Citrus Sinensis ID: 015961

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
Protein Sequence
MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Secondary Structure (PSIPRED)
cccccccccccHHccccccccccccccEEEEEccccHHHHHHHHHcccccccccccEEEEEcccccccccccccEEEEEcccccHHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHccHHHHHHHHHHccccccccccccccEEEEEEcccccccccHHHHHHcccccccccHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHccccccccccccEEEEEEcccHHHHHHHHHHHcccccccccEEEEEEcccccccccccccEEEEEEcccHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccEEEcccHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEEcccEEEEcccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccHHHHHHHHHHHHccHHHHcccEEccccccEcHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccHHHHHHHHHHcccccccHHHHHcccHHccccccccEEccHHHHHHcccccccccHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MSWWWAGAIGAARKkfeedeparsyQSVALIVGVTGivgnslaeilplpdtpggpwkvygvarrpkpnwnadhlveyvqcdvsdpeetqAKLSQLTDVTHIFYVTWtnrsteaenckingSMFRNVLRAvipnapnlrhVCLQtgtkhylgpfeafgkikpydppftedmprldapnfyytLEDILFEEVEKKEElswsvhrpdtifgfspYSLMNLVGALCVYAAVckhegiplrfpgtkaaWECYSIASDADLIAEHQIWaavdpyakneafncnngdvfKWKHLWKVLAEQFgiedyglseeeeeggggtqRVKLAEFMKGKEGVWEEIVRenqlqptrldevGAWWFVDLVLTGEAKLASMnkskehgfsgfrnsknsfITWIdkvkgfkivp
Flexible Loop (DISEMBL)
mswwwagaIGAArkkfeedepARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAklsqltdvTHIFYVTWtnrsteaenckiNGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDyglseeeeeggggtqrVKLAEFMKGKEGVWEEIVREnqlqptrldeVGAWWFVDLVLTGEAKLASMNkskehgfsgfrnsknsfitwidkvkgfkivp
Low Complexity Region (SEG)
MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFgiedyglseeeeeggggTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Disordered region (IsUnstruct)
**WWWAGAIGAARKKF******RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD****QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY*******************EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKL************GFRNSKNSFITWIDKVKGFKI**
Disordered Region (DISOPRED)
MSWWWAGA*********************LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Disordered Region (DISEMBL)
MSWWWAGAIGAARK*********SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGL***********QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Disordered Region (DISPRO)
*SWWWAGAIGAARKKF*****ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	397	2.2.26 [Sep-21-2011]
Q9STX2	388	3-oxo-Delta(4,5)-steroid	yes	no	0.977	1.0	0.730	1e-177
Q6PQJ9	389	3-oxo-Delta(4,5)-steroid	N/A	no	0.979	1.0	0.717	1e-170
O74913	405	Uncharacterized protein C	yes	no	0.904	0.886	0.262	1e-30

>sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=1

 Score =  620 bits (1600), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/397 (73%), Positives = 335/397 (84%), Gaps = 9/397 (2%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWWAGAIGAA+KK +EDEP++S++SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKLDEDEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P WNADH ++Y+QCDVSD E+T++KLS LTDVTH+FYVTWTNR +E+ENC+ NG
Sbjct: 61  VARRPRPTWNADHPIDYIQCDVSDAEDTRSKLSPLTDVTHVFYVTWTNRESESENCEANG 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
           SM RNVL+A+IP APNLRHVCLQTGTKHYLGPF      + +DPPFTEDMPRL   NFYY
Sbjct: 121 SMLRNVLQAIIPYAPNLRHVCLQTGTKHYLGPFTNVDGPR-HDPPFTEDMPRLQIQNFYY 179

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           T EDILFEE++K E ++WS+HRP+ IFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct: 180 TQEDILFEEIKKIETVTWSIHRPNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGS 239

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           K AWE +  ASDADLIAE QIWAAVDPYAKNEAFNCNN D+FKWKHLWK+LAEQFGIE+Y
Sbjct: 240 KKAWEGFMTASDADLIAEQQIWAAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEY 299

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G  E +  G        L E MKGKE VWEE+V+ENQLQ  +L+EVG WWF D++L  E 
Sbjct: 300 GFEEGKNLG--------LVEMMKGKERVWEEMVKENQLQEKKLEEVGVWWFADVILGVEG 351

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            + SMNKSKE+GF GFRNS NSFI+WIDK K FKIVP
Sbjct: 352 MIDSMNKSKEYGFLGFRNSNNSFISWIDKYKAFKIVP 388

Involved in vascular strand development. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 21-acetyl cortexone, 2-cyclohexenone, but-1-en-3-one, ethyl acrylate, ethylmethacrylate, cortisone and canarigenone as substrates, lower activity with 3-methyl-2-cyclohexenone and 3,5,5-trimethyl-2-cyclohexenone as substrate, and no activity with canarigenin, canarigenin digitoxoside and pregnenolone. May be involved in the formation of 5-beta phytoecdysteroids.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3

>sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1 SV=1

 Score =  596 bits (1537), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 285/397 (71%), Positives = 325/397 (81%), Gaps = 8/397 (2%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWWAGAIGAA+K+ EED+    + SVALIVGVTGI+GNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKRLEEDDAQPKHSSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARR +P W+ D+ + YVQCD+SDP+++QAKLS LTDVTH+FYVTW NRSTE ENC+ N 
Sbjct: 61  VARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANS 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
            MFRNVL AVIPN PNL+H+ LQTG KHY+GPFE++GKI+ +DPP+TED+PRL   NFYY
Sbjct: 121 KMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
            LEDI+ EEVEKKE L+WSVHRP  IFGFSPYS+MNLVG LCVYAA+CKHEG  LRF G 
Sbjct: 181 DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGC 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           KAAW+ YS  SDADLIAEH IWAAVDPYAKNEAFN +NGDVFKWKH WKVLAEQFG+   
Sbjct: 241 KAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV--- 297

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G  E EE        +KL + MKGKE VWEEIVREN L PT+L +VG WWF D++L  E 
Sbjct: 298 GCGEYEE-----GVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNEC 352

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            L SMNKSKEHGF GFRNSKN+FI+WIDK K +KIVP
Sbjct: 353 FLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 389

Involved in cardenolide biosynthesis. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 4-androstene-3,17-dione, cortisol and cortisone as substrates, but not pregnenolone, 21-OH-pregnenolone or isoprogesterone. NADPH could not be replaced by NADH.

Digitalis lanata (taxid: 49450)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

>sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 185/408 (45%), Gaps = 49/408 (12%)

Query: 28  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE 87
           VA++ G TG+ G ++ + L   D       +    +   P     H ++ +     +P++
Sbjct: 7   VAIVTGATGLNGAAIIKRLSEDDNCKTIHCISRSLKDEYPRKIKHHSIDLLN---EEPKD 63

Query: 88  TQAKLSQ--LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAV-IPNAPNLRHVCLQT 144
              K S   +  + + ++  +   + E + C++NG+M RN ++A+ + +   LR V L T
Sbjct: 64  IAKKFSLEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVILTT 123

Query: 145 GTKHYLGPFEAFGKIKPYDPPFTEDMPRL-----DAPNFYYTLEDILFEEVEKKEELSWS 199
           G K Y       G+++    P  E   R+       PNFYY  EDIL +E    ++  ++
Sbjct: 124 GLKFY---GLHLGEVRL---PMIETDIRVPETFSGTPNFYYVQEDIL-KEFSNGKKWDYT 176

Query: 200 VHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 259
           +  P+ I G S  S MN    + +YA VC+    P RFPG +  +  +   S + LIA+ 
Sbjct: 177 IAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIADF 236

Query: 260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE--------DYGLSEE------ 305
           Q+W         E FN  NGD+  W   W  +AE FG+E        D+ LS E      
Sbjct: 237 QLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFGVEVPKNQFATDFTLSTEVTLSTP 296

Query: 306 ------EEEGG-------GGTQRVKLAEFMKGK--EGVWEEIVRENQLQPTRLDEVGAWW 350
                 E+E G           ++ L +++K K  +  W  I    +L    L EVG W 
Sbjct: 297 SPINLYEKELGIKHTPNSKIINQISLQQWVKQKKVQDAWRTIAEREKLNAHAL-EVGTWA 355

Query: 351 FVDLVLTGEAK-LASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
           F D +       ++SM+K+++ G++ + ++ + F    D++K  K +P
Sbjct: 356 FCDFLFGRTYNVISSMSKARKLGYTDYYDTFDGFKETFDELKKQKQIP 403

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	397
255538116	390	conserved hypothetical protein [Ricinus	0.982	1.0	0.790	0.0
356514451	388	PREDICTED: uncharacterized protein C757.	0.977	1.0	0.763	0.0
358348859	390	Progesterone 5-beta-reductase [Medicago	0.982	1.0	0.745	0.0
374085803	389	putative progesterone 5-beta-reductase [	0.979	1.0	0.740	1e-180
358345490	809	Progesterone 5-beta-reductase [Medicago	0.977	0.479	0.744	1e-180
226235456	389	progesterone 5beta reductase-A [Nicotian	0.979	1.0	0.732	1e-178
393757452	389	putative progesterone 5-beta-reductase [	0.979	1.0	0.730	1e-177
225458782	390	PREDICTED: uncharacterized protein C757.	0.982	1.0	0.730	1e-177
226235458	388	progesterone 5beta reductase-B [Nicotian	0.977	1.0	0.735	1e-176
295881582	389	progesterone 5-beta-reductase [Erysimum	0.979	1.0	0.725	1e-176

>gi|255538116|ref|XP_002510123.1| conserved hypothetical protein [Ricinus communis] gi|223550824|gb|EEF52310.1| conserved hypothetical protein [Ricinus communis]

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/397 (79%), Positives = 353/397 (88%), Gaps = 7/397 (1%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWWAGAIGAA+KK EED+  RS+QSVAL++GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKQEEDDAPRSFQSVALVLGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P WNADH VEY+QCD+SD  ETQ+KLSQLTD+THIFYVTWTNR +E ENC+ING
Sbjct: 61  VARRPRPTWNADHPVEYIQCDISDSAETQSKLSQLTDITHIFYVTWTNRQSEDENCEING 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
            MFRNVL+AVIPNAPNLRH+CLQTG KHY+GPFE+ GKI+ +DPPFTED+PRLDAPNFYY
Sbjct: 121 LMFRNVLQAVIPNAPNLRHICLQTGAKHYVGPFESLGKIQTHDPPFTEDLPRLDAPNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           TLEDI+FEEV KKE L+WS+HRPD IFGFSPYSLMN++G LCVYA +CKHEG+PL FPGT
Sbjct: 181 TLEDIMFEEVAKKEGLTWSIHRPDQIFGFSPYSLMNIIGTLCVYATICKHEGLPLLFPGT 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           KAAW CYS+ASDADLIAEHQIWA+VDPYAK+EAFNCNNGDVFKWKH WKVLAEQFGIE+Y
Sbjct: 241 KAAWNCYSVASDADLIAEHQIWASVDPYAKDEAFNCNNGDVFKWKHFWKVLAEQFGIEEY 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G  E       G +R+ L E MKGKE VWEEIV ENQLQPT+LDEV  WWFVDL+L GEA
Sbjct: 301 GFEE-------GEKRLSLVEMMKGKEAVWEEIVSENQLQPTKLDEVAVWWFVDLMLGGEA 353

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            ++SMNKSKEHGF GFRNSKNSF +WIDK+K +KIVP
Sbjct: 354 VISSMNKSKEHGFLGFRNSKNSFASWIDKMKAYKIVP 390

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514451|ref|XP_003525919.1| PREDICTED: uncharacterized protein C757.02c-like [Glycine max]

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/397 (76%), Positives = 342/397 (86%), Gaps = 9/397 (2%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWWAGAIGAA+KKFEE+EP RS+QSV L++GVTGIVGNSLAEILPL DTP GPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKFEEEEPPRSFQSVGLVIGVTGIVGNSLAEILPLADTPAGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P WNADH VEY+QCDVSDP + +AKLS LTDVTH+F+V+WTNRSTEAENC++NG
Sbjct: 61  VARRPRPPWNADHPVEYIQCDVSDPADAEAKLSALTDVTHVFFVSWTNRSTEAENCEVNG 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
           +M +NVLRAVIPNAPNLRHV LQTG KHY+GPFE  GKI+ ++PPF EDMPRLDAPNFYY
Sbjct: 121 AMLQNVLRAVIPNAPNLRHVSLQTGGKHYIGPFEFIGKIESHEPPFAEDMPRLDAPNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           T EDILFEE  KKE L+WSVHRP  IFGFSPYSLMN++G L VYAA+CKHEG+PLRFPGT
Sbjct: 181 TQEDILFEETAKKEGLTWSVHRPQVIFGFSPYSLMNMIGTLSVYAAICKHEGVPLRFPGT 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           + AWE YS ASDADLIAE  IWAAVDPYA+NEAFNC+NGDVF+WKHLWKVLAEQFGIE+Y
Sbjct: 241 RGAWESYSCASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFRWKHLWKVLAEQFGIEEY 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G    EEEG      + L+E MK K  VW+EIV ENQL PT+LDEV  WWFVDL+ +GE 
Sbjct: 301 GF---EEEG------LSLSELMKDKGPVWDEIVSENQLLPTKLDEVADWWFVDLIFSGEG 351

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            L SMNK+KEHGF GFRNSKNSFI+WIDK K +KIVP
Sbjct: 352 MLDSMNKAKEHGFLGFRNSKNSFISWIDKTKAYKIVP 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358348859|ref|XP_003638459.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355504394|gb|AES85597.1| Progesterone 5-beta-reductase [Medicago truncatula]

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/397 (74%), Positives = 340/397 (85%), Gaps = 7/397 (1%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWW+GAIGAA+KKF+EDE   ++QSV LI+GVTGIVGNSLAEILPL DTPGG WKVYG
Sbjct: 1   MSWWWSGAIGAAKKKFDEDEAPPTFQSVGLIIGVTGIVGNSLAEILPLADTPGGRWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P+WNADH +EY+QCD++DP ETQ KLS LTDVTHIFYV+W+NR +EAENC++N 
Sbjct: 61  VARRPRPSWNADHPIEYIQCDITDPNETQTKLSVLTDVTHIFYVSWSNRPSEAENCEVNS 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
           +M RNVL AVIPNAPNLRHV LQTG KHYLGPF+  GKI  ++PPFTED+PRLDAPNFYY
Sbjct: 121 AMLRNVLTAVIPNAPNLRHVSLQTGGKHYLGPFDLIGKINSHEPPFTEDLPRLDAPNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           T EDILFEE +KKE LSWSVHRP  IFGFSPYSLMNLVG LCVYAA+CKHEG+PL+FPGT
Sbjct: 181 TQEDILFEETQKKEGLSWSVHRPQVIFGFSPYSLMNLVGTLCVYAAICKHEGVPLKFPGT 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           K AWE YS+ASDADLIAE  IWAAVDPYAKNEAFNC+NGDVF+WK LWKVLAEQFGIE+Y
Sbjct: 241 KGAWESYSVASDADLIAEQHIWAAVDPYAKNEAFNCSNGDVFRWKQLWKVLAEQFGIEEY 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G  EE         R+KL+E MK K  VW+EIV+ENQL+ T++DEVG WWFVDL+  GE 
Sbjct: 301 GFDEE-------GPRLKLSELMKDKGPVWDEIVKENQLEATKIDEVGEWWFVDLMFGGEG 353

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            + SMNK+KEHGF GFRN+KNS I+WIDK + +KIVP
Sbjct: 354 AVDSMNKAKEHGFVGFRNTKNSLISWIDKTRAYKIVP 390

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374085803|gb|AEY82380.1| putative progesterone 5-beta-reductase [Lunaria annua]

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 294/397 (74%), Positives = 341/397 (85%), Gaps = 8/397 (2%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWW AGAIGAA+KKFEEDEP +SY+SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWGAGAIGAAKKKFEEDEPTQSYESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P+WNADH ++Y+QCDVSD ++ ++KLS LTDVTH+FYVTWTNR +E ++C+ NG
Sbjct: 61  VARRPRPSWNADHPIDYIQCDVSDADDARSKLSPLTDVTHVFYVTWTNRPSEHDSCEANG 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
           SM RNVLRA++PNAPNLRHVCLQTGTKHYLGPF+  GK + +DPPFTEDMPRL   NFYY
Sbjct: 121 SMLRNVLRAIVPNAPNLRHVCLQTGTKHYLGPFDNLGKSQHHDPPFTEDMPRLQIQNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           TLEDILFEE++KKE +SWS+HRP+TIFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct: 181 TLEDILFEEIKKKEGVSWSIHRPNTIFGFSPYSLMNIVGTLCVYAAICKHEGSPLVFPGS 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           K AWE ++ ASDADL+AE QIWAAVDPYAKNEAFNCNN D+FKWKH+WKVLAEQFGIE+Y
Sbjct: 241 KKAWEGFTAASDADLVAEQQIWAAVDPYAKNEAFNCNNADIFKWKHMWKVLAEQFGIEEY 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G  E +  G        L + MKGKE VWEE+V+ENQLQ  RL+EVG WWF D++L GE 
Sbjct: 301 GFEEGKNLG--------LVQMMKGKERVWEEMVKENQLQERRLEEVGVWWFADVILGGEG 352

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            + SMNKSKEHGF GFRNS NSF +W+DK K FKIVP
Sbjct: 353 MIDSMNKSKEHGFLGFRNSNNSFSSWVDKYKAFKIVP 389

Source: Lunaria annua

Species: Lunaria annua

Genus: Lunaria

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345490|ref|XP_003636810.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355502745|gb|AES83948.1| Progesterone 5-beta-reductase [Medicago truncatula]

