Sum_probs=193.3

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc--CCCCeeEEEeeeecC-
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL--KSPHIIELIDAFPHK-   83 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l--~hp~iv~l~~~~~~~-   83 (397)
                      ...+.++|++.+.||+|+||+||+|++.  |+.||||++....     .....+|.+++..+  +||||+++++++... 
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~  104 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGT  104 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence            3457889999999999999999999875  8999999986432     22344566666554  999999999998777 


Q ss_pred             ---CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC--------CccccCCCCCcEEEccCCcEE
Q 015948           84 ---GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK--------WVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        84 ---~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~--------~ivHrDlkp~NILl~~~~~~k  151 (397)
                         ..+|+||||+. |+|.+++...  .+++..++.++.||+.||.|||++        ||+||||||+|||++.++.+|
T Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  182 (337)
T 3mdy_A          105 GSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC  182 (337)
T ss_dssp             GGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             CCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence               78999999998 5899988765  489999999999999999999999        999999999999999999999


Q ss_pred             EeeeccceeeCCCCCc----ccccccCceeeChhcccCccCCCC------cchHHHHHHHHHHHHhC----------CCC
Q 015948          152 LADFGLARIFGSPDRR----FTHQVFARWYRAPELLFGAKQYGA------GVDVWAAGCIFAELLNR----------RPF  211 (397)
Q Consensus       152 l~DFG~a~~~~~~~~~----~~~~~~t~~y~aPE~l~~~~~~~~------~~DiwSlG~il~ell~g----------~~p  211 (397)
                      |+|||+++........    ....+||+.|+|||++.+.. +..      ++|||||||++|||++|          ..|
T Consensus       183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p  261 (337)
T 3mdy_A          183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL-NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP  261 (337)
T ss_dssp             ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCC-CTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             EEeCCCceeeccccccccCCCCCCccCcceeChhhccccc-CCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence            9999999876443322    22457899999999997633 344      39999999999999999          555


Q ss_pred             CCCCC----cHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHH
Q 015948          212 LQGSS----DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ  287 (397)
Q Consensus       212 f~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e  287 (397)
                      |....    ..............  ....+                  .......+++++.+||.+||+.||.+|||+.|
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~e  321 (337)
T 3mdy_A          262 YHDLVPSDPSYEDMREIVCIKKL--RPSFP------------------NRWSSDECLRQMGKLMTECWAHNPASRLTALR  321 (337)
T ss_dssp             TTTTSCSSCCHHHHHHHHTTSCC--CCCCC------------------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HhhhcCCCCchhhhHHHHhhhcc--Ccccc------------------ccchhhHHHHHHHHHHHHhhhhChhhCCCHHH
Confidence            54321    11222221111000  00000                  00001134577999999999999999999999


Q ss_pred             HhcC
Q 015948          288 ALEH  291 (397)
Q Consensus       288 ~l~h  291 (397)
                      +++|
T Consensus       322 ll~~  325 (337)
T 3mdy_A          322 VKKT  325 (337)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.9e-45  Score=343.56  Aligned_cols=270  Identities=20%  Similarity=0.317  Sum_probs=204.3

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH   82 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~   82 (397)
                      .....++|++.+.||+|+||.||+|+    +..+|+.||||++....  ......+.+|+.+++.++||||+++++++..
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  113 (326)
T 2w1i_A           36 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYS  113 (326)
T ss_dssp             -CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC
T ss_pred             cccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Confidence            34457789999999999999999998    46688999999987532  2233457799999999999999999998866


Q ss_pred             CC--eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           83 KG--NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        83 ~~--~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      .+  .+|+||||++ |+|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       114 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          114 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK  193 (326)
T ss_dssp             ----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             cCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence            44  7899999998 59999998877779999999999999999999999999999999999999999999999999998


Q ss_pred             eeCCCCCc---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          160 IFGSPDRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       160 ~~~~~~~~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ........   .....++..|+|||++.+ ..++.++|||||||++|+|++|..||.....  ..   ....+......+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~tg~~~~~~~~~--~~---~~~~~~~~~~~~  267 (326)
T 2w1i_A          194 VLPQDKEYYKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPA--EF---MRMIGNDKQGQM  267 (326)
T ss_dssp             ECCSSCSEEECSSCCSCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH--HH---HHHHCTTCCTHH
T ss_pred             hccccccccccccCCCCceeEECchhhcC-CCCCchhhHHHHHHHHHHHHhcCCCCCCCHH--HH---HHhhccccchhh
Confidence            87544321   223456677999999976 4588999999999999999999988764211  00   000000000000


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      .     .... ...............+++++.+||.+||..||.+|||+.|+++
T Consensus       268 ~-----~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          268 I-----VFHL-IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             H-----HHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             h-----HHHH-HHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            0     0000 0000000001123456899999999999999999999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.9e-45  Score=368.53  Aligned_cols=253  Identities=23%  Similarity=0.386  Sum_probs=209.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      -.++|++.+.||+|+||+||+|.+.. +..||||++.....   ....+.+|+.+|+.++||||+++++++.+ +.+|+|
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv  339 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  339 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence            36789999999999999999999875 46799999875432   23468899999999999999999999866 678999


Q ss_pred             EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948           90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-  166 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-  166 (397)
                      ||||. |+|.+++... +..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++....... 
T Consensus       340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  419 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  419 (535)
T ss_dssp             ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred             eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence            99998 5899988753 34589999999999999999999999999999999999999999999999999986543211 


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......++..|+|||++.+ ..++.++|||||||+||||++ |..||.+....+.+..+......               
T Consensus       420 ~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---------------  483 (535)
T 2h8h_A          420 ARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------------  483 (535)
T ss_dssp             TTCSTTSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCC---------------
T ss_pred             cccCCcCcccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence            1223345677999999976 568999999999999999999 99999998887777666433111               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC--CCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH--RYFS  295 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h--p~~~  295 (397)
                                  .....++.++.+||.+||+.||++|||++++++.  .+|.
T Consensus       484 ------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          484 ------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             ------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence                        1123458899999999999999999999999863  4554

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=4.7e-47  Score=358.84  Aligned_cols=248  Identities=21%  Similarity=0.234  Sum_probs=191.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc------CCccchHHHHHHHHHhcC---------CCCeeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK------EGVNFTALREIKLLKELK---------SPHIIE   75 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~------~~~~~~~~~E~~~l~~l~---------hp~iv~   75 (397)
                      .++|++.+.||+|+||+||+|++  +|+.||||++......      ......+.+|+.+|+.++         ||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            58899999999999999999988  6899999999876432      222256788999999996         555555


Q ss_pred             EE-----------------eeeec-------------CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 015948           76 LI-----------------DAFPH-------------KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGL  124 (397)
Q Consensus        76 l~-----------------~~~~~-------------~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL  124 (397)
                      +.                 ++|.+             .+.+|+|||||. |+++..+.+  ..+++..++.++.||+.||
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHH
Confidence            54                 44443             789999999997 456666654  3489999999999999999


Q ss_pred             HHhH-hCCccccCCCCCcEEEccCC--------------------cEEEeeeccceeeCCCCCcccccccCceeeChhcc
Q 015948          125 AFCH-KKWVLHRDMKPNNLLIGSHG--------------------QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELL  183 (397)
Q Consensus       125 ~~lH-~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l  183 (397)
                      +||| ++||+||||||+||||+.++                    .+||+|||+|+.....     ..+||+.|+|||++
T Consensus       175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE~~  249 (336)
T 2vuw_A          175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDEDLF  249 (336)
T ss_dssp             HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSGGG
T ss_pred             HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChhhh
Confidence            9999 99999999999999999987                    8999999999987542     35789999999999


Q ss_pred             cCccCCCCcchHHHHHHH-HHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCC
Q 015948          184 FGAKQYGAGVDVWAAGCI-FAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP  261 (397)
Q Consensus       184 ~~~~~~~~~~DiwSlG~i-l~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (397)
                      .+..  +.++||||||++ .++++.|..||.+... ......+.......                     .......++
T Consensus       250 ~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~  306 (336)
T 2vuw_A          250 TGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK---------------------TKCNTPAMK  306 (336)
T ss_dssp             CCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS---------------------SCCCSHHHH
T ss_pred             cCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccC---------------------cccchhhhh
Confidence            8633  889999998777 7778899998853211 11222222211100                     001112223


Q ss_pred             CCCHHHHHHHHHhcCcCCCCCCCHHHHh-cCCCCC
Q 015948          262 SASDDALDLLSKMFTYDPKARITAQQAL-EHRYFS  295 (397)
Q Consensus       262 ~~s~~~~~li~~~L~~dP~~R~t~~e~l-~hp~~~  295 (397)
                      .+|+++++||.+||++|     |++|+| +||||+
T Consensus       307 ~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          307 QIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            45889999999999987     999999 999995

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.1e-45  Score=347.28  Aligned_cols=273  Identities=23%  Similarity=0.289  Sum_probs=190.5

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHH--HHHHHhcCCCCeeEEEeee-----ec
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALRE--IKLLKELKSPHIIELIDAF-----PH   82 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E--~~~l~~l~hp~iv~l~~~~-----~~   82 (397)
                      -.++|++.+.||+|+||+||+|++  +++.||||++.....     ..+..|  +..+..++||||+++++.+     ..
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~   83 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR-----QNFINEKNIYRVPLMEHDNIARFIVGDERVTADG   83 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH-----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred             ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch-----hhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence            368999999999999999999976  689999999864322     223334  4445568999999999754     23


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC---------CccccCCCCCcEEEccCCcEEE
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK---------WVLHRDMKPNNLLIGSHGQLKL  152 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---------~ivHrDlkp~NILl~~~~~~kl  152 (397)
                      ...+|+|||||+ |+|.+++....  .++..++.++.||+.||.|||++         ||+||||||+||||+.++.+||
T Consensus        84 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           84 RMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             CEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred             CceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence            447899999997 58988887654  58899999999999999999999         9999999999999999999999


Q ss_pred             eeeccceeeCCC--------CCcccccccCceeeChhcccCc------cCCCCcchHHHHHHHHHHHHhCC-CCCCCCCc
Q 015948          153 ADFGLARIFGSP--------DRRFTHQVFARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLNRR-PFLQGSSD  217 (397)
Q Consensus       153 ~DFG~a~~~~~~--------~~~~~~~~~t~~y~aPE~l~~~------~~~~~~~DiwSlG~il~ell~g~-~pf~~~~~  217 (397)
                      +|||+++.+...        .......+||+.|+|||++.+.      ..++.++|||||||++|||++|. ++|.+...
T Consensus       162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  241 (336)
T 3g2f_A          162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV  241 (336)
T ss_dssp             CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred             eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence            999999876432        1223355789999999999762      34667899999999999999996 44444321


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcccc---CCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc----
Q 015948          218 IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSL---FPSASDDALDLLSKMFTYDPKARITAQQALE----  290 (397)
Q Consensus       218 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~----  290 (397)
                      .+....+....+...     ........ .......+.+...   ....++++.+||.+||+.||++|||++|+++    
T Consensus       242 ~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~  315 (336)
T 3g2f_A          242 PEYQMAFQTEVGNHP-----TFEDMQVL-VSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE  315 (336)
T ss_dssp             CCCCCTTHHHHCSSC-----CHHHHHHH-HTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hHHHHhhhcccCCCc-----hHHHHHhh-hcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence            110000000000000     00000000 0000000011111   1123568999999999999999999999954    


Q ss_pred             --CCCCCCC
Q 015948          291 --HRYFSSA  297 (397)
Q Consensus       291 --hp~~~~~  297 (397)
                        ++|-++.
T Consensus       316 ll~~~~~~~  324 (336)
T 3g2f_A          316 LMMIWERNK  324 (336)
T ss_dssp             HHHCCCC--
T ss_pred             HHHHHHhcc
Confidence              6786653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.4e-44  Score=369.72  Aligned_cols=251  Identities=24%  Similarity=0.392  Sum_probs=207.4

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      ..++|.+.+.||+|+||+||+|++..+   +..||+|.+.... .......+.+|+.+++.++||||+++++++. ++.+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~  465 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV  465 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence            367899999999999999999998654   4579999876432 2223356788999999999999999999985 4668


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+||||+. |+|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~  545 (656)
T 2j0j_A          466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  545 (656)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence            99999998 68999988777679999999999999999999999999999999999999999999999999998764432


Q ss_pred             C-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          166 R-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       166 ~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . ......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+......             
T Consensus       546 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~-------------  611 (656)
T 2j0j_A          546 YYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL-------------  611 (656)
T ss_dssp             --------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCC-------------
T ss_pred             ceeccCCCCCcceeCHHHhcC-CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-------------
Confidence            2 2233456778999999976 568999999999999999997 99999998888777776553111             


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                    ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus       612 --------------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          612 --------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             --------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                          112345899999999999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=5.2e-44  Score=338.39  Aligned_cols=256  Identities=24%  Similarity=0.331  Sum_probs=200.0

Q ss_pred             ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHh--cCCCCeeEEEeeeecCC
Q 015948            7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE--LKSPHIIELIDAFPHKG   84 (397)
Q Consensus         7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~--l~hp~iv~l~~~~~~~~   84 (397)
                      ...+.++|.+.+.||+|+||+||+|++  +|+.||||++...     ....+.+|+++++.  ++||||+++++++....
T Consensus        37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           37 QRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             cccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence            345679999999999999999999987  4899999998532     22356789999988  79999999999998776


Q ss_pred             ----eEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH--------hCCccccCCCCCcEEEccCCcEE
Q 015948           85 ----NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH--------KKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        85 ----~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH--------~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                          .+|+||||++| +|.+++.+.  .+++..++.++.||+.||.|||        ++||+||||||+||||+.++++|
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k  187 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  187 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred             CccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence                89999999985 899988764  4899999999999999999999        89999999999999999999999


Q ss_pred             EeeeccceeeCCCCC----cccccccCceeeChhcccCccC-----CCCcchHHHHHHHHHHHHhC----------CCCC
Q 015948          152 LADFGLARIFGSPDR----RFTHQVFARWYRAPELLFGAKQ-----YGAGVDVWAAGCIFAELLNR----------RPFL  212 (397)
Q Consensus       152 l~DFG~a~~~~~~~~----~~~~~~~t~~y~aPE~l~~~~~-----~~~~~DiwSlG~il~ell~g----------~~pf  212 (397)
                      |+|||++........    ......||+.|+|||++.+...     ++.++|||||||++|||++|          ..||
T Consensus       188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~  267 (342)
T 1b6c_B          188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  267 (342)
T ss_dssp             ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence            999999988755432    2345578999999999976422     23689999999999999999          6677


Q ss_pred             CCCC----cHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHH
Q 015948          213 QGSS----DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA  288 (397)
Q Consensus       213 ~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~  288 (397)
                      ....    ....+......  .......+.                  .......+..+.+||.+||+.||++|||++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i  327 (342)
T 1b6c_B          268 YDLVPSDPSVEEMRKVVCE--QKLRPNIPN------------------RWQSCEALRVMAKIMRECWYANGAARLTALRI  327 (342)
T ss_dssp             TTTSCSSCCHHHHHHHHTT--SCCCCCCCG------------------GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             cccCcCcccHHHHHHHHHH--HHhCCCCcc------------------cccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence            6542    12222222110  000000000                  00011224678999999999999999999999


Q ss_pred             hcC
Q 015948          289 LEH  291 (397)
Q Consensus       289 l~h  291 (397)
                      ++|
T Consensus       328 ~~~  330 (342)
T 1b6c_B          328 KKT  330 (342)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.3e-43  Score=327.78  Aligned_cols=232  Identities=16%  Similarity=0.092  Sum_probs=188.2

Q ss_pred             cCh-hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecC
Q 015948            6 LSK-KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHK   83 (397)
Q Consensus         6 ~~~-~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~   83 (397)
                      .+. .+.++|++.+.||+|+||.||+|++..+|+.||||++....... .....+.+|+.+++.++||||+++++++.++
T Consensus        24 ~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~  103 (286)
T 3uqc_A           24 PGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR  103 (286)
T ss_dssp             TTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             CCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC
Confidence            344 56789999999999999999999999999999999997654322 2235678899999999999999999999999


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           84 GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      +..|+||||++ ++|.+++.. +  .....+..++.||+.||+|||++||+||||||+||||+.+|.+||+++|      
T Consensus       104 ~~~~lv~e~~~g~~L~~~l~~-~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~------  174 (286)
T 3uqc_A          104 AGGLVVAEWIRGGSLQEVADT-S--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA------  174 (286)
T ss_dssp             TEEEEEEECCCEEEHHHHHTT-C--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred             CcEEEEEEecCCCCHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc------
Confidence            99999999998 578887743 2  4666788999999999999999999999999999999999999998443      


Q ss_pred             CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                                    |++        .++.++|||||||++|+|++|+.||.+.+....+.                    
T Consensus       175 --------------~~~--------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~--------------------  212 (286)
T 3uqc_A          175 --------------TMP--------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA--------------------  212 (286)
T ss_dssp             --------------CCT--------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE--------------------
T ss_pred             --------------ccC--------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH--------------------
Confidence                          333        37889999999999999999999998764321000                    


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                       ..........+......+.+++++.+||.+||+.||.+| |+.|+++
T Consensus       213 -~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          213 -PAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             -ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             -HHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence             000000111222335556789999999999999999999 9999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3e-44  Score=370.16  Aligned_cols=245  Identities=22%  Similarity=0.330  Sum_probs=198.5

Q ss_pred             cChhhhcceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948            6 LSKKVADRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG   84 (397)
Q Consensus         6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   84 (397)
                      .+..+.++|++.+.||+|+||+||+|++.. +|+.||||++..... ......+.+|+.+|++++||||++++++|.+.+
T Consensus        74 ~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  152 (681)
T 2pzi_A           74 PGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTD  152 (681)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEEC
T ss_pred             CCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC-HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecC
Confidence            345677999999999999999999999976 789999999865322 222345678999999999999999999998766


Q ss_pred             e-----EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948           85 N-----LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA  158 (397)
Q Consensus        85 ~-----~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a  158 (397)
                      .     .|+||||++| +|...+..   .+++..++.++.||+.||.|||++||+||||||+||||+.+ .+||+|||++
T Consensus       153 ~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a  228 (681)
T 2pzi_A          153 RHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAV  228 (681)
T ss_dssp             TTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred             CCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccc
Confidence            5     7999999985 66655443   59999999999999999999999999999999999999875 8999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      +.....    ...+||+.|+|||++.+  .++.++|||||||++|+|++|.++|.+....                ..+.
T Consensus       229 ~~~~~~----~~~~gt~~y~aPE~~~~--~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------------~~~~  286 (681)
T 2pzi_A          229 SRINSF----GYLYGTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLDLPTRNGRYVD----------------GLPE  286 (681)
T ss_dssp             EETTCC----SCCCCCTTTSCTTHHHH--CSCHHHHHHHHHHHHHHHHSCCCEETTEECS----------------SCCT
T ss_pred             hhcccC----CccCCCccccCHHHHcC--CCCCceehhhhHHHHHHHHhCCCCCcccccc----------------cccc
Confidence            876543    45678999999999865  3588999999999999999999887643110                0000


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                                    .    ......++.+.+||.+||+.||.+||+..+++.|+|+.
T Consensus       287 --------------~----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          287 --------------D----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             --------------T----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             --------------c----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                          0    00011267899999999999999999999999988864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=6.2e-38  Score=315.24  Aligned_cols=185  Identities=16%  Similarity=0.048  Sum_probs=134.3

Q ss_pred             eeeecCcEEEEEEEECCCCcEEEEEEeecCCccC--------CccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEE
Q 015948           19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE--------GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~--------~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++.|++|.+..++....|+.||+|++.+.....        .....+.+|+++|+++ .|+||+++++++++++.+|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            4567888888888888899999999998653221        2234577899999999 699999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||||+| +|.+.+... +++++.   .|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.........
T Consensus       321 MEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~  396 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP  396 (569)
T ss_dssp             EECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS
T ss_pred             EecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc
Confidence            999996 777777654 457664   478999999999999999999999999999999999999999999887666667


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCC
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR  209 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~  209 (397)
                      ...+||+.|||||++.+  .+..++|+||+|+++|+|.++.
T Consensus       397 ~t~vGTp~YmAPE~l~g--~~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAE--NKSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             HHHHHHHHHHHHHHC-------------------CCCCTTH
T ss_pred             cCceechhhccHHHhCC--CCCCcccccccccchhhhcccc
Confidence            78899999999999976  4677899999999998887654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.96  E-value=2.8e-30  Score=258.10  Aligned_cols=185  Identities=17%  Similarity=0.173  Sum_probs=139.8

Q ss_pred             eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      ...+.||+|+||+||+|  ...+..+++|+.........      ....+.+|+.+|++++||||+++..++...+..|+
T Consensus       339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            45678999999999999  45678999998765332211      12346799999999999999954444445666799


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||||+ |+|.+++..         +..++.||+.||+|||++||+||||||+|||++.  ++||+|||+|+........
T Consensus       417 VmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~  485 (540)
T 3en9_A          417 MMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK  485 (540)
T ss_dssp             EEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred             EEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence            999998 688887765         5689999999999999999999999999999998  9999999999987543221


Q ss_pred             -------ccccccCceeeChhcccC-ccCCCCcchHHHHHHHHHHHHhCCCCC
Q 015948          168 -------FTHQVFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFL  212 (397)
Q Consensus       168 -------~~~~~~t~~y~aPE~l~~-~~~~~~~~DiwSlG~il~ell~g~~pf  212 (397)
                             ....+||++|||||++.+ ...|+..+|+||...-..+.+-++..+
T Consensus       486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                   235678999999999864 134788899999988888877665443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.94  E-value=1.6e-27  Score=219.10  Aligned_cols=158  Identities=18%  Similarity=0.285  Sum_probs=120.5

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC----------------ccchHHHHHHHHHhcCCCCeeEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----------------VNFTALREIKLLKELKSPHIIELI   77 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~----------------~~~~~~~E~~~l~~l~hp~iv~l~   77 (397)
                      |.+.+.||+|+||.||+|.+ .+|+.||||+++.......                ....+.+|+.+|+.++  | +++.
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~  167 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP  167 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred             EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence            34459999999999999999 8899999999975432111                1234678999999999  4 6666


Q ss_pred             eeeecCCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948           78 DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        78 ~~~~~~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                      +++.. +..|+|||||+| +|.+ +.     .  ..+..++.||+.||.|||++||+||||||+||||+ +|.+||+|||
T Consensus       168 ~~~~~-~~~~lvmE~~~g~~L~~-l~-----~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG  237 (282)
T 1zar_A          168 KVYAW-EGNAVLMELIDAKELYR-VR-----V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFP  237 (282)
T ss_dssp             CEEEE-ETTEEEEECCCCEEGGG-CC-----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred             eEEec-cceEEEEEecCCCcHHH-cc-----h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECC
Confidence            65544 456999999985 7766 31     1  33557999999999999999999999999999999 9999999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccC---------ccCCCCcchHHHH
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFG---------AKQYGAGVDVWAA  198 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~---------~~~~~~~~DiwSl  198 (397)
                      +|+....             |+|||.+..         .+.|+..+|+|.+
T Consensus       238 ~a~~~~~-------------~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~  275 (282)
T 1zar_A          238 QSVEVGE-------------EGWREILERDVRNIITYFSRTYRTEKDINSA  275 (282)
T ss_dssp             TCEETTS-------------TTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred             CCeECCC-------------CCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence            9985432             789998742         1235566666653

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.90  E-value=6.8e-24  Score=192.47  Aligned_cols=139  Identities=18%  Similarity=0.209  Sum_probs=108.4

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcE--EEEEEeecCCccCC----------------------ccchHHHHHHHHHhcC
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQT--VAIKKIRLGKQKEG----------------------VNFTALREIKLLKELK   69 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~--~aiK~i~~~~~~~~----------------------~~~~~~~E~~~l~~l~   69 (397)
                      |.+.+.||+|+||.||+|.+..+|+.  ||||+++.......                      ....+.+|+.+|+.+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            77899999999999999998778888  99999765421100                      0124678999999998


Q ss_pred             CCCe--eEEEeeeecCCeEEEEEEcccc------CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH-hCCccccCCCCC
Q 015948           70 SPHI--IELIDAFPHKGNLHLVFEFMET------DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-KKWVLHRDMKPN  140 (397)
Q Consensus        70 hp~i--v~l~~~~~~~~~~~lv~e~~~g------~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH-~~~ivHrDlkp~  140 (397)
                      |++|  ..+++.    +..|+||||+++      .|.+....    .++..+..++.||+.||.||| ++||+||||||+
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~  200 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEY  200 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTT
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence            8754  444432    346899999963      45554332    335677899999999999999 999999999999


Q ss_pred             cEEEccCCcEEEeeeccceeeC
Q 015948          141 NLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus       141 NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      |||++.  .++|+|||+|....
T Consensus       201 NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          201 NIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             SEEESS--SEEECCCTTCEETT
T ss_pred             HEEEcC--cEEEEECcccccCC
Confidence            999988  89999999998753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.82  E-value=6.4e-21  Score=180.17  Aligned_cols=140  Identities=19%  Similarity=0.191  Sum_probs=99.7

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC------------Cccc--------hHHHHHHHHHhcCCCCe
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE------------GVNF--------TALREIKLLKELKSPHI   73 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~------------~~~~--------~~~~E~~~l~~l~hp~i   73 (397)
                      |.+.+.||.|+||.||+|.+. +|+.||||+++......            ....        .+.+|...|.++.+.++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            899999999999999999875 68999999986532110            0000        12346666776644433


Q ss_pred             --eEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---
Q 015948           74 --IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---  148 (397)
Q Consensus        74 --v~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---  148 (397)
                        ...++..   . .+|||||++|..+..+      .....+..++.||+.+|.+||++|||||||||.||||+.+|   
T Consensus       176 ~vp~p~~~~---~-~~LVME~i~G~~L~~l------~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~  245 (397)
T 4gyi_A          176 PVPEPIAQS---R-HTIVMSLVDALPMRQV------SSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAE  245 (397)
T ss_dssp             SCCCEEEEE---T-TEEEEECCSCEEGGGC------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSS
T ss_pred             CCCeeeecc---C-ceEEEEecCCccHhhh------cccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcc
Confidence              2223222   1 2699999997433221      12234567889999999999999999999999999999887   


Q ss_pred             -------cEEEeeeccceeeCCC
Q 015948          149 -------QLKLADFGLARIFGSP  164 (397)
Q Consensus       149 -------~~kl~DFG~a~~~~~~  164 (397)
                             .+.|+||+-+.....+
T Consensus       246 d~~~~~~~~~iID~~Q~V~~~hp  268 (397)
T 4gyi_A          246 DPSSITLTPIIIXFPQMVSMDHP  268 (397)
T ss_dssp             CTTSEEEEEEECCCTTCEETTST
T ss_pred             cccccccceEEEEeCCcccCCCC
Confidence                   3899999988765443

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.52  E-value=5.7e-14  Score=127.09  Aligned_cols=141  Identities=13%  Similarity=0.153  Sum_probs=110.8