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 294/395 (74%), Positives = 338/395 (85%), Gaps = 7/395 (1%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWW+GAIGAA+KKF+EDE   ++QSV LI+GVTGIVGNSLAEILPL DTPGG WKVYG
Sbjct: 1   MSWWWSGAIGAAKKKFDEDEAPPTFQSVGLIIGVTGIVGNSLAEILPLADTPGGRWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P+WNADH +EY+QCD++DP ETQ KLS LTDVTHIFYV+W+NR +EAENC++N 
Sbjct: 61  VARRPRPSWNADHPIEYIQCDITDPNETQTKLSVLTDVTHIFYVSWSNRPSEAENCEVNS 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
           +M RNVL AVIPNAPNLRHV LQTG KHYLGPF+  GKI  ++PPFTED+PRLDAPNFYY
Sbjct: 121 AMLRNVLTAVIPNAPNLRHVSLQTGGKHYLGPFDLIGKINSHEPPFTEDLPRLDAPNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           T EDILFEE +KKE LSWSVHRP  IFGFSPYSLMNLVG LCVYAA+CKHEG+PL+FPGT
Sbjct: 181 TQEDILFEETQKKEGLSWSVHRPQVIFGFSPYSLMNLVGTLCVYAAICKHEGVPLKFPGT 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           K AWE YS+ASDADLIAE  IWAAVDPYAKNEAFNC+NGDVF+WK LWKVLAEQFGIE+Y
Sbjct: 241 KGAWESYSVASDADLIAEQHIWAAVDPYAKNEAFNCSNGDVFRWKQLWKVLAEQFGIEEY 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G  EE         R+KL+E MK K  VW+EIV+ENQL+ T++DEVG WWFVDL+  GE 
Sbjct: 301 GFDEE-------GPRLKLSELMKDKGPVWDEIVKENQLEATKIDEVGEWWFVDLMFGGEG 353

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKI 395
            + SMNK+KEHGF GFRN+KNS I+WIDK + +KI
Sbjct: 354 AVDSMNKAKEHGFVGFRNTKNSLISWIDKTRAYKI 388

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226235456|dbj|BAH47640.1| progesterone 5beta reductase-A [Nicotiana tabacum]

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/397 (73%), Positives = 338/397 (85%), Gaps = 8/397 (2%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWWAGAIGAA+KKFEED+    YQSVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKFEEDDAPPKYQSVALIIGVTGIVGNSLAEILPLADTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           +ARRP+P+WNADH ++Y+QCD+S+PE+TQ+KLS LTDVTH+FYVTW +RSTE ENC+ING
Sbjct: 61  LARRPRPSWNADHPIDYIQCDISNPEDTQSKLSLLTDVTHVFYVTWASRSTEVENCEING 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
            MF+NV+  VIPN PNLRH+CLQTG KHYLGPFE +GK+  +D PF ED+PRLDAPNFYY
Sbjct: 121 KMFQNVVSVVIPNCPNLRHICLQTGRKHYLGPFELYGKLVAHDSPFHEDLPRLDAPNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           TLED+LF+EVEKKE L+WSVHRP  IFGFSPYSLMN+VG LCVYAA+CKHEG+PL+FPG 
Sbjct: 181 TLEDVLFKEVEKKEGLTWSVHRPGVIFGFSPYSLMNIVGTLCVYAAICKHEGLPLKFPGV 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           KAAW+ YS  SDADLIAEHQIWAAVDPYAKNEAFN +NGDVFKWKH WKVLAEQFG+E  
Sbjct: 241 KAAWDGYSDCSDADLIAEHQIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVEAA 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
              EE         R  L E MK K  VW+EIV+EN L PT+L++VG WWFVDL+L G+ 
Sbjct: 301 EFDEE--------NRCTLVEMMKDKGPVWDEIVKENGLTPTKLEDVGVWWFVDLMLAGDC 352

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
           +L +MNKSKEHGF GFRNS+ +FI+WIDKVK +K+VP
Sbjct: 353 RLDTMNKSKEHGFLGFRNSQKAFISWIDKVKAYKVVP 389

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|393757452|gb|AFN22088.1| putative progesterone 5-beta-reductase [Draba aizoides]

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/397 (73%), Positives = 340/397 (85%), Gaps = 8/397 (2%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWW AGAIGAA+KKFE+DEP++S++SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWGAGAIGAAKKKFEDDEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P+WNADH ++Y+QCDVSD ++T++KLS LTDVTH+FYVTWT+  +E+ENC+ NG
Sbjct: 61  VARRPRPSWNADHPIDYIQCDVSDADDTKSKLSALTDVTHVFYVTWTSGDSESENCEANG 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
           +M RNVLRAV+PNA NLRHVCLQTGTKHYLGPF+ F     ++PPFTEDMPRL  PNFYY
Sbjct: 121 TMLRNVLRAVVPNAANLRHVCLQTGTKHYLGPFDTFVSGSHHEPPFTEDMPRLQTPNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           TLED+L EE++KKE ++WSVHRP+TIFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct: 181 TLEDVLMEEIKKKEGVTWSVHRPNTIFGFSPYSLMNIVGTLCVYAAICKHEGSPLVFPGS 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           K AWE ++ ASDADL+AE QIWAAVD YAKNEAFNCNN D+FKWKHLWK+LAEQFGIE+Y
Sbjct: 241 KKAWEGFTTASDADLVAEQQIWAAVDSYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEY 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G     EEG    + + L E MKGKE VWEE+V+ENQLQ  +L+EVG WWF D +L  E 
Sbjct: 301 GF----EEG----KNLGLVEMMKGKEKVWEEMVKENQLQERKLEEVGVWWFADFILGVEG 352

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            + SMNKSKEHGF GFRNS NSFI+WIDK K FKIVP
Sbjct: 353 MIDSMNKSKEHGFLGFRNSNNSFISWIDKYKAFKIVP 389

Source: Draba aizoides

Species: Draba aizoides

Genus: Draba

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458782|ref|XP_002285152.1| PREDICTED: uncharacterized protein C757.02c-like [Vitis vinifera]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/397 (73%), Positives = 340/397 (85%), Gaps = 7/397 (1%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWWAGAIGAA+KKF+ED+  R +QSV L++GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKFDEDDAPRGFQSVGLVIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P+WNADH VEY+QCD+SD E+  AKLS LTDVTH+FYVTWTNR+TE ENC+ NG
Sbjct: 61  VARRPRPDWNADHPVEYIQCDISDSEDALAKLSPLTDVTHVFYVTWTNRATEIENCEANG 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
           +M RNVLRA+IPNAPNLRH+CLQTG KHY+GPFEAFGKIKP+DPP+ ED+PRLDAPNFYY
Sbjct: 121 TMLRNVLRALIPNAPNLRHICLQTGGKHYIGPFEAFGKIKPHDPPYHEDLPRLDAPNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           TLEDILFEE EKK++L+WSVHRP  IFGFSPYS+MN++G LC+YAA+CKHEGIPL+FPG+
Sbjct: 181 TLEDILFEECEKKDDLTWSVHRPVIIFGFSPYSMMNILGTLCIYAAICKHEGIPLKFPGS 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           KAAW+CYS ASDADLIAE QIWA VDPYA+NEAFN  NGD+FKWKHLWKVLAEQF +E  
Sbjct: 241 KAAWDCYSDASDADLIAEQQIWATVDPYARNEAFNITNGDLFKWKHLWKVLAEQFDMEYA 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
              E         ++  + E MK K  VWEEIVRE +L PT+L++V  WWF+DLVL GE+
Sbjct: 301 EFEEG-------EEKQSMVEMMKDKGPVWEEIVREKELLPTKLEDVAQWWFIDLVLGGES 353

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            L  MNKSKEHGF GFRNS+NSF+ WIDK++G K++P
Sbjct: 354 LLNCMNKSKEHGFLGFRNSRNSFVWWIDKMRGHKLIP 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226235458|dbj|BAH47641.1| progesterone 5beta reductase-B [Nicotiana tabacum]

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 292/397 (73%), Positives = 336/397 (84%), Gaps = 9/397 (2%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWWWAGAIGAA+KKFEED+    YQSVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKFEEDDAPPKYQSVALIIGVTGIVGNSLAEILPLADTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P+WNADH ++Y+QCD+S+PE+TQ+KLS LTDVTH+FYVTW +RSTE ENC+ING
Sbjct: 61  VARRPRPSWNADHPIDYIQCDISNPEDTQSKLSLLTDVTHVFYVTWASRSTEVENCEING 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
            MF+NVL  +IPN PNLRH+CLQTG KHYLGPFE +GK+  +D PF ED+PRLDAPNFYY
Sbjct: 121 KMFQNVLSVIIPNCPNLRHICLQTGRKHYLGPFELYGKVA-HDFPFHEDLPRLDAPNFYY 179

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           TLED+LF+EVEKKE L+WSVHRP TIFGFSPYSLMN+VG LCVYAA+CKHEG+PL+FPG 
Sbjct: 180 TLEDVLFKEVEKKEGLTWSVHRPGTIFGFSPYSLMNIVGTLCVYAAICKHEGLPLKFPGV 239

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           KAAW+ YS  SDADLIAEHQIWAAVDPYAKNEAFN  NGDVFKWKH WKVLAEQFG+E  
Sbjct: 240 KAAWDGYSDCSDADLIAEHQIWAAVDPYAKNEAFNVRNGDVFKWKHFWKVLAEQFGVEAA 299

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
              E          R  LAE MK K  VW+EIV+EN L P +L++VG WWFVDL+L G+ 
Sbjct: 300 EFDE--------VNRCTLAEMMKDKGPVWDEIVKENGLTPAKLEDVGVWWFVDLILAGDC 351

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            L +MNKSKEHGF GFRNS+ +FI+WIDKVK +K+VP
Sbjct: 352 PLDTMNKSKEHGFLGFRNSQKAFISWIDKVKAYKVVP 388

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295881582|gb|ADG56545.1| progesterone 5-beta-reductase [Erysimum rhaeticum]

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 288/397 (72%), Positives = 335/397 (84%), Gaps = 8/397 (2%)

Query: 1   MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
           MSWW AGAIGAA+KK ++DEP +SY+SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWGAGAIGAAKKKLDDDEPTQSYESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 61  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
           VARRP+P+WNADH ++Y+QCDVS+ E+ ++KLS LTDVTH+FYVTWTNR +E+ENC+ NG
Sbjct: 61  VARRPRPSWNADHPIDYIQCDVSNAEDARSKLSPLTDVTHVFYVTWTNRESESENCEANG 120

Query: 121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
           SM RNVL+A++P+APNLRH+CLQTGTKHY+GPF   G    +DPPFTEDMPRL   NFYY
Sbjct: 121 SMIRNVLQAIVPHAPNLRHICLQTGTKHYVGPFSNLGGGPRHDPPFTEDMPRLQIQNFYY 180

Query: 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
           T ED LFEE++KKE ++WS+HRP+TIFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct: 181 TQEDTLFEEIKKKESVTWSIHRPNTIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGS 240

Query: 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           K AWE ++ ASDADLIAE QIWAAVDPYAKNEAFNCNN D+FKWKHLWK+LAEQFGIE Y
Sbjct: 241 KKAWEGFTTASDADLIAEQQIWAAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEQY 300

Query: 301 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
           G  E +  G        L E MKGKE VWEE+V+ENQLQ  +LDEVG WWF D++L  E 
Sbjct: 301 GFEEGKNLG--------LVEMMKGKERVWEEMVKENQLQEKKLDEVGVWWFADVILGVEG 352

Query: 361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
            + SMNKSKEHGF GFRNS NSFI+WIDK K FKIVP
Sbjct: 353 MIDSMNKSKEHGFLGFRNSNNSFISWIDKYKAFKIVP 389

Source: Erysimum rhaeticum

Species: Erysimum rhaeticum

Genus: Erysimum

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	397
TAIR|locus:2135932	388	VEP1 "VEIN PATTERNING 1" [Arab	0.977	1.0	0.712	1.9e-161
UNIPROTKB|Q48IK0	353	PSPPH_2587 "Aldo-keto reductas	0.876	0.985	0.378	2.3e-62
UNIPROTKB|Q882D3	353	PSPTO_2695 "Uncharacterized pr	0.876	0.985	0.378	3.8e-62
TAIR|locus:2178793	386	AT5G58750 [Arabidopsis thalian	0.904	0.930	0.349	2e-56
UNIPROTKB|Q4K649	386	PFL_5207 "Uncharacterized prot	0.871	0.896	0.318	1.7e-43
ASPGD|ASPL0000051603	376	AN9028 [Emericella nidulans (t	0.889	0.938	0.311	2.6e-38
POMBASE|SPCC757.02c	405	SPCC757.02c "epimarase (predic	0.647	0.634	0.281	6.2e-33
ASPGD|ASPL0000017248	424	AN4177 [Emericella nidulans (t	0.644	0.603	0.293	3.8e-28
ASPGD|ASPL0000040978	437	AN2921 [Emericella nidulans (t	0.644	0.585	0.305	9.8e-23

TAIR|locus:2135932 VEP1 "VEIN PATTERNING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1572 (558.4 bits), Expect = 1.9e-161, P = 1.9e-161
 Identities = 283/397 (71%), Positives = 328/397 (82%)

Query:     1 MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 60
             MSWWWAGAIGAA+KK +EDEP++S++SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct:     1 MSWWWAGAIGAAKKKLDEDEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query:    61 VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 120
             VARRP+P WNADH ++Y+QCDVSD E+T++KLS LTDVTH+FYVTWTNR +E+ENC+ NG
Sbjct:    61 VARRPRPTWNADHPIDYIQCDVSDAEDTRSKLSPLTDVTHVFYVTWTNRESESENCEANG 120

Query:   121 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180
             SM RNVL+A+IP APNLRHVCLQTGTKHYLGPF      + +DPPFTEDMPRL   NFYY
Sbjct:   121 SMLRNVLQAIIPYAPNLRHVCLQTGTKHYLGPFTNVDGPR-HDPPFTEDMPRLQIQNFYY 179

Query:   181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240
             T EDILFEE++K E ++WS+HRP+ IFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct:   180 TQEDILFEEIKKIETVTWSIHRPNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGS 239

Query:   241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXX 300
             K AWE +  ASDADLIAE QIWAAVDPYAKNEAFNCNN D+FKWKHLWK+LAEQF     
Sbjct:   240 KKAWEGFMTASDADLIAEQQIWAAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEY 299

Query:   301 XXXXXXXXXXXXTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 360
                          + + L E MKGKE VWEE+V+ENQLQ  +L+EVG WWF D++L  E 
Sbjct:   300 GFEEG--------KNLGLVEMMKGKERVWEEMVKENQLQEKKLEEVGVWWFADVILGVEG 351

Query:   361 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397
              + SMNKSKE+GF GFRNS NSFI+WIDK K FKIVP
Sbjct:   352 MIDSMNKSKEYGFLGFRNSNNSFISWIDKYKAFKIVP 388

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0035671 "enone reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|Q48IK0 PSPPH_2587 "Aldo-keto reductase family protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 140/370 (37%), Positives = 212/370 (57%)

Query:    29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 88
             AL+VG +GIVG+++ ++L   D     W+V  ++R P    +A   V  V  D+ +P+  
Sbjct:     5 ALVVGASGIVGSAITQLLLEND-----WQVAALSRSP----SARPGVIPVAADLQNPKSV 55

Query:    89 QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH 148
              A L+ L   TH+F  TW+ ++TEAEN ++N +M RNVL AV P A +++HV L TG KH
Sbjct:    56 SAALADLKP-THVFITTWSRQATEAENIRVNAAMVRNVLDAVRP-AGSVKHVALVTGLKH 113

Query:   149 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 208
             YLGPFEA+GK      PF E   RLD  NFYY  ED +F   EK +  +WSVHRP T+ G
Sbjct:   114 YLGPFEAYGKGTLPQTPFRETQARLDIENFYYAQEDEVFAAAEK-DGFTWSVHRPHTVTG 172

Query:   209 FSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY 268
              +  + MN+   L VYA++CK  G P  FPG++  W+  +  +DA  +A  Q+WAA  P 
Sbjct:   173 VAVGNAMNMATTLAVYASICKATGRPFVFPGSRVQWDSLTDMTDARQLAHQQLWAATTPA 232

Query:   269 AKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQRVKLAEFMKGKEGV 328
             A N+AFN  NGDVF+W  +W  +AE F                 ++   L   M   +  
Sbjct:   233 AANQAFNITNGDVFRWSWMWGQIAEYFDLQPADFP---------SEPAPLETQMADDQAA 283

Query:   329 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLAS-MNKSKEHGFSGFRNSKNSFITWI 387
             W +IVRE+QL+   ++ + + W  D  L    ++ + M+KS++ GF+ F+ S ++F    
Sbjct:   284 WTDIVREHQLKEGDINRLISPWHTDADLGRPIEVVTDMSKSRKLGFTAFQASDDAFFEVF 343

Query:   388 DKVKGFKIVP 397
             +K++  +++P
Sbjct:   344 EKLRRDRLIP 353

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q882D3 PSPTO_2695 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 140/370 (37%), Positives = 208/370 (56%)

Query:    29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 88
             AL+VG +GIVG+++ ++L   D     W+V  ++R P         V  V  D+ DP   
Sbjct:     5 ALVVGASGIVGSAITQLLLEND-----WQVAALSRSPSTRPG----VIPVAADLQDPASV 55

Query:    89 QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH 148
              A L+ L   THIF  TW+ ++TEAEN ++N +M RNVL AV P A +++HV L TG KH
Sbjct:    56 TAALADLRP-THIFITTWSRQATEAENIRVNAAMVRNVLDAVRP-AGSVKHVALVTGLKH 113

Query:   149 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 208
             YLGPFEA+GK      PF E  PRLD  NFYY  ED +F   EK +  +WSVHRP T+ G
Sbjct:   114 YLGPFEAYGKGTLPQTPFRESQPRLDIENFYYAQEDEVFAAAEK-DRFTWSVHRPHTVTG 172

Query:   209 FSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY 268
              +  + MN+   L VYA++CK  G P  FPG++  W+  +  +DA  +A  Q+WAA  P 
Sbjct:   173 VAVGNAMNMATTLAVYASICKATGRPFVFPGSRVQWDSLTDMTDARQLAHQQLWAATTPA 232

Query:   269 AKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQRVKLAEFMKGKEGV 328
             A N+AFN  NGDVF+W  +W  +A  F                 +Q   L   M   +  
Sbjct:   233 AANQAFNITNGDVFRWSWMWGQIAGYFGLEPADFP---------SQPALLETQMADDQTA 283

Query:   329 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLAS-MNKSKEHGFSGFRNSKNSFITWI 387
             W  I +E+QL+ + ++ + + W  D  L    ++ + M+KS++ GF+ F+ S ++F    
Sbjct:   284 WTRIAQEHQLKESDINRLISPWHTDADLGRPIEVVTDMSKSRKLGFTAFQASDDAFFEVF 343

Query:   388 DKVKGFKIVP 397
             +K++  +++P
Sbjct:   344 EKLRRDRLIP 353

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2178793 AT5G58750 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 134/383 (34%), Positives = 209/383 (54%)

Query:    26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP 85
             ++VALI GVTG+VG  + + L L   PG  W++YGVAR P+ N +   +  ++ CD+ + 
Sbjct:    16 ENVALIFGVTGLVGREIVKTL-LMSKPG--WRIYGVARNPEIN-SMTKMYNFISCDLLNA 71

Query:    86 EETQAKLSQLTD-VTHIFYVTWTNR-STEAENCKI-NGSMFRNVLRAVIPNAPNLRHVCL 142
              ET+ +LS L D V+H+F+VTW+     + + C + N +M  N L A++PNA  L+H  L
Sbjct:    72 SETKQRLSPLQDIVSHVFWVTWSGEFPLDTDECCVQNKTMLMNALDAILPNAKRLKHFSL 131

Query:   143 QTGTKHYLGPFE---AFGKIKPYDPPFTEDMPRLDA-PNFYYTLEDILFEEVEKKEELSW 198
             QTG KHY+   E   A G+       ++E+ PR  +  NFYY LED+L E++ +   + W
Sbjct:   132 QTGMKHYVSLVEETMARGEGSSLYY-YSEECPRKSSGKNFYYVLEDLLKEKITRSSVV-W 189

Query:   199 SVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE-CYSIASDADLIA 257
             SV RP  + G S  +L N +G+LCVY A+CK+  +P  F GT+  WE  Y   SD++L+A
Sbjct:   190 SVQRPGLLMGSSSRTLYNFMGSLCVYGAMCKYLNLPFVFGGTRECWEESYIDGSDSNLVA 249

Query:   258 EHQIWAAVDPYA--KNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQR 315
             E  I+AA       K EAFN  NG  F WK +W  + ++                   + 
Sbjct:   250 EQHIFAATSGKVREKGEAFNAINGVGFTWKEIWPEIGKKLGVQVNETTMFDEGFWFGREM 309

Query:   316 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKL-ASMNKSKEHGFS 374
             V+       ++ VW+EIV + +L  T ++++  W+F+D +     KL     K    GF 
Sbjct:   310 VE-------RKHVWDEIVVKEKLVRTEIEDLANWYFLDALFRCPFKLLGKREKVDRFGFK 362

Query:   375 GFRNSKNSFITWIDKVKGFKIVP 397
                 + +S + WID ++  K++P
Sbjct:   363 RKYRTLDSVLYWIDVMRDEKLIP 385

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q4K649 PFL_5207 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 118/371 (31%), Positives = 186/371 (50%)

Query:    30 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADH--LVEYVQCDVSDPEE 87
             L++G  G+VG ++ E++    TPG  W++   ARR  P    D      ++  D+ D   
Sbjct:    38 LVIGGYGVVGTAVVELMHR--TPG--WQLTTAARRRPPTSLLDGSPAPAHISADLLDVAG 93

Query:    88 TQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTK 147
             T    + L  VT + +  ++ R + A     N +M  + L+A+      LR V L  G K
Sbjct:    94 TARAFAGLGSVTDLVFCAYSERESMAATVAPNLAMLEHSLKALRQAGARLRQVVLIGGGK 153

Query:   148 HYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIF 207
              Y G  E  G    Y  P  E  PR   P FY   ED+L+ E E+ E  +W+V RPD + 
Sbjct:   154 SY-G--EHLGS---YKTPAKESDPRFMGPIFYNDQEDLLWHEAER-EGFAWTVLRPDGVM 206

Query:   208 GFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP 267
             G S  S MN++  +  +AA+ +   +PLRFPG+  AW     A+D+ ++A+  +WA   P
Sbjct:   207 GPSLNSPMNILTGIASFAAISQALNLPLRFPGSLQAWSALHQATDSRVLAQAVLWALTSP 266

Query:   268 YAKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQRVKLAEFMKGKEG 327
              A+ + FN  NGD F+W+HLW  +A  F                  Q + L   M  K  
Sbjct:   267 NAQQQVFNVTNGDHFRWQHLWPQIAGFFGLASAA-----------PQPMNLGVQMADKAP 315

Query:   328 VWEEIVRENQLQPTRLDEVGAWWFVDLVL-TGEAKLASMNKSKEHGFSGFRNSKNSFITW 386
             +W  IV+E QL+PT  +++ AW FVD  L TG   + S  K ++ GF+G  +S  S +  
Sbjct:   316 LWARIVQEQQLRPTPWEQIAAWPFVDGWLNTGYDMVQSTIKIRQAGFTGCIDSHQSVLEQ 375

Query:   387 IDKVKGFKIVP 397
             + +++ ++++P
Sbjct:   376 LQRLRDYRLIP 386

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000051603 AN9028 [Emericella nidulans (taxid:162425)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 118/379 (31%), Positives = 183/379 (48%)

Query:    29 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEE 87
             ALI G  GI G+++ E L + +T    W ++   +R P      D  VE++  D S+P E
Sbjct:     5 ALITGANGITGSAILEYL-VKNTTASEWERIIITSRSPLKTAVNDSRVEFIALDFSNPPE 63

Query:    88 TQAKL--SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145
               A    SQ  DVTH ++ ++ ++   AE  + N S+F N L A++  A  L++  LQTG
Sbjct:    64 KLADQMRSQCADVTHAYFSSYVHKDDFAELNEANRSLFENFLNALVDVAKGLQNCTLQTG 123

Query:   146 TKHYLGPFEAFGKIKPYDPPFTEDMPRL--DAPNFYYTLEDILFEEVEKKEELSWSVHRP 203
              K+Y         ++P   P  E  PRL     NFYY  ED L E+ ++    +W+V RP
Sbjct:   124 GKYYNV------HVRPVPWPAHEGHPRLVRAEENFYYHQEDFLAEK-QRGSNWTWNVIRP 176

Query:   204 DTIFGFSPY-SLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW 262
             + I G++   + MN    + +Y  + K  G+    P   A +      SDA LIA+  I+
Sbjct:   177 EAIIGYTTKPNGMNEALTIALYFLINKELGVEAPMPTNAAYFNGVDDVSDARLIADLTIY 236

Query:   263 AAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQR---VKLA 319
             A+      NEAFN  NGDVF W+++W  LA+ F                  +    + L 
Sbjct:   237 ASTHKNCANEAFNVTNGDVFSWRYMWPRLADWFGAKASSNQSFNRTSFKEGETHLDLNLE 296

Query:   320 EFMKGKEGVWEEIVRE--NQLQPTRLDEVGAWWFVDLVL--TGEAKLASMNKSKEHGFSG 375
             ++ + K  VW  +  +  + L     D  G W F D V   T  + L S+NK+++ G++G
Sbjct:   297 QWAQDKREVWNRLCDKAGSPLSKASFD-AGTWTFQDWVFQRTWSSPL-SINKARKFGWTG 354

Query:   376 FRNSKNSFITWIDKVKGFK 394
               +S +SF+   D  K FK
Sbjct:   355 HLDSFDSFV---DAFKRFK 370

GO:0008150 "biological_process" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

POMBASE|SPCC757.02c SPCC757.02c "epimarase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 287 (106.1 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
 Identities = 78/277 (28%), Positives = 134/277 (48%)

Query:    28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDV--SDP 85
             VA++ G TG+ G ++ + L   D       ++ ++R  K  +     +++   D+   +P
Sbjct:     7 VAIVTGATGLNGAAIIKRLSEDDNCK---TIHCISRSLKDEY--PRKIKHHSIDLLNEEP 61

Query:    86 EETQAKLSQ--LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAV-IPNAPNLRHVCL 142
             ++   K S   +  + + ++  +   + E + C++NG+M RN ++A+ + +   LR V L
Sbjct:    62 KDIAKKFSLEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVIL 121

Query:   143 QTGTKHYLGPFEAFGKIKPYDPPFTEDM--PRL--DAPNFYYTLEDILFEEVEKKEELSW 198
              TG K Y G     G+++   P    D+  P      PNFYY  EDIL +E    ++  +
Sbjct:   122 TTGLKFY-GLH--LGEVRL--PMIETDIRVPETFSGTPNFYYVQEDIL-KEFSNGKKWDY 175

Query:   199 SVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE 258
             ++  P+ I G S  S MN    + +YA VC+    P RFPG +  +  +   S + LIA+
Sbjct:   176 TIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIAD 235

Query:   259 HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF 295
              Q+W         E FN  NGD+  W   W  +AE F
Sbjct:   236 FQLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYF 272

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000017248 AN4177 [Emericella nidulans (taxid:162425)]

 Score = 282 (104.3 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
 Identities = 82/279 (29%), Positives = 127/279 (45%)

Query:    29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 88
             A++ G TGI G+++   L          K+Y ++R   P +  D  +++   D+    + 
Sbjct:     4 AIVTGATGITGSAIVHHL---QKDASYKKIYALSRSD-PGYK-DPKLQHAAIDLQGSADD 58

Query:    89 QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP--NLRHVCLQTGT 146
              AK        ++++  +      AE C+ING+M  N ++A+        L+   L  G 
Sbjct:    59 MAKTLSGISAEYVYFCAYMAHDDPAELCRINGTMISNFIQALEKTGAISKLKRFILTCGF 118

Query:   147 KHYLGPFEAFGKIKPYDPPFTEDMPRLDA--------PNFYYTLEDILFEEVEKKE-ELS 197
             K Y       G  K    PF E+ P L+         PNFY+T + IL E   + E +  
Sbjct:   119 KQYS---VHLGNAKQ---PFHEEDPVLEGEVGGETWPPNFYFTQQRILAEAAARSEGQWD 172

Query:   198 WSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH-EGIPLRFPGTKAAWECYSIASDADLI 256
             W V  P  + GF+  + MN   A+ +Y  V K   G  L FPG KA +  ++  + A+L 
Sbjct:   173 WVVTLPQDVLGFARGNFMNEATAVGLYCTVSKVLPGSELPFPGCKAGYFAFNTWTSANLH 232

Query:   257 AEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF 295
             A+  +WAA    A N  FN  NGD   W+ LW  LA +F
Sbjct:   233 AKFCLWAATAKGAGNNIFNVINGDTESWQDLWPRLARRF 271

GO:0003824 "catalytic activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

ASPGD|ASPL0000040978 AN2921 [Emericella nidulans (taxid:162425)]

 Score = 256 (95.2 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
 Identities = 88/288 (30%), Positives = 132/288 (45%)

Query:    29 ALIVGVTGIVGNSLAEILPL-PDTPGGPW-KVYGVARRPKP-NWNAD-----HLVEYVQC 80
             A++ G  G+ G ++  +L   P+     W K+Y ++RR  P N+  D       VE++  
Sbjct:    30 AVVTGANGLSGYNMVRVLSAAPER----WSKIYCLSRRAAPSNFFTDLGDGAARVEHIPV 85

Query:    81 D-VSDPEETQAKLSQ-LTDVTHIFYVTWTNRSTE---------AENC-KINGSMFRNVLR 128
             D +S+  E  ++L + +  V ++F+ ++     E         AE   K+N +M  N L 
Sbjct:    86 DFLSETAEIASRLREDIPKVDYVFFFSYMQPEQEGNVLGMWSDAEALTKVNSTMLNNFLG 145

Query:   129 AVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP-NFYYTLEDILF 187
             A+     + +   +QTG KHY      F  I P   P  E   R+    NFYY  ED L 
Sbjct:   146 ALQEANLHPKRFLIQTGAKHY-----GF-HIGPSTNPSFETDRRVSLEQNFYYLQEDALA 199

Query:   188 EEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY 247
                     + W+V RP  I G      +N +  L +YAA+  H   PL FPG   AW+  
Sbjct:   200 AYCAGTG-VGWNVVRPSYIIGAVRDGALNHMIGLAIYAAIQAHLNQPLYFPGDYIAWDRE 258

Query:   248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF 295
                S A L A  + WA + P A+N+AFN  +G  F W   W  LAE +
Sbjct:   259 VCQSTALLNAYFEEWAVLTPDAENQAFNIQDGLPFTWGRFWPNLAEWY 306

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6PQJ9	5BPOR_DIGLA	1, ., 3, ., 1, ., 3	0.7178	0.9798	1.0	N/A	no
Q9STX2	VEP1_ARATH	1, ., 3, ., 1, ., 3	0.7304	0.9773	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	397
cd08948	308	cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta	1e-142
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	6e-18
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-08
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-05
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	9e-04

>gnl|CDD|187652 cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs

 Score =  407 bits (1047), Expect = e-142
 Identities = 154/313 (49%), Positives = 190/313 (60%), Gaps = 10/313 (3%)

Query: 28  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE 87
           VAL+VG TGI G +L E L     PG  WKVYG++RRP P  +   LVE++  D+ DP +
Sbjct: 1   VALVVGATGISGWALVEHLL--SDPGTWWKVYGLSRRPLPTEDDPRLVEHIGIDLLDPAD 58

Query: 88  T--QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145
           T  +AKL  L DVTH+FY  +  R  EAE  ++NG+M RN L A+ P +PNL+HV LQTG
Sbjct: 59  TVLRAKLPGLEDVTHVFYAAYIERPDEAELVEVNGAMLRNFLDALEPASPNLKHVVLQTG 118

Query: 146 TKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDT 205
           TKHY      F   +P + P  ED PRL  PNFYY  ED+LFE  + K   +WSV RPD 
Sbjct: 119 TKHYGVHLGPFKTPRP-EEPAREDPPRLLPPNFYYDQEDLLFEAAKGKGW-TWSVLRPDA 176

Query: 206 IFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 265
           I GF+P + MNL   L VYAA+C+  G PLRFPG+ AAW   S A+DA L+A   IWAA 
Sbjct: 177 IIGFAPGNAMNLALTLAVYAAICRELGAPLRFPGSPAAWNALSDATDARLLARFTIWAAT 236

Query: 266 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 325
            P A NEAFN  NGDVF+WK LW  LAE FG+E  G   E E   G  +     E M   
Sbjct: 237 HPEAANEAFNVTNGDVFRWKELWPRLAEYFGLE--GAPPEPEAEAGADKAPVWEELMADH 294

Query: 326 E--GVWEEIVREN 336
                W+E+V  +
Sbjct: 295 GLQAAWDELVERH 307

5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 80.5 bits (199), Expect = 6e-18
 Identities = 45/247 (18%), Positives = 69/247 (27%), Gaps = 72/247 (29%)

Query: 29  ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 88
            LI+G TG +G +LA  L          +V  + R  K         E V     D  + 
Sbjct: 1   ILILGATGFIGRALARELLEQG-----HEVTLLVRNTKRLSK--EDQEPVAVVEGDLRDL 53

Query: 89  QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH 148
            +    +  V  + ++    R T    C+++    RNVL A       ++H    +    
Sbjct: 54  DSLSDAVQGVDVVIHLAGAPRDTRD-FCEVDVEGTRNVLEAAKEAG--VKHFIFISSLGA 110

Query: 149 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 208
           Y    E   +  P  P                  E +L E         +++ RP  I+G
Sbjct: 111 YGDLHEE-TEPSPSSPYL----------AVKAKTEAVLREASLP-----YTIVRPGVIYG 154

Query: 209 FSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY 268
                                                          +A     A V P 
Sbjct: 155 ----------------------------------------------DLARAIANAVVTPG 168

Query: 269 AKNEAFN 275
            KNE FN
Sbjct: 169 KKNETFN 175

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 54.6 bits (131), Expect = 3e-08
 Identities = 58/293 (19%), Positives = 94/293 (32%), Gaps = 35/293 (11%)

Query: 30  LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ 89
           L+ G  G +G+ L E L L         V G+ R           VE+V  D++D +   
Sbjct: 4   LVTGGAGFIGSHLVERL-LAAG----HDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVD 58

Query: 90  AKLSQLTD-VTH---IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145
                + D V H      V  +N S  AE   +N     N+L A               G
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEA-----------ARAAG 107

Query: 146 TKH--YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY-YT--LEDILFEEVEKKEELSWSV 200
            K   +           P   P  ED+      N Y  +    + L     +   L   +
Sbjct: 108 VKRFVFASSVSVVY-GDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVI 166

Query: 201 HRPDTIFG-FSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 259
            RP  ++G      L + V +  +   +     I +   G++     Y    D    A+ 
Sbjct: 167 LRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVY--VDDV---ADA 221

Query: 260 QIWAAVDPYAKNEAFNCNNGDV-FKWKHLWKVLAEQFGIEDYGLSEEEEEGGG 311
            + A  +P      FN  +G      + L + +AE  G +   +        G
Sbjct: 222 LLLALENP--DGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRG 272

Length = 314

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 26/150 (17%)

Query: 29  ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 88
            L+ G TG +G+ L   L         ++V  + RR +        + + + D++DP+  
Sbjct: 1   ILVTGGTGFIGSHLVRRLL-----QEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDAL 55

Query: 89  QAKLSQLTDVTHIFYV-----TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQ 143
             +L        + ++        +    A+  + N      +L A             +
Sbjct: 56  -ERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEA-----------ARR 103

Query: 144 TGTK--HYLGPFEAFGKIKPYDPPFTEDMP 171
            G K   +    E +G     DPP TED P
Sbjct: 104 AGVKRFVFASSSEVYG--DVADPPITEDTP 131

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 40.5 bits (95), Expect = 9e-04
 Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 30/191 (15%)