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~l   88 (397)
                      ..+.|++...++.|+++.||++..  .+..+++|.......  .....+.+|+.+|+.+. +..+.++++++.+.+..|+
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            457799999999999999999964  368999999865321  12235788999999995 5678889999988999999


Q ss_pred             EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh--------------------------------------
Q 015948           89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK--------------------------------------  129 (397)
Q Consensus        89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~--------------------------------------  129 (397)
                      ||||++| ++...+      .+......++.++..+|..||+                                      
T Consensus        88 v~e~i~G~~l~~~~------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T 3tm0_A           88 LMSEADGVLCSEEY------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             EEECCSSEEHHHHC------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred             EEEecCCeehhhcc------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence            9999998 454432      1223345788899999999998                                      


Q ss_pred             ---------------------CCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          130 ---------------------KWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       130 ---------------------~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                                           .+++|+|++|.|||++.++.+.|+||+.+..
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                 4589999999999998755567999998863

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.40  E-value=7.8e-13  Score=119.11  Aligned_cols=136  Identities=14%  Similarity=0.069  Sum_probs=99.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEeeeecCCeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAFPHKGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~~~~~~~~l   88 (397)
                      ...|.+....+.|..+.||++. ..+|..+++|.....     ....+.+|+.+++.+.+.+  +.++++++..++..|+
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~-~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~   92 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLS-AQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL   92 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEE-CTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred             cCCCceEecccCCCCceEEEEe-cCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence            4457765555566679999995 346778999986532     1235778999999996544  5568888888888999


Q ss_pred             EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC-------------------------------------
Q 015948           89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW-------------------------------------  131 (397)
Q Consensus        89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~-------------------------------------  131 (397)
                      ||||++|..+. . . .  .+.   ..++.++...|..||+..                                     
T Consensus        93 v~e~i~G~~l~-~-~-~--~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (264)
T 1nd4_A           93 LLGEVPGQDLL-S-S-H--LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG  164 (264)
T ss_dssp             EEECCSSEETT-T-S-C--CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred             EEEecCCcccC-c-C-c--CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence            99999984333 1 1 1  222   356677777888888643                                     


Q ss_pred             ---------------------ccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          132 ---------------------VLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       132 ---------------------ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                                           ++|+|++|.|||++.++.+.|+|||.+..
T Consensus       165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                 99999999999998766667999999864

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.29  E-value=5.1e-12  Score=119.67  Aligned_cols=142  Identities=18%  Similarity=0.246  Sum_probs=104.5

Q ss_pred             eeeeeeeecCcEEEEEEEECCCCcEEEEEEee--cCCccCCccchHHHHHHHHHhcCC--CCeeEEEeeeecC---CeEE
Q 015948           15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIR--LGKQKEGVNFTALREIKLLKELKS--PHIIELIDAFPHK---GNLH   87 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~--~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~l~~~~~~~---~~~~   87 (397)
                      .-.+.|+.|.++.||++...  +..+++|+..  ..... .....+.+|+.+++.|..  ..+.+++.++.+.   +..|
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~  117 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF  117 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred             ceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence            45678899999999998643  4688888765  33211 123367789999999974  4578888888766   4589


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh--------------------------------------
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK--------------------------------------  129 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~--------------------------------------  129 (397)
                      +||||++|..+..  ..-..+++.....++.+++.+|..||+                                      
T Consensus       118 ~vme~v~G~~l~~--~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          118 YIMEFVSGRVLWD--QSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             EEEECCCCBCCCC--TTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EEEEecCCeecCC--CccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            9999999843311  111236788888999999999999997                                      


Q ss_pred             --------------------CCccccCCCCCcEEEccCCc--EEEeeeccceee
Q 015948          130 --------------------KWVLHRDMKPNNLLIGSHGQ--LKLADFGLARIF  161 (397)
Q Consensus       130 --------------------~~ivHrDlkp~NILl~~~~~--~kl~DFG~a~~~  161 (397)
                                          .+++|+|++|.|||++.++.  +.|+||+.+...
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                                36999999999999997753  689999998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.15  E-value=2.4e-11  Score=112.36  Aligned_cols=183  Identities=17%  Similarity=0.155  Sum_probs=117.8

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCC--eeEEEeeeecCC---eEEEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPH--IIELIDAFPHKG---NLHLVF   90 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~--iv~l~~~~~~~~---~~~lv~   90 (397)
                      .+.++.|....||++.     ..+++|+....    .....+.+|+.+|+.+. +..  +.+++......+   ..|+||
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF   95 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence            5668999999999872     46888975322    22345678999999884 322  344554443333   458999


Q ss_pred             EccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh----------------------------------------
Q 015948           91 EFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK----------------------------------------  129 (397)
Q Consensus        91 e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~----------------------------------------  129 (397)
                      ++++|. +......   .++..+...++.++...|..||+                                        
T Consensus        96 ~~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A           96 TKIKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             ECCCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             cccCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            999983 3332221   26778888888888888888886                                        


Q ss_pred             ------------------CCccccCCCCCcEEEcc--CCcEEEeeeccceeeCCCCCcccccccCceeeChhccc----C
Q 015948          130 ------------------KWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF----G  185 (397)
Q Consensus       130 ------------------~~ivHrDlkp~NILl~~--~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~----~  185 (397)
                                        ..++|+|++|.||+++.  ++.+.|+||+.+... ++............-..|+...    .
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~l~~  251 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS-DPDNDFISLMEDDEEYGMEFVSKILNH  251 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE-CTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC-ChHHHHHHHHhhccccCHHHHHHHHHH
Confidence                              13799999999999998  456889999998764 2221111111000002222210    0


Q ss_pred             c---------cCCCCcchHHHHHHHHHHHHhCCCCC
Q 015948          186 A---------KQYGAGVDVWAAGCIFAELLNRRPFL  212 (397)
Q Consensus       186 ~---------~~~~~~~DiwSlG~il~ell~g~~pf  212 (397)
                      .         .....-.+.|++|.++|.+.+|.++|
T Consensus       252 Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          252 YKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            0         00112258999999999999998654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.78  E-value=5.8e-08  Score=89.58  Aligned_cols=133  Identities=18%  Similarity=0.126  Sum_probs=90.3

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCC---CeeEEEeeee-cCCeEEEEEEc
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP---HIIELIDAFP-HKGNLHLVFEF   92 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp---~iv~l~~~~~-~~~~~~lv~e~   92 (397)
                      .+.++.|....||+.     |..+++|+-..    ......+.+|+.+|+.+.+.   .+.+++.+.. ..+..|+||||
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence            466889999999998     56788887421    12234567899999999752   2455565553 45678899999


Q ss_pred             cccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-----------------------------------------
Q 015948           93 METD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-----------------------------------------  130 (397)
Q Consensus        93 ~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-----------------------------------------  130 (397)
                      ++|. +......   .++......++.++...|..||+.                                         
T Consensus        95 i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~  171 (306)
T 3tdw_A           95 VQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY  171 (306)
T ss_dssp             CCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred             cCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence            9984 3332111   134455555555555555555532                                         


Q ss_pred             -------------------CccccCCCCCcEEEcc---CCc-EEEeeeccceee
Q 015948          131 -------------------WVLHRDMKPNNLLIGS---HGQ-LKLADFGLARIF  161 (397)
Q Consensus       131 -------------------~ivHrDlkp~NILl~~---~~~-~kl~DFG~a~~~  161 (397)
                                         .++|+|++|.|||++.   ++. +.|+||+.+...
T Consensus       172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                               3599999999999987   455 489999998764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.73  E-value=7.4e-08  Score=86.99  Aligned_cols=132  Identities=16%  Similarity=0.129  Sum_probs=90.4

Q ss_pred             eeeecCcE-EEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEEEEEEcccc-
Q 015948           19 VLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMET-   95 (397)
Q Consensus        19 ~LG~G~~g-~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~e~~~g-   95 (397)
                      .+..|..+ .||+......+..+++|+-...     ....+.+|..+|+.+.. --+.+++.++.+.+..|+|||+++| 
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~  105 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK  105 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence            34445444 7999877777788999985432     22346689999998853 2366778888888999999999998 


Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC---------------------------------------------
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK---------------------------------------------  130 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---------------------------------------------  130 (397)
                      .+.......     ......+..++...|..||+.                                             
T Consensus       106 ~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (272)
T 4gkh_A          106 TAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW  180 (272)
T ss_dssp             EHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred             cccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence            444333221     122233445555555555521                                             


Q ss_pred             -------------CccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          131 -------------WVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       131 -------------~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                                   .++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                         278999999999998777677999999864

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.54  E-value=4e-07  Score=87.10  Aligned_cols=78  Identities=17%  Similarity=0.145  Sum_probs=49.9

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc--c---CCccchHHHHHHHHHhcCC--CC-eeEEEeeeecCCeEE
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ--K---EGVNFTALREIKLLKELKS--PH-IIELIDAFPHKGNLH   87 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~---~~~~~~~~~E~~~l~~l~h--p~-iv~l~~~~~~~~~~~   87 (397)
                      -.+.||.|.++.||++....+++.|+||.......  .   .....+...|..+|+.+..  +. +.+++.+  +.+..+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence            36689999999999997666678899998653221  0   1123345789999998743  33 3455543  334457


Q ss_pred             EEEEcccc
Q 015948           88 LVFEFMET   95 (397)
Q Consensus        88 lv~e~~~g   95 (397)
                      +||||++|
T Consensus       112 lvmE~l~g  119 (397)
T 2olc_A          112 TVMEDLSH  119 (397)
T ss_dssp             EEECCCTT
T ss_pred             EEEEeCCC
Confidence            99999986

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.43  E-value=8.8e-07  Score=82.56  Aligned_cols=143  Identities=17%  Similarity=0.205  Sum_probs=81.0

Q ss_pred             hhcceee----eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC--CCeeEEEe-----
Q 015948           10 VADRYLK----REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PHIIELID-----   78 (397)
Q Consensus        10 ~~~~y~i----~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~l~~-----   78 (397)
                      +.+.|.+    .+.|+.|..+.||++...  +..+++|+....      ...+..|+.+++.|..  -.+.+++.     
T Consensus        26 l~~~~~~~~~~~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~   97 (346)
T 2q83_A           26 VLQGWDVQAEKIDVIQGNQMALVWKVHTD--SGAVCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGS   97 (346)
T ss_dssp             HGGGSCCCCCEEEECC----CEEEEEEET--TEEEEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSC
T ss_pred             HHHHcCCceEEeeeccccccCcEEEEEeC--CCCEEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCC
Confidence            4455542    345666778999999653  345899988642      1233346666665531  12333332     


Q ss_pred             -eeecCCeEEEEEEccccC-H--------------HHHHHhcCCCC--C-----------HH--------H---------
Q 015948           79 -AFPHKGNLHLVFEFMETD-L--------------ETVIRNTNIFL--S-----------PA--------D---------  112 (397)
Q Consensus        79 -~~~~~~~~~lv~e~~~g~-L--------------~~~~~~~~~~l--~-----------~~--------~---------  112 (397)
                       +....+..++||+|++|. +              +..++.....+  +           ..        .         
T Consensus        98 ~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  177 (346)
T 2q83_A           98 LYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAE  177 (346)
T ss_dssp             SCEEETTEEEEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCEEEEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHH
Confidence             123467789999999873 1              12222211101  0           00        0         


Q ss_pred             --------------HHHHHHHHHHHHHHhH-------------hCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          113 --------------IKSYMQMTLKGLAFCH-------------KKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       113 --------------~~~~~~qil~aL~~lH-------------~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                                    +..+..++..++++|+             ..+++|+|+++.|||++.++.+.|+||+.+..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          178 AEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             hccCCcHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence                          1112222334566665             35799999999999998888899999998864

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.39  E-value=3.7e-07  Score=85.92  Aligned_cols=80  Identities=5%  Similarity=0.017  Sum_probs=53.2

Q ss_pred             eeeee-eecCcEEEEEEEECC------CCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCC---CCeeEEEeeeecC-
Q 015948           16 KREVL-GEGTYGVVYKAIDTK------TGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKS---PHIIELIDAFPHK-   83 (397)
Q Consensus        16 i~~~L-G~G~~g~Vy~a~~~~------~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h---p~iv~l~~~~~~~-   83 (397)
                      ..+.| +.|....+|+.....      ++..+++|....... .......+.+|+.+|+.|..   -.+.+++.+..+. 
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence            35677 888899999886430      156788997543220 00012456789999988843   3466777776554 


Q ss_pred             --CeEEEEEEcccc
Q 015948           84 --GNLHLVFEFMET   95 (397)
Q Consensus        84 --~~~~lv~e~~~g   95 (397)
                        +..|+||||++|
T Consensus       104 ~~g~~~~v~e~l~G  117 (357)
T 3ats_A          104 VLGTPFFLMDYVEG  117 (357)
T ss_dssp             TTSSCEEEEECCCC
T ss_pred             ccCCceEEEEecCC
Confidence              457899999987

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=98.08  E-value=5.6e-05  Score=64.76  Aligned_cols=97  Identities=16%  Similarity=0.074  Sum_probs=66.5

Q ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH-hCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948           96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA  174 (397)
Q Consensus        96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH-~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t  174 (397)
                      +|.+.+...+.+++|+++|.++.|.+.+|.-+- .+.-..+=+-|..|+|..+|.|-+.+ +.+.            ...
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------~~~  100 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------AGE  100 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc------------ccc
Confidence            689999999999999999999999999887762 12212333457999999999887664 1111            011


Q ss_pred             ceeeChhcccCccCCCCcchHHHHHHHHHHHHh
Q 015948          175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN  207 (397)
Q Consensus       175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~  207 (397)
                      ..+.+||...  ...+.+.=|||||+++|.-+-
T Consensus       101 ~~~~~pe~~~--~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          101 PPPVAGKLGY--SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ------CCSS--SSSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCChhhcc--ccchHHHHHHHHHHHHHHHhh
Confidence            2277888763  345678899999999999884

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.00  E-value=3.9e-05  Score=73.75  Aligned_cols=79  Identities=8%  Similarity=-0.054  Sum_probs=46.9

Q ss_pred             HhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc--CceeeChhcccCccC--CCCcchHHHHHHHHH
Q 015948          128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF--ARWYRAPELLFGAKQ--YGAGVDVWAAGCIFA  203 (397)
Q Consensus       128 H~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~--t~~y~aPE~l~~~~~--~~~~~DiwSlG~il~  203 (397)
                      +...++|+|++|.|||++.++ ++|+||+.+.... +.......+.  ...|.+|+.......  -....++.++...+|
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~-p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP-MGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW  307 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEEC-HHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCc-hHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence            456799999999999998877 9999999997642 1111111111  122566654421000  112244457777777


Q ss_pred             HHHhC
Q 015948          204 ELLNR  208 (397)
Q Consensus       204 ell~g  208 (397)
                      +++.+
T Consensus       308 ~~y~~  312 (420)
T 2pyw_A          308 NLFNK  312 (420)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.92  E-value=0.0001  Score=67.32  Aligned_cols=133  Identities=14%  Similarity=0.167  Sum_probs=75.8

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEEEEcc-c
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLVFEFM-E   94 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv~e~~-~   94 (397)
                      .+.|+.|....+|++      ..|++|+......   ......+|+.+++.+....+ .+++..+.+  .-++|+||+ +
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~---~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~   91 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTE---EYINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAG   91 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCcc---ceeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCC
Confidence            788999999999999      5688888654311   11234568888887753333 455555433  336899999 6


Q ss_pred             cC-HH-----H-------------HHHhcCCCCC-----HHHHHHHHHH--------------HHHHHHH----hH----
Q 015948           95 TD-LE-----T-------------VIRNTNIFLS-----PADIKSYMQM--------------TLKGLAF----CH----  128 (397)
Q Consensus        95 g~-L~-----~-------------~~~~~~~~l~-----~~~~~~~~~q--------------il~aL~~----lH----  128 (397)
                      |. +.     +             .++.....+.     ...+..+...              +...+..    +.    
T Consensus        92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~  171 (301)
T 3dxq_A           92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL  171 (301)
T ss_dssp             CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred             CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence            62 11     0             1111111111     1111111111              1111111    11    


Q ss_pred             hCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948          129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus       129 ~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      ...++|+|+.+.||+ ..++.+.|+||..+...
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            124899999999999 56778999999988753

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.83  E-value=8.1e-05  Score=68.46  Aligned_cols=73  Identities=21%  Similarity=0.133  Sum_probs=56.6

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEEEEEc
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      -.+.|+.|....+|+...  .+..|++|+-...     ....+..|...|+.|.   ...+.+++.+....+..|+||||
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~  112 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA  112 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence            356789999999999864  4678889986532     1335678999998884   35677888888778899999999


Q ss_pred             ccc
Q 015948           93 MET   95 (397)
Q Consensus        93 ~~g   95 (397)
                      ++|
T Consensus       113 l~G  115 (312)
T 3jr1_A          113 LNK  115 (312)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            986

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.74  E-value=0.00019  Score=66.55  Aligned_cols=33  Identities=27%  Similarity=0.370  Sum_probs=28.4

Q ss_pred             hCCccccCCCCCcEEEccC----CcEEEeeeccceee
Q 015948          129 KKWVLHRDMKPNNLLIGSH----GQLKLADFGLARIF  161 (397)
Q Consensus       129 ~~~ivHrDlkp~NILl~~~----~~~kl~DFG~a~~~  161 (397)
                      ...++|+|+.+.|||++.+    +.+.|+||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            3469999999999999874    67999999998754

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.70  E-value=7.8e-05  Score=68.71  Aligned_cols=138  Identities=14%  Similarity=0.061  Sum_probs=76.9

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEee------eecCCeEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDA------FPHKGNLHL   88 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~------~~~~~~~~l   88 (397)
                      .+.|+.|....+|++... + ..+++|......    ....+..|+.+++.|....  +.+++..      ....+..++
T Consensus        27 ~~~i~~G~~n~~~~v~~~-~-g~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~  100 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTT-K-DPLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAA  100 (322)
T ss_dssp             EEEECC---EEEEEEEES-S-CCEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEE
T ss_pred             eeccCCCcccceEEEEeC-C-ccEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEE
Confidence            455777888999998653 3 368899876421    1234557888888774222  2333321      123466789


Q ss_pred             EEEccccCH---------------HHHHHhc--CCC------CCHHHHHH---------------HHHHHHHHHHHhHh-
Q 015948           89 VFEFMETDL---------------ETVIRNT--NIF------LSPADIKS---------------YMQMTLKGLAFCHK-  129 (397)
Q Consensus        89 v~e~~~g~L---------------~~~~~~~--~~~------l~~~~~~~---------------~~~qil~aL~~lH~-  129 (397)
                      +++|++|..               +..++..  ...      .....-..               +...+...++.+.+ 
T Consensus       101 l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~  180 (322)
T 2ppq_A          101 LISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAH  180 (322)
T ss_dssp             EEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhh
Confidence            999998731               1112221  100      11110000               00113344455542 


Q ss_pred             ------CCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          130 ------KWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       130 ------~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                            .+++|+|+++.|||++.++.+.|+||+.+..
T Consensus       181 ~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          181 WPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             CCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence                  4699999999999998776568999998864

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.69  E-value=0.0001  Score=71.03  Aligned_cols=72  Identities=11%  Similarity=0.135  Sum_probs=49.4

Q ss_pred             eeeeeeecCcEEEEEEEECC-------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEE
Q 015948           16 KREVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLH   87 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~-------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~   87 (397)
                      -.+.|+.|....||++....       .+..|++|+....    .....+.+|..+++.|...++ .++++.+.+    .
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g  148 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----G  148 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence            35678888899999997653       2578999987321    111345579999998854344 566766643    2


Q ss_pred             EEEEcccc
Q 015948           88 LVFEFMET   95 (397)
Q Consensus        88 lv~e~~~g   95 (397)
                      +|+||++|
T Consensus       149 ~v~e~l~G  156 (429)
T 1nw1_A          149 RLEEYIPS  156 (429)
T ss_dssp             EEECCCCE
T ss_pred             EEEEEeCC
Confidence            89999986

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.58  E-value=0.00047  Score=65.10  Aligned_cols=137  Identities=12%  Similarity=0.135  Sum_probs=80.8

Q ss_pred             eeeeeecCcEEEEEEEECC-------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCCeEEE
Q 015948           17 REVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNLHL   88 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~-------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~~~l   88 (397)
                      .+.|..|-...+|++....       +++.|++|+...  .. .......+|..+++.|..-+ ..++++.+.++    +
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~  127 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--IL-QGVDSLVLESVMFAILAERSLGPQLYGVFPEG----R  127 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----E
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--cc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----c
Confidence            4567778888899987542       357899998522  11 12234558999998885322 35667666542    8


Q ss_pred             EEEccccCHH------------------HHHHhcCCC----CC--HHHHHHHHHHHHH-------------------HHH
Q 015948           89 VFEFMETDLE------------------TVIRNTNIF----LS--PADIKSYMQMTLK-------------------GLA  125 (397)
Q Consensus        89 v~e~~~g~L~------------------~~~~~~~~~----l~--~~~~~~~~~qil~-------------------aL~  125 (397)
                      ||||++|..+                  ..++.....    ..  ...+..|..++-.                   .++
T Consensus       128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~  207 (379)
T 3feg_A          128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG  207 (379)
T ss_dssp             EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred             EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence            9999987210                  111222111    11  3455556554422                   123


Q ss_pred             HhH----h----CCccccCCCCCcEEEccC----CcEEEeeecccee
Q 015948          126 FCH----K----KWVLHRDMKPNNLLIGSH----GQLKLADFGLARI  160 (397)
Q Consensus       126 ~lH----~----~~ivHrDlkp~NILl~~~----~~~kl~DFG~a~~  160 (397)
                      .|.    .    ..++|+|+.+.|||++.+    +.+.|+||..|..
T Consensus       208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            332    2    259999999999999876    7899999998864

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.55  E-value=0.001  Score=60.22  Aligned_cols=80  Identities=11%  Similarity=0.024  Sum_probs=54.9

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC---CCeeEEEeeeecCCe
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIELIDAFPHKGN   85 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~l~~~~~~~~~   85 (397)
                      .+..+..-.+.+|.|..+.||+... .+|+.|++|+-....  ......+..|+..|+.|..   --+.+++...  .  
T Consensus        12 l~G~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--   84 (288)
T 3f7w_A           12 LTGREVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--   84 (288)
T ss_dssp             HHCCCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--
T ss_pred             hcCCCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEecc--C--
Confidence            3455667788999999999999975 478899999764332  1223346689999999843   2244555442  2  


Q ss_pred             EEEEEEcccc
Q 015948           86 LHLVFEFMET   95 (397)
Q Consensus        86 ~~lv~e~~~g   95 (397)
                      -++||||+.+
T Consensus        85 ~~lv~e~l~~   94 (288)
T 3f7w_A           85 RTLAMEWVDE   94 (288)
T ss_dssp             TEEEEECCCC
T ss_pred             ceEEEEeecc
Confidence            3689999874

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.55  E-value=0.00017  Score=67.87  Aligned_cols=73  Identities=11%  Similarity=0.165  Sum_probs=43.8

Q ss_pred             eeeeeeecCcEEEEEEEECC--------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCCeE
Q 015948           16 KREVLGEGTYGVVYKAIDTK--------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNL   86 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~--------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~~   86 (397)
                      -.+.|+.|....+|++....        .+..|++|+......   .......|..+++.+...+ +.++++.+.  +  
T Consensus        37 ~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~~~~E~~~l~~L~~~g~~P~~~~~~~--~--  109 (369)
T 3c5i_A           37 RVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---ELYNTISEFEVYKTMSKYKIAPQLLNTFN--G--  109 (369)
T ss_dssp             EEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---GTSCHHHHHHHHHHHHHTTSSCCEEEEET--T--
T ss_pred             EEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---ceecHHHHHHHHHHHHhcCCCCceEEecC--C--
Confidence            35677888889999997643        136888887643211   1113457888888885434 346665542  2  


Q ss_pred             EEEEEcccc
Q 015948           87 HLVFEFMET   95 (397)
Q Consensus        87 ~lv~e~~~g   95 (397)
                      ++||||++|
T Consensus       110 ~~v~e~i~G  118 (369)
T 3c5i_A          110 GRIEEWLYG  118 (369)
T ss_dssp             EEEEECCCS
T ss_pred             cEEEEEecC
Confidence            589999987

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.53  E-value=0.0014  Score=63.49  Aligned_cols=73  Identities=18%  Similarity=0.191  Sum_probs=48.3

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEEEEccc
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLVFEFME   94 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv~e~~~   94 (397)
                      -.+.|+.|....+|++.....+..|++|+.....  . ......+|..+++.|...++ .++++.+. + .  +||||++
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~-~-G--~v~e~I~  184 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--D-EIINREREKKISCILYNKNIAKKIYVFFT-N-G--RIEEFMD  184 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-C--C-SCSCHHHHHHHHHHHTTSSSBCCEEEEET-T-E--EEEECCC
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--h-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC-C-e--EEEEeeC
Confidence            3567888989999999876445788899764321  1 11123579999999976555 56777763 2 2  5999998


Q ss_pred             c
Q 015948           95 T   95 (397)
Q Consensus        95 g   95 (397)
                      |
T Consensus       185 G  185 (458)
T 2qg7_A          185 G  185 (458)
T ss_dssp             S
T ss_pred             C
Confidence            6

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.50  E-value=0.00095  Score=61.49  Aligned_cols=136  Identities=16%  Similarity=0.157  Sum_probs=77.9

Q ss_pred             eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEee-----eecCCeEEEEE
Q 015948           18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDA-----FPHKGNLHLVF   90 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~-----~~~~~~~~lv~   90 (397)
                      ..|+ |....||++.. .+|+.+++|.......   ....+..|+.+++.|....  +.+++..     ...++..++||
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~  106 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF  106 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence            4566 78889998743 3466799998763321   2234567888888874222  3444432     22356778999


Q ss_pred             EccccC------HH---------HHHHhc--CC------CCCHHHH----------------------HHHHHHHHHHHH
Q 015948           91 EFMETD------LE---------TVIRNT--NI------FLSPADI----------------------KSYMQMTLKGLA  125 (397)
Q Consensus        91 e~~~g~------L~---------~~~~~~--~~------~l~~~~~----------------------~~~~~qil~aL~  125 (397)
                      +|++|.      ..         ..++..  ..      .++....                      ...+..++..++
T Consensus       107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~  186 (328)
T 1zyl_A          107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT  186 (328)
T ss_dssp             ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence            999872      11         111111  00      1111110                      111122222222


Q ss_pred             Hh----HhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          126 FC----HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       126 ~l----H~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      -+    ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            22    234589999999999998 4 799999998864

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.17  E-value=0.0043  Score=57.56  Aligned_cols=32  Identities=19%  Similarity=0.390  Sum_probs=28.4

Q ss_pred             CCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948          130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus       130 ~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                      ..++|+|+.+.||+++.++.+.|+||+.+...
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            46999999999999998888999999988753

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.70  E-value=0.0061  Score=58.31  Aligned_cols=73  Identities=12%  Similarity=0.185  Sum_probs=47.2