Query: 29  ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADH-LVEYVQCDVSDPE 86
            L+ G +G  G  L + L      GG + + + +A   +      H  +E+++ D++D  
Sbjct: 2   VLVTGGSGFFGERLVKQL---LERGGTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRN 58

Query: 87  ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAV-IPNAPNLRHVCLQTG 145
           + +  LS    V H   +             +  +  R++   V +    N+   C + G
Sbjct: 59  DVEQALSGADCVFHTAAI-------------VPLAGPRDLYWEVNVGGTQNVLDACQRCG 105

Query: 146 TKH--YLGPFEAFGKIKPYDPPFT--EDMPRLDAPNFYYTLEDILFEEVEKK----EELS 197
            +   Y                    E +P     +  Y     + E +  +    ++L 
Sbjct: 106 VQKFVYTSSSSVIF---GGQNIHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLL 162

Query: 198 WSVHRPDTIFG 208
               RP  IFG
Sbjct: 163 TCALRPAGIFG 173

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	397
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.98
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.98
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.98
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.98
PLN00016	378	RNA-binding protein; Provisional	99.97
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.97
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.97
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.96
PLN02686	367	cinnamoyl-CoA reductase	99.96
CHL00194	317	ycf39 Ycf39; Provisional	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
PRK05865	854	hypothetical protein; Provisional	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.95
PLN02583	297	cinnamoyl-CoA reductase	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.94
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.94
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.94
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.94
PLN02996	491	fatty acyl-CoA reductase	99.94
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.92
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.92
PLN02778	298	3,5-epimerase/4-reductase	99.92
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.91
PLN02503	605	fatty acyl-CoA reductase 2	99.9
PRK12320	699	hypothetical protein; Provisional	99.87
PLN02260	668	probable rhamnose biosynthetic enzyme	99.87
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.86
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.86
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.86
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.84
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.83
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.82
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.8
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.76
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.75
PLN03209	576	translocon at the inner envelope of chloroplast su	99.74
PRK06482	276	short chain dehydrogenase; Provisional	99.73
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.73
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.71
PRK09135	249	pteridine reductase; Provisional	99.7
PRK07806	248	short chain dehydrogenase; Provisional	99.65
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.64
PRK08263	275	short chain dehydrogenase; Provisional	99.63
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.62
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.61
PRK05875	276	short chain dehydrogenase; Provisional	99.6
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.59
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.58
PRK07074	257	short chain dehydrogenase; Provisional	99.58
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.58
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.58
PRK06180	277	short chain dehydrogenase; Provisional	99.57
PRK12829	264	short chain dehydrogenase; Provisional	99.57
PRK07774	250	short chain dehydrogenase; Provisional	99.55
PRK12746	254	short chain dehydrogenase; Provisional	99.55
PRK07067	257	sorbitol dehydrogenase; Provisional	99.55
PRK06914	280	short chain dehydrogenase; Provisional	99.54
PRK09134	258	short chain dehydrogenase; Provisional	99.54
PRK07775	274	short chain dehydrogenase; Provisional	99.53
PRK06128	300	oxidoreductase; Provisional	99.52
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.52
PRK12828	239	short chain dehydrogenase; Provisional	99.51
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.5
PRK06179	270	short chain dehydrogenase; Provisional	99.5
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.5
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.49
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.49
PRK06123	248	short chain dehydrogenase; Provisional	99.49
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK12827	249	short chain dehydrogenase; Provisional	99.48
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.48
PRK09186	256	flagellin modification protein A; Provisional	99.48
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.48
PRK06138	252	short chain dehydrogenase; Provisional	99.47
PRK09291	257	short chain dehydrogenase; Provisional	99.46
PRK07577	234	short chain dehydrogenase; Provisional	99.46
PRK07890	258	short chain dehydrogenase; Provisional	99.46
PRK07024	257	short chain dehydrogenase; Provisional	99.45
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.45
PRK05993	277	short chain dehydrogenase; Provisional	99.45
PRK07060	245	short chain dehydrogenase; Provisional	99.44
PRK08219	227	short chain dehydrogenase; Provisional	99.44
COG2910	211	Putative NADH-flavin reductase [General function p	99.43
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.43
PRK06197	306	short chain dehydrogenase; Provisional	99.43
PRK06196	315	oxidoreductase; Provisional	99.43
PRK06194	287	hypothetical protein; Provisional	99.42
PRK06182	273	short chain dehydrogenase; Validated	99.42
PRK08264	238	short chain dehydrogenase; Validated	99.42
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.41
PRK06701	290	short chain dehydrogenase; Provisional	99.41
PLN02253	280	xanthoxin dehydrogenase	99.41
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.4
PRK05876	275	short chain dehydrogenase; Provisional	99.4
PRK06101	240	short chain dehydrogenase; Provisional	99.4
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.4
PRK12743	256	oxidoreductase; Provisional	99.39
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.39
PRK08324	681	short chain dehydrogenase; Validated	99.39
PRK07326	237	short chain dehydrogenase; Provisional	99.38
PRK06523	260	short chain dehydrogenase; Provisional	99.38
PRK05717	255	oxidoreductase; Validated	99.38
PRK06500	249	short chain dehydrogenase; Provisional	99.38
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.38
PRK06398	258	aldose dehydrogenase; Validated	99.37
PRK08267	260	short chain dehydrogenase; Provisional	99.37
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.37
PRK08251	248	short chain dehydrogenase; Provisional	99.37
PRK12937	245	short chain dehydrogenase; Provisional	99.36
PRK12939	250	short chain dehydrogenase; Provisional	99.36
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.36
KOG2774	366	consensus NAD dependent epimerase [General functio	99.36
PRK07102	243	short chain dehydrogenase; Provisional	99.36
PRK07454	241	short chain dehydrogenase; Provisional	99.34
PRK10538	248	malonic semialdehyde reductase; Provisional	99.34
PRK08643	256	acetoin reductase; Validated	99.34
PRK08628	258	short chain dehydrogenase; Provisional	99.34
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.34
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
PRK05854	313	short chain dehydrogenase; Provisional	99.32
PRK12744	257	short chain dehydrogenase; Provisional	99.32
PRK07023	243	short chain dehydrogenase; Provisional	99.32
PRK07985	294	oxidoreductase; Provisional	99.32
PRK07825	273	short chain dehydrogenase; Provisional	99.32
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.31
PRK05866	293	short chain dehydrogenase; Provisional	99.31
PRK05693	274	short chain dehydrogenase; Provisional	99.31
PRK07856	252	short chain dehydrogenase; Provisional	99.31
PRK06181	263	short chain dehydrogenase; Provisional	99.31
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.3
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.3
PRK06057	255	short chain dehydrogenase; Provisional	99.3
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.3
PRK05650	270	short chain dehydrogenase; Provisional	99.3
PRK06953	222	short chain dehydrogenase; Provisional	99.3
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.29
PRK08177	225	short chain dehydrogenase; Provisional	99.29
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.29
PRK12742	237	oxidoreductase; Provisional	99.29
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.29
PRK07904	253	short chain dehydrogenase; Provisional	99.28
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.27
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.27
PRK09242	257	tropinone reductase; Provisional	99.26
PRK06841	255	short chain dehydrogenase; Provisional	99.26
PRK07063	260	short chain dehydrogenase; Provisional	99.26
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.26
PRK08226	263	short chain dehydrogenase; Provisional	99.25
PRK08278	273	short chain dehydrogenase; Provisional	99.25
PRK08017	256	oxidoreductase; Provisional	99.25
PRK07814	263	short chain dehydrogenase; Provisional	99.25
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.24
PRK06949	258	short chain dehydrogenase; Provisional	99.24
PRK08265	261	short chain dehydrogenase; Provisional	99.23
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.23
PRK07478	254	short chain dehydrogenase; Provisional	99.23
PRK08703	239	short chain dehydrogenase; Provisional	99.22
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.22
PRK06114	254	short chain dehydrogenase; Provisional	99.22
PRK06172	253	short chain dehydrogenase; Provisional	99.22
PRK09072	263	short chain dehydrogenase; Provisional	99.22
PRK07576	264	short chain dehydrogenase; Provisional	99.21
PRK07677	252	short chain dehydrogenase; Provisional	99.21
PRK07041	230	short chain dehydrogenase; Provisional	99.21
PRK06198	260	short chain dehydrogenase; Provisional	99.21
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.2
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.2
PRK12747	252	short chain dehydrogenase; Provisional	99.19
PRK07035	252	short chain dehydrogenase; Provisional	99.19
PRK07109	334	short chain dehydrogenase; Provisional	99.19
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.18
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.18
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.18
PRK05867	253	short chain dehydrogenase; Provisional	99.18
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.18
PRK07069	251	short chain dehydrogenase; Validated	99.17
PRK07832	272	short chain dehydrogenase; Provisional	99.17
PRK08589	272	short chain dehydrogenase; Validated	99.16
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.16
PRK06483	236	dihydromonapterin reductase; Provisional	99.16
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.16
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.16
PRK08339	263	short chain dehydrogenase; Provisional	99.15
PRK07062	265	short chain dehydrogenase; Provisional	99.14
PRK06924	251	short chain dehydrogenase; Provisional	99.14
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.14
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.14
PRK05855	582	short chain dehydrogenase; Validated	99.13
PRK06139	330	short chain dehydrogenase; Provisional	99.13
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.12
PRK07201	657	short chain dehydrogenase; Provisional	99.12
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.11
PRK05884	223	short chain dehydrogenase; Provisional	99.11
PRK05872	296	short chain dehydrogenase; Provisional	99.11
PRK06940	275	short chain dehydrogenase; Provisional	99.1
PRK07831	262	short chain dehydrogenase; Provisional	99.1
PRK07578	199	short chain dehydrogenase; Provisional	99.09
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.08
PRK06484	520	short chain dehydrogenase; Validated	99.08
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.07
PRK12367	245	short chain dehydrogenase; Provisional	99.06
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.04
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.03
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.03
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.02
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.02
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.02
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.01
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.97
PLN02780	320	ketoreductase/ oxidoreductase	98.97
PRK08340	259	glucose-1-dehydrogenase; Provisional	98.96
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.94
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	98.92
PRK06125	259	short chain dehydrogenase; Provisional	98.92
PRK06484	520	short chain dehydrogenase; Validated	98.89
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.87
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.85
PRK07791	286	short chain dehydrogenase; Provisional	98.84
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.84
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	98.83
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.81
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	98.8
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.8
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.78
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.76
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	98.75
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.75
PRK08303	305	short chain dehydrogenase; Provisional	98.73
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.73
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.72
PRK08862	227	short chain dehydrogenase; Provisional	98.69
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.68
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.68
PRK05599	246	hypothetical protein; Provisional	98.68
PTZ00325	321	malate dehydrogenase; Provisional	98.64
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.62
KOG1208	314	consensus Dehydrogenases with different specificit	98.61
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	98.61
PRK08309	177	short chain dehydrogenase; Provisional	98.6
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.59
PLN00015	308	protochlorophyllide reductase	98.58
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.53
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.53
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.53
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.5
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.48
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.44
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.43
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.43
PLN00106	323	malate dehydrogenase	98.42
KOG0725	270	consensus Reductases with broad range of substrate	98.38
PRK09620	229	hypothetical protein; Provisional	98.31
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.28
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.27
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.21
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.21
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.2
PRK06720	169	hypothetical protein; Provisional	98.18
COG1028	251	FabG Dehydrogenases with different specificities (	98.18
PRK05086	312	malate dehydrogenase; Provisional	98.06
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.04
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.02
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.97
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.87
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.77
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.71
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	97.7
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.69
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	97.68
PRK14982	340	acyl-ACP reductase; Provisional	97.65
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.62
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.53
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.44
PRK05442	326	malate dehydrogenase; Provisional	97.37
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.37
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.3
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.26
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.19
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.16
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.07
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.04
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.02
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.95
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.9
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.89
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	96.87
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.82
COG3268	382	Uncharacterized conserved protein [Function unknow	96.71
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	96.7
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.57
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.56
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.55
PLN02602	350	lactate dehydrogenase	96.51
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.49
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.46
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.44
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.4
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.38
PRK04148	134	hypothetical protein; Provisional	96.36
PRK09496	453	trkA potassium transporter peripheral membrane com	96.32
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.3
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	96.21
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.16
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.14
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.1
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.1
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.07
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.06
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.05
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.03
PTZ00117	319	malate dehydrogenase; Provisional	95.83
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.67
PRK06223	307	malate dehydrogenase; Reviewed	95.59
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	95.58
KOG1496	332	consensus Malate dehydrogenase [Energy production	95.48
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.45
PRK10669	558	putative cation:proton antiport protein; Provision	95.17
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.1
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.08
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.03
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.02
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	94.93
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.76
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.74
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	94.73
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	94.68
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	94.65
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	94.65
PRK09496	453	trkA potassium transporter peripheral membrane com	94.64
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	94.61
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.52
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.38
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.27
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.17
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	94.16
PLN02383	344	aspartate semialdehyde dehydrogenase	94.1
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.07
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	93.97
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	93.82
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	93.81
PRK10537	393	voltage-gated potassium channel; Provisional	93.64
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	93.54
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.46
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.34
PLN02928	347	oxidoreductase family protein	93.34
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	93.26
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	93.2
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.13
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	93.08
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	93.06
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	92.95
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	92.93
PRK08306	296	dipicolinate synthase subunit A; Reviewed	92.92
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.83
PRK06849	389	hypothetical protein; Provisional	92.81
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	92.67
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	92.66
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	92.58
PLN02948	577	phosphoribosylaminoimidazole carboxylase	92.54
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	92.54
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.47
PRK13243	333	glyoxylate reductase; Reviewed	92.42
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	92.41
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	92.36
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.25
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	92.15
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	92.14
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	92.14
PRK06436	303	glycerate dehydrogenase; Provisional	92.07
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	91.94
PRK07877	722	hypothetical protein; Provisional	91.93
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	91.86
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	91.73
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	91.71
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	91.69
PRK08655	437	prephenate dehydrogenase; Provisional	91.67
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	91.62
PRK07574	385	formate dehydrogenase; Provisional	91.52
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	91.39
PRK06487	317	glycerate dehydrogenase; Provisional	91.3
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	91.29
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	91.25
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	91.08
PRK12480	330	D-lactate dehydrogenase; Provisional	90.99
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	90.91
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.82
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	90.74
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	90.61
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	90.54
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	90.5
KOG4288	283	consensus Predicted oxidoreductase [General functi	90.46
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	90.24
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	90.24
PRK06932	314	glycerate dehydrogenase; Provisional	90.2
PRK06719	157	precorrin-2 dehydrogenase; Validated	90.17
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	90.16
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	89.96
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	89.87
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	89.81
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	89.69
PLN02306	386	hydroxypyruvate reductase	89.52
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	89.48
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	89.48
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	89.46
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	89.44
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	89.44
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	89.37
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	89.29
PRK06444	197	prephenate dehydrogenase; Provisional	89.27
PLN03139	386	formate dehydrogenase; Provisional	89.26
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	89.22
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	89.16
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	89.13
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	89.11
PRK08328	231	hypothetical protein; Provisional	89.1
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	89.01
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	88.97
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	88.9
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	88.88
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	88.88
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	88.85
PLN02735	1102	carbamoyl-phosphate synthase	88.84
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	88.73
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	88.73
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	88.59
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	88.58
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	88.57
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	88.41
PRK08605	332	D-lactate dehydrogenase; Validated	88.32
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	88.28
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	88.18
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	88.09
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	87.96
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.96
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	87.88
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	87.68
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	87.65
PLN02775	286	Probable dihydrodipicolinate reductase	87.62
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	87.57
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	87.55
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	87.44
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	87.35
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	87.33
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	87.32
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	87.21
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	87.17
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	86.9
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	86.82
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.82
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	86.74
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	86.71
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	86.64
PRK08818	370	prephenate dehydrogenase; Provisional	86.64
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	86.57
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	86.51
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	86.38
PRK06545	359	prephenate dehydrogenase; Validated	86.16
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	86.12
PLN00203	519	glutamyl-tRNA reductase	86.07
PRK07417	279	arogenate dehydrogenase; Reviewed	86.07
PLN02712	667	arogenate dehydrogenase	86.03

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.5e-39  Score=280.28  Aligned_cols=306  Identities=16%  Similarity=0.144  Sum_probs=227.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHcc--CCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQ--LTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~   97 (397)
                      +++|||||+||||+++++++++..   ...+|+.++.-.-..       ....+++.++++|+.|.+.+..+++.  .|.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~---~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKH---PDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcC---CCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            479999999999999999999743   224688888743221       23457899999999999999999985  778


Q ss_pred             eeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        98 V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      |+|+|+-+++..+  .|..+.++|+.||.+||+|+++.... .+|+.+|+..+|++-       ...+..++|++|..|.
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l-------~~~~~~FtE~tp~~Ps  149 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDL-------GLDDDAFTETTPYNPS  149 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccc-------cCCCCCcccCCCCCCC
Confidence            9999988776554  78999999999999999999997432 567778776655542       2223468999999998


Q ss_pred             CCcchh--HHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccH
Q 015961          176 PNFYYT--LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDA  253 (397)
Q Consensus       176 ~~~~y~--~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da  253 (397)
                      ++|.-+  ..+++..++.+.+|++++|.|+++-||  |.....-+.++.+   +..-.|+++++.|++.+.++++++.|-
T Consensus       150 SPYSASKAasD~lVray~~TYglp~~ItrcSNNYG--PyqfpEKlIP~~I---~nal~g~~lpvYGdG~~iRDWl~VeDh  224 (340)
T COG1088         150 SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYG--PYQFPEKLIPLMI---INALLGKPLPVYGDGLQIRDWLYVEDH  224 (340)
T ss_pred             CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcC--CCcCchhhhHHHH---HHHHcCCCCceecCCcceeeeEEeHhH
Confidence            884322  244444444488999999999999999  5433322222221   122248899999999999999999886


Q ss_pred             HHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHH
Q 015961          254 DLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIV  333 (397)
Q Consensus       254 ~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (397)
                         |+++ ++....+..|++|||+++...+..|+++.|.+.+|+..+...             ++-.++.+         
T Consensus       225 ---~~ai-~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~-------------~li~~V~D---------  278 (340)
T COG1088         225 ---CRAI-DLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYR-------------DLITFVED---------  278 (340)
T ss_pred             ---HHHH-HHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchh-------------hheEeccC---------
Confidence               5543 344555777999999999999999999999999998643210             11111111         


Q ss_pred             HHhCCCcccccccccchhhhhhhcCc-ccccchhhHH-HcCCCCccCCHHHHHHHHHHHhcCCC
Q 015961          334 RENQLQPTRLDEVGAWWFVDLVLTGE-AKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFKI  395 (397)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~~~~~~~  395 (397)
                             .              -..+ ++.+|.+|++ +|||.|+++.++||+++++||.++.+
T Consensus       279 -------R--------------pGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~  321 (340)
T COG1088         279 -------R--------------PGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEW  321 (340)
T ss_pred             -------C--------------CCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchH
Confidence                   0              0122 6778999975 79999999999999999999988754

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7e-38  Score=274.35  Aligned_cols=296  Identities=17%  Similarity=0.122  Sum_probs=216.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCC--ceEEEccCCCHHHHHHHHcc--CCCeeEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL--VEYVQCDVSDPEETQAKLSQ--LTDVTHIF  102 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~--v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a  102 (397)
                      ++||||||+||||||.+.+|++     .|++|+++++-..........  ++++++|+.|.+.|.+.|+.  ++.|+|+|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~-----~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLK-----TGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHH-----CCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            4799999999999999999999     899999999855432111122  68999999999999999976  55699999


Q ss_pred             EecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961          103 YVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  180 (397)
Q Consensus       103 ~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y  180 (397)
                      +...+..+  +|.++++.|+.||.+|+++|++++  +++++|.||+.+|+.+         ...|++|+.|..|..+|..
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g--v~~~vFSStAavYG~p---------~~~PI~E~~~~~p~NPYG~  144 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG--VKKFIFSSTAAVYGEP---------TTSPISETSPLAPINPYGR  144 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhC--CCEEEEecchhhcCCC---------CCcccCCCCCCCCCCcchh
Confidence            98777655  899999999999999999999976  8999988877655532         3579999999888777333


Q ss_pred             h---HHHHHHHHHhcCCCeeEEEEcCCceeeccCCC-------cchhHHHHHHHHHHhhhcCCCceecC------Ccccc
Q 015961          181 T---LEDILFEEVEKKEELSWSVHRPDTIFGFSPYS-------LMNLVGALCVYAAVCKHEGIPLRFPG------TKAAW  244 (397)
Q Consensus       181 ~---~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~g------~~~~~  244 (397)
                      +   .|++|..+. +.+++++++||..++.|..|..       ..+...++....++.+  ...+.+.|      ++...
T Consensus       145 sKlm~E~iL~d~~-~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~--r~~l~ifG~DY~T~DGT~i  221 (329)
T COG1087         145 SKLMSEEILRDAA-KANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGK--RDKLFIFGDDYDTKDGTCI  221 (329)
T ss_pred             HHHHHHHHHHHHH-HhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcC--CceeEEeCCCCCCCCCCee
Confidence            3   377777776 7788999999999999986541       1233444433333222  11133333      23334


Q ss_pred             ceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961          245 ECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  322 (397)
Q Consensus       245 ~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (397)
                      ++++|+.|.   |.+.+.+...  .....++||+++|..+|+.|+++.+.++.|.+.+.--.                  
T Consensus       222 RDYIHV~DL---A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~------------------  280 (329)
T COG1087         222 RDYIHVDDL---ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIA------------------  280 (329)
T ss_pred             eeeeehhHH---HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeC------------------
Confidence            555555443   5555554432  22233699999999999999999999999976543100                  


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCcc-CCHHHHHHHHHHHh
Q 015961          323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVK  391 (397)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~e~~~~~~~~~~  391 (397)
                                       +.     +.++   .    ..++.|.+|||+ |||+|++ +++++++++.+|..
T Consensus       281 -----------------~R-----R~GD---p----a~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~  322 (329)
T COG1087         281 -----------------PR-----RAGD---P----AILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQ  322 (329)
T ss_pred             -----------------CC-----CCCC---C----ceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhh
Confidence                             00     1111   0    156789999985 7999999 99999999999987

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.6e-37  Score=294.94  Aligned_cols=301  Identities=16%  Similarity=0.119  Sum_probs=211.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C---------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W---------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~---------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +|+|||||||||||++|+++|++     +|++|++++|.....   .         ....+++++.+|+.|.+.+..+++
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLF-----LNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            37899999999999999999999     899999999864321   0         001357889999999999999999


Q ss_pred             cCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      ++|.|+|+|+......  .++.+.+++|+.||.|++++|++.+  +++++++||..+|+..         .+.+..|+++
T Consensus        90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~v~~SS~~vyg~~---------~~~~~~e~~~  158 (348)
T PRK15181         90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH--VSSFTYAASSSTYGDH---------PDLPKIEERI  158 (348)
T ss_pred             CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeechHhhCCC---------CCCCCCCCCC
Confidence            9999999998644322  3567789999999999999999863  7899988876655432         1345566666


Q ss_pred             CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--c-hhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961          172 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--M-NLVGALCVYAAVCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~  243 (397)
                      ..|...  |+.     |+++..+. ++++++++++||++|||++....  . .+...+..  .+.  .+.++.+.|++.+
T Consensus       159 ~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~--~~~--~~~~i~~~g~g~~  231 (348)
T PRK15181        159 GRPLSP--YAVTKYVNELYADVFA-RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWIL--SLL--KDEPIYINGDGST  231 (348)
T ss_pred             CCCCCh--hhHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCcCCCCCCccccCHHHHHH--HHH--cCCCcEEeCCCCc
Confidence            555444  654     55555544 56789999999999999643211  1 12222211  111  2556677788887


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHH
Q 015961          244 WECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  321 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  321 (397)
                      .++++|+.|+   |.+++.++....  ..+++|||++++.+|++|+++.+.+.++........         ..+     
T Consensus       232 ~rd~i~v~D~---a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~---------~~~-----  294 (348)
T PRK15181        232 SRDFCYIENV---IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSR---------AEP-----  294 (348)
T ss_pred             eEeeEEHHHH---HHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccC---------CCc-----
Confidence            7777777776   677666554322  357899999999999999999999998743211000         000     


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          322 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                     .+.+.....            .....+|++|+++ +||+|+++++|+|+++++|++..
T Consensus       295 ---------------~~~~~~~~~------------~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        295 ---------------IYKDFRDGD------------VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             ---------------ccCCCCCCc------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence                           000000000            0134579999986 69999999999999999999765

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2.8e-34  Score=276.73  Aligned_cols=325  Identities=14%  Similarity=0.166  Sum_probs=207.4

Q ss_pred             CccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC--C------CCCCCceEEEccCCCHHH
Q 015961           17 EEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--W------NADHLVEYVQCDVSDPEE   87 (397)
Q Consensus        17 ~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~--~------~~~~~v~~~~~Dl~d~~~   87 (397)
                      +.+.++..+ |+|||||||||||++|+++|++     + |++|++++|+....  .      ...++++++.+|+.|.+.
T Consensus         6 ~~~~~~~~~-~~VlVTGgtGfIGs~lv~~L~~-----~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~   79 (386)
T PLN02427          6 DLDGKPIKP-LTICMIGAGGFIGSHLCEKLMT-----ETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSR   79 (386)
T ss_pred             cCCCCcccC-cEEEEECCcchHHHHHHHHHHh-----cCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHH
Confidence            445566555 6899999999999999999998     5 69999999865321  0      012468999999999999


Q ss_pred             HHHHHccCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           88 TQAKLSQLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        88 l~~~~~~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      +.++++++|.|+|+|+.....  ..++.+.+..|+.++.+++++|++.+   ++|+++||..+|+...   +...+.+.|
T Consensus        80 l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~vYg~~~---~~~~~e~~p  153 (386)
T PLN02427         80 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTI---GSFLPKDHP  153 (386)
T ss_pred             HHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeeeeeCCCc---CCCCCcccc
Confidence            999999999999998754321  12455667889999999999998753   6788888877775421   100011222


Q ss_pred             C---------CCCCCCC---C--CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC------cchhHHH
Q 015961          166 F---------TEDMPRL---D--APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS------LMNLVGA  220 (397)
Q Consensus       166 ~---------~E~~p~~---~--~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~------~~~~~~~  220 (397)
                      .         .|+.+..   +  .+...|+.     |+++..+. +..+++++++||++|||+....      .......
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~  232 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEG-AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR  232 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHH-hhcCCceEEecccceeCCCCCccccccccccccch
Confidence            2         2222111   1  11233664     45555443 5578999999999999964210      0001111


Q ss_pred             -HHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC-CCCCceeccCC-CeeehHHHHHHHHHHhCC
Q 015961          221 -LCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNG-DVFKWKHLWKVLAEQFGI  297 (397)
Q Consensus       221 -~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~-~~g~~yni~~~-~~~s~~el~~~i~~~~g~  297 (397)
                       +..++. ....+.++.+.|++.+.++++|+.|+   |++++.++.++. ..+++||++++ ..+|++|+++.+.+.+|.
T Consensus       233 ~i~~~~~-~~~~~~~~~~~g~g~~~r~~i~V~Dv---a~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        233 VLACFSN-NLLRREPLKLVDGGQSQRTFVYIKDA---IEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             HHHHHHH-HHhcCCCeEEECCCCceECcEeHHHH---HHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence             111111 11135566666766666666666555   777777665543 45789999987 589999999999999985


Q ss_pred             CCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCc
Q 015961          298 EDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGF  376 (397)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~  376 (397)
                      ........       ...+..                    ...+... ..+  .+    ....+.|++|+++ +||+|+
T Consensus       309 ~~~~~~~~-------~~~~~~--------------------~~~~~~~-~~~--~~----~~~~~~d~~k~~~~lGw~p~  354 (386)
T PLN02427        309 VSGEPALE-------EPTVDV--------------------SSKEFYG-EGY--DD----SDKRIPDMTIINKQLGWNPK  354 (386)
T ss_pred             cccccccc-------cccccc--------------------CcccccC-ccc--cc----hhhccCCHHHHHHhcCCCcC
Confidence            32110000       000000                    0000000 000  00    0145679999986 699999


Q ss_pred             cCCHHHHHHHHHHHhc
Q 015961          377 RNSKNSFITWIDKVKG  392 (397)
Q Consensus       377 ~~~~e~~~~~~~~~~~  392 (397)
                      ++++++|+++++|++.
T Consensus       355 ~~l~~gl~~~~~~~~~  370 (386)
T PLN02427        355 TSLWDLLESTLTYQHK  370 (386)
T ss_pred             ccHHHHHHHHHHHHHH
Confidence            9999999999999864

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=5.6e-34  Score=277.38  Aligned_cols=306  Identities=18%  Similarity=0.105  Sum_probs=201.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------C---------------CCCCCceEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W---------------NADHLVEYV   78 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~---------------~~~~~v~~~   78 (397)
                      ..++|+|||||||||||++|+++|++     +|++|++++|.....         .               ....+++++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~-----~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v  118 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSK-----RGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY  118 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence            34568999999999999999999999     899999987532110         0               001258899


Q ss_pred             EccCCCHHHHHHHHcc--CCCeeEEEEecccCCC--c---HHHHHHhHHHHHHHHHHHHcccCCCcc-eEEEecCCcccc
Q 015961           79 QCDVSDPEETQAKLSQ--LTDVTHIFYVTWTNRS--T---EAENCKINGSMFRNVLRAVIPNAPNLR-HVCLQTGTKHYL  150 (397)
Q Consensus        79 ~~Dl~d~~~l~~~~~~--~~~V~h~a~~~~~~~~--~---~~~~~~~nv~gt~~ll~a~~~~~~~~~-~~~~~s~~~~y~  150 (397)
                      .+|++|.+.+..++++  +|.|+|+|+.......  +   ....+++|+.|+.|++++|++.+  ++ +++++||..+|+
T Consensus       119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--v~~~~V~~SS~~vYG  196 (442)
T PLN02572        119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--PDCHLVKLGTMGEYG  196 (442)
T ss_pred             ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC--CCccEEEEecceecC
Confidence            9999999999998885  7889999865332211  2   23456899999999999999864  43 788888766665


Q ss_pred             ccccccCCCCCCCCCCC------CCC---CCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--
Q 015961          151 GPFEAFGKIKPYDPPFT------EDM---PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--  214 (397)
Q Consensus       151 ss~~~~g~~~~~~~~~~------E~~---p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--  214 (397)
                      .+.   .+.  .+.++.      |++   |..|..  .|+.     |.++..+. +++|++++++||++|||++....  
T Consensus       197 ~~~---~~~--~E~~i~~~~~~~e~~~~~~~~P~s--~Yg~SK~a~E~l~~~~~-~~~gl~~v~lR~~~vyGp~~~~~~~  268 (442)
T PLN02572        197 TPN---IDI--EEGYITITHNGRTDTLPYPKQASS--FYHLSKVHDSHNIAFTC-KAWGIRATDLNQGVVYGVRTDETMM  268 (442)
T ss_pred             CCC---CCC--cccccccccccccccccCCCCCCC--cchhHHHHHHHHHHHHH-HhcCCCEEEEecccccCCCCccccc
Confidence            321   000  011111      232   333332  3664     44554444 66799999999999999543210  


Q ss_pred             ----------ch-hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCC--CceeccCCCe
Q 015961          215 ----------MN-LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKN--EAFNCNNGDV  281 (397)
Q Consensus       215 ----------~~-~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g--~~yni~~~~~  281 (397)
                                .+ +...+..++. ....+.++.+.|++.+.++++|+.|+   |.+++.++......|  ++||+++ ..
T Consensus       269 ~~~li~~~~~~~~~~~~i~~~~~-~~~~g~~i~v~g~G~~~Rdfi~V~Dv---a~a~~~al~~~~~~g~~~i~Nigs-~~  343 (442)
T PLN02572        269 DEELINRLDYDGVFGTALNRFCV-QAAVGHPLTVYGKGGQTRGFLDIRDT---VRCIEIAIANPAKPGEFRVFNQFT-EQ  343 (442)
T ss_pred             ccccccccCcccchhhHHHHHHH-HHhcCCCceecCCCCEEECeEEHHHH---HHHHHHHHhChhhcCceeEEEeCC-Cc
Confidence                      00 0011111111 11125666677888877888877776   677766665432334  5899986 67


Q ss_pred             eehHHHHHHHHHH---hCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcC
Q 015961          282 FKWKHLWKVLAEQ---FGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTG  358 (397)
Q Consensus       282 ~s~~el~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (397)
                      +|++|+++.+.+.   +|.+.....          .+.                         +... .         ..
T Consensus       344 ~si~el~~~i~~~~~~~g~~~~~~~----------~p~-------------------------~~~~-~---------~~  378 (442)
T PLN02572        344 FSVNELAKLVTKAGEKLGLDVEVIS----------VPN-------------------------PRVE-A---------EE  378 (442)
T ss_pred             eeHHHHHHHHHHHHHhhCCCCCeee----------CCC-------------------------Cccc-c---------cc
Confidence            9999999999999   775532100          000                         0000 0         00


Q ss_pred             cccccchhhHHHcCCCCcc---CCHHHHHHHHHHHhcC
Q 015961          359 EAKLASMNKSKEHGFSGFR---NSKNSFITWIDKVKGF  393 (397)
Q Consensus       359 ~~~~~d~~k~~~lG~~p~~---~~~e~~~~~~~~~~~~  393 (397)
                      .....|++|+++|||+|.+   ++++++.++++||++.
T Consensus       379 ~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        379 HYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             cccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence            0234699999999999999   9999999999999864

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=3.3e-33  Score=264.58  Aligned_cols=298  Identities=15%  Similarity=0.154  Sum_probs=200.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHccC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      .++++|||||||||||++|+++|++     +|++|++++|+....       .. ...+++++.+|++|.+++.++++++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLE-----RGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGC   82 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcC
Confidence            4567899999999999999999999     899999999975421       10 1135788999999999999999999


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCC-ccccccccccCCCCCCCCCCCCCCCCC-
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT-KHYLGPFEAFGKIKPYDPPFTEDMPRL-  173 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~-~~y~ss~~~~g~~~~~~~~~~E~~p~~-  173 (397)
                      |.|+|+|+..   ..++...+++|+.|+.+++++|++.+  +++++++||. .+|+...      .....+++|+++.. 
T Consensus        83 d~Vih~A~~~---~~~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~------~~~~~~~~E~~~~~~  151 (342)
T PLN02214         83 DGVFHTASPV---TDDPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPN------RDPEAVVDESCWSDL  151 (342)
T ss_pred             CEEEEecCCC---CCCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCC------CCCCcccCcccCCCh
Confidence            9999998642   34577889999999999999999864  6788888864 3453210      00113466764211 


Q ss_pred             --C-CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961          174 --D-APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  245 (397)
Q Consensus       174 --~-~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  245 (397)
                        + .+...|+.     |+++..+. ++.+++++++||++|||+......+.  .+.....+.  .+.... .+  .+.+
T Consensus       152 ~~~~~p~~~Y~~sK~~aE~~~~~~~-~~~g~~~v~lRp~~vyGp~~~~~~~~--~~~~~~~~~--~g~~~~-~~--~~~~  223 (342)
T PLN02214        152 DFCKNTKNWYCYGKMVAEQAAWETA-KEKGVDLVVLNPVLVLGPPLQPTINA--SLYHVLKYL--TGSAKT-YA--NLTQ  223 (342)
T ss_pred             hhccccccHHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCceECCCCCCCCCc--hHHHHHHHH--cCCccc-CC--CCCc
Confidence              1 11223654     55655554 56799999999999999543211111  111111111  232222 22  2334