Q ss_pred             eeeeeeecCcEEEEEEEECCC-------CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCCeEE
Q 015948           16 KREVLGEGTYGVVYKAIDTKT-------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNLH   87 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~-------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~~~   87 (397)
                      -.+.|..|-...+|++.....       +..|++|+.....   .......+|..+++.+...+ ..++++.+.  +  +
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~  146 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADFP--E--G  146 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--E
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--C
Confidence            356677788889999976521       5789999854321   11223457999888885323 345555442  2  6


Q ss_pred             EEEEcccc
Q 015948           88 LVFEFMET   95 (397)
Q Consensus        88 lv~e~~~g   95 (397)
                      +||||++|
T Consensus       147 ~I~efI~G  154 (424)
T 3mes_A          147 RIEEFIDG  154 (424)
T ss_dssp             EEEECCCS
T ss_pred             EEEEEeCC
Confidence            88999987

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.57  E-value=0.051  Score=51.50  Aligned_cols=29  Identities=28%  Similarity=0.430  Sum_probs=25.1

Q ss_pred             ccccCCCCCcEEEc------cCCcEEEeeecccee
Q 015948          132 VLHRDMKPNNLLIG------SHGQLKLADFGLARI  160 (397)
Q Consensus       132 ivHrDlkp~NILl~------~~~~~kl~DFG~a~~  160 (397)
                      ++|+|+.+.|||+.      .++.+.++||.+|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            68999999999993      456799999999864

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=88.60  E-value=0.029  Score=54.32  Aligned_cols=62  Identities=15%  Similarity=0.078  Sum_probs=16.4

Q ss_pred             eeeeeeeecCcEEEEEEEECCCCcEEEE------EEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEee
Q 015948           15 LKREVLGEGTYGVVYKAIDTKTGQTVAI------KKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA   79 (397)
Q Consensus        15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~ai------K~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~   79 (397)
                      .+.+.||   ||.||++........||+      |..............+.+|..+++.++|||+++.+.+
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f  212 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNF  212 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcce
Confidence            3456676   999999987655567888      6654433333333456789999999999999988664

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=86.45  E-value=1.8  Score=36.95  Aligned_cols=84  Identities=14%  Similarity=0.055  Sum_probs=60.2

Q ss_pred             CCCCeeEEEeeeecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC
Q 015948           69 KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH  147 (397)
Q Consensus        69 ~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~  147 (397)
                      .||++  -...-.+++.+.+.++.-. +--+..+++    ++....+.++.+|+.... -|...-+|--|.|+||+++.+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~----~~~~eKlrll~nl~~L~~-~~~~~r~tf~l~P~NL~f~~~  120 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK----TTLLSRIRAAIHLVSKVK-HHSARRLIFIVCPENLMFNRA  120 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT----SCHHHHHHHHHHHHHHHS-SCCSSSEECCCCGGGEEECTT
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh----cCHHHHHHHHHHHHHHHH-HhhhCceeEEEeCceEEEeCC
Confidence            57888  3344467777777777764 333445544    778898999999876555 133445677899999999999


Q ss_pred             CcEEEeeeccce
Q 015948          148 GQLKLADFGLAR  159 (397)
Q Consensus       148 ~~~kl~DFG~a~  159 (397)
                      +.++|.-.|+-.
T Consensus       121 ~~p~i~hRGi~~  132 (219)
T 4ano_A          121 LEPFFLHVGVKE  132 (219)
T ss_dssp             CCEEESCCEETT
T ss_pred             CcEEEEEcCCcc
Confidence            999998887653

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=80.44  E-value=1.8  Score=36.74  Aligned_cols=91  Identities=13%  Similarity=0.183  Sum_probs=62.7

Q ss_pred             HHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCC
Q 015948           61 EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKP  139 (397)
Q Consensus        61 E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp  139 (397)
                      |+.+|.. .||+++.. .+-++.+.+.+.++.-+ +--+..+++    ++....+.++.+|+....++  ..-+|--|.|
T Consensus        36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~----~~~~eKlr~l~ni~~l~~~~--~~r~tf~L~P  107 (215)
T 4ann_A           36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS----FTKNEKLRYLLNIKNLEEVN--RTRYTFVLAP  107 (215)
T ss_dssp             GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG----SCHHHHHHHHHHGGGGGGGG--GSSEECCCSG
T ss_pred             HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh----cCHHHHHHHHHHHHHHHHHh--cCceEEEEec
Confidence            4444433 57888866 45556666666666554 323333444    67888899999988776444  3346778999


Q ss_pred             CcEEEccCCcEEEeeeccce
Q 015948          140 NNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus       140 ~NILl~~~~~~kl~DFG~a~  159 (397)
                      +||+++.++.+++.--|+-.
T Consensus       108 ~NL~f~~~~~p~i~~RGik~  127 (215)
T 4ann_A          108 DELFFTRDGLPIAKTRGLQN  127 (215)
T ss_dssp             GGEEECTTSCEEESCCEETT
T ss_pred             ceEEEcCCCCEEEEEccCcc
Confidence            99999999999998777643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	397
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-103
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-89
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-89
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-88
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-87
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-82
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-82
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-78
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-78
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-77
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-77
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-76
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-76
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-75
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-75
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-74
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-73
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-72
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-72
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-72
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-70
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-70
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-70
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-70
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-68
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-67
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-63
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-62
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-62
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-61
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-61
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-60
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-57
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-56
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-56
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-55
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-54
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-54
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-54
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-53
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-53
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-53
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-53
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-52
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-52
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-51
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-51
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-51
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-50
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-50
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-49
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-48
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-48
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-47
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-47
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-47
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-47
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-47
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-46
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-43
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-43
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-42
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-27

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  306 bits (785), Expect = e-103
 Identities = 175/295 (59%), Positives = 221/295 (74%), Gaps = 3/295 (1%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHII 74
           + LGEG +  VYKA D  T Q VAIKKI+LG +   K+G+N TALREIKLL+EL  P+II
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 75  ELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134
            L+DAF HK N+ LVF+FMETDLE +I++ ++ L+P+ IK+YM MTL+GL + H+ W+LH
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123

Query: 135 RDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVD 194
           RD+KPNNLL+  +G LKLADFGLA+ FGSP+R +THQV  RWYRAPELLFGA+ YG GVD
Sbjct: 124 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVD 183

Query: 195 VWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           +WA GCI AELL R PFL G SD+DQL +IF   GT T  QWPD+  LPDYV ++     
Sbjct: 184 MWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI 243

Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP 309
           PL  +F +A DD LDL+  +F ++P ARITA QAL+ +YFS+ P PT   +LPRP
Sbjct: 244 PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRP 298

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  269 bits (688), Expect = 3e-89
 Identities = 133/284 (46%), Positives = 180/284 (63%), Gaps = 2/284 (0%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           ++Y   E +GEGTYGVVYKA +   G+T A+KKIRL K+ EG+  T +REI +LKELK  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I++L D    K  L LVFE ++ DL+ ++      L     KS++   L G+A+CH + 
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI   G+LK+ADFGLAR FG P R++TH++   WYRAP++L G+K+Y  
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180

Query: 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQY 250
            +D+W+ GCIFAE++N  P   G S+ DQL +IF   GT     WP++  LP Y   +  
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
               P  S      +  +DLLSKM   DP  RITA+QALEH YF
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  269 bits (689), Expect = 3e-89
 Identities = 141/297 (47%), Positives = 184/297 (61%), Gaps = 2/297 (0%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + + K E +GEGTYGVVYKA +  TG+ VA+KKIRL  + EGV  TA+REI LLKEL  P
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIR-NTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I++L+D    +  L+LVFEF+  DL+  +  +    +    IKSY+   L+GLAFCH  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            VLHRD+KP NLLI + G +KLADFGLAR FG P R +TH+V   WYRAPE+L G K Y 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY-VEYQ 249
             VD+W+ GCIFAE++ RR    G S+IDQL +IF   GT     WP +  +PDY   + 
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241

Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKL 306
             A      + P   +D   LLS+M  YDP  RI+A+ AL H +F     P    +L
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL 298

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  268 bits (685), Expect = 2e-88
 Identities = 125/308 (40%), Positives = 177/308 (57%), Gaps = 16/308 (5%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
            +Y K   +G+GT+G V+KA   KTGQ VA+KK+ +  +KEG   TALREIK+L+ LK  
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 72  HIIELIDAF--------PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +++ LI+            KG+++LVF+F E DL  ++ N  +  + ++IK  MQM L G
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG----SPDRRFTHQVFARWYRA 179
           L + H+  +LHRDMK  N+LI   G LKLADFGLAR F     S   R+T++V   WYR 
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 189

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PELL G + YG  +D+W AGCI AE+  R P +QG+++  QL  I    G+ TP  WP++
Sbjct: 190 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 249

Query: 240 AYLPDYVEYQYVAAPPL----RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                Y + + V         R         ALDL+ K+   DP  RI +  AL H +F 
Sbjct: 250 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 309

Query: 296 SAPLPTEP 303
           S P+P++ 
Sbjct: 310 SDPMPSDL 317

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  264 bits (674), Expect = 5e-87
 Identities = 139/291 (47%), Positives = 182/291 (62%), Gaps = 2/291 (0%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
            +Y K E +GEGTYG V+KA + +T + VA+K++RL    EGV  +ALREI LLKELK  
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           +I+ L D       L LVFEF + DL+    + N  L P  +KS++   LKGL FCH + 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGA 191
           VLHRD+KP NLLI  +G+LKLA+FGLAR FG P R ++ +V   WYR P++LFGAK Y  
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181

Query: 192 GVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-Q 249
            +D+W+AGCIFAEL N  RP   G+   DQL +IF   GT T  QWP +  LPDY  Y  
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241

Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
           Y A   L ++ P  +    DLL  +   +P  RI+A++AL+H YFS    P
Sbjct: 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  252 bits (645), Expect = 8e-82
 Identities = 80/337 (23%), Positives = 137/337 (40%), Gaps = 31/337 (9%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V D Y   E LG G +GVV++  +  TG   A K +    + +       +EI+ +  L+
Sbjct: 24  VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV--RKEIQTMSVLR 81

Query: 70  SPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            P ++ L DAF     + +++EFM   +L   + + +  +S  +   YM+   KGL   H
Sbjct: 82  HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 141

Query: 129 KKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
           +   +H D+KP N++  +    +LKL DFGL      P +          + APE+  G 
Sbjct: 142 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEG- 199

Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           K  G   D+W+ G +   LL+      G +D + L  + +       S +  +       
Sbjct: 200 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI------- 252

Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKL 306
                            S+D  D + K+   DP  R+T  QALEH + +    P   +++
Sbjct: 253 -----------------SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 295

Query: 307 PRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDRE 343
           P     +   +        P  L P  +       R+
Sbjct: 296 PSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRK 332

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  252 bits (644), Expect = 8e-82
 Identities = 107/311 (34%), Positives = 152/311 (48%), Gaps = 14/311 (4%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V  RY     +GEG YG+V  A D      VAIKKI   + +       LREIK+L   +
Sbjct: 6   VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFR 64

Query: 70  SPHIIELIDAF-----PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +II + D           +++LV   M  DL  +++  +  LS   I  ++   L+GL
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGL 122

Query: 125 AFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FTHQVFARWYRAPE 181
            + H   VLHRD+KP+NLL+ +   LK+ DFGLAR+           T  V  RWYRAPE
Sbjct: 123 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 182

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           ++  +K Y   +D+W+ GCI AE+L+ RP   G   +DQL  I    G+ +      +  
Sbjct: 183 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 242

Query: 242 LPDY---VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
           L      +   +    P   LFP+A   ALDLL KM T++P  RI  +QAL H Y     
Sbjct: 243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 302

Query: 299 LPTEPNKLPRP 309
            P++      P
Sbjct: 303 DPSDEPIAEAP 313

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  243 bits (620), Expect = 4e-78
 Identities = 102/329 (31%), Positives = 164/329 (49%), Gaps = 22/329 (6%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
            +     Y   +V+G G++GVVY+A    +G+ VAIKK+   K+ +       RE+++++
Sbjct: 15  DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMR 68

Query: 67  ELKSPHIIELIDAFPHKGN------LHLVFEFMETDLETVIRN---TNIFLSPADIKSYM 117
           +L   +I+ L   F   G       L+LV +++   +  V R+       L    +K YM
Sbjct: 69  KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128

Query: 118 QMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFTHQVFARW 176
               + LA+ H   + HRD+KP NLL+      LKL DFG A+     +   ++ + +R+
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY 187

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
           YRAPEL+FGA  Y + +DVW+AGC+ AELL  +P   G S +DQL +I    GT T  Q 
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
            ++       ++  + A P   +F P    +A+ L S++  Y P AR+T  +A  H +F 
Sbjct: 248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307

Query: 296 SAPLPTEPNKLPRPATKRASKASDFNPQE 324
               P     +  P  +      +F  QE
Sbjct: 308 ELRDPN----VKLPNGRDTPALFNFTTQE 332

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  242 bits (618), Expect = 5e-78
 Identities = 103/310 (33%), Positives = 154/310 (49%), Gaps = 14/310 (4%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V   Y   + +G G YG V  A+D +TG  VAIKK+    Q E     A RE++LLK +
Sbjct: 15  EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 74

Query: 69  KSPHIIELIDAFPHKG------NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           +  ++I L+D F          + +LV  FM TDL  ++++    L    I+  +   LK
Sbjct: 75  RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQMLK 132

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 133 GLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMTGYVVTRWYRAPEV 189

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +    +Y   VD+W+ GCI AE++  +   +GS  +DQL +I    GT        L   
Sbjct: 190 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD 249

Query: 243 PDYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
                      +      S+  +AS  A++LL KM   D + R+TA +AL H YF S   
Sbjct: 250 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 309

Query: 300 PTEPNKLPRP 309
             +  ++ + 
Sbjct: 310 TEDEPQVQKY 319

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  241 bits (615), Expect = 1e-77
 Identities = 74/303 (24%), Positives = 119/303 (39%), Gaps = 21/303 (6%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D + K   LG G  GVV+K     +G  +A K I L  +    N   +RE+++L E  SP
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-QIIRELQVLHECNSP 64

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-KK 130
           +I+    AF   G + +  E M+      +      +    +       +KGL +   K 
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            ++HRD+KP+N+L+ S G++KL DFG++      D      V  R Y +PE L G   Y 
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQG-THYS 181

Query: 191 AGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY- 248
              D+W+ G    E+   R P     +   +L       G A  +             Y 
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241

Query: 249 --------------QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
                           V  PP +      S +  D ++K    +P  R   +Q + H + 
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301

Query: 295 SSA 297
             +
Sbjct: 302 KRS 304

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  237 bits (606), Expect = 7e-77
 Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 32/289 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           D +     LG+G +G VYKA + +T    A K I    ++E  ++  + EI +L     P
Sbjct: 12  DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHP 69

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I++L+DAF ++ NL ++ EF     ++ V+      L+ + I+   + TL  L + H  
Sbjct: 70  NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 129

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG----A 186
            ++HRD+K  N+L    G +KLADFG++       +R    +   ++ APE++       
Sbjct: 130 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 189

Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           + Y    DVW+ G    E+    P     + +  L KI                      
Sbjct: 190 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK-------------------- 229

Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295
                + PP  +     S +  D L K    +  AR T  Q L+H + +
Sbjct: 230 -----SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 273

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  239 bits (611), Expect = 1e-76
 Identities = 81/342 (23%), Positives = 142/342 (41%), Gaps = 36/342 (10%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
             V D Y   E LG G +GVV++ ++  TG+    K I      +   +T   EI ++ +
Sbjct: 25  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQ 82

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           L  P +I L DAF  K  + L+ EF+   +L   I   +  +S A++ +YM+   +GL  
Sbjct: 83  LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 142

Query: 127 CHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
            H+  ++H D+KP N++  +     +K+ DFGLA    +PD           + APE++ 
Sbjct: 143 MHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL-NPDEIVKVTTATAEFAAPEIVD 201

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             +  G   D+WA G +   LL+      G  D++ L  +           +  +     
Sbjct: 202 R-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV----- 255

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF----SSAPLP 300
                              S +A D +  +   +P+ R+T   ALEH +     S+    
Sbjct: 256 -------------------SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSR 296

Query: 301 TEPNKLPRPATKRASKASDFN-PQEGPTVLSPPRKTRRVMPD 341
              ++  +   K   K +D+  PQ     ++     R+  P 
Sbjct: 297 IPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQ 338

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  237 bits (605), Expect = 1e-76
 Identities = 113/295 (38%), Positives = 160/295 (54%), Gaps = 13/295 (4%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
            +Y     +GEG YG V+KA D K  G+ VA+K++R+   +EG+  + +RE+ +L+ L++
Sbjct: 7   QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 66

Query: 71  ---PHIIELIDAF-----PHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTL 121
              P+++ L D         +  L LVFE ++ D    + +     +    IK  M   L
Sbjct: 67  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 126

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
           +GL F H   V+HRD+KP N+L+ S GQ+KLADFGLARI+ S     T  V   WYRAPE
Sbjct: 127 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAPE 185

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +L     Y   VD+W+ GCIFAE+  R+P  +GSSD+DQLGKI    G      WP    
Sbjct: 186 VLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
           LP    +   +A P+        +   DLL K  T++P  RI+A  AL H YF  
Sbjct: 245 LPRQA-FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  235 bits (600), Expect = 2e-75
 Identities = 64/335 (19%), Positives = 131/335 (39%), Gaps = 35/335 (10%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE 67
           K++ ++Y+  E LG G +G+V++ ++T + +T   K +++    +       +EI +L  
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV---LVKKEISILNI 57

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
            +  +I+ L ++F     L ++FEF+   D+   I  +   L+  +I SY+    + L F
Sbjct: 58  ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117

Query: 127 CHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
            H   + H D++P N++  +     +K+ +FG AR     D          +Y       
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH-- 175

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
                    D+W+ G +   LL+        ++   +  I  A  T     + ++     
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI----- 230

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304
                              S +A+D + ++   + K+R+TA +AL+H +           
Sbjct: 231 -------------------SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTK 271

Query: 305 KLPRPATKRASKA---SDFNPQEGPTVLSPPRKTR 336
            +     +R        D N       +S     R
Sbjct: 272 VIRTLKHRRYYHTLIKKDLNMVVSAARISCGGAIR 306

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  232 bits (592), Expect = 7e-75
 Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 29/291 (9%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           + +   + LGEG YG V  A++  T + VA+K + + +  +       +EI + K L   
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHE 63

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131
           ++++           +L  E+            +I +   D + +    + G+ + H   
Sbjct: 64  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123

Query: 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAPELLFGAKQY 189
           + HRD+KP NLL+     LK++DFGLA +F   + +R          Y APELL   + +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183

Query: 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249
              VDVW+ G +   +L         SD  Q    +                        
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW------------------------ 219

Query: 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300
                   + +       L LL K+   +P ARIT     + R+++  PL 
Sbjct: 220 -KEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK-PLK 268

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  231 bits (589), Expect = 3e-74
 Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 35/308 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
            +Y + E +G+G  G VY A+D  TGQ VAI+++ L +Q +      + EI +++E K+P
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNP 77

Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I+  +D++     L +V E++    L  V+  T +      I +  +  L+ L F H  
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 135

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V+HRD+K +N+L+G  G +KL DFG          + +  V   ++ APE++   K YG
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYG 194

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VD+W+ G +  E++   P     + +  L  I    GT        L           
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPELQNPEKL----------- 242

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPA 310
                        S    D L++    D + R +A++ L+H++   A    +P     P 
Sbjct: 243 -------------SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA----KPLSSLTPL 285

Query: 311 TKRASKAS 318
              A +A+
Sbjct: 286 IAAAKEAT 293

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  231 bits (589), Expect = 1e-73
 Identities = 107/308 (34%), Positives = 149/308 (48%), Gaps = 14/308 (4%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G YG V  A DTKTG  VA+KK+    Q         RE++LLK +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 69  KSPHIIELIDAFPHKGNLH------LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
           K  ++I L+D F    +L       LV   M  DL  +++     L+   ++  +   L+
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILR 132

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           GL + H   ++HRD+KP+NL +    +LK+ DFGLAR     D   T  V  RWYRAPE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEI 189

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           +     Y   VD+W+ GCI AELL  R    G+  IDQL  I    GT        ++  
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249

Query: 243 PDYVEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299
                 Q +   P     ++F  A+  A+DLL KM   D   RITA QAL H YF+    
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309

Query: 300 PTEPNKLP 307
           P +     
Sbjct: 310 PDDEPVAD 317

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  227 bits (580), Expect = 1e-72
 Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 33/319 (10%)

Query: 7   SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           ++ + D Y  R+VLG G +  V  A D +T + VAIK I   K  EG   +   EI +L 
Sbjct: 4   AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAK-KALEGKEGSMENEIAVLH 62

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           ++K P+I+ L D +   G+L+L+ + +   +L   I     F +  D    +   L  + 
Sbjct: 63  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVK 121

Query: 126 FCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
           + H   ++HRD+KP NLL  S     ++ ++DFGL+++   P    +       Y APE+
Sbjct: 122 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME-DPGSVLSTACGTPGYVAPEV 180

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
           L   K Y   VD W+ G I   LL   P     +D     +I  A        W D+   
Sbjct: 181 LAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI--- 236

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS-SAPLPT 301
                                SD A D +  +   DP+ R T +QAL+H + +    L  
Sbjct: 237 ---------------------SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDK 275

Query: 302 EPNKLPRPATKRASKASDF 320
             ++      K+    S +
Sbjct: 276 NIHQSVSEQIKKNFAKSKW 294

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  225 bits (574), Expect = 2e-72
 Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 32/286 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKS 70
           + +     LG+G +G VY A + ++   +A+K +   + +K GV     RE+++   L+ 
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           P+I+ L   F     ++L+ E+                      +Y+      L++CH K
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 125

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V+HRD+KP NLL+GS G+LK+ADFG +    +P  R T       Y  PE++ G + + 
Sbjct: 126 RVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG-RMHD 182

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VD+W+ G +  E L  +P  + ++  +   +I     T            PD+V    
Sbjct: 183 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------FPDFV---- 227

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
                        ++ A DL+S++  ++P  R   ++ LEH + ++
Sbjct: 228 -------------TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  226 bits (577), Expect = 5e-72
 Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 25/300 (8%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-S 70
           D Y     LG G Y  V++AI+    + V +K ++  K+K+       REIK+L+ L+  
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGG 89

Query: 71  PHIIELIDAF--PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           P+II L D    P      LVFE +  TD + + +     L+  DI+ YM   LK L +C
Sbjct: 90  PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 145

Query: 128 HKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
           H   ++HRD+KP+N++I   H +L+L D+GLA  +  P + +  +V +R+++ PELL   
Sbjct: 146 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 204

Query: 187 KQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245
           + Y   +D+W+ GC+ A ++ R+ PF  G  + DQL +I    GT     + D   +   
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264

Query: 246 VEYQYVAAPPLRSLFPS---------ASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296
             +  +     R  +            S +ALD L K+  YD ++R+TA++A+EH YF +
Sbjct: 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  219 bits (560), Expect = 4e-70
 Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 40/297 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-------GKQKEGVNFTALREIKL 64
           + Y  +E+LG G   VV + I   T +  A+K I +        ++ + +    L+E+ +
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 65  LKELKS-PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK 122
           L+++   P+II+L D +       LVF+ M+  +L   +    + LS  + +  M+  L+
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLE 121

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182
            +   HK  ++HRD+KP N+L+     +KL DFG +     P  +         Y APE+
Sbjct: 122 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEI 180

Query: 183 LFGA-----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           +  +       YG  VD+W+ G I   LL   P       +  L  I +        +W 
Sbjct: 181 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 240

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
           D                         SD   DL+S+     P+ R TA++AL H +F
Sbjct: 241 DY------------------------SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 273

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  221 bits (563), Expect = 5e-70
 Identities = 76/327 (23%), Positives = 131/327 (40%), Gaps = 33/327 (10%)

Query: 1   MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRL-GKQKEGVNFTAL 59
           +AE+         +     +G G++G VY A D +  + VAIKK+   GKQ        +
Sbjct: 4   VAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII 63

Query: 60  REIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQM 119
           +E++ L++L+ P+ I+    +  +    LV E+       ++      L   +I +    
Sbjct: 64  KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHG 123

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
            L+GLA+ H   ++HRD+K  N+L+   G +KL DFG A I           V   ++ A
Sbjct: 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMA 179

Query: 180 PELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
           PE++      QY   VDVW+ G    EL  R+P L   + +  L  I          Q  
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA---------QNE 230

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297
             A    +                  S+   + +       P+ R T++  L+HR+    
Sbjct: 231 SPALQSGHW-----------------SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273

Query: 298 PLPTEPNKLPRPATKRASKASDFNPQE 324
             PT    L +       +  +   ++
Sbjct: 274 RPPTVIMDLIQRTKDAVRELDNLQYRK 300

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  222 bits (566), Expect = 5e-70
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 25/323 (7%)

Query: 5   DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL 64
           D +  V  RY   + +G G  G+V  A D    + VAIKK+    Q +     A RE+ L
Sbjct: 10  DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69

Query: 65  LKELKSPHIIELIDAFPHKG------NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQ 118
           +K +   +II L++ F  +       +++LV E M+ +L  VI+          +   + 
Sbjct: 70  MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL---DHERMSYLLY 126

Query: 119 MTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYR 178
             L G+   H   ++HRD+KP+N+++ S   LK+ DFGLAR  G      T  V  R+YR
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYR 185

Query: 179 APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238
           APE++ G       VD+W+ GCI  E++  +    G   IDQ  K+    GT  P     
Sbjct: 186 APEVILGMGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244

Query: 239 L-AYLPDYVEYQ-YVAAPPLRSLFPSA------------SDDALDLLSKMFTYDPKARIT 284
           L   + +YVE +   A      LFP +            +  A DLLSKM   DP  RI+
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304

Query: 285 AQQALEHRYFSSAPLPTEPNKLP 307
              AL+H Y +    P E    P
Sbjct: 305 VDDALQHPYINVWYDPAEVEAPP 327

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  218 bits (557), Expect = 9e-70
 Identities = 73/294 (24%), Positives = 115/294 (39%), Gaps = 39/294 (13%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS 70
           A+ Y     +G G+YG   K      G+ +  K++  G   E      + E+ LL+ELK 
Sbjct: 3   AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 62

Query: 71  PHIIELIDAF--PHKGNLHLVFEFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGL 124
           P+I+   D         L++V E+ E  DL +VI        +L    +   M      L
Sbjct: 63  PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122

Query: 125 AFCHKK-----WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
             CH++      VLHRD+KP N+ +     +KL DFGLARI           V   +Y +
Sbjct: 123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 182

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PE +     Y    D+W+ GC+  EL    P     S  +  GKI               
Sbjct: 183 PEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--------------- 226

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293
                            R +    SD+  +++++M       R + ++ LE+  
Sbjct: 227 ------------REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  216 bits (552), Expect = 1e-68
 Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 34/299 (11%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA----LREIK 63
           + V D Y   E LG G + VV K  +  TG   A K I+  + K      +     RE+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 64  LLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKG 123
           +LKE++ P++I L + + +K ++ L+ E +              L+  +   +++  L G
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125

Query: 124 LAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLARIFGSPDRRFTHQVFARWYRA 179
           + + H   + H D+KP N+++        ++K+ DFGLA         F +      + A
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNEFKNIFGTPEFVA 184

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PE++   +  G   D+W+ G I   LL+      G +  + L  + A         + + 
Sbjct: 185 PEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298
                                   S  A D + ++   DPK R+T Q +L+H +     
Sbjct: 244 ------------------------SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  212 bits (541), Expect = 4e-67
 Identities = 64/298 (21%), Positives = 109/298 (36%), Gaps = 38/298 (12%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLK 66
           KK  + +   ++LGEG++  V  A +  T +  AIK +      KE       RE  ++ 
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
            L  P  ++L   F     L+    + +                   + Y    +  L +
Sbjct: 64  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 123

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLF 184
            H K ++HRD+KP N+L+     +++ DFG A++     +  R    V    Y +PELL 
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 183

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             K      D+WA GCI  +L+   P  +  ++     KI           +P+      
Sbjct: 184 E-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----EYDFPE------ 231

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA------LEHRYFSS 296
                                 A DL+ K+   D   R+  ++         H +F S
Sbjct: 232 -----------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (518), Expect = 4e-63
 Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 41/328 (12%)

Query: 8   KKVADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK-LL 65
             + D Y +  +VLG G  G V +  + +T +  A+K ++   +       A RE++   
Sbjct: 7   NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHW 59

Query: 66  KELKSPHIIELIDAF----PHKGNLHLVFEFME-TDLETVIR-NTNIFLSPADIKSYMQM 119
           +  + PHI+ ++D +      +  L +V E ++  +L + I+   +   +  +    M+ 
Sbjct: 60  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 119

Query: 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGSPDRRFTHQVFARW 176
             + + + H   + HRD+KP NLL  S      LKL DFG A+   S +   T   +  +
Sbjct: 120 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC-YTPY 178

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
           Y APE+L   ++Y    D+W+ G I   LL   P    +  +     +            
Sbjct: 179 YVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--- 234

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS- 295
                                  +   S++   L+  +   +P  R+T  + + H +   
Sbjct: 235 -----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 277

Query: 296 SAPLPTEPNKLPRPATKRASKASDFNPQ 323
           S  +P  P    R   +   +  D   +
Sbjct: 278 STKVPQTPLHTSRVLKEDKERWEDVKEE 305

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (508), Expect = 2e-62
 Identities = 69/305 (22%), Positives = 111/305 (36%), Gaps = 46/305 (15%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT----ALREIKLLK 66
             +Y    +LG G +G VY  I       VAIK +   +  +            E+ LLK
Sbjct: 3   ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62

Query: 67  ELKSPH--IIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLK 122
           ++ S    +I L+D F    +  L+ E  E   DL   I      L     +S+    L+
Sbjct: 63  KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLE 121

Query: 123 GLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181
            +  CH   VLHRD+K  N+LI  + G+LKL DFG   +    D  +T     R Y  PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPE 179

Query: 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
            +   + +G    VW+ G +  +++      +   +I +    F         +      
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF-------RQRV----- 227

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301
                                 S +   L+       P  R T ++   H +     LP 
Sbjct: 228 ----------------------SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQ 265

Query: 302 EPNKL 306
           E  ++
Sbjct: 266 ETAEI 270

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  202 bits (514), Expect = 3e-62
 Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 38/295 (12%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG----KQKEGVNFTALREIKLLKE 67
           + +    ++G G +G VY      TG+  A+K +       KQ E +       + L+  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
              P I+ +  AF     L  + + M   DL   +    +F S AD++ Y    + GL  
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEH 122

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA 186
            H ++V++RD+KP N+L+  HG ++++D GLA  F       +       Y APE+L   
Sbjct: 123 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG--THGYMAPEVLQKG 180

Query: 187 KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
             Y +  D ++ GC+  +LL      +     D+  +I     T                
Sbjct: 181 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSF------- 232

Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSS 296
                            S +   LL  +   D   R+      AQ+  E  +F S
Sbjct: 233 -----------------SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (502), Expect = 2e-61
 Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 39/291 (13%)

Query: 13  RYLK-REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           R+LK    +G G++  VYK +DT+T   VA  +++  K  +        E ++LK L+ P
Sbjct: 9   RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHP 68

Query: 72  HIIELIDAF----PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +I+   D++      K  + LV E M +            +    ++S+ +  LKGL F 
Sbjct: 69  NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 128

Query: 128 HKK--WVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLF 184
           H +   ++HRD+K +N+ I G  G +K+ D GLA +           +    + APE+  
Sbjct: 129 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK--RASFAKAVIGTPEFMAPEMYE 186

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
              +Y   VDV+A G    E+           +  Q+                       
Sbjct: 187 E--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI----------------------- 221

Query: 245 YVEYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294
              Y+ V +    + F   A  +  +++      +   R + +  L H +F
Sbjct: 222 ---YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (506), Expect = 2e-61
 Identities = 81/346 (23%), Positives = 140/346 (40%), Gaps = 40/346 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELK 69
           + ++  ++LG+G++G V+ A   KT Q  AIK ++       + V  T + +  L    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 70  SPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
            P +  +   F  K NL  V E++   DL   I++ + F   +    Y    + GL F H
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEIILGLQFLH 120

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
            K +++RD+K +N+L+   G +K+ADFG+ +     D +         Y APE+L G ++
Sbjct: 121 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG-QK 179

Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
           Y   VD W+ G +  E+L  +    G  + +    I             D  + P ++  
Sbjct: 180 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-----------RMDNPFYPRWL-- 226

Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-QQALEHRYFSSAPLPTEPNKLP 307
                            +A DLL K+F  +P+ R+       +H  F          K  
Sbjct: 227 ---------------EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEI 271

Query: 308 ----RPATKRASKASDFNPQ--EGPTVLSPPRKTRRVMPDREGFEG 347
               RP  K     S+F+ +       LS   +      D+  F  
Sbjct: 272 DPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFRN 317

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (496), Expect = 1e-60
 Identities = 53/285 (18%), Positives = 109/285 (38%), Gaps = 31/285 (10%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
            +    + +G G++G VYK    K    VA+K + +             E+ +L++ +  
Sbjct: 8   GQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64

Query: 72  HIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           +I+  +  +     L +V ++ E + L   +           +    + T +G+ + H K
Sbjct: 65  NILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIF--GSPDRRFTHQVFARWYRAPELLFGAKQ 188
            ++HRD+K NN+ +     +K+ DFGLA +    S   +F     +  + APE++    +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183

Query: 189 --YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
             Y    DV+A G +  EL+  +      ++ DQ+  +                      
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-------------------- 223

Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
             +   +P L  +  +       L+++        R    Q L  
Sbjct: 224 --RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  186 bits (472), Expect = 6e-57
 Identities = 63/292 (21%), Positives = 110/292 (37%), Gaps = 33/292 (11%)

Query: 8   KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLK 66
             ++DRY   E+LG G    V+ A D +  + VA+K +R    +         RE +   
Sbjct: 3   SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 62

Query: 67  ELKSPHIIELIDAF----PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK 122
            L  P I+ + D      P     ++V E+++      I +T   ++P      +    +
Sbjct: 63  ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 122

Query: 123 GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ---VFARWYRA 179
            L F H+  ++HRD+KP N++I +   +K+ DFG+AR         T     +    Y +
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182

Query: 180 PELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239
           PE   G     A  DV++ GC+  E+L   P   G S +    +          ++   L
Sbjct: 183 PEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 241

Query: 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                                   S D   ++ K    +P+ R      +  
Sbjct: 242 ------------------------SADLDAVVLKALAKNPENRYQTAAEMRA 269

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (469), Expect = 1e-56
 Identities = 57/283 (20%), Positives = 109/283 (38%), Gaps = 35/283 (12%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
                 + +G G +G+V+          VAIK IR G   E  +F  + E +++ +L  P
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSE-EDF--IEEAEVMMKLSHP 60

Query: 72  HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
            +++L      +  + LVFEFME   L   +R      +   +        +G+A+  + 
Sbjct: 61  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ-VFARWYRAPELLFGAKQY 189
            V+HRD+   N L+G +  +K++DFG+ R         +    F   + +PE+     +Y
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF-SRY 179

Query: 190 GAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
            +  DVW+ G +  E+ +  +   +  S+ + +  I   F    P               
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA------------ 227

Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                          S     +++  +   P+ R    + L  
Sbjct: 228 ---------------STHVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  185 bits (471), Expect = 2e-56
 Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 38/291 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKS 70
             +     LG G++G V+       G+  A+K ++     +         E  +L  +  
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           P II +   F     + ++ +++E      +   +        K Y       L + H K
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 123

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            +++RD+KP N+L+  +G +K+ DFG A+                 Y APE++   K Y 
Sbjct: 124 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYTLCGTPDYIAPEVVST-KPYN 179

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             +D W+ G +  E+L        S+ +    KI  A       ++P             
Sbjct: 180 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA-----ELRFP------------- 221

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
                     P  ++D  DLLS++ T D   R+       +    H +F  
Sbjct: 222 ----------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 3e-55
 Identities = 70/337 (20%), Positives = 123/337 (36%), Gaps = 41/337 (12%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKS 70
           + +   ++LG+GT+G V    +  TG+  A+K +R      +      + E ++L+  + 
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           P +  L  AF     L  V E+          +     +    + Y    +  L + H +
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            V++RD+K  NL++   G +K+ DFGL +   S             Y APE+L     YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-NDYG 183

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VD W  G +  E++  R              I          ++P             
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI-----LMEEIRFP------------- 225

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPTEPNK 305
                      + S +A  LL+ +   DPK R+      A++ +EHR+F S        K
Sbjct: 226 ----------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQK 275

Query: 306 LP----RPATKRASKASDFNPQ--EGPTVLSPPRKTR 336
                 +P          F+ +       ++PP +  
Sbjct: 276 KLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYD 312

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  180 bits (457), Expect = 1e-54
 Identities = 54/321 (16%), Positives = 104/321 (32%), Gaps = 42/321 (13%)

Query: 9   KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +V +RY     +G G++G +Y   D   G+ VAIK   +  +   +      E K+ K +
Sbjct: 4   RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL----HIESKIYKMM 59

Query: 69  KSPHIIELIDAFPHKGNLH-LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
           +    I  I     +G+ + +V E +   LE +    +   S   +       +  + + 
Sbjct: 60  QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 119

Query: 128 HKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPD-------RRFTHQVFARWY 177
           H K  +HRD+KP+N L+G       + + DFGLA+ +           R   +      Y
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179

Query: 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237
            +     G  +     D+ + G +           QG     +  K              
Sbjct: 180 ASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER----------- 227

Query: 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ---QALEHRYF 294
                      +   + P+  L      +    L+   +     +       Q   + + 
Sbjct: 228 ---------ISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278

Query: 295 SSAPLPTEP---NKLPRPATK 312
                       N L   A++
Sbjct: 279 RQGFSYDYVFDWNMLKFGASR 299

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (453), Expect = 3e-54
 Identities = 51/284 (17%), Positives = 99/284 (34%), Gaps = 41/284 (14%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
                 + +G+G +G V        G  VA+K I+     +      L E  ++ +L+  
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAF----LAEASVMTQLRHS 60

Query: 72  HIIELIDAF-PHKGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCH 128
           ++++L+      KG L++V E+M    L   +R+     L    +  +     + + +  
Sbjct: 61  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120

Query: 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188
               +HRD+   N+L+      K++DFGL +   S             + APE L   K+
Sbjct: 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKLPVKWTAPEALRE-KK 176

Query: 189 YGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           +    DVW+ G +  E+    R         D + ++   +    P   P          
Sbjct: 177 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP---------- 226

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                                +++   +  D   R +  Q  E 
Sbjct: 227 -----------------PAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (450), Expect = 8e-54
 Identities = 55/291 (18%), Positives = 111/291 (38%), Gaps = 39/291 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           +     E LG G +G V+          VA+K ++ G          L E  L+K+L+  
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQ 68

Query: 72  HIIELIDAFPHKGNLHLVFEFMETDL--ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
            ++ L      +  ++++ E+ME     + +   + I L+   +        +G+AF  +
Sbjct: 69  RLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQ 188
           +  +HRD++  N+L+      K+ADFGLAR+   +         F   + APE +     
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY-GT 186

Query: 189 YGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           +    DVW+ G +  E++ + R    G ++ + +  +   +    P   P          
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---------- 236

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE--HRYFSS 296
                            ++   L+   +   P+ R T          +F++
Sbjct: 237 -----------------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (446), Expect = 2e-53
 Identities = 49/277 (17%), Positives = 97/277 (35%), Gaps = 35/277 (12%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELI 77
           + LG G +GVV      +    VAIK I+ G   E      + E K++  L    +++L 
Sbjct: 10  KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 65

Query: 78  DAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136
                +  + ++ E+M    L   +R          +    +   + + +   K  LHRD
Sbjct: 66  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 125

Query: 137 MKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQVFARWYRAPELLFGAKQYGAGVDV 195
           +   N L+   G +K++DFGL+R     +        F   +  PE+L    ++ +  D+
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY-SKFSSKSDI 184

Query: 196 WAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254
           WA G +  E+ +  +   +  ++ +    I        P                     
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS----------------- 227

Query: 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                     +    ++   +      R T +  L +
Sbjct: 228 ----------EKVYTIMYSCWHEKADERPTFKILLSN 254

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (447), Expect = 3e-53
 Identities = 62/300 (20%), Positives = 120/300 (40%), Gaps = 39/300 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
           +       LG+G +G V+      T + VAIK ++ G          L+E +++K+L+  
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHE 72

Query: 72  HIIELIDAFPHKGNLHLVFEFMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
            +++L      +  +++V E+M     L+ +   T  +L    +         G+A+  +
Sbjct: 73  KLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 131

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARWYRAPELLFGAKQ 188
              +HRD++  N+L+G +   K+ADFGLAR+    +        F   + APE      +
Sbjct: 132 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GR 190

Query: 189 YGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
           +    DVW+ G +  EL    R    G  + + L ++   +    P + P          
Sbjct: 191 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP---------- 240

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE--HRYFSSAPLPTEPNK 305
                            +   DL+ + +  +P+ R T +        YF+S     +P +
Sbjct: 241 -----------------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 283

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  176 bits (447), Expect = 4e-53
 Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 38/294 (12%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           V   Y     +GEG++GV+++  +    Q VAIK          +      E +  K L 
Sbjct: 3   VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQL----RDEYRTYKLLA 58

Query: 70  S-PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128
               I  +        +  LV + +   LE ++       S   +    +  L  +   H
Sbjct: 59  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 118

Query: 129 KKWVLHRDMKPNNLLIGS-----HGQLKLADFGLARIFGSPD-------RRFTHQVFARW 176
           +K +++RD+KP+N LIG         + + DFG+ + +  P        R   +      
Sbjct: 119 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 178

Query: 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236
           Y +     G ++     D+ A G +F   L      QG        K             
Sbjct: 179 YMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI--------- 228

Query: 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                       +   + PLR L     ++    +         A         
Sbjct: 229 -----------GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 5e-53
 Identities = 63/311 (20%), Positives = 119/311 (38%), Gaps = 37/311 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGK--QKEGVNFTALREIKLLK 66
           + +   +VLG G YG V+         TG+  A+K ++     QK         E ++L+
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 67  ELK-SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLA 125
            ++ SP ++ L  AF  +  LHL+ +++         +     +  +++ Y+   +  L 
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT--HQVFARWYRAPELL 183
             HK  +++RD+K  N+L+ S+G + L DFGL++ F + +            +     + 
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR 203

Query: 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
            G   +   VD W+ G +  ELL          + +   +I      + P    ++    
Sbjct: 204 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM---- 259

Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAP 298
                               S  A DL+ ++   DPK R+      A +  EH +F    
Sbjct: 260 --------------------SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 299

Query: 299 LPTEPNKLPRP 309
                 K    
Sbjct: 300 WDDLAAKKVPA 310

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  174 bits (442), Expect = 2e-52
 Identities = 60/299 (20%), Positives = 114/299 (38%), Gaps = 35/299 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP 71
                +  LG G YG VY+ +  K   TVA+K ++    +       L+E  ++KE+K P
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHP 73

Query: 72  HIIELIDAFPHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK 129
           ++++L+     +   +++ EFM     L+ +       +S   +          + +  K
Sbjct: 74  NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 133

Query: 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF-GSPDRRFTHQVFARWYRAPELLFGAKQ 188
           K  +HRD+   N L+G +  +K+ADFGL+R+  G          F   + APE L    +
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NK 192

Query: 189 YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248
           +    DVWA G +  E+           D+ Q+                          Y
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--------------------------Y 226

Query: 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE--HRYFSSAPLPTEPNK 305
           + +             +   +L+   + ++P  R +  +  +     F  + +  E  K
Sbjct: 227 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 285

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  175 bits (445), Expect = 5e-52
 Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 51/338 (15%)

Query: 13  RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK--- 69
           RY+    LG G +  V+ A D      VA+K +R  K        A  EIKLL+ +    
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE---AAEDEIKLLQRVNDAD 70

Query: 70  --------SPHIIELIDAF----PHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSY 116
                   + HI++L+D F    P+  ++ +VFE +  + L  + +  +  +    +K  
Sbjct: 71  NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 130

Query: 117 MQMTLKGLAFCHKKW-VLHRDMKPNNLLIGSHG------QLKLADFGLARIFGSPDRRFT 169
            +  L GL + H++  ++H D+KP N+L+          Q+K+AD G A  +        
Sbjct: 131 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 190

Query: 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS------DIDQLGK 223
                R YR+PE+L G   +G G D+W+  C+  EL+      +         D D + +
Sbjct: 191 QT---REYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 246

Query: 224 IFAAFGTATPSQWPDLAYLPDYVE-------YQYVAAPPLRSLFPS-------ASDDALD 269
           I    G        +  Y   +            +   PL  +           + +  D
Sbjct: 247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 306

Query: 270 LLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLP 307
            LS M   DP+ R  A   + H +     L  E  ++P
Sbjct: 307 FLSPMLQLDPRKRADAGGLVNHPWLKD-TLGMEEIRVP 343

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (436), Expect = 1e-51
 Identities = 57/291 (19%), Positives = 116/291 (39%), Gaps = 40/291 (13%)

Query: 15  LKREVLGEGTYGVVYKAI--DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH 72
           L+ + LG G +G V K      K  +TVA+K ++       +    L E  ++++L +P+
Sbjct: 10  LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 69

Query: 73  IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
           I+ +I     + +  LV E  E          N  +   +I   +     G+ +  +   
Sbjct: 70  IVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 128

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW---YRAPELLFGAKQY 189
           +HRD+   N+L+ +    K++DFGL++   + +  +  Q   +W   + APE +    ++
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY-YKF 187

Query: 190 GAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
            +  DVW+ G +  E  +  ++P+ +G    +    +        P+  P          
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPY-RGMKGSEVTAMLEKGERMGCPAGCP---------- 236

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ---ALEHRYFS 295
                             +  DL++  +TYD + R         L + Y+ 
Sbjct: 237 -----------------REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 270

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (437), Expect = 1e-51
 Identities = 65/303 (21%), Positives = 113/303 (37%), Gaps = 35/303 (11%)

Query: 10  VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           +A   + +E +G+G +G V++      G+ VA+K     +++    +    EI     L+
Sbjct: 1   IARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERS---WFREAEIYQTVMLR 55

Query: 70  SPHIIELIDAFPHKGN----LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGL 124
             +I+  I A          L LV ++ E   L   +      ++   +      T  GL
Sbjct: 56  HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGL 113

Query: 125 AFCH--------KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP----DRRFTHQV 172
           A  H        K  + HRD+K  N+L+  +G   +AD GLA    S     D    H+V
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173

Query: 173 FARWYRAPELLFGA-----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227
             + Y APE+L  +      +     D++A G +F E+  R        D          
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL------P 227

Query: 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287
           +    PS            E +     P R     A      ++ + +  +  AR+TA +
Sbjct: 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 287

Query: 288 ALE 290
             +
Sbjct: 288 IKK 290

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 2e-51
 Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 43/298 (14%)

Query: 12  DRYLKREV-LGEGTYGVVYKAID--TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           D  L  ++ LG G +G V + +    K    VAIK ++ G +K       +RE +++ +L
Sbjct: 8   DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQL 66

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
            +P+I+ LI        L LV E      L   +      +  +++   +     G+ + 
Sbjct: 67  DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 125

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR---WYRAPELLF 184
            +K  +HRD+   N+L+ +    K++DFGL++  G+ D  +T +   +    + APE + 
Sbjct: 126 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 185

Query: 185 GAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242
             +++ +  DVW+ G    E L+  ++P+ +     + +  I        P + P     
Sbjct: 186 F-RKFSSRSDVWSYGVTMWEALSYGQKPY-KKMKGPEVMAFIEQGKRMECPPECP----- 238

Query: 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ---QALEHRYFSSA 297
                                  +   L+S  + Y  + R       Q +   Y+S A
Sbjct: 239 ----------------------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 274

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (429), Expect = 1e-50
 Identities = 58/285 (20%), Positives = 103/285 (36%), Gaps = 34/285 (11%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQT---VAIKKIRLGKQKEGVNFTALREIKLLKEL 68
           +R      +GEG +G V++ I          VAIK  +     + V    L+E   +++ 
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQF 65

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             PHI++LI     +  + ++ E     +L + ++     L  A +  Y       LA+ 
Sbjct: 66  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAK 187
             K  +HRD+   N+L+ S+  +KL DFGL+R           +               +
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184

Query: 188 QYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246
           ++ +  DVW  G    E+L       QG  + D +G+I                      
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG------------------- 225

Query: 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                       + P+       L++K + YDP  R    +    
Sbjct: 226 --------ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  171 bits (434), Expect = 1e-50
 Identities = 62/291 (21%), Positives = 105/291 (36%), Gaps = 38/291 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKS 70
           D++ + + LG G++G V      ++G   A+K +   K  K       L E ++L+ +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 71  PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130
           P +++L  +F    NL++V E++               S    + Y    +    + H  
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160

Query: 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG 190
            +++RD+KP NLLI   G +++ DFG A+                   APE++   K Y 
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP---EALAPEIILS-KGYN 216

Query: 191 AGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250
             VD WA G +  E+    P       I    KI                  P +     
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-----------VSGKVRFPSHF---- 261

Query: 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSS 296
                        S D  DLL  +   D   R             H++F++
Sbjct: 262 -------------SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (424), Expect = 2e-49
 Identities = 61/313 (19%), Positives = 109/313 (34%), Gaps = 62/313 (19%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQT-----VAIKKIRLGKQKEGVNFTALREIKLLK 66
           +     +VLG G +G V  A      +T     VA+K ++            + E+K++ 
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSERE-ALMSELKMMT 95

Query: 67  ELKS-PHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTN------------------- 105
           +L S  +I+ L+ A    G ++L+FE+    DL   +R+                     
Sbjct: 96  QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155

Query: 106 ---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162
                L+  D+  +     KG+ F   K  +HRD+   N+L+     +K+ DFGLAR   
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 215

Query: 163 SPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDID 219
           S        +      + APE LF    Y    DVW+ G +  E+ +       G     
Sbjct: 216 SDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274

Query: 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYD 278
              K+                                +   P  A+++   ++   + +D
Sbjct: 275 NFYKLI---------------------------QNGFKMDQPFYATEEIYIIMQSCWAFD 307

Query: 279 PKARITAQQALEH 291
            + R +       
Sbjct: 308 SRKRPSFPNLTSF 320

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  164 bits (416), Expect = 2e-48
 Identities = 52/290 (17%), Positives = 105/290 (36%), Gaps = 39/290 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQT---VAIKKIRLGKQKEGVNFTALREIKLLKEL 68
                 +V+G G +G V        G+    VAIK ++ G  ++      L E  ++ + 
Sbjct: 26  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR-DFLSEASIMGQF 84

Query: 69  KSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127
             P++I L         + ++ EFME   L++ +R  +   +   +   ++    G+ + 
Sbjct: 85  DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 144

Query: 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW-----YRAPEL 182
                +HRD+   N+L+ S+   K++DFGL+R         T+           + APE 
Sbjct: 145 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 204

Query: 183 LFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +   +++ +  DVW+ G +  E+++         ++ D +  I   +    P   P    
Sbjct: 205 IQY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP---- 259

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                                       L+   +  D   R    Q +  
Sbjct: 260 -----------------------SALHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 2e-48
 Identities = 48/288 (16%), Positives = 92/288 (31%), Gaps = 35/288 (12%)

Query: 12  DRYLKREVLGEGTYGVVYKAI---DTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKE 67
                 E LG+G++GVV +      +    +VA+K ++     +       +RE+  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 68  LKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
           L   ++I L         + +V E      L   +R          +  Y     +G+ +
Sbjct: 68  LDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR--WYRAPELLF 184
              K  +HRD+   NLL+ +   +K+ DFGL R     D  +  Q   +  +        
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186

Query: 185 GAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243
             + +    D W  G    E+    +    G +    L KI                   
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI------------------- 227

Query: 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                                 D  +++ + + + P+ R T     + 
Sbjct: 228 -------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 268

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (411), Expect = 1e-47
 Identities = 67/307 (21%), Positives = 111/307 (36%), Gaps = 57/307 (18%)

Query: 12  DRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +R    + LG G +G V +A     I +    TVA+K ++            + E+K+L 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL-MSELKVLS 81

Query: 67  ELKS-PHIIELIDAFPHKGNLHLVFEFME-TDLETVIR-----------------NTNIF 107
            L +  +I+ L+ A    G   ++ E+    DL   +R                 +  + 
Sbjct: 82  YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141

Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167
           L   D+ S+     KG+AF   K  +HRD+   N+L+      K+ DFGLAR   +    
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

Query: 168 F--THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKI 224
               +      + APE +F    Y    DVW+ G    EL +       G     +  K+
Sbjct: 202 VVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260

Query: 225 FAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARI 283
                                           R L P  A  +  D++   +  DP  R 
Sbjct: 261 I---------------------------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRP 293

Query: 284 TAQQALE 290
           T +Q ++
Sbjct: 294 TFKQIVQ 300

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (409), Expect = 3e-47
 Identities = 50/287 (17%), Positives = 104/287 (36%), Gaps = 34/287 (11%)

Query: 11  ADRYLKREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLK 66
              + K +VLG G +G VYK +    G+     VAIK++R     +      L E  ++ 
Sbjct: 8   ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMA 66

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAF 126
            + +PH+  L+          +        L   +R     +    + ++     KG+ +
Sbjct: 67  SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126

Query: 127 CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA--RWYRAPELLF 184
              + ++HRD+   N+L+ +   +K+ DFGLA++ G+ ++ +  +       + A E + 
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186

Query: 185 GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244
             + Y    DVW+ G    EL+             ++                       
Sbjct: 187 H-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----------------------- 222