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961          246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      .++|+.|+   |++++.++..+. .++.||+++ ...+++|+++.+++.++....+              ...    .  
T Consensus       224 ~~i~V~Dv---a~a~~~al~~~~-~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~--------------~~~----~--  278 (342)
T PLN02214        224 AYVDVRDV---ALAHVLVYEAPS-ASGRYLLAE-SARHRGEVVEILAKLFPEYPLP--------------TKC----K--  278 (342)
T ss_pred             CeeEHHHH---HHHHHHHHhCcc-cCCcEEEec-CCCCHHHHHHHHHHHCCCCCCC--------------CCC----c--
Confidence            56555554   788887776543 456899987 5789999999999998632111              000    0  


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                                 ...+..               .....+|++|+++|||+| ++++|+|+++++|+++.|++|
T Consensus       279 -----------~~~~~~---------------~~~~~~d~~k~~~LG~~p-~~lee~i~~~~~~~~~~~~~~  323 (342)
T PLN02214        279 -----------DEKNPR---------------AKPYKFTNQKIKDLGLEF-TSTKQSLYDTVKSLQEKGHLA  323 (342)
T ss_pred             -----------cccCCC---------------CCccccCcHHHHHcCCcc-cCHHHHHHHHHHHHHHcCCCC
Confidence                       000000               002347999999999998 699999999999999999985

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.9e-33  Score=268.69  Aligned_cols=298  Identities=12%  Similarity=0.047  Sum_probs=205.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCC-CCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~  103 (397)
                      .+|+|||||||||||++|+++|.+     .||+|++++|........ ...++++.+|++|.+.+..++.++|.|+|+|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~-----~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKA-----EGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHh-----CCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            357999999999999999999998     899999999864322111 12357889999999998888889999999987


Q ss_pred             eccc---CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC--CCCCCCCc
Q 015961          104 VTWT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM--PRLDAPNF  178 (397)
Q Consensus       104 ~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~--p~~~~~~~  178 (397)
                      ....   ...++...+..|+.++.|++++|++.+  +++|+++||..+|+... . .   ....++.|+.  |..|... 
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~--vk~~V~~SS~~vYg~~~-~-~---~~~~~~~E~~~~p~~p~s~-  166 (370)
T PLN02695         95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARING--VKRFFYASSACIYPEFK-Q-L---ETNVSLKESDAWPAEPQDA-  166 (370)
T ss_pred             ccCCccccccCchhhHHHHHHHHHHHHHHHHHhC--CCEEEEeCchhhcCCcc-c-c---CcCCCcCcccCCCCCCCCH-
Confidence            5321   122445567889999999999998754  78999888877665321 0 0   0123456654  4445433 


Q ss_pred             chhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--chh-HHHHHHHHHHhhhcCCCceecCCccccceeeec
Q 015961          179 YYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--MNL-VGALCVYAAVCKHEGIPLRFPGTKAAWECYSIA  250 (397)
Q Consensus       179 ~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~  250 (397)
                       |+.     |+++..+. ++.+++++++||++|||+.....  ... ...+..  .+.+ .+.++.++|++.+.+.++|+
T Consensus       167 -Yg~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~--~~~~-~~~~i~~~g~g~~~r~~i~v  241 (370)
T PLN02695        167 -YGLEKLATEELCKHYT-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCR--KALT-STDEFEMWGDGKQTRSFTFI  241 (370)
T ss_pred             -HHHHHHHHHHHHHHHH-HHhCCCEEEEEECCccCCCCCccccccccHHHHHH--HHHc-CCCCeEEeCCCCeEEeEEeH
Confidence             554     55555554 56799999999999999532211  111 111211  1111 23566777888777777777


Q ss_pred             ccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHH
Q 015961          251 SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWE  330 (397)
Q Consensus       251 ~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (397)
                      .|+   ++++++++...  .+++||+++++.+|++|+++.+.+.+|.+.+...            .+             
T Consensus       242 ~D~---a~ai~~~~~~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~------------~~-------------  291 (370)
T PLN02695        242 DEC---VEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKH------------IP-------------  291 (370)
T ss_pred             HHH---HHHHHHHHhcc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCcee------------cC-------------
Confidence            665   67766655442  3578999999999999999999999986432110            00             


Q ss_pred             HHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          331 EIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                              .+...   .            ...+|++|+++ +||+|+++++++|+++++|+++.
T Consensus       292 --------~~~~~---~------------~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~  332 (370)
T PLN02695        292 --------GPEGV---R------------GRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQ  332 (370)
T ss_pred             --------CCCCc---c------------ccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence                    00000   0            12369999996 69999999999999999999753

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.4e-33  Score=273.30  Aligned_cols=286  Identities=15%  Similarity=0.145  Sum_probs=199.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ++|||||||||||++|+++|++     +|++|++++|.....      ....++++++.+|+.+.     .+.++|.|+|
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~-----~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViH  190 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIG-----RGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYH  190 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEE
Confidence            5899999999999999999999     899999999853211      11224678889998764     3467899999


Q ss_pred             EEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC-----CCC
Q 015961          101 IFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM-----PRL  173 (397)
Q Consensus       101 ~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~-----p~~  173 (397)
                      +|+.....  ..++.+.+++|+.||.+++++|++.+  . +++++||..+|+..         ...+.+|+.     |..
T Consensus       191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~-r~V~~SS~~VYg~~---------~~~p~~E~~~~~~~p~~  258 (436)
T PLN02166        191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--A-RFLLTSTSEVYGDP---------LEHPQKETYWGNVNPIG  258 (436)
T ss_pred             CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--C-EEEEECcHHHhCCC---------CCCCCCccccccCCCCC
Confidence            99864432  23678889999999999999999864  3 68888876666432         134556653     333


Q ss_pred             CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-cchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961          174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  247 (397)
Q Consensus       174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  247 (397)
                      |...  |+.     |+++..+. +..+++++++||++|||+.... .......+..  .+.  .+.++.+.|++.+.+.+
T Consensus       259 p~s~--Yg~SK~~aE~~~~~y~-~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~--~~l--~~~~i~v~g~g~~~rdf  331 (436)
T PLN02166        259 ERSC--YDEGKRTAETLAMDYH-RGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVA--QTI--RKQPMTVYGDGKQTRSF  331 (436)
T ss_pred             CCCc--hHHHHHHHHHHHHHHH-HHhCCCeEEEEEccccCCCCCCCccchHHHHHH--HHh--cCCCcEEeCCCCeEEee
Confidence            3333  553     66666655 5678999999999999954221 1111111111  111  25566677888777777


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  327 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (397)
                      +|+.|+   +++++.++...  .+++|||++++.+|++|+++.+.+.+|.+.....          .             
T Consensus       332 i~V~Dv---a~ai~~~~~~~--~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~----------~-------------  383 (436)
T PLN02166        332 QYVSDL---VDGLVALMEGE--HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEF----------K-------------  383 (436)
T ss_pred             EEHHHH---HHHHHHHHhcC--CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeee----------C-------------
Confidence            776665   77776665432  3568999999999999999999999986532100          0             


Q ss_pred             HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                  +..-..  .+          ...+|++|+++ +||+|+++++++|+++++|++++
T Consensus       384 ------------p~~~~~--~~----------~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~  426 (436)
T PLN02166        384 ------------PNTADD--PH----------KRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR  426 (436)
T ss_pred             ------------CCCCCC--cc----------ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence                        000000  00          33579999997 59999999999999999999764

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.4e-33  Score=265.14  Aligned_cols=311  Identities=16%  Similarity=0.116  Sum_probs=207.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC----CCC---------CCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN---------ADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~----~~~---------~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      |+|||||||||||++|+++|++     .|++|++++|++..    ...         ...+++++.+|++|.+.+.++++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   75 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLE-----KGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID   75 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHH-----CCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence            5899999999999999999999     89999999997531    000         01358899999999999999998


Q ss_pred             c--CCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961           94 Q--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  168 (397)
Q Consensus        94 ~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E  168 (397)
                      +  +|.|+|+|+......  .++....++|+.|+.+++++|++.+. +..+++++||..+|+..         ...+.+|
T Consensus        76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~---------~~~~~~E  146 (343)
T TIGR01472        76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKV---------QEIPQNE  146 (343)
T ss_pred             hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCC---------CCCCCCC
Confidence            6  488999998644322  24567778999999999999998642 23478888876655432         1346778


Q ss_pred             CCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHH-HhhhcCC-CceecCC
Q 015961          169 DMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAA-VCKHEGI-PLRFPGT  240 (397)
Q Consensus       169 ~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~-i~~~~~~-~~~~~g~  240 (397)
                      +.|..|...  |+.     |.++..+. ++.++++++.|+.++||+..+.  ++. ..+..++. +.  .+. +..+.|+
T Consensus       147 ~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~~~~~gp~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~g~  219 (343)
T TIGR01472       147 TTPFYPRSP--YAAAKLYAHWITVNYR-EAYGLFAVNGILFNHESPRRGE--NFVTRKITRAAAKIK--LGLQEKLYLGN  219 (343)
T ss_pred             CCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCceEEEeecccCCCCCCc--cccchHHHHHHHHHH--cCCCCceeeCC
Confidence            887766544  664     55555443 5568999999999999954322  211 11111111 11  233 2345677


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccC---
Q 015961          241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK---  317 (397)
Q Consensus       241 ~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~---  317 (397)
                      +.+.++++|+.|+   |.+++.++.+.  .+++|||++++.+|++|+++.+.+.+|.+.....          .+..   
T Consensus       220 g~~~rd~i~V~D~---a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~  284 (343)
T TIGR01472       220 LDAKRDWGHAKDY---VEAMWLMLQQD--KPDDYVIATGETHSVREFVEVSFEYIGKTLNWKD----------KGINEVG  284 (343)
T ss_pred             CccccCceeHHHH---HHHHHHHHhcC--CCccEEecCCCceeHHHHHHHHHHHcCCCccccc----------ccccccc
Confidence            7777888877776   77777666543  2368999999999999999999999996432100          0000   


Q ss_pred             HHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          318 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                      +......       ..  ..+.+...   ..+   +    .....+|++|+++ +||+|+++++|+|+++++++++
T Consensus       285 ~~~~~~~-------~~--~~~~~~~~---~~~---~----~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       285 RCKETGK-------VH--VEIDPRYF---RPT---E----VDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             cccccCc-------ee--EEeCcccc---CCC---c----cchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            0000000       00  00000000   000   0    0134579999986 6999999999999999999875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=2.1e-33  Score=266.96  Aligned_cols=311  Identities=13%  Similarity=0.227  Sum_probs=204.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--CCCCCCCceEEEccCC-CHHHHHHHHccCCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVS-DPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~-d~~~l~~~~~~~~~V~h~a~  103 (397)
                      |+|||||||||||++|+++|++.    .|++|++++|+...  .....++++++.+|++ +.+.+.++++++|.|+|+|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~----~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa   77 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILET----TDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA   77 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhC----CCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence            57999999999999999999872    37999999986532  1112346899999998 67788888899999999988


Q ss_pred             ecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC---C--CC
Q 015961          104 VTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL---D--AP  176 (397)
Q Consensus       104 ~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~---~--~~  176 (397)
                      .....  ..++...+++|+.++.+++++|++.+   ++++++||..+|+.       .  ...++.|+.+..   |  .+
T Consensus        78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~vyg~-------~--~~~~~~ee~~~~~~~~~~~p  145 (347)
T PRK11908         78 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGM-------C--PDEEFDPEASPLVYGPINKP  145 (347)
T ss_pred             cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecceeecc-------C--CCcCcCccccccccCcCCCc
Confidence            64432  23677888999999999999999753   57888887665542       1  123455554321   1  12


Q ss_pred             CcchhHHH-----HHHHHHhcCCCeeEEEEcCCceeeccCCCc-------chhHHHHHHHHHHhhhcCCCceecCCcccc
Q 015961          177 NFYYTLED-----ILFEEVEKKEELSWSVHRPDTIFGFSPYSL-------MNLVGALCVYAAVCKHEGIPLRFPGTKAAW  244 (397)
Q Consensus       177 ~~~y~~e~-----~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  244 (397)
                      ...|+..|     ++..+. ++.+++++++||+++||++....       ..+...+   +. ....+.++.+.+++.+.
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~-~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~---~~-~~~~~~~~~~~~~g~~~  220 (347)
T PRK11908        146 RWIYACSKQLMDRVIWAYG-MEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQF---LG-HIVRGEPISLVDGGSQK  220 (347)
T ss_pred             cchHHHHHHHHHHHHHHHH-HHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHH---HH-HHhCCCceEEecCCcee
Confidence            23477544     444443 56789999999999999643210       1111111   11 11135566666666666


Q ss_pred             ceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCC-CeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHH
Q 015961          245 ECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  321 (397)
Q Consensus       245 ~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  321 (397)
                      +.++|+.|+   +.+++.++.++.  ..+++|||+++ ..+|++|+++.+.+.+|..+.. ..         .+..+ ++
T Consensus       221 r~~i~v~D~---a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~-~~---------~~~~~-~~  286 (347)
T PRK11908        221 RAFTDIDDG---IDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEY-AE---------SAKKV-KL  286 (347)
T ss_pred             eccccHHHH---HHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccc-cc---------ccccc-cc
Confidence            666666555   777777666543  45789999987 4799999999999999854221 00         00000 00


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          322 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      ...              ....+.. ..+  .+    ...+..|++|+++ +||+|+++++|+++++++|+++.
T Consensus       287 ~~~--------------~~~~~~~-~~~--~~----~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~  338 (347)
T PRK11908        287 VET--------------TSGAYYG-KGY--QD----VQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH  338 (347)
T ss_pred             ccC--------------CchhccC-cCc--ch----hccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            000              0000000 000  00    0134568999985 69999999999999999999764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=3.9e-33  Score=266.08  Aligned_cols=307  Identities=14%  Similarity=0.109  Sum_probs=206.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEE-EeCCCCC-C---C---CCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRPKP-N---W---NADHLVEYVQCDVSDPEETQAKLSQ--LT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~-l~R~~~~-~---~---~~~~~v~~~~~Dl~d~~~l~~~~~~--~~   96 (397)
                      ++|||||||||||++|+++|++     +|++|++ ++|.... .   .   ....+++++.+|++|.+++.+++++  +|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIIN-----ETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHH-----cCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCC
Confidence            6899999999999999999998     7887554 4443221 1   0   0113577899999999999998885  78


Q ss_pred             CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHccc-------CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPN-------APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~-------~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      .|+|+|+......  .++.+.+++|+.|+.+++++|++.       ...+++++++||..+|+       .......+++
T Consensus        77 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg-------~~~~~~~~~~  149 (355)
T PRK10217         77 CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYG-------DLHSTDDFFT  149 (355)
T ss_pred             EEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcC-------CCCCCCCCcC
Confidence            8999987654322  256788999999999999999763       12367888888665553       2111234678


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc-chhHHHHHHHHHHhhhcCCCceecCCc
Q 015961          168 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEGIPLRFPGTK  241 (397)
Q Consensus       168 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~g~~  241 (397)
                      |+.+..|...  |+.     |+++..+. ++.+++++++||++|||+  +.. ..+...+   +. ....+.++.+.|++
T Consensus       150 E~~~~~p~s~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~r~~~v~Gp--~~~~~~~~~~~---~~-~~~~~~~~~~~g~g  220 (355)
T PRK10217        150 ETTPYAPSSP--YSASKASSDHLVRAWL-RTYGLPTLITNCSNNYGP--YHFPEKLIPLM---IL-NALAGKPLPVYGNG  220 (355)
T ss_pred             CCCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCeEEEeeeeeeCC--CCCcccHHHHH---HH-HHhcCCCceEeCCC
Confidence            8877665444  554     55555554 667899999999999994  432 1222212   11 11125566667877


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHH
Q 015961          242 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  321 (397)
Q Consensus       242 ~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  321 (397)
                      .+.++++|+.|+   |.+++.++.. ...+++|||++++.+|++|+++.+++.+|...+..+            ..+.. 
T Consensus       221 ~~~~~~i~v~D~---a~a~~~~~~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~------------~~~~~-  283 (355)
T PRK10217        221 QQIRDWLYVEDH---ARALYCVATT-GKVGETYNIGGHNERKNLDVVETICELLEELAPNKP------------QGVAH-  283 (355)
T ss_pred             CeeeCcCcHHHH---HHHHHHHHhc-CCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccc------------ccccc-
Confidence            777666665555   7777666654 445789999999999999999999999986432211            10000 


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          322 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      ...       .   ....+....            ......+|++|+++ |||+|.++++|+|+++++|++..
T Consensus       284 ~~~-------~---~~~~~~~~~------------~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~  334 (355)
T PRK10217        284 YRD-------L---ITFVADRPG------------HDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN  334 (355)
T ss_pred             ccc-------c---ceecCCCCC------------CCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence            000       0   000000000            00134579999975 79999999999999999999765

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=4e-33  Score=284.97  Aligned_cols=316  Identities=16%  Similarity=0.209  Sum_probs=209.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHH-HHHHHccCCCeeEEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEE-TQAKLSQLTDVTHIF  102 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~-l~~~~~~~~~V~h~a  102 (397)
                      .++|||||||||||++|+++|++.    .||+|++++|.+...  ....++++++.+|++|... +.++++++|.|+|+|
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA  390 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRD----DNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV  390 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhC----CCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence            468999999999999999999972    379999999976431  1223478999999998765 577889999999999


Q ss_pred             EecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC---CCC--
Q 015961          103 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR---LDA--  175 (397)
Q Consensus       103 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~---~~~--  175 (397)
                      +.....  ..++.+.+++|+.++.+++++|++.+   ++++++||..+|       |..  ...+++|+.+.   .|.  
T Consensus       391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~---~~~V~~SS~~vy-------g~~--~~~~~~E~~~~~~~~p~~~  458 (660)
T PRK08125        391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN---KRIIFPSTSEVY-------GMC--TDKYFDEDTSNLIVGPINK  458 (660)
T ss_pred             cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC---CeEEEEcchhhc-------CCC--CCCCcCccccccccCCCCC
Confidence            865432  23567788999999999999999864   578888866555       421  13456777643   121  