Query: 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                 +         P  + D   ++ K +  D  +R   ++ +  
Sbjct: 223 ---SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (407), Expect = 4e-47
 Identities = 65/300 (21%), Positives = 119/300 (39%), Gaps = 50/300 (16%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTG--QTVAIKKIRLGKQKEGVNFTALREIKLLKELK 69
           +    ++V+GEG +G V KA   K G     AIK+++    K+        E+++L +L 
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF-AGELEVLCKLG 68

Query: 70  S-PHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF---------------LSPAD 112
             P+II L+ A  H+G L+L  E+    +L   +R + +                LS   
Sbjct: 69  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128

Query: 113 IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172
           +  +     +G+ +  +K  +HRD+   N+L+G +   K+ADFGL+R      ++   ++
Sbjct: 129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 188

Query: 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTA 231
             RW     L +    Y    DVW+ G +  E+++       G +  +   K+   +   
Sbjct: 189 PVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE 246

Query: 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
            P                               D+  DL+ + +   P  R +  Q L  
Sbjct: 247 KPLNC---------------------------DDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  160 bits (406), Expect = 4e-47
 Identities = 59/311 (18%), Positives = 115/311 (36%), Gaps = 61/311 (19%)

Query: 12  DRYLKREVLGEGTYGVVYKA-----IDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           +       +GEG +G V++A     +  +    VA+K ++     +       RE  L+ 
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA-DFQREAALMA 71

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF------------------ 107
           E  +P+I++L+        + L+FE+M   DL   +R+ +                    
Sbjct: 72  EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 131

Query: 108 -----LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162
                LS A+     +    G+A+  ++  +HRD+   N L+G +  +K+ADFGL+R   
Sbjct: 132 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 191

Query: 163 SPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDID 219
           S D  +   +      +  PE +F   +Y    DVWA G +  E+ +       G +  +
Sbjct: 192 SADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 250

Query: 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDP 279
            +                            YV    + +   +   +  +L+   ++  P
Sbjct: 251 VI---------------------------YYVRDGNILACPENCPLELYNLMRLCWSKLP 283

Query: 280 KARITAQQALE 290
             R +      
Sbjct: 284 ADRPSFCSIHR 294

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (407), Expect = 5e-47
 Identities = 58/284 (20%), Positives = 100/284 (35%), Gaps = 39/284 (13%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQT---VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74
           EV+G G +G VY              A+K +        V+   L E  ++K+   P+++
Sbjct: 33  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVL 91

Query: 75  ELIDA-FPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132
            L+      +G+  +V  +M+  DL   IRN     +  D+  +     KG+ F   K  
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 151

Query: 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----RRFTHQVFARWYRAPELLFGAKQ 188
           +HRD+   N ++     +K+ADFGLAR     +       T       + A E L   K 
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 211

Query: 189 YGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247
                DVW+ G +  EL+    P     +  D    +        P   P          
Sbjct: 212 TTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP---------- 260

Query: 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                            D   +++ K +    + R +  + +  
Sbjct: 261 -----------------DPLYEVMLKCWHPKAEMRPSFSELVSR 287

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (399), Expect = 3e-46
 Identities = 56/289 (19%), Positives = 108/289 (37%), Gaps = 40/289 (13%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLG-KQKEGVNFTALREIKLLK 66
               +++V+G G +G VYK +   +       VAIK ++ G  +K+ V+F  L E  ++ 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF--LGEAGIMG 64

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFMETDL-ETVIRNTNIFLSPADIKSYMQMTLKGLA 125
           +    +II L         + ++ E+ME    +  +R  +   S   +   ++    G+ 
Sbjct: 65  QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 124

Query: 126 FCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FTHQVFARWYRAPEL 182
           +      +HRD+   N+L+ S+   K++DFGL+R+           +       + APE 
Sbjct: 125 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 184

Query: 183 LFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241
           +   K   A  DVW+ G +  E++          S+ + +  I   F   TP   P    
Sbjct: 185 ISYRKFTSA-SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP---- 239

Query: 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290
                                       L+ + +  +   R      + 
Sbjct: 240 -----------------------SAIYQLMMQCWQQERARRPKFADIVS 265

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (383), Expect = 1e-43
 Identities = 54/298 (18%), Positives = 105/298 (35%), Gaps = 47/298 (15%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           ++      LG+G++G+VY+ +       +    VAIK +             L E  ++K
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMK 78

Query: 67  ELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIF---------LSPADIKSY 116
           E    H++ L+          ++ E M   DL++ +R+              S + +   
Sbjct: 79  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 138

Query: 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFA 174
                 G+A+ +    +HRD+   N ++     +K+ DFG+ R     D  R+    +  
Sbjct: 139 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 198

Query: 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATP 233
             + +PE L     +    DVW+ G +  E+        QG S+   L  +         
Sbjct: 199 VRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM-------- 249

Query: 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291
                                 L     +  D   +L+   + Y+PK R +  + +  
Sbjct: 250 -------------------EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 2e-43
 Identities = 62/306 (20%), Positives = 120/306 (39%), Gaps = 54/306 (17%)

Query: 12  DRYLKREVLGEGTYGVVYKAIDTKT-------GQTVAIKKIRLGKQKEGVNFTALREIKL 64
           DR +  + LGEG +G V  A               VA+K ++    ++ ++   + E+++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEM 71

Query: 65  LKEL-KSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR---------------NTNIF 107
           +K + K  +II L+ A    G L+++ E+    +L   ++               N    
Sbjct: 72  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

Query: 108 LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165
           LS  D+ S      +G+ +   K  +HRD+   N+L+     +K+ADFGLAR     D  
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191

Query: 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIF 225
           ++ T+      + APE LF  + Y    DVW+ G +  E+            +++L    
Sbjct: 192 KKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL---- 246

Query: 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA 285
                                 ++ +          + +++   ++   +   P  R T 
Sbjct: 247 ----------------------FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 284

Query: 286 QQALEH 291
           +Q +E 
Sbjct: 285 KQLVED 290

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (375), Expect = 1e-42
 Identities = 63/305 (20%), Positives = 109/305 (35%), Gaps = 52/305 (17%)

Query: 12  DRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK 66
           DR    + LG G +G V +A       T T +TVA+K ++ G               L+ 
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 67  ELKSPHIIELIDAFPHKGN-LHLVFEFME-TDLETVIRN---------------TNIFLS 109
                +++ L+ A    G  L ++ EF +  +L T +R+                  FL+
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 110 PADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RR 167
              +  Y     KG+ F   +  +HRD+   N+L+     +K+ DFGLAR         R
Sbjct: 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 192

Query: 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFA 226
                    + APE +F  + Y    DVW+ G +  E+ +       G    ++  +   
Sbjct: 193 KGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL- 250

Query: 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ 286
                   +       PDY                  + +    +   +  +P  R T  
Sbjct: 251 --------KEGTRMRAPDYT-----------------TPEMYQTMLDCWHGEPSQRPTFS 285

Query: 287 QALEH 291
           + +EH
Sbjct: 286 ELVEH 290

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score =  106 bits (264), Expect = 1e-27
 Identities = 26/202 (12%), Positives = 68/202 (33%), Gaps = 41/202 (20%)

Query: 18  EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK----------------QKEGVNFTALRE 61
           +++GEG    V+     +      +K  ++G                        +A  E
Sbjct: 6   KLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 62  IKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121
            + L++L+   + ++     +     ++ E ++             +   +    + M L
Sbjct: 65  FRALQKLQGLAVPKVYAWEGN----AVLMELIDAK-------ELYRVRVENPDEVLDMIL 113

Query: 122 KGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF----THQVFARWY 177
           + +A  + + ++H D+   N+L+   G + + DF  +   G    R       +    ++
Sbjct: 114 EEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGWREILERDVRNIITYF 172

Query: 178 RAPELLFGAKQYGAGVDVWAAG 199
                    + Y    D+ +A 
Sbjct: 173 S--------RTYRTEKDINSAI 186

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	397
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.95
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.79
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.29
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.15
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.44
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.18
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.81

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-67  Score=488.28  Aligned_cols=294  Identities=60%  Similarity=1.056  Sum_probs=260.9

Q ss_pred             eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948           16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF   92 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~   92 (397)
                      .+++||+|+||+||+|+++.+|+.||||++......   ......+.+|+.+|++++|||||+++++|.+++++|+||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            568999999999999999999999999999765432   22345688999999999999999999999999999999999


Q ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948           93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV  172 (397)
Q Consensus        93 ~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~  172 (397)
                      |.|+++..+...+..+++..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+............+
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~  161 (299)
T d1ua2a_          82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV  161 (299)
T ss_dssp             CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSC
T ss_pred             hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccccccee
Confidence            99988888887777899999999999999999999999999999999999999999999999999988776666666778


Q ss_pred             cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccc
Q 015948          173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA  252 (397)
Q Consensus       173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (397)
                      ||++|+|||++.+...|+.++|||||||++|||++|.+||.+.++.+++.+|.+.++.+....|++..............
T Consensus       162 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (299)
T d1ua2a_         162 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP  241 (299)
T ss_dssp             CCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCC
T ss_pred             cChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCC
Confidence            99999999999876789999999999999999999999999999999999999999999999998887777666666666


Q ss_pred             CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCc
Q 015948          253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRP  309 (397)
Q Consensus       253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~  309 (397)
                      ..++...++.+|+++++||.+||+.||++|||++|+|+||||++.+.|......|+|
T Consensus       242 ~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p~~~~~~p~p  298 (299)
T d1ua2a_         242 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRP  298 (299)
T ss_dssp             CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCCCSSSSCCC
T ss_pred             CCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCCCCCCCCCCC
Confidence            666777888999999999999999999999999999999999988877766666554

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-65  Score=462.53  Aligned_cols=260  Identities=25%  Similarity=0.382  Sum_probs=217.9

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++....... ....+.+|+.+|++++|||||+++++|.+++.+|+|
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~iv   81 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   81 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEE
Confidence            4678999999999999999999999999999999997654322 334688999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--C
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--R  166 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--~  166 (397)
                      ||||+ |+|.+.+.+ +..+++..++.++.||+.||+|||++||+||||||+||||+.+|++||+|||+|+......  .
T Consensus        82 mEy~~gg~L~~~l~~-~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~  160 (271)
T d1nvra_          82 LEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  160 (271)
T ss_dssp             EECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EeccCCCcHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence            99998 588877754 4469999999999999999999999999999999999999999999999999999764332  3


Q ss_pred             cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+||+.|||||++.+...++.++|||||||++|||++|++||.+.++............                 
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~-----------------  223 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-----------------  223 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTC-----------------
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-----------------
Confidence            345678999999999998755567889999999999999999999987665443333322110                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                              .....++.+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       224 --------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         224 --------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             --------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             --------CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence                    001112356899999999999999999999999999999974

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-64  Score=463.41  Aligned_cols=256  Identities=28%  Similarity=0.485  Sum_probs=225.4

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.....  .....+.+|+.+|+.++|||||+++++|.+++++|+||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC--hHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            4689999999999999999999999999999999976533  23456889999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |||+ |+|..++.+.  .+++..++.|++||+.||.|||++||+||||||+||||+.+|++||+|||+|+.+........
T Consensus        97 Ey~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~  174 (293)
T d1yhwa1          97 EYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  174 (293)
T ss_dssp             ECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             EecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccccccc
Confidence            9998 5777766553  499999999999999999999999999999999999999999999999999998866666667


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ  249 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  249 (397)
                      ..+||+.|+|||++.+ ..|+.++|||||||++|+|++|++||.+.+..+.+..+.......                  
T Consensus       175 ~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~------------------  235 (293)
T d1yhwa1         175 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE------------------  235 (293)
T ss_dssp             CCCSCGGGCCHHHHSS-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC------------------
T ss_pred             ccccCCCccChhhhcC-CCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCC------------------
Confidence            7889999999999977 668999999999999999999999999988888777766542100                  


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                             ....+.+|+++++||.+||+.||.+|||++|+|+||||+.
T Consensus       236 -------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         236 -------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             -------CSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             -------CCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence                   0112346899999999999999999999999999999974

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-64  Score=462.93  Aligned_cols=289  Identities=48%  Similarity=0.864  Sum_probs=250.3

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      |+|++.+.||+|+||+||+|++..+|+.||||++......+.....+.+|+++|++++|||||+++++|.+++++|+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            68999999999999999999999999999999997765555556678899999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948           92 FMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH  170 (397)
Q Consensus        92 ~~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~  170 (397)
                      ||.|++...+... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...........
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~  161 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH  161 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTC
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCccccee
Confidence            9998877776544 556999999999999999999999999999999999999999999999999999988776667777


Q ss_pred             cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-cc
Q 015948          171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQ  249 (397)
Q Consensus       171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~  249 (397)
                      .+||+.|+|||++.....++.++|||||||++|+|++|+.||.+.+..+.+..+....+.+....|+.....+.... +.
T Consensus       162 ~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (298)
T d1gz8a_         162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP  241 (298)
T ss_dssp             CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred             ecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccc
Confidence            88999999999988767789999999999999999999999999999999999999999888777776554443322 12


Q ss_pred             cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      ...........+.+|.++++||.+||+.||++|||++|+|+||||++...|
T Consensus       242 ~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             cccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            223344556677889999999999999999999999999999999876544

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-64  Score=461.42  Aligned_cols=259  Identities=27%  Similarity=0.388  Sum_probs=225.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .+.|++.+.||+|+||+||+|+++.+|+.||||++....  ......+.+|+++|++++|||||+++++|.+++.+|+||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvm   88 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI   88 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEE
Confidence            467999999999999999999999999999999997643  233456789999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      |||+ |+|..++.+....+++..++.++.||+.||.|||++||+||||||+||||+.+|++||+|||+|+..........
T Consensus        89 Ey~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~  168 (288)
T d2jfla1          89 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD  168 (288)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHT
T ss_pred             ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCccccc
Confidence            9998 578888777667799999999999999999999999999999999999999999999999999987654444455


Q ss_pred             ccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          170 HQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ..+||+.|+|||++..    ...|+.++|||||||++|||++|++||.+.+..+.+.++......               
T Consensus       169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~---------------  233 (288)
T d2jfla1         169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP---------------  233 (288)
T ss_dssp             CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCC---------------
T ss_pred             ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence            6789999999999842    356899999999999999999999999998888877777653110               


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                .....+.+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       234 ----------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         234 ----------TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             ----------CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             ----------CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence                      01112345899999999999999999999999999999974

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-64  Score=455.81  Aligned_cols=254  Identities=27%  Similarity=0.461  Sum_probs=222.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||+|++.+... .......+.+|+.+|+.++|||||+++++|.+++.+|+|
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv   84 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   84 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence            4789999999999999999999999999999999976542 233445678999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||||+ |+|.+.+.+.. .+++..++.|+.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.....  ..
T Consensus        85 mEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~--~~  161 (263)
T d2j4za1          85 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RR  161 (263)
T ss_dssp             EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC--CC
T ss_pred             EeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC--cc
Confidence            99998 58888877644 5999999999999999999999999999999999999999999999999999876432  34


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+..+...-.                   
T Consensus       162 ~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~-------------------  221 (263)
T d2j4za1         162 TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-------------------  221 (263)
T ss_dssp             EETTEEGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-------------------
T ss_pred             cccCCCCcccCHHHHcC-CCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------
Confidence            56789999999999987 6689999999999999999999999999887777776644210                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                               .+...+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       222 ---------~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         222 ---------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             ---------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence                     112345899999999999999999999999999999964

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-64  Score=460.15  Aligned_cols=263  Identities=24%  Similarity=0.381  Sum_probs=224.8

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      -.++|++.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+++|++++|||||+++++|.+++.+|+
T Consensus         6 ~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i   85 (288)
T d1uu3a_           6 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF   85 (288)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEE
T ss_pred             CCCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEE
Confidence            35789999999999999999999999999999999976542 33344567899999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--  165 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--  165 (397)
                      |||||+ |+|.+++...+ .+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.+....  
T Consensus        86 vmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          86 GLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence            999998 58888777654 59999999999999999999999999999999999999999999999999999875432  


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+.++.+.-.                
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~----------------  227 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY----------------  227 (288)
T ss_dssp             -----CCCCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC----------------
T ss_pred             cccccccCCccccCceeecc-CCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCC----------------
Confidence            33445689999999999987 5689999999999999999999999999888887777754210                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHH------HhcCCCCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ------ALEHRYFSSAPLPTE  302 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e------~l~hp~~~~~~~~~~  302 (397)
                                  .+...+|+++++||.+||+.||.+|||++|      +++||||++..|...
T Consensus       228 ------------~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l  278 (288)
T d1uu3a_         228 ------------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL  278 (288)
T ss_dssp             ------------CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred             ------------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHh
Confidence                        112346899999999999999999999987      588999998776543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.1e-63  Score=468.05  Aligned_cols=268  Identities=28%  Similarity=0.459  Sum_probs=232.9

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ..+.++|++.+.||+|+||+||+|+++.+|+.||||++......  ....+.+|+.+|++++|||||+++++|.+++.+|
T Consensus        22 ~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~--~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   99 (350)
T d1koaa2          22 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV   99 (350)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHH--HHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEE
T ss_pred             CCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchh--hHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            34678999999999999999999999999999999999754322  2346779999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc--CCcEEEeeeccceeeCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGSP  164 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~--~~~~kl~DFG~a~~~~~~  164 (397)
                      +|||||+ |+|.+.+.+....+++..++.|+.||+.||+|||++||+||||||+||||+.  +|.+||+|||+|+.+...
T Consensus       100 ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~  179 (350)
T d1koaa2         100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  179 (350)
T ss_dssp             EEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred             EEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence            9999998 6898988777777999999999999999999999999999999999999964  578999999999987543


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                       ......+||+.|||||++.+ ..|+.++|||||||++|+|++|++||.+.+..+.+..+........            
T Consensus       180 -~~~~~~~gT~~Y~aPEv~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~------------  245 (350)
T d1koaa2         180 -QSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD------------  245 (350)
T ss_dssp             -SCEEEECSCTTTCCHHHHHT-CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC------------
T ss_pred             -cccceecCcccccCHHHHcC-CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC------------
Confidence             34556789999999999987 5689999999999999999999999999988888888766422111            


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP  303 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~  303 (397)
                                  ...++.+|+++++||.+||+.||++|||++|+|+||||+....+...
T Consensus       246 ------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~~~~~  292 (350)
T d1koaa2         246 ------------DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD  292 (350)
T ss_dssp             ------------CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTCCSCC
T ss_pred             ------------cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCCCCch
Confidence                        12334568999999999999999999999999999999987665443

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-63  Score=454.42  Aligned_cols=256  Identities=29%  Similarity=0.456  Sum_probs=210.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHL   88 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~l   88 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++......+.....+.+|+++|++++|||||+++++|.+  ++.+|+
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            478999999999999999999999999999999998766555445567899999999999999999999854  567999


Q ss_pred             EEEccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCC-----ccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           89 VFEFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKW-----VLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~-----ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                      |||||+ |+|.+++.+   .+..+++..++.++.||+.||+|||++|     |+||||||+||||+.+|.+||+|||+|+
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence            999998 688888754   3456999999999999999999999976     9999999999999999999999999999


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .+..........+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+....+...-.          
T Consensus       163 ~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~----------  231 (269)
T d2java1         163 ILNHDTSFAKAFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF----------  231 (269)
T ss_dssp             HC-----------CCCSCCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC----------
T ss_pred             ecccCCCccccCCCCcccCCHHHHcC-CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----------
Confidence            87665555667889999999999976 5699999999999999999999999999888777777655311          


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                       ..+...+|+++++||.+||+.||.+|||++|+|+|||.
T Consensus       232 -----------------~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         232 -----------------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             -----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             -----------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence                             11223468999999999999999999999999999995

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=9.4e-63  Score=453.94  Aligned_cols=284  Identities=47%  Similarity=0.863  Sum_probs=248.5

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||+||+|+++ +|+.||||++......+.....+.+|+.+|++++|||||+++++|.+++..|++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            68999999999999999999986 78999999998776666666788899999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      |+.|+++..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|.............
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~  160 (286)
T d1ob3a_          81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE  160 (286)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             eehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCcccccee
Confidence            99999988888888889999999999999999999999999999999999999999999999999998876666556667


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-ccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQY  250 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~  250 (397)
                      ++++.|+|||.+.+...++.++|||||||++|||++|++||.+.++.+++.++....+......|++......... ...
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T d1ob3a_         161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV  240 (286)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred             cccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccccc
Confidence            7899999999998877889999999999999999999999999999999999999999988888877655544322 222


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                      ....+.....+.+|++++|||.+||+.||++|||++|+|+||||+.
T Consensus       241 ~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            2334456667889999999999999999999999999999999963

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-63  Score=464.95  Aligned_cols=259  Identities=25%  Similarity=0.381  Sum_probs=228.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.+|+.++||||++++++|++++.+|+|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            5789999999999999999999999999999999986542 233345678999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||||+ |+|..++.+.+ .+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+.........
T Consensus        84 ~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~  162 (337)
T d1o6la_          84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM  162 (337)
T ss_dssp             EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred             eeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCccc
Confidence            99999 57777776644 59999999999999999999999999999999999999999999999999999876666666


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+....+...-.                   
T Consensus       163 ~~~~GT~~Y~aPE~~~~-~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~-------------------  222 (337)
T d1o6la_         163 KTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------------------  222 (337)
T ss_dssp             CCCEECGGGCCGGGGSS-SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-------------------
T ss_pred             ccceeCHHHhhhhhccC-CCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCC-------------------
Confidence            77899999999999977 6789999999999999999999999999888777776655310                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                               .++..+|+++++||.+||++||.+|+     +++|+++||||.+..+
T Consensus       223 ---------~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~  269 (337)
T d1o6la_         223 ---------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             ---------CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCH
Confidence                     12235699999999999999999999     4999999999987654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.5e-63  Score=458.59  Aligned_cols=262  Identities=29%  Similarity=0.434  Sum_probs=210.5

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      +.+.++|++.+.||+|+||+||+|+++.+|+.||||++.+..... ....+.+|+.+|+.++|||||+++++|.+++.+|
T Consensus         5 edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~   83 (307)
T d1a06a_           5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG-KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY   83 (307)
T ss_dssp             SCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            457889999999999999999999999999999999998654332 2345678999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc---cCCcEEEeeeccceeeCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG---SHGQLKLADFGLARIFGS  163 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~---~~~~~kl~DFG~a~~~~~  163 (397)
                      +|||||+ |+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||+.   .+|.+||+|||+|+....
T Consensus        84 lvmE~~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~  162 (307)
T d1a06a_          84 LIMQLVSGGELFDRIVEK-GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP  162 (307)
T ss_dssp             EEECCCCSCBHHHHHHTC-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred             EEEeccCCCcHHHhhhcc-cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence            9999998 6888888764 4599999999999999999999999999999999999995   478999999999987644


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      . ......+||+.|||||++.+ ..|+.++|||||||+||||++|.+||.+.+..+....+...-....           
T Consensus       163 ~-~~~~~~~GT~~y~APE~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~-----------  229 (307)
T d1a06a_         163 G-SVLSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD-----------  229 (307)
T ss_dssp             -----------CTTSCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCC-----------
T ss_pred             C-CeeeeeeeCccccCcHHHcC-CCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCC-----------
Confidence            3 33456789999999999977 5799999999999999999999999999888877777665321111           


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                   ....+.+|+++++||.+||+.||++|||++|+++||||++.
T Consensus       230 -------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         230 -------------SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             -------------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             -------------CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence                         12334679999999999999999999999999999999763

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.3e-62  Score=464.14  Aligned_cols=261  Identities=28%  Similarity=0.463  Sum_probs=229.8

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .+.++|++.+.||+|+||+||+|+++.+|+.||||++......  ....+.+|+.+|++|+|||||+++++|.+++.+|+
T Consensus        26 ~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i  103 (352)
T d1koba_          26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL--DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL  103 (352)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH--HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred             CcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            4678899999999999999999999999999999999765422  23457789999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc--cCCcEEEeeeccceeeCCCC
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG--SHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~--~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |||||+ |+|.+.+...+..+++..++.|+.||+.||+|||++||+||||||+||||+  .+|.+||+|||+|+.+.. .
T Consensus       104 vmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~-~  182 (352)
T d1koba_         104 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP-D  182 (352)
T ss_dssp             EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT-T
T ss_pred             EEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCC-C
Confidence            999998 588888877777799999999999999999999999999999999999998  568999999999998754 3


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      .......||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+..+.+..+........             
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~-------------  248 (352)
T d1koba_         183 EIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD-------------  248 (352)
T ss_dssp             SCEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC-------------
T ss_pred             CceeeccCcccccCHHHHcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-------------
Confidence            34556788999999999977 6699999999999999999999999999998888888776422211             


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                                 ...++.+|+++++||.+||+.||.+|||++|+|+||||++.
T Consensus       249 -----------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         249 -----------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             -----------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             -----------cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence                       12345679999999999999999999999999999999863

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-62  Score=450.99  Aligned_cols=264  Identities=26%  Similarity=0.433  Sum_probs=227.3

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC----ccchHHHHHHHHHhcCCCCeeEEEeeeecC
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----VNFTALREIKLLKELKSPHIIELIDAFPHK   83 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~   83 (397)
                      ..+.++|++.+.||+|+||+||+|+++.+|+.||||++.+......    ....+.+|+.+|++++|||||+++++|.++
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   85 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3477899999999999999999999999999999999987653322    234578999999999999999999999999


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC----cEEEeeeccc
Q 015948           84 GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLA  158 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~----~~kl~DFG~a  158 (397)
                      +.+|+|||||+ |+|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||++.+|    .+||+|||+|
T Consensus        86 ~~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          86 TDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CEEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence            99999999998 58888887654 599999999999999999999999999999999999998876    4999999999


Q ss_pred             eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      +..... .......+|+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+..+...-..        
T Consensus       165 ~~~~~~-~~~~~~~~t~~y~APE~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~--------  234 (293)
T d1jksa_         165 HKIDFG-NEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE--------  234 (293)
T ss_dssp             EECTTS-CBCSCCCCCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC--------
T ss_pred             hhcCCC-ccccccCCCCcccCHHHHcC-CCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--------
Confidence            887543 34456678999999999976 56899999999999999999999999998888877776543110        


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                      .....++.+|+++++||.+||+.||++|||++|+|+||||+...
T Consensus       235 ----------------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  278 (293)
T d1jksa_         235 ----------------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  278 (293)
T ss_dssp             ----------------CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred             ----------------CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence                            11233456799999999999999999999999999999998643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-62  Score=455.58  Aligned_cols=256  Identities=26%  Similarity=0.422  Sum_probs=221.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++++.||+|+||+||+|++..+|+.||||++...... ......+.+|+.+|++++|||||+++++|.+++.+|+|
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence            44699999999999999999999999999999999865433 22334578999999999999999999999999999999


Q ss_pred             EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948           90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT  169 (397)
Q Consensus        90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~  169 (397)
                      ||||.|+++..+...+..+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+....    ..
T Consensus        94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~----~~  169 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----AN  169 (309)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----BC
T ss_pred             EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC----CC
Confidence            99999877666666666799999999999999999999999999999999999999999999999999987543    34


Q ss_pred             ccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          170 HQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      ..+||+.|||||++.+  ...|+.++|||||||++|||++|.+||.+.+..+.+..+.......                
T Consensus       170 ~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~----------------  233 (309)
T d1u5ra_         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA----------------  233 (309)
T ss_dssp             CCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC----------------
T ss_pred             ccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC----------------
Confidence            5679999999999864  2458999999999999999999999999988887777766531100                


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                .....+|+++++||.+||+.||.+|||++|+|+||||..
T Consensus       234 ----------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~  272 (309)
T d1u5ra_         234 ----------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (309)
T ss_dssp             ----------CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             ----------CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcC
Confidence                      011245899999999999999999999999999999975

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-61  Score=447.07  Aligned_cols=286  Identities=40%  Similarity=0.726  Sum_probs=244.1

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCC-CcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEeeee----
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFP----   81 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~----   81 (397)
                      ..++|++++.||+|+||+||+|++..+ ++.||||+++...........+.+|+.+|+.|   +||||++++++|.    
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            358999999999999999999999766 56799999987666555566778899888776   7999999999984    


Q ss_pred             -cCCeEEEEEEccccCHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948           82 -HKGNLHLVFEFMETDLETVI-RNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR  159 (397)
Q Consensus        82 -~~~~~~lv~e~~~g~L~~~~-~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~  159 (397)
                       ...++|++||||+|+++... ......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~  164 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  164 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhh
Confidence             34579999999998766544 4445669999999999999999999999999999999999999999999999999998


Q ss_pred             eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948          160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL  239 (397)
Q Consensus       160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (397)
                      .... .......+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.++.+++..++...+......|+..
T Consensus       165 ~~~~-~~~~~~~~gT~~Y~APE~~~~-~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  242 (305)
T d1blxa_         165 IYSF-QMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  242 (305)
T ss_dssp             CCCG-GGGGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             hhcc-cccCCCcccChhhcCcchhcC-CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc
Confidence            6533 344567789999999999977 67999999999999999999999999999999999999999998887777765


Q ss_pred             CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ...+.... ......+...+...+|+++++||.+||++||++|||++|+|+||||++..
T Consensus       243 ~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         243 VALPRQAF-HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             CSSCGGGS-CCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             ccchhhhh-ccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence            55544332 22333455667778999999999999999999999999999999998753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-62  Score=442.11  Aligned_cols=256  Identities=25%  Similarity=0.378  Sum_probs=213.6

Q ss_pred             hhcce-eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec----CC
Q 015948           10 VADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH----KG   84 (397)
Q Consensus        10 ~~~~y-~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~   84 (397)
                      ..++| ++.++||+|+||+||+|+++.++..||+|++............+.+|+++|++++|||||+++++|.+    +.
T Consensus         6 ~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   85 (270)
T d1t4ha_           6 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK   85 (270)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             CCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCC
Confidence            34566 67789999999999999999999999999998765444445567899999999999999999999864    45


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEc-cCCcEEEeeecccee
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIG-SHGQLKLADFGLARI  160 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~-~~~~~kl~DFG~a~~  160 (397)
                      .+|+|||||+ |+|.+++.+. ..+++..++.++.||+.||+|||++|  |+||||||+||||+ .++.+||+|||+|+.
T Consensus        86 ~~~ivmE~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_          86 CIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEEEeCCCCCcHHHHHhcc-ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence            7899999998 5788877664 45999999999999999999999999  99999999999996 578999999999986


Q ss_pred             eCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      ...  ......+||+.|+|||++.+  .|+.++|||||||++|||++|++||.+..+...+.+.+...  ..+       
T Consensus       165 ~~~--~~~~~~~GT~~Y~aPE~~~~--~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~--~~~-------  231 (270)
T d1t4ha_         165 KRA--SFAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG--VKP-------  231 (270)
T ss_dssp             CCT--TSBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT--CCC-------
T ss_pred             ccC--CccCCcccCccccCHHHhCC--CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcC--CCC-------
Confidence            433  23446789999999999865  59999999999999999999999998877665544332210  000       


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS  295 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  295 (397)
                                      ..+....++++++||.+||+.||++|||++|+|+||||+
T Consensus       232 ----------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         232 ----------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             ----------------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             ----------------cccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence                            112234588999999999999999999999999999995

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.6e-62  Score=452.70  Aligned_cols=256  Identities=23%  Similarity=0.370  Sum_probs=223.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.+|+.++|||||+++++|.+++.+|+|
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   82 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   82 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence            4679999999999999999999999999999999976542 233445678999999999999999999999999999999


Q ss_pred             EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||||.| +|...+. ....+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.....   .
T Consensus        83 mE~~~gg~l~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~---~  158 (316)
T d1fota_          83 MDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---T  158 (316)
T ss_dssp             ECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---B
T ss_pred             eeecCCcccccccc-ccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc---c
Confidence            999996 5555554 4556899999999999999999999999999999999999999999999999999986543   3


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+||+.|+|||++.+ ..|+.++|||||||++|+|++|+.||.+.+..+.+.++...-.                   
T Consensus       159 ~~~~Gt~~Y~APE~l~~-~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~-------------------  218 (316)
T d1fota_         159 YTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-------------------  218 (316)
T ss_dssp             CCCCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-------------------
T ss_pred             ccccCcccccCHHHHcC-CCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCC-------------------
Confidence            45789999999999976 5689999999999999999999999999988888887765311                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                               .+.+.+|++++++|.+||..||.+|+     |++++++||||++..+
T Consensus       219 ---------~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~  265 (316)
T d1fota_         219 ---------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  265 (316)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             ---------CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCH
Confidence                     11234689999999999999999996     8999999999998754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-63  Score=462.38  Aligned_cols=281  Identities=27%  Similarity=0.418  Sum_probs=215.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ..++|++.+.||+|+||+||+|+++.+|+.||+|+++... .......+.+|+.+|++++|||||+++++|.+++++|+|
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            3689999999999999999999999999999999997653 233445678999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      ||||. |+|.+++.+.+ .+++..++.++.||+.||.|||+ +||+||||||+||||+.+|++||+|||+|+....  ..
T Consensus        83 mEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--~~  159 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SM  159 (322)
T ss_dssp             EECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH--HT
T ss_pred             EEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC--Cc
Confidence            99999 57888777654 59999999999999999999997 5999999999999999999999999999987633  22


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCCCC----CCCCC--
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-LGKIFAAFGTATPSQ----WPDLA--  240 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~----~~~~~--  240 (397)
                      ....+||++|+|||++.+ ..|+.++|||||||++|||++|+.||.+.+..+. ...+....+......    +....  
T Consensus       160 ~~~~~GT~~Y~APEvl~~-~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS  238 (322)
T ss_dssp             C---CCSSCCCCHHHHHC-SCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------
T ss_pred             cccccCCccccCchHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccc
Confidence            345789999999999987 5799999999999999999999999987654322 221111111111000    00000  


Q ss_pred             -----CCcc-----ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          241 -----YLPD-----YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       241 -----~~~~-----~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                           ..+.     ..... ....+.......+|.++++||.+||+.||.+|||++|+|+||||+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         239 SYGMDSRPPMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             -------CCCCHHHHHHHH-HTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             ccccccccchhHHHHHhhh-hccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence                 0000     00000 0000001111235899999999999999999999999999999975

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-60  Score=436.67  Aligned_cols=261  Identities=28%  Similarity=0.449  Sum_probs=226.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-------ccchHHHHHHHHHhcC-CCCeeEEEeeee
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-------VNFTALREIKLLKELK-SPHIIELIDAFP   81 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-------~~~~~~~E~~~l~~l~-hp~iv~l~~~~~   81 (397)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++.+......       ....+.+|+.+|++++ |||||+++++|.
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            46899999999999999999999999999999999987654322       1234678999999997 999999999999


Q ss_pred             cCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948           82 HKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus        82 ~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      +++++|||||||+ |+|.+++...+ .+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeE
Confidence            9999999999998 58999987654 599999999999999999999999999999999999999999999999999998


Q ss_pred             eCCCCCcccccccCceeeChhcccC-----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFG-----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ  235 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  235 (397)
                      +... ......+||+.|+|||++.+     ...++.++||||+||+||+|++|+.||.+.+..+....+...-....   
T Consensus       160 ~~~~-~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~---  235 (277)
T d1phka_         160 LDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG---  235 (277)
T ss_dssp             CCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---
T ss_pred             ccCC-CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCC---
Confidence            7553 34456789999999999853     34578899999999999999999999999988888777766411111   


Q ss_pred             CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                           ....+.+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       236 ---------------------~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         236 ---------------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             ---------------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             ---------------------CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence                                 1122356999999999999999999999999999999974

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-61  Score=451.13  Aligned_cols=259  Identities=24%  Similarity=0.421  Sum_probs=227.6

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL   88 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   88 (397)
                      .+.++|++.+.||+|+||+||+|+++.+|+.||||++.....   ....+.+|+++|+.++|||||+++++|++++++|+
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~---~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~l   78 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT---DQVLVKKEISILNIARHRNILHLHESFESMEELVM   78 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH---HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc---cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            578999999999999999999999999999999999975432   23357799999999999999999999999999999


Q ss_pred             EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC--CcEEEeeeccceeeCCCC
Q 015948           89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSPD  165 (397)
Q Consensus        89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~--~~~kl~DFG~a~~~~~~~  165 (397)
                      |||||+ |+|.+.+...+..+++..++.|+.||+.||+|||++||+||||||+|||++.+  +.+||+|||+++.... .
T Consensus        79 vmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~-~  157 (321)
T d1tkia_          79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-G  157 (321)
T ss_dssp             EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT-T
T ss_pred             EEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcccc-C
Confidence            999998 58999888777679999999999999999999999999999999999999854  4799999999987644 3


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      ......++|+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+..+.+..|...-...              
T Consensus       158 ~~~~~~~~t~~y~ape~~~~-~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~--------------  222 (321)
T d1tkia_         158 DNFRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--------------  222 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTT-CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--------------
T ss_pred             CcccccccccccccchhccC-CCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--------------
Confidence            34556778999999999876 568999999999999999999999999999888888887641111              


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                ....++.+|+++++||.+||..||.+|||++|+|+||||+.
T Consensus       223 ----------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         223 ----------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             ----------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             ----------ChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence                      12334567999999999999999999999999999999964

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-60  Score=444.15  Aligned_cols=290  Identities=42%  Similarity=0.756  Sum_probs=237.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--------
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--------   82 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--------   82 (397)
                      .++|.+.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|+.++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            689999999999999999999999999999999998776666666778899999999999999999998744        


Q ss_pred             CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948           83 KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG  162 (397)
Q Consensus        83 ~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~  162 (397)
                      ++++|+|||||+++++..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+.
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~  168 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  168 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecc
Confidence            45789999999998888887777789999999999999999999999999999999999999999999999999998765


Q ss_pred             CCC----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          163 SPD----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       163 ~~~----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      ...    ......+||++|+|||++.+...|+.++|||||||++|||++|++||.+.++.+.+..+....+...+..+..
T Consensus       169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  248 (318)
T d3blha1         169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN  248 (318)
T ss_dssp             C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             cccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccc
Confidence            322    2334467899999999998877899999999999999999999999999999999999999998887776655


Q ss_pred             CCCCccccccccccCC--CccccC--CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948          239 LAYLPDYVEYQYVAAP--PLRSLF--PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~--~~~~~~--~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      ................  .....+  ...+++++|||.+||+.||++|||++|+|+||||+..+.|
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~p  314 (318)
T d3blha1         249 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP  314 (318)
T ss_dssp             CCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSCC
T ss_pred             cchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCCCC
Confidence            4433222222111111  111000  1237889999999999999999999999999999865443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.7e-61  Score=453.37  Aligned_cols=256  Identities=24%  Similarity=0.380  Sum_probs=225.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.+|+.++|||||+++++|.+...+|+|
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v  119 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence            5899999999999999999999999999999999976442 233445678999999999999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      |||+. |+|...+.+.+ .+++..++.|+.||+.||.|||++||+||||||+||||+.+|++||+|||+|+.+...   .
T Consensus       120 ~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~---~  195 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---T  195 (350)
T ss_dssp             EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---B
T ss_pred             cccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc---c
Confidence            99998 57777776654 5999999999999999999999999999999999999999999999999999987543   3


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+||+.|||||++.+ ..|+.++|||||||++|||++|++||.+.+....+.++.....                   
T Consensus       196 ~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~-------------------  255 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-------------------  255 (350)
T ss_dssp             CCCEECGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-------------------
T ss_pred             ccccCccccCCHHHHcC-CCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCC-------------------
Confidence            45789999999999987 6789999999999999999999999999988888877765311                   


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                               .....+|+++.+||.+||..||.+|+     |++++++||||.+..+
T Consensus       256 ---------~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~  302 (350)
T d1rdqe_         256 ---------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             ---------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             ---------CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCH
Confidence                     11234689999999999999999995     8999999999998765

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-60  Score=436.10  Aligned_cols=287  Identities=47%  Similarity=0.809  Sum_probs=251.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++++.||+|+||+||+|++..+|+.||||+++...........+.+|+.+|+.++||||++++++|.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            68999999999999999999999999999999998776656666778899999999999999999999999999999999


Q ss_pred             ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948           92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ  171 (397)
Q Consensus        92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~  171 (397)
                      ++.|+++..+......+++..++.++.|++.||+|||++||+||||||+||||+.++.+||+|||.|+............
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~  161 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE  161 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceee
Confidence            99987777777777789999999999999999999999999999999999999999999999999999887766666667


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC-CCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP-FLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      .++++|+|||++.+...++.++|||||||++|||++|+. +|.+.+..+.+..+....+......|+.............
T Consensus       162 ~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (292)
T d1unla_         162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM  241 (292)
T ss_dssp             CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred             ccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccccc
Confidence            788899999999876778999999999999999999875 4677777888888999988888888877655554433322


Q ss_pred             cc-CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          251 VA-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       251 ~~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      .. ........+.+++++++||.+||+.||.+|||++|+|+||||++..
T Consensus       242 ~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             ccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            22 2234455677899999999999999999999999999999998643

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-61  Score=450.13  Aligned_cols=258  Identities=26%  Similarity=0.424  Sum_probs=224.4

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHH-hcCCCCeeEEEeeeecCCeEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLK-ELKSPHIIELIDAFPHKGNLHLV   89 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~-~l~hp~iv~l~~~~~~~~~~~lv   89 (397)
                      ++|++.+.||+|+||+||+|+++.+|+.||||++++... .......+.+|+.++. .++|||||+++++|.+++.+|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            679999999999999999999999999999999976532 2233345667777665 68999999999999999999999


Q ss_pred             EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948           90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF  168 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~  168 (397)
                      ||||+ |+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+.........
T Consensus        82 mEy~~~g~L~~~i~~~-~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~  160 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT  160 (320)
T ss_dssp             EECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EeecCCCcHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccc
Confidence            99998 5888887654 459999999999999999999999999999999999999999999999999999876666666


Q ss_pred             cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.+..+.+..+....    +               
T Consensus       161 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~----~---------------  220 (320)
T d1xjda_         161 NTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN----P---------------  220 (320)
T ss_dssp             CCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC----C---------------
T ss_pred             cccCCCCCcCCHHHHcC-CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----C---------------
Confidence            77889999999999987 568999999999999999999999999998888777775421    0               


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHH-HHhcCCCCCCCCC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ-QALEHRYFSSAPL  299 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~-e~l~hp~~~~~~~  299 (397)
                               .+.+.+|+++++||.+||+.||.+|||+. ++++||||++..+
T Consensus       221 ---------~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~~  263 (320)
T d1xjda_         221 ---------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  263 (320)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             ---------CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccCCH
Confidence                     11234689999999999999999999995 8999999987654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.2e-60  Score=451.12  Aligned_cols=261  Identities=26%  Similarity=0.413  Sum_probs=216.8

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHH---HHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALR---EIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~---E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.+.... ......+.+   |+.+++.++|||||+++++|.+++.+
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            46799999999999999999999999999999999754321 112222333   46777778899999999999999999


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      |+|||||. |+|..++.+.. .+++..++.|+.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.+... 
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~-  160 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-  160 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS-
T ss_pred             EEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCC-
Confidence            99999998 68888887654 5899999999999999999999999999999999999999999999999999987543 


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                       .....+||+.|+|||++.+...|+.++|||||||+||||++|++||.+.+..+... +........             
T Consensus       161 -~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~~~~-------------  225 (364)
T d1omwa3         161 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMA-------------  225 (364)
T ss_dssp             -CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSSSCC-------------
T ss_pred             -cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcccCC-------------
Confidence             34566899999999999766779999999999999999999999998765433322 222211111             


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL  299 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~  299 (397)
                                 ..++..+|+++++||.+||+.||++|||     ++|+++||||++..|
T Consensus       226 -----------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~  273 (364)
T d1omwa3         226 -----------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  273 (364)
T ss_dssp             -----------CCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCH
T ss_pred             -----------CCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCH
Confidence                       1222356999999999999999999999     799999999998764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-60  Score=450.05  Aligned_cols=284  Identities=36%  Similarity=0.586  Sum_probs=233.0

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----   84 (397)
                      +.++|++++.||+|+||+||+|+++.+|+.||||++++..........+.+|+.+|+.++|||||+++++|...+     
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            789999999999999999999999999999999999765544444556789999999999999999999997654     


Q ss_pred             -eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 -NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 -~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                       ++|+|||||+++|...+...  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        96 ~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_          96 TDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS  173 (346)
T ss_dssp             CCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             ceEEEEEecccccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCC
Confidence             57999999988888777654  499999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                         ..+..++|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+......+.......
T Consensus       174 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (346)
T d1cm8a_         174 ---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE  250 (346)
T ss_dssp             ---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred             ---ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchh
Confidence               34567899999999999886778999999999999999999999999999999999888887765433222111100


Q ss_pred             cc---cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          244 DY---VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       244 ~~---~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ..   ..........+....+.+|+++++||.+||..||++|||++|+|+||||+...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         251 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            00   00111223345566778899999999999999999999999999999998754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-59  Score=444.53  Aligned_cols=281  Identities=34%  Similarity=0.575  Sum_probs=228.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee------cCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP------HKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~------~~~   84 (397)
                      .-+|...++||+|+||+||+|++..+|+.||||++.....      ...+|+.+|++++||||++++++|.      +..
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCC
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCce
Confidence            3479999999999999999999999999999999975432      1237999999999999999999984      344


Q ss_pred             eEEEEEEccccCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeecccee
Q 015948           85 NLHLVFEFMETDLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARI  160 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~  160 (397)
                      ++|+|||||+|++...+.   .....+++..++.|++||+.||+|||++||+||||||+||||+.++ .+||+|||+++.
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~  172 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  172 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhh
Confidence            689999999987766554   3455699999999999999999999999999999999999999775 899999999987


Q ss_pred             eCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      .... ......+||+.|+|||++.+...|+.++|||||||++|||++|++||.+.+..+.+..++..++......|....
T Consensus       173 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~  251 (350)
T d1q5ka_         173 LVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN  251 (350)
T ss_dssp             CCTT-SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred             ccCC-cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhc
Confidence            7543 334556889999999999877789999999999999999999999999999999999999888775543332111


Q ss_pred             CCccccccccccC-CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          241 YLPDYVEYQYVAA-PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       241 ~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      .......+..... +......+.+++++++||.+||.+||++|||++|+|+||||+...
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             C---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             cchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence            1000000111111 112233456799999999999999999999999999999998643

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-60  Score=435.62  Aligned_cols=252  Identities=25%  Similarity=0.381  Sum_probs=213.1

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC----CccchHHHHHHHHHhcC--CCCeeEEEeeeecC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE----GVNFTALREIKLLKELK--SPHIIELIDAFPHK   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~E~~~l~~l~--hp~iv~l~~~~~~~   83 (397)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++.+.....    .....+.+|+.+|++++  |||||+++++|.++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~   81 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP   81 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence            5689999999999999999999999999999999998654322    12234568999999997  89999999999999


Q ss_pred             CeEEEEEEcccc--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeecccee
Q 015948           84 GNLHLVFEFMET--DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARI  160 (397)
Q Consensus        84 ~~~~lv~e~~~g--~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~  160 (397)
                      +.+|+||||+.|  ++...+.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+.
T Consensus        82 ~~~~lv~e~~~~~~~l~~~~~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          82 DSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CeEEEEEEeccCcchHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECcccccee
Confidence            999999999973  666666654 459999999999999999999999999999999999999854 7999999999987


Q ss_pred             eCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       161 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      ...  ......+||+.|+|||++.+...++.++|||||||++|||++|+.||.+.+      .+....            
T Consensus       161 ~~~--~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~------------  220 (273)
T d1xwsa_         161 LKD--TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQ------------  220 (273)
T ss_dssp             CCS--SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCC------------
T ss_pred             ccc--ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhcc------------
Confidence            543  334567899999999999876667888999999999999999999997642      122210            


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                                      ..+.+.+|+++++||.+||+.||++|||++|+|+||||++..
T Consensus       221 ----------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         221 ----------------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             ----------------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             ----------------cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence                            012235689999999999999999999999999999998754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-59  Score=438.50  Aligned_cols=260  Identities=25%  Similarity=0.422  Sum_probs=211.2

Q ss_pred             hhhhcceeeee-eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec---
Q 015948            8 KKVADRYLKRE-VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH---   82 (397)
Q Consensus         8 ~~~~~~y~i~~-~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~---   82 (397)
                      ..+.++|.+.+ .||+|+||+||+|++..+|+.||||+++..       ..+.+|+.++.++ +|||||+++++|++   
T Consensus         7 ~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~   79 (335)
T d2ozaa1           7 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYA   79 (335)
T ss_dssp             SCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             CCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeeccc
Confidence            34678898875 699999999999999999999999998632       3567899987655 89999999999865   


Q ss_pred             -CCeEEEEEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---CCcEEEeeec
Q 015948           83 -KGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFG  156 (397)
Q Consensus        83 -~~~~~lv~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~~~~kl~DFG  156 (397)
                       +.++|+|||||+ |+|.+++.+.+ ..+++..++.|+.||+.||+|||++||+||||||+|||++.   .+.+||+|||
T Consensus        80 ~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG  159 (335)
T d2ozaa1          80 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  159 (335)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             CCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccc
Confidence             567999999998 69999988753 46999999999999999999999999999999999999985   4679999999


Q ss_pred             cceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          157 LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      +|+..... ......+||+.|+|||++.+ ..|+.++|||||||+||+|++|++||.+.+.......+.........   
T Consensus       160 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~---  234 (335)
T d2ozaa1         160 FAKETTSH-NSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY---  234 (335)
T ss_dssp             TCEECCCC-CCCCCCSCCCSSCCCCCCCG-GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSS---
T ss_pred             eeeeccCC-CccccccCCcccCCcHHHcC-CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCC---
Confidence            99877543 34556789999999999976 56999999999999999999999999887765554444332111100   


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS  296 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  296 (397)
                                     ..+  ...++.+|+++++||.+||+.||++|||+.|+++||||..
T Consensus       235 ---------------~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  277 (335)
T d2ozaa1         235 ---------------EFP--NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  277 (335)
T ss_dssp             ---------------SCC--TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHT
T ss_pred             ---------------CCC--CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhC
Confidence                           000  1112346899999999999999999999999999999964

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-58  Score=436.66  Aligned_cols=286  Identities=37%  Similarity=0.627  Sum_probs=230.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----C
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----G   84 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~   84 (397)
                      +.++|++++.||+|+||+||+|+++.+|+.||||++.+... ......+++|+.+|++++||||+++++++...     .
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcC-hHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence            56789999999999999999999999999999999975432 22334678999999999999999999998654     3


Q ss_pred             eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948           85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP  164 (397)
Q Consensus        85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~  164 (397)
                      ++|+++++++|+|.+++...  .+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.....
T Consensus        85 ~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_          85 DVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  162 (345)
T ss_dssp             CEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             eEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCC
Confidence            57888877778999998765  4999999999999999999999999999999999999999999999999999876432


Q ss_pred             C---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          165 D---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       165 ~---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .   ......+||+.|+|||++.....|+.++||||+||++|+|++|++||.+.+..+....+...+.............
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (345)
T d1pmea_         163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  242 (345)
T ss_dssp             GCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhh
Confidence            2   2345677899999999997767789999999999999999999999999988888888777655443221111000


Q ss_pred             Ccc---ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          242 LPD---YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       242 ~~~---~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ...   ..........++...++.+|+++++||.+||+.||.+|||++|+|+||||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence            000   001112233345567788999999999999999999999999999999998543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-58  Score=419.23  Aligned_cols=255  Identities=20%  Similarity=0.280  Sum_probs=211.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|+..   ..||||+++...........+.+|+.+|++++|||||++++++. ++.+|+||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~   82 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT   82 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEE
Confidence            478999999999999999999643   46999999876655555667889999999999999999999874 45689999


Q ss_pred             Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--Cc
Q 015948           91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RR  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--~~  167 (397)
                      |||+ |+|.+++...+..+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+......  ..
T Consensus        83 Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~  162 (276)
T d1uwha_          83 QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ  162 (276)
T ss_dssp             ECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC---------
T ss_pred             ecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCccc
Confidence            9998 68999998877789999999999999999999999999999999999999999999999999998764322  33


Q ss_pred             ccccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948          168 FTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY  245 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  245 (397)
                      .....||+.|||||++.+.  ..|+.++|||||||++|||++|+.||.+.+....+..+.....                
T Consensus       163 ~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~----------------  226 (276)
T d1uwha_         163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY----------------  226 (276)
T ss_dssp             ---CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTS----------------
T ss_pred             ccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCC----------------
Confidence            4556789999999998642  3589999999999999999999999999887776665554311                


Q ss_pred             cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                            ..+........+++++.+||.+||+.||++|||++|++++
T Consensus       227 ------~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         227 ------LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             ------CCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                  1122234445678999999999999999999999999876

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-58  Score=435.14  Aligned_cols=284  Identities=36%  Similarity=0.578  Sum_probs=228.7

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec------C
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------K   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------~   83 (397)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++.+..........+.+|+.+|++++|||||+++++|..      .
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~   95 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   95 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence            3579999999999999999999999999999999998665444444567899999999999999999999853      3


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      ..+|+++++++|+|.+++...  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+|++|||++.... 
T Consensus        96 ~~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~-  172 (348)
T d2gfsa1          96 NDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-  172 (348)
T ss_dssp             CCCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCT-
T ss_pred             ceEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccC-
Confidence            345666666667898887543  49999999999999999999999999999999999999999999999999998653 


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                        .......|++.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+....+......+.......
T Consensus       173 --~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  250 (348)
T d2gfsa1         173 --DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES  250 (348)
T ss_dssp             --GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHH
T ss_pred             --cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchh
Confidence              344567789999999998887778999999999999999999999999999999999998887764432221111100


Q ss_pred             cc---cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948          244 DY---VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP  298 (397)
Q Consensus       244 ~~---~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  298 (397)
                      ..   ..........+...+..+|+++++||.+||..||.+|||++|+|+||||+...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         251 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             HHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence            00   00111122334455678899999999999999999999999999999998653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.8e-58  Score=420.25  Aligned_cols=261  Identities=23%  Similarity=0.359  Sum_probs=210.0