Q ss_pred             CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc--hh--HHHHHHHHHHhhhcCCCceecCCccccce
Q 015961          176 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM--NL--VGALCVYAAVCKHEGIPLRFPGTKAAWEC  246 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~--~~--~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  246 (397)
                      +...|+.     |+++..+. +.++++++++||++|||++.....  ..  ...+..++. ....+.++.+.|++.+.++
T Consensus       459 p~s~Yg~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~-~~~~~~~i~~~g~g~~~rd  536 (660)
T PRK08125        459 QRWIYSVSKQLLDRVIWAYG-EKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL-NLVEGSPIKLVDGGKQKRC  536 (660)
T ss_pred             CccchHHHHHHHHHHHHHHH-HhcCCceEEEEEceeeCCCccccccccccccchHHHHHH-HhcCCCCeEEeCCCceeec
Confidence            2234664     55555554 567899999999999995432110  00  001111111 1112566667787777777


Q ss_pred             eeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC-eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhc
Q 015961          247 YSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  323 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (397)
                      ++|+.|+   |.+++.++.+..  ..+++||+++++ .+|++|+++.+.+.+|.+......          +..  ....
T Consensus       537 ~i~v~Dv---a~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~----------~~~--~~~~  601 (660)
T PRK08125        537 FTDIRDG---IEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHF----------PPF--AGFR  601 (660)
T ss_pred             eeeHHHH---HHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccC----------Ccc--cccc
Confidence            7777665   777766665432  357899999985 799999999999999964321110          000  0000


Q ss_pred             cchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCC
Q 015961          324 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK  394 (397)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~  394 (397)
                      .             ........ ..|  .+.    ....+|++|+|+ |||+|+++++|+|+++++|+++..
T Consensus       602 ~-------------~~~~~~~~-~~~--~~~----~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~  653 (660)
T PRK08125        602 V-------------VESSSYYG-KGY--QDV----EHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTV  653 (660)
T ss_pred             c-------------cccccccc-ccc--ccc----cccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence            0             00000000 000  000    134579999986 699999999999999999999764

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=7.5e-33  Score=262.52  Aligned_cols=300  Identities=16%  Similarity=0.127  Sum_probs=206.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC----CCC--------CCCCceEEEccCCCHHHHHH
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN--------ADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~----~~~--------~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      +.++++|||||||||||++|+++|++     +|++|++++|++..    ...        ...+++++.+|++|.+.+.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   77 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLS-----KGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR   77 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence            44568999999999999999999999     89999999986532    110        01357899999999999988


Q ss_pred             HHcc--CCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCC---CcceEEEecCCccccccccccCCCCCCC
Q 015961           91 KLSQ--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAP---NLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        91 ~~~~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~---~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                      +++.  +|.|+|+|+......  .++...+++|+.|+.+++++|++.+.   ++++++++||..+|       |..   .
T Consensus        78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vy-------g~~---~  147 (340)
T PLN02653         78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMY-------GST---P  147 (340)
T ss_pred             HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHh-------CCC---C
Confidence            8875  478999987643322  25567779999999999999987642   13478877765555       432   2


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHH-HHHHHH-HhhhcCCCc-
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA-LCVYAA-VCKHEGIPL-  235 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~-i~~~~~~~~-  235 (397)
                      .+++|+.|..|...  |+.     |.++..+. ++++++++..|+.++||+..+  .++... +..++. +.  .+.++ 
T Consensus       148 ~~~~E~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~~~~~gp~~~--~~~~~~~~~~~~~~~~--~~~~~~  220 (340)
T PLN02653        148 PPQSETTPFHPRSP--YAVAKVAAHWYTVNYR-EAYGLFACNGILFNHESPRRG--ENFVTRKITRAVGRIK--VGLQKK  220 (340)
T ss_pred             CCCCCCCCCCCCCh--hHHHHHHHHHHHHHHH-HHcCCeEEEeeeccccCCCCC--cccchhHHHHHHHHHH--cCCCCc
Confidence            36788888776544  554     55555443 567888899999999995332  222211 211111 22  23333 


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR  315 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~  315 (397)
                      .+.|++.+.++++|+.|+   |.+++.++...  .++.||+++++.+|++|+++.+.+.+|.+....           ..
T Consensus       221 ~~~g~g~~~rd~i~v~D~---a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~-----------~~  284 (340)
T PLN02653        221 LFLGNLDASRDWGFAGDY---VEAMWLMLQQE--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDH-----------VE  284 (340)
T ss_pred             eEeCCCcceecceeHHHH---HHHHHHHHhcC--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcc-----------ee
Confidence            345777777777776665   77777766543  256899999999999999999999998642110           00


Q ss_pred             cCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          316 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                      ...                 ....+...               ....+|++|+++ |||+|+++++|+|+++++|+++
T Consensus       285 ~~~-----------------~~~~~~~~---------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~  330 (340)
T PLN02653        285 IDP-----------------RYFRPAEV---------------DNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE  330 (340)
T ss_pred             eCc-----------------ccCCcccc---------------ccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence            000                 00001000               133579999986 6999999999999999998874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=9.6e-33  Score=283.56  Aligned_cols=302  Identities=15%  Similarity=0.125  Sum_probs=211.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-C---C---CCCCCceEEEccCCCHHHHHHHH--ccC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-N---W---NADHLVEYVQCDVSDPEETQAKL--SQL   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~---~---~~~~~v~~~~~Dl~d~~~l~~~~--~~~   95 (397)
                      .+|+|||||||||||++|+++|++..   .+++|++++|.... .   .   ...++++++.+|++|.+.+..++  .++
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g---~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   81 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNY---PDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGI   81 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhC---CCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence            34799999999999999999999721   26899999985311 0   0   11247899999999998887665  568


Q ss_pred             CCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL  173 (397)
Q Consensus        96 ~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~  173 (397)
                      |.|+|+|+......  .++.+.+++|+.||.+++++|++.+ .+++++++||..+|+...  ..    ...+..|+.+..
T Consensus        82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~--~~----~~~~~~E~~~~~  154 (668)
T PLN02260         82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETD--ED----ADVGNHEASQLL  154 (668)
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCc--cc----cccCccccCCCC
Confidence            88999987644322  2566788999999999999999864 478999998877665321  00    012235666655


Q ss_pred             CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc-hhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961          174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  247 (397)
Q Consensus       174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  247 (397)
                      |...  |+.     |+++..+. ++.+++++++||++|||+  +... .+...+   .... ..+.++.+.|++.+.+++
T Consensus       155 p~~~--Y~~sK~~aE~~v~~~~-~~~~l~~vilR~~~VyGp--~~~~~~~i~~~---~~~a-~~g~~i~i~g~g~~~r~~  225 (668)
T PLN02260        155 PTNP--YSATKAGAEMLVMAYG-RSYGLPVITTRGNNVYGP--NQFPEKLIPKF---ILLA-MQGKPLPIHGDGSNVRSY  225 (668)
T ss_pred             CCCC--cHHHHHHHHHHHHHHH-HHcCCCEEEECcccccCc--CCCcccHHHHH---HHHH-hCCCCeEEecCCCceEee
Confidence            5444  553     66666554 567899999999999994  4321 222222   1111 135566777888777777


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  327 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (397)
                      +|+.|+   |++++.++.. ...+++||+++++.+|++|+++.+++.+|.+......                       
T Consensus       226 ihV~Dv---a~a~~~~l~~-~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~-----------------------  278 (668)
T PLN02260        226 LYCEDV---AEAFEVVLHK-GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIK-----------------------  278 (668)
T ss_pred             EEHHHH---HHHHHHHHhc-CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceee-----------------------
Confidence            777776   6666655533 4457899999999999999999999999975321000                       


Q ss_pred             HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCC
Q 015961          328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFK  394 (397)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~  394 (397)
                              + ....++.             ...+.+|++|++++||+|.++++|+|+++++|+++.+
T Consensus       279 --------~-~~~~p~~-------------~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~  323 (668)
T PLN02260        279 --------F-VENRPFN-------------DQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP  323 (668)
T ss_pred             --------e-cCCCCCC-------------cceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence                    0 0000110             0134579999999999999999999999999998764

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=261.02  Aligned_cols=303  Identities=15%  Similarity=0.096  Sum_probs=197.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHcc
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      +.++++||||||+||||++|+++|++     +|++|++++|+....        ....++++++.+|++|.+++...+++
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   80 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQ-----KGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAG   80 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHH-----CCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhc
Confidence            34467899999999999999999999     899999999875321        11113588999999999999999999


Q ss_pred             CCCeeEEEEecccCCCcH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC---
Q 015961           95 LTDVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM---  170 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~---  170 (397)
                      +|.|+|+|+.......++ ...+++|+.|+.++++++++.. .+++++++||..+|+... ..+.    ..+.+|+.   
T Consensus        81 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~-~~~~----~~~~~E~~~~~  154 (338)
T PLN00198         81 CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINK-LSGT----GLVMNEKNWTD  154 (338)
T ss_pred             CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccC-CCCC----CceeccccCCc
Confidence            999999987532222233 3567999999999999998752 477899888776664320 0010    12333331   


Q ss_pred             ------CCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 015961          171 ------PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG  239 (397)
Q Consensus       171 ------p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g  239 (397)
                            +..|...  |+.     |+++..+. ++.+++++++||++|||++..........+  ...+.  .+.++.+.|
T Consensus       155 ~~~~~~~~~p~~~--Y~~sK~~~E~~~~~~~-~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~--~~~~~--~~~~~~~~g  227 (338)
T PLN00198        155 VEFLTSEKPPTWG--YPASKTLAEKAAWKFA-EENNIDLITVIPTLMAGPSLTSDIPSSLSL--AMSLI--TGNEFLING  227 (338)
T ss_pred             hhhhhhcCCccch--hHHHHHHHHHHHHHHH-HhcCceEEEEeCCceECCCccCCCCCcHHH--HHHHH--cCCcccccc
Confidence                  1112222  554     55555555 667899999999999996432111111111  11111  133333333


Q ss_pred             -Cccc----cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 015961          240 -TKAA----WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ  314 (397)
Q Consensus       240 -~~~~----~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  314 (397)
                       .+.+    .++++|+   +++|++++.++.... .++.|+ +++..+|++|+++.+.+.++....+             
T Consensus       228 ~~~~~~~~~~~~~i~V---~D~a~a~~~~~~~~~-~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~-------------  289 (338)
T PLN00198        228 LKGMQMLSGSISITHV---EDVCRAHIFLAEKES-ASGRYI-CCAANTSVPELAKFLIKRYPQYQVP-------------  289 (338)
T ss_pred             ccccccccCCcceeEH---HHHHHHHHHHhhCcC-cCCcEE-EecCCCCHHHHHHHHHHHCCCCCCC-------------
Confidence             1111    1345554   445777777665533 334685 5567899999999999887532111             


Q ss_pred             ccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCC
Q 015961          315 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFK  394 (397)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~  394 (397)
                       ..                  ++..+..                ....+|.+|++++||+|+++++|+|+++++|+++++
T Consensus       290 -~~------------------~~~~~~~----------------~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~  334 (338)
T PLN00198        290 -TD------------------FGDFPSK----------------AKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKG  334 (338)
T ss_pred             -cc------------------ccccCCC----------------CccccChHHHHhCCceecCcHHHHHHHHHHHHHHcC
Confidence             00                  0000000                023479999998999999999999999999999999


Q ss_pred             CC
Q 015961          395 IV  396 (397)
Q Consensus       395 ~~  396 (397)
                      ++
T Consensus       335 ~~  336 (338)
T PLN00198        335 LL  336 (338)
T ss_pred             CC
Confidence            87

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.2e-33  Score=240.44  Aligned_cols=302  Identities=17%  Similarity=0.153  Sum_probs=218.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC---C-CC---CCCCCCceEEEccCCCHHHHHHHHc--cCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP---K-PN---WNADHLVEYVQCDVSDPEETQAKLS--QLTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~---~-~~---~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~   97 (397)
                      +++|||||+||||++.+..+..+++   .++.+.++--.   . ..   ....++.+++.+|+.+...+...+.  .+|.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p---~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYP---DYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCC---CCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence            7999999999999999999998663   44666665421   1 11   1234788999999999988777664  3667


Q ss_pred             eeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        98 V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      |+|.|+.+....+  ++.+....|+.+|..|+++++..+ ++++|+++||..+||.+.       . .....|.+.+.|.
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~-------~-~~~~~E~s~~nPt  154 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSD-------E-DAVVGEASLLNPT  154 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCcc-------c-cccccccccCCCC
Confidence            9999887665433  778888999999999999999864 699999998777665431       1 1222377776776


Q ss_pred             CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc-chhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 015961          176 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI  249 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~  249 (397)
                      .+  |+.     |..+..+. ++++++++++|.++|||  |+.. .....   .|+.+.. .+.+..+.|++.+.+.+++
T Consensus       155 np--yAasKaAaE~~v~Sy~-~sy~lpvv~~R~nnVYG--P~q~~~klip---kFi~l~~-~~~~~~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  155 NP--YAASKAAAEMLVRSYG-RSYGLPVVTTRMNNVYG--PNQYPEKLIP---KFIKLAM-RGKEYPIHGDGLQTRSYLY  225 (331)
T ss_pred             Cc--hHHHHHHHHHHHHHHh-hccCCcEEEEeccCccC--CCcChHHHhH---HHHHHHH-hCCCcceecCcccceeeEe
Confidence            66  554     55555555 88999999999999999  6533 22222   3333232 3667788999999999999


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHH
Q 015961          250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW  329 (397)
Q Consensus       250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (397)
                      +.|+   ++++-.+. ..+..|++|||+++...+..|+++.+.+.+++..+....           .+...++.      
T Consensus       226 veD~---~ea~~~v~-~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~-----------~p~~~~v~------  284 (331)
T KOG0747|consen  226 VEDV---SEAFKAVL-EKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDT-----------EPFIFFVE------  284 (331)
T ss_pred             HHHH---HHHHHHHH-hcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCC-----------CCcceecC------
Confidence            9887   45544444 447779999999999999999999999998875443211           11101111      


Q ss_pred             HHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          330 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                ..+..+             .++.+|.+|+|.|||+|+++.++||+.+++||.++
T Consensus       285 ----------dRp~nd-------------~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~  325 (331)
T KOG0747|consen  285 ----------DRPYND-------------LRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN  325 (331)
T ss_pred             ----------CCCccc-------------ccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence                      111111             16678999999999999999999999999999765

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.8e-32  Score=266.09  Aligned_cols=286  Identities=17%  Similarity=0.130  Sum_probs=197.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      |+|||||||||||++|+++|++     +|++|++++|.....      .....+++++.+|+.++     .+.++|.|+|
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~-----~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViH  189 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMA-----RGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYH  189 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHH-----CcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEE
Confidence            6899999999999999999999     899999998753211      11234678899998775     3467899999


Q ss_pred             EEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC-----CCC
Q 015961          101 IFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM-----PRL  173 (397)
Q Consensus       101 ~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~-----p~~  173 (397)
                      +|+.....  ..++.+.+++|+.|+.||+++|++.+  + +++++||..+|+..         ...+.+|+.     |..
T Consensus       190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~-r~V~~SS~~VYg~~---------~~~p~~E~~~~~~~P~~  257 (442)
T PLN02206        190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--A-RFLLTSTSEVYGDP---------LQHPQVETYWGNVNPIG  257 (442)
T ss_pred             eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--C-EEEEECChHHhCCC---------CCCCCCccccccCCCCC
Confidence            99865432  23677889999999999999999864  3 68888876666432         123455553     222


Q ss_pred             CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-cchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961          174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  247 (397)
Q Consensus       174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  247 (397)
                      +.  ..|+.     |+++..+. +..+++++++||+++||+.... .......+   +. ....+.++.++|++.+.+++
T Consensus       258 ~~--s~Y~~SK~~aE~~~~~y~-~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~---i~-~~l~~~~i~i~g~G~~~rdf  330 (442)
T PLN02206        258 VR--SCYDEGKRTAETLTMDYH-RGANVEVRIARIFNTYGPRMCIDDGRVVSNF---VA-QALRKEPLTVYGDGKQTRSF  330 (442)
T ss_pred             cc--chHHHHHHHHHHHHHHHH-HHhCCCeEEEEeccccCCCCCccccchHHHH---HH-HHHcCCCcEEeCCCCEEEeE
Confidence            22  23654     55555554 5678999999999999954221 11222112   11 11125566777888777777


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  327 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (397)
                      +|+.|+   |++++.++...  .+++|||++++.+|++|+++.+++.+|.+.....          .+.           
T Consensus       331 i~V~Dv---a~ai~~a~e~~--~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~----------~p~-----------  384 (442)
T PLN02206        331 QFVSDL---VEGLMRLMEGE--HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEF----------RPN-----------  384 (442)
T ss_pred             EeHHHH---HHHHHHHHhcC--CCceEEEcCCCceeHHHHHHHHHHHhCCCCceee----------CCC-----------
Confidence            776665   77777666432  3568999999999999999999999985422100          000           


Q ss_pred             HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                 ....     .+          ...+|++|+++ +||+|+++++|+|+++++|+++.
T Consensus       385 -----------~~~~-----~~----------~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~  425 (442)
T PLN02206        385 -----------TEDD-----PH----------KRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQR  425 (442)
T ss_pred             -----------CCCC-----cc----------ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence                       0000     00          23479999986 69999999999999999999764

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=1.8e-32  Score=247.22  Aligned_cols=304  Identities=18%  Similarity=0.194  Sum_probs=207.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCceEEEccCCCHHHHHHHHccC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      ++++|+|||||||||++++++|++     +||.|++.+|++...        +. ..+++..+.+||+|.+++..++.+|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~-----rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc   79 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLS-----RGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC   79 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHh-----CCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence            567999999999999999999999     899999999987652        11 2345889999999999999999999