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCC--
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKG--   84 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--   84 (397)
                      ..|.++|++.+.||+|+||+||+|++..+|+.||||+++...... .....+.+|+.+|+.++|||||++++++...+  
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~   82 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA   82 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSS
T ss_pred             cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCC
Confidence            467899999999999999999999999999999999998654432 23446789999999999999999999987643  


Q ss_pred             --eEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948           85 --NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF  161 (397)
Q Consensus        85 --~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~  161 (397)
                        .+|+|||||+| +|...+... ..+++..++.++.||+.||+|||++||+||||||+||||+.++.++|+|||.+...
T Consensus        83 ~~~~~lvmE~~~g~~L~~~~~~~-~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          83 GPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             SEEEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             CceEEEEEECCCCCEehhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhh
Confidence              48999999995 677666554 45999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCC---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948          162 GSPD---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD  238 (397)
Q Consensus       162 ~~~~---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (397)
                      ....   ......+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+.++...-..        
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~--------  232 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI--------  232 (277)
T ss_dssp             C----------------TTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC--------
T ss_pred             ccccccccccccccCcccccCHHHHcC-CCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCC--------
Confidence            4332   24456679999999999976 56899999999999999999999999998888777776553111        


Q ss_pred             CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948          239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF  294 (397)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  294 (397)
                                      +.....+.+|+++.+||.+||+.||.+||+..+.+.|+|.
T Consensus       233 ----------------~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         233 ----------------PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  272 (277)
T ss_dssp             ----------------CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             ----------------CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence                            1123345679999999999999999999954444445553

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-58  Score=435.89  Aligned_cols=283  Identities=33%  Similarity=0.519  Sum_probs=221.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee------cC
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP------HK   83 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~------~~   83 (397)
                      +.++|+++++||+|+||+||+|+++.+|+.||||++............+.+|+.+|++++|||||+++++|.      ..
T Consensus        15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~   94 (355)
T d2b1pa1          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF   94 (355)
T ss_dssp             EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence            458999999999999999999999999999999999876554444456789999999999999999999995      34


Q ss_pred             CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      .++|+|||||.|+++..+..   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||+++....
T Consensus        95 ~~~~iv~Ey~~~~l~~~~~~---~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~  171 (355)
T d2b1pa1          95 QDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_dssp             CEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             ceeEEEEeccchHHHHhhhc---CCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccc
Confidence            78999999999998887753   489999999999999999999999999999999999999999999999999887644


Q ss_pred             CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                       .......++|+.|+|||++.+ ..++.++||||+||++|+|++|++||.+.+....+.+++...+...+..|.......
T Consensus       172 -~~~~~~~~~t~~y~aPE~l~~-~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (355)
T d2b1pa1         172 -SFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  249 (355)
T ss_dssp             ----------CCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHH
T ss_pred             -ccccccccccccccChhhhcC-CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhH
Confidence             334556678999999999987 679999999999999999999999999999999999998887766554433221100


Q ss_pred             ccc--------------ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948          244 DYV--------------EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA  297 (397)
Q Consensus       244 ~~~--------------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  297 (397)
                      ...              .......+.........|+++++||.+||..||++|||++|+|+||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             HHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            000              000000000111112246789999999999999999999999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.3e-57  Score=427.66  Aligned_cols=280  Identities=31%  Similarity=0.542  Sum_probs=217.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeec--CCeE
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPH--KGNL   86 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~--~~~~   86 (397)
                      ..++|++++.||+|+||+||+|+++.+|+.||||++....     ...+.+|+.+|+.++ ||||++++++|..  ..++
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence            3688999999999999999999999999999999986432     346778999999996 9999999999974  4679


Q ss_pred             EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCC
Q 015948           87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSP  164 (397)
Q Consensus        87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~  164 (397)
                      |+|||||.+ +|...    ...+++..++.+++||+.||+|||++||+||||||+||||+.++ .+||+|||+|+.....
T Consensus       108 ~~v~e~~~~~~L~~~----~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         108 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             EEEEECCCSCBGGGT----TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             eEEEeecCCCcHHHH----hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            999999995 55433    23499999999999999999999999999999999999998755 6999999999876543


Q ss_pred             CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                       ......++|+.|+|||++.+...|+.++|||||||++|+|++|+.||.... ..++...+...++......+.......
T Consensus       184 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  262 (328)
T d3bqca1         184 -QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  262 (328)
T ss_dssp             -CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             -CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence             345667889999999999887779999999999999999999998886654 455556665555421111110000000


Q ss_pred             cccccccc----cCC-----CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948          244 DYVEYQYV----AAP-----PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL  299 (397)
Q Consensus       244 ~~~~~~~~----~~~-----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  299 (397)
                      ....+...    ...     ........+|++++|||.+||.+||++|||++|+|+||||++..+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            00000000    000     011122346899999999999999999999999999999987654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-57  Score=409.09  Aligned_cols=248  Identities=23%  Similarity=0.371  Sum_probs=203.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||+||+|++. +++.||||+++....   ....+.+|++++++++|||||++++++.+++.+|+|||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E   80 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   80 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC---cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEE
Confidence            57999999999999999999986 567899999875332   33468899999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-ccc
Q 015948           92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~~  169 (397)
                      ||+ |+|.+++......+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+....... ...
T Consensus        81 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~  160 (263)
T d1sm2a_          81 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  160 (263)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred             ecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence            998 688888888777799999999999999999999999999999999999999999999999999987654432 233


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...||..|+|||++.+ ..|+.++|||||||++|||++ |.+||...+..+.+..+........                
T Consensus       161 ~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~----------------  223 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----------------  223 (263)
T ss_dssp             ----CTTSCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC----------------
T ss_pred             ceecCcccCChHHhcC-CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC----------------
Confidence            4568889999999976 569999999999999999998 6788887777777776655322111                


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                 ....++++.+||.+||+.||++|||++|+++|
T Consensus       224 -----------p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         224 -----------PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                       12347899999999999999999999999975

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.5e-57  Score=415.88  Aligned_cols=250  Identities=22%  Similarity=0.347  Sum_probs=208.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|+++.+|+.||||+++....   ....+.+|+.+|++++|||||+++++|.+++.+|+||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc---hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence            4689999999999999999999999999999999865432   3346889999999999999999999999999999999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-c
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~  167 (397)
                      |||+ |+|...+.+. ...+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+....... .
T Consensus        93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~  172 (287)
T d1opja_          93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  172 (287)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred             ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence            9998 6888888654 45699999999999999999999999999999999999999999999999999987654332 2


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE  247 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
                      .....|+..|+|||++.+ ..|+.++|||||||++|||++|..||....+...+..++..-.  .               
T Consensus       173 ~~~~~g~~~y~aPE~~~~-~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~--~---------------  234 (287)
T d1opja_         173 HAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--R---------------  234 (287)
T ss_dssp             ETTEEECGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC--C---------------
T ss_pred             eccccccccccChHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCC--C---------------
Confidence            334457888999999976 5699999999999999999996544444444443333332100  0               


Q ss_pred             cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                               ......+++++++||.+||+.||++|||++|+++
T Consensus       235 ---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         235 ---------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                     0122356899999999999999999999999976

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.6e-57  Score=415.34  Aligned_cols=252  Identities=19%  Similarity=0.308  Sum_probs=201.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|++.+.||+|+||+||+|+++.+|+   .||||.+...... .....+.+|+.+|++++|||||++++++.+++.+|
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  103 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE-KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVM  103 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCH-HHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            5789999999999999999999987765   5888887644322 23346789999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +|||||+ |+|..++......+++..+..++.||+.||.|||++||+||||||+||||+.++++||+|||+|+.......
T Consensus       104 iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  183 (299)
T d1jpaa_         104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  183 (299)
T ss_dssp             EEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCC
Confidence            9999998 578888887777799999999999999999999999999999999999999999999999999987644322


Q ss_pred             c-----ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948          167 R-----FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA  240 (397)
Q Consensus       167 ~-----~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (397)
                      .     .....+|+.|+|||++.+ ..|+.++|||||||++|||++ |.+||.+.+..+.+..+.......         
T Consensus       184 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---------  253 (299)
T d1jpaa_         184 DPTYTSALGGKIPIRWTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP---------  253 (299)
T ss_dssp             ------------CGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---------
T ss_pred             cceeeecccccCCccccCHHHHhc-CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------
Confidence            1     223456888999999976 569999999999999999998 899999988877777665432111         


Q ss_pred             CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                        ....++.++.+||.+||+.||++|||+.|++++
T Consensus       254 ------------------~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         254 ------------------PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             ------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ------------------CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                              113458999999999999999999999998764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-56  Score=418.57  Aligned_cols=252  Identities=23%  Similarity=0.331  Sum_probs=210.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCc-----EEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCe
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGN   85 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~   85 (397)
                      ++|++.+.||+|+||+||+|++..+++     .||+|.+..... ......+.+|+.+|+++ +|||||+++++|.+.+.
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC-HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            789999999999999999999876554     699998865433 23345678999999998 89999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC----------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcE
Q 015948           86 LHLVFEFME-TDLETVIRNTN----------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNL  142 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~----------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NI  142 (397)
                      +|+|||||+ |+|.+++.+..                      ..+++..++.|+.||+.||+|||++||+||||||+||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Ni  195 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV  195 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGE
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcc
Confidence            999999998 68999987653                      2488999999999999999999999999999999999


Q ss_pred             EEccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015948          143 LIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDID  219 (397)
Q Consensus       143 Ll~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~  219 (397)
                      |++.++.+||+|||+|+.......  ......||+.|||||++.+ ..|+.++|||||||++|||++ |.+||.+.+...
T Consensus       196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~  274 (325)
T d1rjba_         196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  274 (325)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcC-CCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999987654432  2345667999999999976 569999999999999999997 899999887766


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      .+.+++..-...                          .....+|+++++||.+||+.||++|||++||++|
T Consensus       275 ~~~~~~~~~~~~--------------------------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         275 NFYKLIQNGFKM--------------------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHHHHHTTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhcCCCC--------------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            666665431110                          1123458999999999999999999999999975

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-56  Score=403.15  Aligned_cols=248  Identities=20%  Similarity=0.298  Sum_probs=215.2

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE   91 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e   91 (397)
                      ++|++.+.||+|+||+||+|+++ +++.||||++++...   ....+++|+.++++++|||||+++++|.+++.+|+|||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~E   79 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   79 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS---CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC---CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Confidence            57899999999999999999984 778999999986443   23468899999999999999999999999999999999


Q ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-ccc
Q 015948           92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFT  169 (397)
Q Consensus        92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~~  169 (397)
                      |+. |+|..++......+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....... ...
T Consensus        80 y~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             CCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred             ccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence            998 688888887777799999999999999999999999999999999999999999999999999987654332 333


Q ss_pred             ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948          170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY  248 (397)
Q Consensus       170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  248 (397)
                      ...+|..|+|||++.+ ..|+.++|||||||++|||++ |+.||.+.+..+....+.+......                
T Consensus       160 ~~~~t~~y~aPE~~~~-~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------  222 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------------  222 (258)
T ss_dssp             CSCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC----------------
T ss_pred             ccCCCCCcCCcHHhcC-CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----------------
Confidence            4668889999999976 568999999999999999998 8999999988887777654321111                


Q ss_pred             ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                 +...++++.+||.+||+.||++|||++++++|
T Consensus       223 -----------p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         223 -----------PHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             -----------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -----------cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                       12347899999999999999999999999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-56  Score=409.61  Aligned_cols=255  Identities=22%  Similarity=0.354  Sum_probs=212.8

Q ss_pred             hcceeeeee-eeecCcEEEEEEEECC--CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREV-LGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~-LG~G~~g~Vy~a~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|.+.+. ||+|+||+||+|.++.  ++..||||++..... ......+.+|+++|++++|||||++++++.+ +.+|
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~   84 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM   84 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcC-HHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEE
Confidence            367888885 9999999999998754  445799999975432 2234567899999999999999999999965 4689


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +|||||+ |+|.+++...+..+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.+.....
T Consensus        85 lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  164 (285)
T d1u59a_          85 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  164 (285)
T ss_dssp             EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             EEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccccccc
Confidence            9999999 588888877777799999999999999999999999999999999999999999999999999998755432


Q ss_pred             ---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 ---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                         ......||+.|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+......            
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~------------  231 (285)
T d1u59a_         165 YYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM------------  231 (285)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC------------
T ss_pred             ccccccccccCccccChHHHhC-CCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------
Confidence               2234567888999999976 568999999999999999998 89999998888777666542111            


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHH---hcCCCCC
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA---LEHRYFS  295 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~---l~hp~~~  295 (397)
                                     ...+.+++++.+||.+||+.||++|||+.++   |+|+|++
T Consensus       232 ---------------~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         232 ---------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             ---------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---------------CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                           1223568999999999999999999999887   5677764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-57  Score=410.00  Aligned_cols=253  Identities=21%  Similarity=0.362  Sum_probs=210.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|+++ ++..||||++....   .....+.+|+.+|++++|||||++++++.+ +.+|+||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~   86 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT   86 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc---CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence            478999999999999999999975 57889999986543   223468899999999999999999998854 5679999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-c
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~  167 (397)
                      |||+ |+|.+.+... +..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+|+....... .
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~  166 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA  166 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCcccc
Confidence            9998 6777766443 23589999999999999999999999999999999999999999999999999998754432 3


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....||+.|+|||++.+ ..|+.++|||||||++|||+| |.+||...+..+.+..+......                
T Consensus       167 ~~~~~gt~~y~APE~~~~-~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~----------------  229 (272)
T d1qpca_         167 REGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM----------------  229 (272)
T ss_dssp             CTTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC----------------
T ss_pred             ccccCCcccccChHHHhC-CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC----------------
Confidence            344568889999999976 568999999999999999998 56777777766666665432111                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc--CCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE--HRYFSS  296 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~--hp~~~~  296 (397)
                                 .....+++++.+||.+||+.||++|||++|+++  |+||++
T Consensus       230 -----------~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         230 -----------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----------CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence                       112345899999999999999999999999998  788754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-56  Score=408.85  Aligned_cols=247  Identities=21%  Similarity=0.348  Sum_probs=200.7

Q ss_pred             eeeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948           18 EVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-   94 (397)
Q Consensus        18 ~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-   94 (397)
                      ++||+|+||+||+|.+.  .+++.||||+++...........+.+|+.+|++++|||||++++++.++ ..|+|||||+ 
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCC
Confidence            46999999999999764  4567899999976544444455788999999999999999999999654 5789999998 


Q ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc---cccc
Q 015948           95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FTHQ  171 (397)
Q Consensus        95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~---~~~~  171 (397)
                      |+|.+++.+. ..+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.+......   ....
T Consensus        92 g~L~~~l~~~-~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~  170 (277)
T d1xbba_          92 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  170 (277)
T ss_dssp             EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----
T ss_pred             CcHHHHHhhc-cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccccccccc
Confidence            5787777654 45999999999999999999999999999999999999999999999999999876544322   2345


Q ss_pred             ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948          172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY  250 (397)
Q Consensus       172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (397)
                      .||+.|+|||++.+ ..|+.++|||||||++|||++ |++||.+.+..+....+.+....                    
T Consensus       171 ~gt~~y~APE~l~~-~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~--------------------  229 (277)
T d1xbba_         171 KWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM--------------------  229 (277)
T ss_dssp             CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC--------------------
T ss_pred             CCCceecCchhhcC-CCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC--------------------
Confidence            67889999999976 568999999999999999997 89999998877666655432110                    


Q ss_pred             ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh---cCCCC
Q 015948          251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL---EHRYF  294 (397)
Q Consensus       251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l---~hp~~  294 (397)
                             .....+|+++.+||.+||+.||++|||+++++   +|+|+
T Consensus       230 -------~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         230 -------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             -------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             -------CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence                   11234589999999999999999999999984   56554

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-56  Score=417.71  Aligned_cols=264  Identities=25%  Similarity=0.416  Sum_probs=218.7

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCc--cCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELKS-PHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~--~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~   84 (397)
                      .++|++.+.||+|+||+||+|++.   .+|+.||||++.+...  .......+.+|+++|++++| |||+++++++.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            588999999999999999999974   4689999999875432  22334456789999999977 89999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948           85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS  163 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~  163 (397)
                      .+|+||||+. |+|...+...+ .+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.+..
T Consensus       103 ~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  181 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             ceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcc
Confidence            9999999999 58888877654 478999999999999999999999999999999999999999999999999987643


Q ss_pred             CC-CcccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          164 PD-RRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       164 ~~-~~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .. .......|++.|+|||++.+.. .++.++|||||||+||+|++|..||.+.+..+....+........+        
T Consensus       182 ~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~--------  253 (322)
T d1vzoa_         182 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--------  253 (322)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC--------
T ss_pred             cccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCC--------
Confidence            32 3345667899999999997643 4788999999999999999999999887665555555443211111        


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL  299 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~  299 (397)
                                      .++..+|+++++||.+||+.||.+||     |++|+++||||+...+
T Consensus       254 ----------------~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~  300 (322)
T d1vzoa_         254 ----------------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  300 (322)
T ss_dssp             ----------------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             ----------------CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCH
Confidence                            12235689999999999999999999     5899999999987654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-55  Score=402.79  Aligned_cols=251  Identities=24%  Similarity=0.390  Sum_probs=201.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC---cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG---QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|++.+.||+|+||+||+|++..++   ..||||.++.... ......+.+|+.+|++++|||||++++++. ++.+|
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~   83 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   83 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEE
Confidence            478999999999999999999987654   4688888754322 223446789999999999999999999995 56789


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-  165 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-  165 (397)
                      +|||||. |+|..++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...... 
T Consensus        84 iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~  163 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  163 (273)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred             EEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence            9999998 67888888777789999999999999999999999999999999999999999999999999998765433 


Q ss_pred             CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948          166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD  244 (397)
Q Consensus       166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  244 (397)
                      .......||+.|+|||++.+ ..|+.++|||||||++|||++ |.+||.+.+..+.+..+.....               
T Consensus       164 ~~~~~~~gt~~y~apE~l~~-~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~---------------  227 (273)
T d1mp8a_         164 YKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER---------------  227 (273)
T ss_dssp             -------CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC---------------
T ss_pred             eeccceecCcccchhhHhcc-CCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------------
Confidence            23445667889999999976 569999999999999999997 8999999888777776654311               


Q ss_pred             ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                  ...++.+|+++.+||.+||..||++|||++|+++|
T Consensus       228 ------------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         228 ------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             ------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                        11234568999999999999999999999999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-55  Score=400.87  Aligned_cols=254  Identities=23%  Similarity=0.398  Sum_probs=206.0

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF   90 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   90 (397)
                      .++|++.+.||+|+||+||+|+++.+ ..||||++.....   ....+.+|+.+|++++|||||++++++.+ +.+|+||
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~   90 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT   90 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC---CHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEE
Confidence            47899999999999999999998755 5799999875433   23468899999999999999999999955 5578999


Q ss_pred             Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Cc
Q 015948           91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RR  167 (397)
Q Consensus        91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~  167 (397)
                      |||. |+|...+... ...+++..+..++.||+.||+|||++||+||||||+||||+.++++||+|||+|+...... ..
T Consensus        91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~  170 (285)
T d1fmka3          91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  170 (285)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCcee
Confidence            9999 5677776543 3459999999999999999999999999999999999999999999999999998764333 23


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....+|+.|+|||++.+ ..++.++|||||||++|||++ |.++|.+....+.+..+......                
T Consensus       171 ~~~~~gt~~y~aPE~~~~-~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~----------------  233 (285)
T d1fmka3         171 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM----------------  233 (285)
T ss_dssp             -----CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC----------------
T ss_pred             eccccccccccChHHHhC-CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC----------------
Confidence            344668899999999976 568999999999999999998 56777777776666666543111                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc--CCCCCCC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE--HRYFSSA  297 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~--hp~~~~~  297 (397)
                                 ...+.+++++++||.+||+.||++||+++++++  ++||++.
T Consensus       234 -----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         234 -----------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             -----------CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence                       122355899999999999999999999999988  8899764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-55  Score=405.97  Aligned_cols=250  Identities=22%  Similarity=0.358  Sum_probs=204.0

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      ++|++.+.||+|+||+||+|++..+|+    .||+|.+.... .......+.+|+.+|++++|||||++++++.++. .+
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~   86 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   86 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-EE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-ee
Confidence            469999999999999999999988886    47777775432 2333456889999999999999999999998765 55


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +++||+. |+|.+.+......+++..+..|+.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.......
T Consensus        87 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  166 (317)
T d1xkka_          87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK  166 (317)
T ss_dssp             EEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC
T ss_pred             EEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccc
Confidence            6667666 789999988888899999999999999999999999999999999999999999999999999987654333


Q ss_pred             c--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948          167 R--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP  243 (397)
Q Consensus       167 ~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  243 (397)
                      .  .....||+.|+|||++.+ ..|+.++|||||||++|||+| |.+||.+.+..+....+......             
T Consensus       167 ~~~~~~~~gt~~y~APE~l~~-~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~-------------  232 (317)
T d1xkka_         167 EYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL-------------  232 (317)
T ss_dssp             --------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCC-------------
T ss_pred             cccccccccCccccChHHHhc-CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-------------
Confidence            2  233467899999999977 569999999999999999998 89999988777666655443111             


Q ss_pred             cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                    ...+.+++++.+||.+||+.||.+|||+.|+++|
T Consensus       233 --------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         233 --------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             --------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence                          1123458999999999999999999999999987

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-54  Score=398.40  Aligned_cols=250  Identities=20%  Similarity=0.327  Sum_probs=199.8

Q ss_pred             cceeeeeeeeecCcEEEEEEEECCCC----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948           12 DRYLKREVLGEGTYGVVYKAIDTKTG----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   87 (397)
                      +.|.+.++||+|+||+||+|.++.++    ..||||++...... .....+++|+.+|++++|||||++++++.+.+.++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccCh-HHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            46999999999999999999877654    46999998654332 22345789999999999999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948           88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR  166 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~  166 (397)
                      +|||||. |++...+......+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.......
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence            9999998 567777777777899999999999999999999999999999999999999999999999999987644322


Q ss_pred             ---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948          167 ---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL  242 (397)
Q Consensus       167 ---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (397)
                         ......||+.|+|||++.+ ..|+.++|||||||++|||++| .+||.+.+..+.+..+......            
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~-~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~------------  232 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL------------  232 (283)
T ss_dssp             --------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC------------
T ss_pred             cceEeccCCCCccccCHHHHcc-CCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCC------------
Confidence               2233457888999999977 5799999999999999999985 5666666666655554432111            


Q ss_pred             ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                     .....++..+.+||.+||+.||++|||+.|+++
T Consensus       233 ---------------~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         233 ---------------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             ---------------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---------------CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence                           111235789999999999999999999999976

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-54  Score=391.65  Aligned_cols=252  Identities=21%  Similarity=0.306  Sum_probs=200.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-CC--cEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-TG--QTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNL   86 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-~~--~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   86 (397)
                      .++|++.+.||+|+||+||+|+... ++  ..||||++....... .....+.+|+.+|++++|||||++++++.+ ..+
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            4679999999999999999998643 33  368999987654333 233467899999999999999999999965 467


Q ss_pred             EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948           87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD  165 (397)
Q Consensus        87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~  165 (397)
                      ++|||||+ |++.+.+......+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++......
T Consensus        86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~  165 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  165 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence            89999998 68888887777779999999999999999999999999999999999999999999999999999875443


Q ss_pred             C---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948          166 R---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY  241 (397)
Q Consensus       166 ~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (397)
                      .   ......++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+...-..           
T Consensus       166 ~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~-----------  233 (273)
T d1u46a_         166 DHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-----------  233 (273)
T ss_dssp             CEEEC-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCC-----------
T ss_pred             CcceecCccccCcccCCHHHHhC-CCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCC-----------
Confidence            2   2233456778999999987 668999999999999999997 89999999888887776542100           


Q ss_pred             CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                     ....+.+|+++.+||.+||..||++|||++||++
T Consensus       234 ---------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         234 ---------------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             ---------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                           0122356899999999999999999999999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-53  Score=392.28  Aligned_cols=251  Identities=23%  Similarity=0.332  Sum_probs=209.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|++.+.||+|+||+||+|+++     .+++.||||++..... ......+.+|+.+|++++||||+++++++...+.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~   90 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP   90 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC-hHHHHHHHHHHHHHHhcCCCCcccceeeeccCCc
Confidence            578999999999999999999875     3567899999875432 2234467899999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCc
Q 015948           86 LHLVFEFME-TDLETVIRNTN-----------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNN  141 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~-----------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~N  141 (397)
                      +++||||++ |+|.+++....                       ..+++..+..++.||+.||+|||++||+||||||+|
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~N  170 (301)
T d1lufa_          91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN  170 (301)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccc
Confidence            999999998 68888886532                       238899999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcH
Q 015948          142 LLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDI  218 (397)
Q Consensus       142 ILl~~~~~~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~  218 (397)
                      |||+.++.+||+|||+|+......  ...+...+++.|+|||++.+ ..|+.++|||||||++|||++| .+||.+.+..
T Consensus       171 ILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~  249 (301)
T d1lufa_         171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE  249 (301)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             eEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc-CCCChhhhhccchhhHHHHHccCCCCCCCCCHH
Confidence            999999999999999998653332  23345668889999999986 5699999999999999999988 4789988888


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          219 DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       219 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      +.+..+.....                           ......+++++.+||.+||+.||++|||+.||++
T Consensus       250 e~~~~v~~~~~---------------------------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         250 EVIYYVRDGNI---------------------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHHHHHHTTCC---------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCC---------------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            87777654311                           1122356899999999999999999999999965

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-53  Score=390.71  Aligned_cols=253  Identities=24%  Similarity=0.381  Sum_probs=197.1

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec-C
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH-K   83 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~-~   83 (397)
                      .++|++.+.||+|+||+||+|++..     +++.||||++....... ....+.+|+.++.++ .|+||+.+++++.. +
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~   90 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVNLLGACTKPG   90 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHH-HHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcH-HHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence            4789999999999999999998754     44689999987543322 234566788888777 57999999988754 5


Q ss_pred             CeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC
Q 015948           84 GNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH  147 (397)
Q Consensus        84 ~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~  147 (397)
                      ..+|+|||||+ |+|.+++....               ..+++..+..|+.||+.||.|||++||+||||||+||||+.+
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~  170 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK  170 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCC
Confidence            57899999998 68888886532               348999999999999999999999999999999999999999


Q ss_pred             CcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHH
Q 015948          148 GQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKI  224 (397)
Q Consensus       148 ~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i  224 (397)
                      +++||+|||+|+.......  ......||+.|+|||++.+ ..|+.++|||||||++|||++| .+||.+.+..+.+..+
T Consensus       171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~  249 (299)
T d1ywna1         171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  249 (299)
T ss_dssp             GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred             CcEEEccCcchhhccccccccccCceeeCccccchhHhhc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            9999999999987644332  3345678999999999977 6689999999999999999986 5788887665555444


Q ss_pred             HHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          225 FAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                      +......                          .....+++++++||.+||+.||++|||++|+++|
T Consensus       250 ~~~~~~~--------------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         250 LKEGTRM--------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCC--------------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4331110                          1123458999999999999999999999999986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-53  Score=385.68  Aligned_cols=244  Identities=20%  Similarity=0.313  Sum_probs=197.3

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee-cCCeEEEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-HKGNLHLV   89 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-~~~~~~lv   89 (397)
                      .++|++.+.||+|+||+||+|+++  |..||||+++...    ....+.+|+++|++++|||||++++++. .++.+|+|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv   79 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   79 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEE
Confidence            357999999999999999999874  7789999986432    3356889999999999999999999884 45678999


Q ss_pred             EEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948           90 FEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR  167 (397)
Q Consensus        90 ~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~  167 (397)
                      |||++ |+|.+++.+.. ..+++..+..++.||+.||.|||+++|+||||||+|||++.+|.+||+|||+++.....   
T Consensus        80 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~---  156 (262)
T d1byga_          80 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  156 (262)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCC---
Confidence            99998 68888886542 34899999999999999999999999999999999999999999999999999875432   


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....++..|+|||++.+ ..++.++|||||||++|||++ |++||.+.+..+....+.+...                 
T Consensus       157 ~~~~~~~~~y~aPE~l~~-~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~-----------------  218 (262)
T d1byga_         157 QDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-----------------  218 (262)
T ss_dssp             -----CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC-----------------
T ss_pred             CccccccccCCChHHHhC-CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC-----------------
Confidence            234567788999999976 568999999999999999998 7999988877766666533211                 


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                ..+.+.+++++.+||.+||+.||.+|||+.+++++
T Consensus       219 ----------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         219 ----------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                      11223458999999999999999999999999874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-52  Score=387.34  Aligned_cols=263  Identities=18%  Similarity=0.213  Sum_probs=211.8

Q ss_pred             hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCCeE
Q 015948            8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNL   86 (397)
Q Consensus         8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~~   86 (397)
                      -.+.++|++.+.||+|+||+||+|++..+|+.||||++.....    ...+.+|+++++.++|++ |+.+.+++.+++..
T Consensus         3 ~~vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~   78 (299)
T d1ckia_           3 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN   78 (299)
T ss_dssp             CEETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEE
T ss_pred             CeECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEE
Confidence            3567899999999999999999999999999999999875432    235778999999998765 55566677888899


Q ss_pred             EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---CCcEEEeeeccceeeCC
Q 015948           87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGS  163 (397)
Q Consensus        87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~~~~kl~DFG~a~~~~~  163 (397)
                      ++|||||+|++...+......+++..+..++.||+.||+|||++||+||||||+|||++.   +..+||+|||+|+.+..
T Consensus        79 ~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_          79 VMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             EEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             EEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            999999999999988887878999999999999999999999999999999999999864   45799999999998754


Q ss_pred             CC-------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948          164 PD-------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW  236 (397)
Q Consensus       164 ~~-------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  236 (397)
                      ..       ......+||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.........+.....       
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~-------  230 (299)
T d1ckia_         159 ARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE-------  230 (299)
T ss_dssp             TTTCCBCCCCBCCSCCCCSSSCCHHHHTT-BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH-------
T ss_pred             cccccceeccccCCcCCCccccCHHHHhC-CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhc-------
Confidence            32       22345679999999999987 5699999999999999999999999988765544433322100       


Q ss_pred             CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHH---HhcCCCCC
Q 015948          237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ---ALEHRYFS  295 (397)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e---~l~hp~~~  295 (397)
                                   .....+.....+.+|+++.+||.+||+.||++||++++   +|+|+|.+
T Consensus       231 -------------~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         231 -------------KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             -------------HHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             -------------ccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence                         00112233445677999999999999999999999874   56777653

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-52  Score=388.21  Aligned_cols=251  Identities=24%  Similarity=0.376  Sum_probs=204.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCC-------cEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTG-------QTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH   82 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-------~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~   82 (397)
                      .++|++.+.||+|+||.||+|++..++       ..||||+++..... .....+.+|+..+.++ +|||||+++++|.+
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccCh-HHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            589999999999999999999876554       47999998754332 2334577899999888 79999999999999


Q ss_pred             CCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           83 KGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        83 ~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                      ++.+|+|||||. |+|.+++....               ..+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~  170 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  170 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecC
Confidence            999999999998 68888887553               34899999999999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK  223 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~  223 (397)
                      ++.+||+|||+++......  .......+++.|+|||++.+ ..|+.++|||||||++|||++ |.+||.+.+..+....
T Consensus       171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~  249 (299)
T d1fgka_         171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL  249 (299)
T ss_dssp             TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcC-CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHH
Confidence            9999999999998764432  23345667888999999976 579999999999999999997 7999988777665554


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      +......                           .....+++++++||.+||+.||.+|||+.|+++
T Consensus       250 i~~~~~~---------------------------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         250 LKEGHRM---------------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHTTCCC---------------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCC---------------------------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            4332110                           112345899999999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-53  Score=391.02  Aligned_cols=251  Identities=26%  Similarity=0.359  Sum_probs=205.9

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECCCCcE--EEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT--VAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH   87 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~--~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~   87 (397)
                      .++|++.+.||+|+||+||+|+++.+|..  ||||.+...... .....+.+|+++|+++ +|||||+++++|.+++.+|
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   87 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   87 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccCh-HHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence            47899999999999999999999888875  667776543322 3345688999999999 7999999999999999999


Q ss_pred             EEEEccc-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948           88 LVFEFME-TDLETVIRNT---------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK  151 (397)
Q Consensus        88 lv~e~~~-g~L~~~~~~~---------------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k  151 (397)
                      +|||||+ |+|.+++.+.               ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~k  167 (309)
T d1fvra_          88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK  167 (309)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEE
T ss_pred             EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceE
Confidence            9999999 6898888653               34699999999999999999999999999999999999999999999


Q ss_pred             EeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCC
Q 015948          152 LADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGT  230 (397)
Q Consensus       152 l~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~  230 (397)
                      |+|||+|+...... ......||..|+|||.+.+ ..|+.++|||||||++|||++| .+||.+.+..+.+..+..... 
T Consensus       168 l~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~-  244 (309)
T d1fvra_         168 IADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-  244 (309)
T ss_dssp             ECCTTCEESSCEEC-CC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC-
T ss_pred             Eccccccccccccc-cccceecCCcccchHHhcc-CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC-
Confidence            99999998653322 2234567888999999976 5689999999999999999996 578888877776655533210 


Q ss_pred             CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                        +                        .....+++++++||.+||+.||++|||+.||++|
T Consensus       245 --~------------------------~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         245 --L------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             --C------------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --C------------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence              0                        1123458999999999999999999999999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=9.3e-52  Score=381.11  Aligned_cols=254  Identities=20%  Similarity=0.234  Sum_probs=213.3

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLH   87 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~   87 (397)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++.....    ...+.+|+++++.|+| +||+.+++++..+...|
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~   77 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV   77 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence            357899999999999999999999999999999999865432    2357789999999976 89999999999999999


Q ss_pred             EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-----CCcEEEeeeccceeeC
Q 015948           88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-----HGQLKLADFGLARIFG  162 (397)
Q Consensus        88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-----~~~~kl~DFG~a~~~~  162 (397)
                      +|||||+|+|...+...+..+++..+..++.|++.||+|||++||+||||||+||||+.     ++.+||+|||+|+.+.
T Consensus        78 ~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          78 LVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             EEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             EEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence            99999999999999888778999999999999999999999999999999999999974     5789999999999864


Q ss_pred             CCC-------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHHHhCCCC
Q 015948          163 SPD-------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI---DQLGKIFAAFGTAT  232 (397)
Q Consensus       163 ~~~-------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~  232 (397)
                      ...       ......+||+.|||||++.+ ..++.++|||||||++|||++|..||.+....   ....++....    
T Consensus       158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~-~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~----  232 (293)
T d1csna_         158 DPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK----  232 (293)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH----
T ss_pred             cCccccceeecccCceEEchhhcCHHHhcC-CCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhcc----
Confidence            322       23445679999999999987 67999999999999999999999999865433   2233332210    


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                                         ...+.+.+.+.+++++.+++..|+..+|++||+.+.+.+
T Consensus       233 -------------------~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         233 -------------------QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             -------------------HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -------------------CCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence                               111234455667899999999999999999998776543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-51  Score=383.66  Aligned_cols=252  Identities=25%  Similarity=0.329  Sum_probs=211.2

Q ss_pred             hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG   84 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~   84 (397)
                      .++|++.+.||+|+||.||+|++.     .+++.||||+++..... .....+.+|+.+++.+ +|||||++++++.+..
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~  100 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCH-HHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence            589999999999999999999863     46678999999765432 2334578999999999 6999999999999999


Q ss_pred             eEEEEEEccc-cCHHHHHHhcC-----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948           85 NLHLVFEFME-TDLETVIRNTN-----------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS  146 (397)
Q Consensus        85 ~~~lv~e~~~-g~L~~~~~~~~-----------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~  146 (397)
                      .+|+|||||+ |+|..++....                 ..+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus       101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~  180 (311)
T d1t46a_         101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH  180 (311)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred             EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccc
Confidence            9999999998 68888876542                 24899999999999999999999999999999999999999


Q ss_pred             CCcEEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948          147 HGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK  223 (397)
Q Consensus       147 ~~~~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~  223 (397)
                      ++.+||+|||+++......  .......||+.|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+.+
T Consensus       181 ~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~  259 (311)
T d1t46a_         181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK  259 (311)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH
T ss_pred             cCcccccccchheeccCCCcceEeeecccChHHcCHHHhcC-CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            9999999999999765433  23345678999999999976 568999999999999999998 7888888777666666


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                      +...-...                          .....+++++.+||.+||+.||++|||++||++
T Consensus       260 ~i~~~~~~--------------------------~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         260 MIKEGFRM--------------------------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHTCCC--------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCCCC--------------------------CCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            65431110                          111235899999999999999999999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-52  Score=385.53  Aligned_cols=256  Identities=21%  Similarity=0.333  Sum_probs=213.6

Q ss_pred             hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948           11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN   85 (397)
Q Consensus        11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~   85 (397)
                      .++|.+.+.||+|+||+||+|.++.     ++..||||+++.... ......+.+|+.++++++|||||++++++..++.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccC-hHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence            5899999999999999999998753     357899999875432 2233457899999999999999999999999999


Q ss_pred             EEEEEEccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeee
Q 015948           86 LHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF  155 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DF  155 (397)
                      .++|||||. |+|..++....         ..++...+..++.||+.||.|||+++|+||||||+||||+.++++||+||
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DF  177 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF  177 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCT
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeec
Confidence            999999998 68888775431         24788999999999999999999999999999999999999999999999


Q ss_pred             ccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCC
Q 015948          156 GLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTAT  232 (397)
Q Consensus       156 G~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~  232 (397)
                      |+|+.......  ......+|+.|+|||.+.+ ..++.++|||||||++|||++| .+||.+.+..+.+..+.....   
T Consensus       178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~-~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~---  253 (308)
T d1p4oa_         178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL---  253 (308)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC---
T ss_pred             ccceeccCCcceeeccceecccccCCHHHHcc-CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCC---
Confidence            99987644332  2334467899999999976 5689999999999999999997 588998888887777654311   


Q ss_pred             CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc------CCCCC
Q 015948          233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE------HRYFS  295 (397)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~------hp~~~  295 (397)
                                              ....+.+++.+.+||.+||+.||.+|||++++++      +|+|+
T Consensus       254 ------------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~  298 (308)
T d1p4oa_         254 ------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR  298 (308)
T ss_dssp             ------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             ------------------------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCc
Confidence                                    1112345899999999999999999999999987      56664

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-51  Score=378.20  Aligned_cols=246  Identities=22%  Similarity=0.309  Sum_probs=195.7

Q ss_pred             eeeeeecCcEEEEEEEECCCC---cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee-cCCeEEEEEEc
Q 015948           17 REVLGEGTYGVVYKAIDTKTG---QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-HKGNLHLVFEF   92 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-~~~~~~lv~e~   92 (397)
                      .++||+|+||+||+|++..++   ..||||.+.... .......+.+|+++|++++|||||++++++. .++.+++||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            678999999999999986654   368999986432 2223456889999999999999999999875 46789999999


Q ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC----c
Q 015948           93 ME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR----R  167 (397)
Q Consensus        93 ~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~----~  167 (397)
                      |+ |+|.+++......+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.......    .
T Consensus       111 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~  190 (311)
T d1r0pa_         111 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN  190 (311)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred             eecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence            99 578888887777788999999999999999999999999999999999999999999999999987643322    2


Q ss_pred             ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCC-CCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948          168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQ-GSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV  246 (397)
Q Consensus       168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  246 (397)
                      .....||..|+|||.+.+ ..++.++|||||||++|||++|..||. ..+..+....+......                
T Consensus       191 ~~~~~gt~~y~aPE~~~~-~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~----------------  253 (311)
T d1r0pa_         191 KTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL----------------  253 (311)
T ss_dssp             TTCSSCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCC----------------
T ss_pred             cccccccccccChHHHhc-CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence            334567889999999876 568999999999999999999665544 44444444443322100                


Q ss_pred             ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948          247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH  291 (397)
Q Consensus       247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  291 (397)
                                 ...+.+++++.+||.+||+.||++||++.|+++|
T Consensus       254 -----------~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         254 -----------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                       1113457899999999999999999999999987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-50  Score=383.27  Aligned_cols=290  Identities=26%  Similarity=0.437  Sum_probs=212.3

Q ss_pred             cccChhhh-cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-----------CC
Q 015948            4 VDLSKKVA-DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-----------SP   71 (397)
Q Consensus         4 ~~~~~~~~-~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-----------hp   71 (397)
                      +.+++.+. +||+++++||+|+||+||+|+++.+|+.||||++++...   ....+.+|+++++.++           |+
T Consensus         4 ~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~---~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~   80 (362)
T d1q8ya_           4 AFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV---YTEAAEDEIKLLQRVNDADNTKEDSMGAN   80 (362)
T ss_dssp             CCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH---HHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             CCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc---chHHHHHHHHHHHHhcchhhhhhhhcCcC
Confidence            45566665 479999999999999999999999999999999975421   2235678999998885           57


Q ss_pred             CeeEEEeeeec--CCeEEEEEEccc--cCHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEc
Q 015948           72 HIIELIDAFPH--KGNLHLVFEFME--TDLET-VIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIG  145 (397)
Q Consensus        72 ~iv~l~~~~~~--~~~~~lv~e~~~--g~L~~-~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~  145 (397)
                      ||+++++++..  ....+++++++.  ++... ........+++..++.++.||+.||+|||+ +||+||||||+||||+
T Consensus        81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~  160 (362)
T d1q8ya_          81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  160 (362)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             ceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeee
Confidence            89999988754  346666666664  33333 334445669999999999999999999998 8999999999999998


Q ss_pred             cCCc------EEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---
Q 015948          146 SHGQ------LKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---  216 (397)
Q Consensus       146 ~~~~------~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---  216 (397)
                      .++.      ++|+|||.|.....   .....+||+.|+|||++.+ ..|+.++|||||||++++|++|++||...+   
T Consensus       161 ~~~~~~~~~~~kl~dfg~s~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~  236 (362)
T d1q8ya_         161 IVDSPENLIQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHS  236 (362)
T ss_dssp             EEETTTTEEEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             ccCcccccceeeEeeccccccccc---ccccccccccccChhhccc-cCCCccccccchHHHHHHHHHCCCCCCCCcccc
Confidence            7654      99999999987543   3345679999999999986 568999999999999999999999997653   


Q ss_pred             ---cHHHHHHHHHHhCCCCCCCCCCCCCCccccc-------cccccCCC-------ccccCCCCCHHHHHHHHHhcCcCC
Q 015948          217 ---DIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-------YQYVAAPP-------LRSLFPSASDDALDLLSKMFTYDP  279 (397)
Q Consensus       217 ---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-------~~~~~~~~s~~~~~li~~~L~~dP  279 (397)
                         ..+.+..++..++......+...........       .......+       ........+++++|||.+||.+||
T Consensus       237 ~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP  316 (362)
T d1q8ya_         237 YTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDP  316 (362)
T ss_dssp             --CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSST
T ss_pred             ccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCCh
Confidence               3455666667766533221111000000000       00000000       001112346789999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCCCC
Q 015948          280 KARITAQQALEHRYFSSAPLP  300 (397)
Q Consensus       280 ~~R~t~~e~l~hp~~~~~~~~  300 (397)
                      .+|||++|+|+||||++....
T Consensus       317 ~~Rpta~e~L~Hp~f~~~~~~  337 (362)
T d1q8ya_         317 RKRADAGGLVNHPWLKDTLGM  337 (362)
T ss_dssp             TTCBCHHHHHTCGGGTTCTTC
T ss_pred             hHCcCHHHHhcCcccCCCCCc
Confidence            999999999999999965543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-50  Score=371.89  Aligned_cols=255  Identities=23%  Similarity=0.291  Sum_probs=190.2

Q ss_pred             hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----e
Q 015948           10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----N   85 (397)
Q Consensus        10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----~   85 (397)
                      +.++|++.+.||+|+||+||+|++  +|+.||||++.....   .......|+..++.++|||||++++++.+++    .
T Consensus         1 ~~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~---~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~   75 (303)
T d1vjya_           1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch---hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceE
Confidence            467899999999999999999975  688999999864322   1112224555666889999999999986543    6


Q ss_pred             EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh--------CCccccCCCCCcEEEccCCcEEEeeec
Q 015948           86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK--------KWVLHRDMKPNNLLIGSHGQLKLADFG  156 (397)
Q Consensus        86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~--------~~ivHrDlkp~NILl~~~~~~kl~DFG  156 (397)
                      +|+|||||. |+|..++.+..  +++.....++.|++.||.|||+        +||+||||||+||||+.++.+||+|||
T Consensus        76 ~~lv~Ey~~~g~L~~~l~~~~--l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFG  153 (303)
T d1vjya_          76 LWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEecccCCCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecC
Confidence            899999998 68888887653  8999999999999999999996        699999999999999999999999999


Q ss_pred             cceeeCCCCC----cccccccCceeeChhcccCcc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH--------
Q 015948          157 LARIFGSPDR----RFTHQVFARWYRAPELLFGAK-----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDID--------  219 (397)
Q Consensus       157 ~a~~~~~~~~----~~~~~~~t~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--------  219 (397)
                      +++.......    .....+||+.|+|||++.+..     .++.++|||||||+||||++|.+||.......        
T Consensus       154 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~  233 (303)
T d1vjya_         154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             TCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred             ccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccc
Confidence            9988754432    234567899999999986532     25678999999999999999998875432110        


Q ss_pred             ---HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcccc--CCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948          220 ---QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSL--FPSASDDALDLLSKMFTYDPKARITAQQALE  290 (397)
Q Consensus       220 ---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  290 (397)
                         ....+.......                   ...+.+...  .......+.+|+.+||+.||++|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~-------------------~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         234 SDPSVEEMRKVVCEQ-------------------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             SSCCHHHHHHHHTTS-------------------CCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHhcc-------------------ccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence               001111110000                   000111111  1112346889999999999999999999976

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.95  E-value=2.1e-28  Score=210.00  Aligned_cols=165  Identities=16%  Similarity=0.184  Sum_probs=122.3

Q ss_pred             eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC----------------ccchHHHHHHHHHhcCCCCeeEEE
Q 015948           14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----------------VNFTALREIKLLKELKSPHIIELI   77 (397)
Q Consensus        14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~----------------~~~~~~~E~~~l~~l~hp~iv~l~   77 (397)
                      |.+.+.||+|+||+||+|++. +|+.||||+++.......                ....+.+|...+.++.|.+++..+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            568899999999999999985 689999998864321100                011234688899999999999988


Q ss_pred             eeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948           78 DAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL  157 (397)
Q Consensus        78 ~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~  157 (397)
                      ++..    .+++|||++++...       .++...+..++.||+.+|+|||++||+||||||+|||++.++ ++|+|||.
T Consensus        81 ~~~~----~~lvme~~~~~~~~-------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-~~liDFG~  148 (191)
T d1zara2          81 AWEG----NAVLMELIDAKELY-------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQ  148 (191)
T ss_dssp             EEET----TEEEEECCCCEEGG-------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE-EEECCCTT
T ss_pred             EecC----CEEEEEeecccccc-------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC-EEEEECCC
Confidence            7643    27999999974321       155666788999999999999999999999999999998655 99999999


Q ss_pred             ceeeCCCCCcccccccCceeeC------hhcccCccCCCCcchHHHHHHH
Q 015948          158 ARIFGSPDRRFTHQVFARWYRA------PELLFGAKQYGAGVDVWAAGCI  201 (397)
Q Consensus       158 a~~~~~~~~~~~~~~~t~~y~a------PE~l~~~~~~~~~~DiwSlG~i  201 (397)
                      |.....+....        |..      .+.+ . +.|+.++|+||+.--
T Consensus       149 a~~~~~~~~~~--------~l~rd~~~~~~~f-~-r~y~~~~d~~s~~~~  188 (191)
T d1zara2         149 SVEVGEEGWRE--------ILERDVRNIITYF-S-RTYRTEKDINSAIDR  188 (191)
T ss_dssp             CEETTSTTHHH--------HHHHHHHHHHHHH-H-HHHCCCCCHHHHHHH
T ss_pred             cccCCCCCcHH--------HHHHHHHHHHHHH-c-CCCCCcccHHHHHHH
Confidence            98765443211        111      1111 2 468899999997543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.79  E-value=2.2e-08  Score=87.85  Aligned_cols=142  Identities=13%  Similarity=0.153  Sum_probs=92.7

Q ss_pred             hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEE
Q 015948            9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLH   87 (397)
Q Consensus         9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~   87 (397)
                      .+.+.|++.+..+.|+.+.||+..  ..+..+.+|........  ....+.+|..++..+. +--+.+++.+..+++..|
T Consensus        11 ~~~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~--~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_          11 KLIEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HhhhceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCccc--chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            456788888776666667999884  45677888876543322  2335678999988885 333567788888889999


Q ss_pred             EEEEccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH--------------------------------------
Q 015948           88 LVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCH--------------------------------------  128 (397)
Q Consensus        88 lv~e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH--------------------------------------  128 (397)
                      +||++++|. +.......      .....++.++...++.||                                      
T Consensus        87 lv~~~l~G~~~~~~~~~~------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T d1j7la_          87 LLMSEADGVLCSEEYEDE------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEEECCSSEEHHHHTTTC------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGST
T ss_pred             EEEEeccccccccccccc------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccc
Confidence            999999974 33221110      011112222223333333                                      


Q ss_pred             ---------------h------CCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          129 ---------------K------KWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       129 ---------------~------~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                                     +      ..++|+|+.|.|||++.++.+-|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                           1      1379999999999998766667999998864

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.29  E-value=2e-06  Score=79.73  Aligned_cols=77  Identities=14%  Similarity=0.042  Sum_probs=48.5

Q ss_pred             eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-----cCCccchHHHHHHHHHhcC-C--CCeeEEEeeeecCCeEEE
Q 015948           17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-----KEGVNFTALREIKLLKELK-S--PHIIELIDAFPHKGNLHL   88 (397)
Q Consensus        17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~E~~~l~~l~-h--p~iv~l~~~~~~~~~~~l   88 (397)
                      .+.||.|....||++.+..+++.+++|.-.....     ......+...|...|+.+. +  ..+.+++.+.  ....++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence            5678999999999998877788999996543111     1112234567998888773 2  3455565443  344578


Q ss_pred             EEEcccc
Q 015948           89 VFEFMET   95 (397)
Q Consensus        89 v~e~~~g   95 (397)
                      |||++++
T Consensus       109 vmE~L~~  115 (392)
T d2pula1         109 VMEDLSH  115 (392)
T ss_dssp             EECCCTT
T ss_pred             EEeccCC
Confidence            9999985

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.15  E-value=4.6e-06  Score=72.11  Aligned_cols=71  Identities=14%  Similarity=0.079  Sum_probs=49.7

Q ss_pred             eeeecC-cEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCC--CeeEEEeeeecCCeEEEEEEcccc
Q 015948           19 VLGEGT-YGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP--HIIELIDAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        19 ~LG~G~-~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp--~iv~l~~~~~~~~~~~lv~e~~~g   95 (397)
                      .+..|. -+.||+... ..+..+++|.....     ....+.+|...|+.+...  .+.+++.+..+++..++||++++|
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~-----~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCcc-----CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence            344444 368998864 45667888975432     223467899988887543  356677777888899999999986

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.44  E-value=0.0002  Score=65.87  Aligned_cols=72  Identities=13%  Similarity=0.155  Sum_probs=48.8

Q ss_pred             eeeeeeecCcEEEEEEEECC-------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEE
Q 015948           16 KREVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLH   87 (397)
Q Consensus        16 i~~~LG~G~~g~Vy~a~~~~-------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~   87 (397)
                      -++.|+.|-.-.+|++....       .++.|.+++...   ... .....+|..+++.+.-.++ .++++++.+    .
T Consensus        46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~---~~~-~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g  117 (395)
T d1nw1a_          46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN---PET-ESHLVAESVIFTLLSERHLGPKLYGIFSG----G  117 (395)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS---CCC-HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred             EEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC---cch-hhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence            35678889999999997653       345677776542   111 2245579999998854444 477777753    4


Q ss_pred             EEEEcccc
Q 015948           88 LVFEFMET   95 (397)
Q Consensus        88 lv~e~~~g   95 (397)
                      +|+||++|
T Consensus       118 ~I~efi~g  125 (395)
T d1nw1a_         118 RLEEYIPS  125 (395)
T ss_dssp             EEECCCCE
T ss_pred             eEEEEecc
Confidence            78999987

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00046  Score=61.59  Aligned_cols=67  Identities=18%  Similarity=0.196  Sum_probs=43.6

Q ss_pred             cEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe--eEEE-----eeeecCCeEEEEEEcccc
Q 015948           25 YGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI--IELI-----DAFPHKGNLHLVFEFMET   95 (397)
Q Consensus        25 ~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i--v~l~-----~~~~~~~~~~lv~e~~~g   95 (397)
                      --.||++.. .+|..|++|+.+....   ....+..|+..+..|....|  +..+     ..+..++..+.++++++|
T Consensus        35 EN~vy~v~~-~dg~~~VlK~~rp~~~---s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G  108 (325)
T d1zyla1          35 ENRVYQFQD-EDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  108 (325)
T ss_dssp             SSEEEEECC-TTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             cceeEEEEc-CCCCEEEEEEeCCCCC---CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence            358999964 4678899999764422   23356678888888843221  1111     123556788999999986

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.81  E-value=0.0026  Score=56.07  Aligned_cols=31  Identities=26%  Similarity=0.250  Sum_probs=27.7

Q ss_pred             CCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948          130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARI  160 (397)
Q Consensus       130 ~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~  160 (397)
                      .|+||+|+.++||+++.++..-|+||+.+..
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhcccccceeEeccccccc
Confidence            4799999999999999887778999999864