Q ss_pred             CCeeEEEEecccCCC-cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNRS-TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~-~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      |.|||+|+....... ++.+..++++.||.|+|++|++.. .|++++++||...-...    ++.......++|+....+
T Consensus        80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~----~~~~~~~~vvdE~~wsd~  154 (327)
T KOG1502|consen   80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYN----GPNIGENSVVDEESWSDL  154 (327)
T ss_pred             CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccC----CcCCCCCcccccccCCcH
Confidence            999999886554333 355899999999999999999964 79999999864433211    011112345566543211


Q ss_pred             C----CCcchh-----HHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961          175 A----PNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  245 (397)
Q Consensus       175 ~----~~~~y~-----~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  245 (397)
                      .    ....|.     .|+...++. ++.+++.+.+.|+.|+||.-....+.  .....+.+.+  |..-.+++.   +.
T Consensus       155 ~~~~~~~~~Y~~sK~lAEkaAw~fa-~e~~~~lv~inP~lV~GP~l~~~l~~--s~~~~l~~i~--G~~~~~~n~---~~  226 (327)
T KOG1502|consen  155 DFCRCKKLWYALSKTLAEKAAWEFA-KENGLDLVTINPGLVFGPGLQPSLNS--SLNALLKLIK--GLAETYPNF---WL  226 (327)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHH-HhCCccEEEecCCceECCCcccccch--hHHHHHHHHh--cccccCCCC---ce
Confidence            0    012244     277777776 77799999999999999543221222  1111122222  211112221   11


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961          246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      .   ..|++++|.+++.+.+.+.+.|+ |.|.+ ...++.|+++++.+.+..-..+...                     
T Consensus       227 ~---~VdVrDVA~AHv~a~E~~~a~GR-yic~~-~~~~~~ei~~~l~~~~P~~~ip~~~---------------------  280 (327)
T KOG1502|consen  227 A---FVDVRDVALAHVLALEKPSAKGR-YICVG-EVVSIKEIADILRELFPDYPIPKKN---------------------  280 (327)
T ss_pred             e---eEeHHHHHHHHHHHHcCcccCce-EEEec-CcccHHHHHHHHHHhCCCCCCCCCC---------------------
Confidence            2   34555569999998888777755 87776 4555999999999887543211000                     


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                                   ......            ......+|.+|++++|+.-.++++|++.+++++++++|.++
T Consensus       281 -------------~~~~~~------------~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~  327 (327)
T KOG1502|consen  281 -------------AEEHEG------------FLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL  327 (327)
T ss_pred             -------------Cccccc------------cccccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence                         000000            00023479999999985559999999999999999999874

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2e-32  Score=257.78  Aligned_cols=298  Identities=16%  Similarity=0.171  Sum_probs=199.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +++|||||||||||++|+++|++     +|++|++++|+....        .. ..++++++.+|++|++.+..+++++|
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQ-----RGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCE   78 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHH-----CCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCC
Confidence            47899999999999999999999     899999999875421        00 12468899999999999999999999


Q ss_pred             CeeEEEEecccCCCcHH-HHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC-CCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNRSTEA-ENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-PYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~-~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+.......++. ..+++|+.|+.+++++|++. .++++++++||...+     .|+... ....+++|+.+..|
T Consensus        79 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~v~~SS~~~~-----~y~~~~~~~~~~~~E~~~~~p  152 (322)
T PLN02662         79 GVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV-PSVKRVVVTSSMAAV-----AYNGKPLTPDVVVDETWFSDP  152 (322)
T ss_pred             EEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEEccCHHHh-----cCCCcCCCCCCcCCcccCCCh
Confidence            99999875432223443 77899999999999999875 237799988875422     232111 11345777766544


Q ss_pred             C----CCcchhHH-----HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961          175 A----PNFYYTLE-----DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  245 (397)
Q Consensus       175 ~----~~~~y~~e-----~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  245 (397)
                      .    ....|+..     +++..+. ++.+++++++||+++||+......+....+  ...+..  +.+ .++   .+.+
T Consensus       153 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~--~~~~~~--~~~-~~~---~~~~  223 (322)
T PLN02662        153 AFCEESKLWYVLSKTLAEEAAWKFA-KENGIDMVTINPAMVIGPLLQPTLNTSAEA--ILNLIN--GAQ-TFP---NASY  223 (322)
T ss_pred             hHhhcccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCcccCCCCCCCCCchHHH--HHHHhc--CCc-cCC---CCCc
Confidence            2    11236654     4444443 567899999999999995322111111111  111111  322 122   2334


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961          246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      +++|+.|   +|++++.++..+.. ++.||++ +..+|++|+++.+.+.++....+.           . ..        
T Consensus       224 ~~i~v~D---va~a~~~~~~~~~~-~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~~~-----------~-~~--------  278 (322)
T PLN02662        224 RWVDVRD---VANAHIQAFEIPSA-SGRYCLV-ERVVHYSEVVKILHELYPTLQLPE-----------K-CA--------  278 (322)
T ss_pred             CeEEHHH---HHHHHHHHhcCcCc-CCcEEEe-CCCCCHHHHHHHHHHHCCCCCCCC-----------C-CC--------
Confidence            5555555   47887777665433 3468887 578999999999999876421110           0 00        


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~  396 (397)
                                   ...+.              .....+|++|++++||++ ++++|+++++++||+++|++
T Consensus       279 -------------~~~~~--------------~~~~~~d~~k~~~lg~~~-~~~~~~l~~~~~~~~~~~~~  321 (322)
T PLN02662        279 -------------DDKPY--------------VPTYQVSKEKAKSLGIEF-IPLEVSLKDTVESLKEKGFL  321 (322)
T ss_pred             -------------Ccccc--------------ccccccChHHHHHhCCcc-ccHHHHHHHHHHHHHHcCCC
Confidence                         00000              002347999999999996 79999999999999999986

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4e-32  Score=255.99  Aligned_cols=301  Identities=19%  Similarity=0.191  Sum_probs=203.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +|+||||||+||||++|+++|++     +|++|++++|++....         ....+++++.+|++|.+++.++++++|
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   79 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLF-----RGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCE   79 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence            47999999999999999999999     8999999988754310         011367899999999999999999999


Q ss_pred             CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+......  +++...+++|+.|+.+++++|.+.. .+++|+++||...|.+.....+    ...+++|+.+..|
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~----~~~~~~E~~~~~p  154 (325)
T PLN02989         80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLG----PNDVVDETFFTNP  154 (325)
T ss_pred             EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCC----CCCccCcCCCCch
Confidence            9999987533222  2456788999999999999998742 3578888887655533210011    1345778877654


Q ss_pred             CC----CcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961          175 AP----NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  245 (397)
Q Consensus       175 ~~----~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  245 (397)
                      ..    ...|+.     |+++..+. ++.+++++++||+++||+......++...+  ...+.  .+.+..  +  .+.+
T Consensus       155 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~--i~~~~--~~~~~~--~--~~~r  225 (325)
T PLN02989        155 SFAEERKQWYVLSKTLAEDAAWRFA-KDNEIDLIVLNPGLVTGPILQPTLNFSVAV--IVELM--KGKNPF--N--TTHH  225 (325)
T ss_pred             hHhcccccchHHHHHHHHHHHHHHH-HHcCCeEEEEcCCceeCCCCCCCCCchHHH--HHHHH--cCCCCC--C--CcCc
Confidence            21    123654     55555554 567899999999999995432212222111  11111  132211  1  1234


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961          246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      .++|+.|   +|.+++.++..+. .+++||++ +..+|++|+++.+.+.++......           .+.         
T Consensus       226 ~~i~v~D---va~a~~~~l~~~~-~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~~~~-----------~~~---------  280 (325)
T PLN02989        226 RFVDVRD---VALAHVKALETPS-ANGRYIID-GPVVTIKDIENVLREFFPDLCIAD-----------RNE---------  280 (325)
T ss_pred             CeeEHHH---HHHHHHHHhcCcc-cCceEEEe-cCCCCHHHHHHHHHHHCCCCCCCC-----------CCC---------
Confidence            5555555   4788777765543 35689995 568999999999999987321100           000         


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~  396 (397)
                                   +.....             ..+...|++|+++|||+|.++++|+|+++++|+++.|.+
T Consensus       281 -------------~~~~~~-------------~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~~  325 (325)
T PLN02989        281 -------------DITELN-------------SVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCLV  325 (325)
T ss_pred             -------------Cccccc-------------ccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence                         000000             003457999999999999999999999999999988863

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=8.7e-33  Score=258.54  Aligned_cols=289  Identities=12%  Similarity=0.141  Sum_probs=185.9

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH---HH-HHHHc-----cCCCee
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE---ET-QAKLS-----QLTDVT   99 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~---~l-~~~~~-----~~~~V~   99 (397)
                      |||||||||||++|+++|++     .|++|+++.|+.....   ....+..+|+.|..   ++ ...+.     ++|.|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~-----~g~~~v~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi   73 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGT---KFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF   73 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHh-----CCCceEEEecCCCcch---HHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence            89999999999999999998     7998777766533211   01223456666543   32 33332     578899


Q ss_pred             EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcc
Q 015961          100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  179 (397)
Q Consensus       100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~  179 (397)
                      |+|+.......++...++.|+.++.+|+++|++.+  + +++++||..+|+..         ...+.+|+.+..|...  
T Consensus        74 h~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~--~-~~i~~SS~~vyg~~---------~~~~~~E~~~~~p~~~--  139 (308)
T PRK11150         74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATYGGR---------TDDFIEEREYEKPLNV--  139 (308)
T ss_pred             ECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC--C-cEEEEcchHHhCcC---------CCCCCccCCCCCCCCH--
Confidence            99985443333556678999999999999999864  4 57888876655431         1234567666555444  


Q ss_pred             hhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHH-HHhhhcCC-CceecCCccccceeeeccc
Q 015961          180 YTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYA-AVCKHEGI-PLRFPGTKAAWECYSIASD  252 (397)
Q Consensus       180 y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~i~~~~~~-~~~~~g~~~~~~~~~~~~d  252 (397)
                      |+.     |+++..+. .+.+++++++||++|||++..........+..+. .+.+  +. +..+.|++...++++|+.|
T Consensus       140 Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~g~~~~~r~~i~v~D  216 (308)
T PRK11150        140 YGYSKFLFDEYVRQIL-PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNN--GENPKLFEGSENFKRDFVYVGD  216 (308)
T ss_pred             HHHHHHHHHHHHHHHH-HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhc--CCCCEEecCCCceeeeeeeHHH
Confidence            664     55555554 5568999999999999954322111111111111 1222  33 3344566655566666666


Q ss_pred             HHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHH
Q 015961          253 ADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEI  332 (397)
Q Consensus       253 a~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (397)
                      +   |.+++.++...  .+++||++++..+|++|+++.+.+.+|......           .+.+               
T Consensus       217 ~---a~a~~~~~~~~--~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~-----------~~~~---------------  265 (308)
T PRK11150        217 V---AAVNLWFWENG--VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEY-----------IPFP---------------  265 (308)
T ss_pred             H---HHHHHHHHhcC--CCCeEEcCCCCceeHHHHHHHHHHHhCCCccee-----------ccCc---------------
Confidence            5   66666665442  356999999999999999999999998531110           0000               


Q ss_pred             HHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCc-cCCHHHHHHHHHHHh
Q 015961          333 VRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGF-RNSKNSFITWIDKVK  391 (397)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~-~~~~e~~~~~~~~~~  391 (397)
                              .....  .       .. .....|++|++++||+|+ .+++|+|+++++|+.
T Consensus       266 --------~~~~~--~-------~~-~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        266 --------DKLKG--R-------YQ-AFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN  307 (308)
T ss_pred             --------ccccc--c-------cc-eecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence                    00000  0       00 023479999999999987 599999999999975

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=5.6e-32  Score=257.89  Aligned_cols=303  Identities=17%  Similarity=0.133  Sum_probs=205.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------C--CCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W--NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~--~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      |+++|||||||||||++|+++|++     .|++|++++|.....         .  ....+++++.+|++|++.+..+++
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~   78 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLL-----AGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFA   78 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHH
Confidence            458999999999999999999998     799999998753211         0  012468899999999999988886


Q ss_pred             --cCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                        ++|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  +++++++||..+|+..         ...+++|+
T Consensus        79 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~---------~~~~~~E~  147 (352)
T PLN02240         79 STRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG--CKKLVFSSSATVYGQP---------EEVPCTEE  147 (352)
T ss_pred             hCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhCCC---------CCCCCCCC
Confidence              478899998753222  23567789999999999999998753  6788888876555421         24567888


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-----cchhHHHHHHHH-HHhhhcCCCceec
Q 015961          170 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-----LMNLVGALCVYA-AVCKHEGIPLRFP  238 (397)
Q Consensus       170 ~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~-~i~~~~~~~~~~~  238 (397)
                      .|..+...  |+.     |+++..+.....+++++++|++++||+.+..     .......+..++ .+..+...++.+.
T Consensus       148 ~~~~~~~~--Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PLN02240        148 FPLSATNP--YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVF  225 (352)
T ss_pred             CCCCCCCH--HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEe
Confidence            87766443  664     5555544322357899999999999964321     000001111111 1222112233333


Q ss_pred             C------CccccceeeecccHHHHHHHHHHHhcC----CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhc
Q 015961          239 G------TKAAWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEE  308 (397)
Q Consensus       239 g------~~~~~~~~~~~~da~~la~~~~~~~~~----~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~  308 (397)
                      |      ++.+.++++|+.|+   |++++.++..    ....+++||+++++.+|++|+++.+++.+|.+.+....    
T Consensus       226 g~~~~~~~g~~~~~~i~v~D~---a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~----  298 (352)
T PLN02240        226 GNDYPTKDGTGVRDYIHVMDL---ADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLA----  298 (352)
T ss_pred             CCCCCCCCCCEEEeeEEHHHH---HHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeC----
Confidence            3      45666677776666   6655554432    23446899999999999999999999999865332100    


Q ss_pred             CCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHH
Q 015961          309 GGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWI  387 (397)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~  387 (397)
                            +.                      .+...               ..+.+|++|+++ |||+|+++++|++++++
T Consensus       299 ------~~----------------------~~~~~---------------~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~  335 (352)
T PLN02240        299 ------PR----------------------RPGDA---------------EEVYASTEKAEKELGWKAKYGIDEMCRDQW  335 (352)
T ss_pred             ------CC----------------------CCCCh---------------hhhhcCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence                  00                      00000               023469999986 69999999999999999


Q ss_pred             HHHhcCCC
Q 015961          388 DKVKGFKI  395 (397)
Q Consensus       388 ~~~~~~~~  395 (397)
                      +|+++++.
T Consensus       336 ~~~~~~~~  343 (352)
T PLN02240        336 NWASKNPY  343 (352)
T ss_pred             HHHHhCcc
Confidence            99998864

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.1e-31  Score=252.75  Aligned_cols=298  Identities=17%  Similarity=0.166  Sum_probs=199.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CC----CCCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN----ADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~----~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +++|||||||||||++|+++|++     .|++|+++.|+....     ..    ...+++++.+|++|.+.+.++++++|
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   79 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLL-----RGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCD   79 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCC
Confidence            57999999999999999999999     899999999875431     00    12468899999999999999999999


Q ss_pred             CeeEEEEecccCCCcH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC-CCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-PYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+.......++ .+.+++|+.|+.+++++|++. ..+++|+++||...|.     |+... ....+++|+.+..|
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~-----~~~~~~~~~~~~~E~~~~~p  153 (322)
T PLN02986         80 AVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVL-----FRQPPIEANDVVDETFFSDP  153 (322)
T ss_pred             EEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhhee-----cCCccCCCCCCcCcccCCCh
Confidence            9999987533222233 456899999999999999874 2478999998765441     22110 11334667654333


Q ss_pred             C----CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961          175 A----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  245 (397)
Q Consensus       175 ~----~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  245 (397)
                      .    +...|+.     |+.+.++. ++++++++++||+.|||+......++...+.  ....  .+.++  .+  .+.+
T Consensus       154 ~~~~~~~~~Y~~sK~~aE~~~~~~~-~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~--~~~~--~g~~~--~~--~~~~  224 (322)
T PLN02986        154 SLCRETKNWYPLSKILAENAAWEFA-KDNGIDMVVLNPGFICGPLLQPTLNFSVELI--VDFI--NGKNL--FN--NRFY  224 (322)
T ss_pred             HHhhccccchHHHHHHHHHHHHHHH-HHhCCeEEEEcccceeCCCCCCCCCccHHHH--HHHH--cCCCC--CC--CcCc
Confidence            1    1233654     55555554 5679999999999999953221112111111  1111  13332  22  2334


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961          246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      .++|+.   ++|++++.++..+.. ++.||++ +..+|++|+++.+.+.++..  .++.            .        
T Consensus       225 ~~v~v~---Dva~a~~~al~~~~~-~~~yni~-~~~~s~~e~~~~i~~~~~~~--~~~~------------~--------  277 (322)
T PLN02986        225 RFVDVR---DVALAHIKALETPSA-NGRYIID-GPIMSVNDIIDILRELFPDL--CIAD------------T--------  277 (322)
T ss_pred             ceeEHH---HHHHHHHHHhcCccc-CCcEEEe-cCCCCHHHHHHHHHHHCCCC--CCCC------------C--------
Confidence            555554   458888887766544 3589995 56899999999999998631  1110            0        


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~  396 (397)
                                  -.+...             ......+|++|+++|||+|+ +++|+++++++|+++.|+|
T Consensus       278 ------------~~~~~~-------------~~~~~~~d~~~~~~lg~~~~-~l~e~~~~~~~~~~~~~~~  322 (322)
T PLN02986        278 ------------NEESEM-------------NEMICKVCVEKVKNLGVEFT-PMKSSLRDTILSLKEKCLL  322 (322)
T ss_pred             ------------Cccccc-------------cccCCccCHHHHHHcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence                        000000             00012369999999999985 9999999999999999986

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=1e-31  Score=255.84  Aligned_cols=299  Identities=15%  Similarity=0.132  Sum_probs=194.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----N----ADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~----~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +++|||||||||||++|+++|++     +|++|++++|+.....     .    ...+++++.+|++|.+.+.++++++|
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d   79 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLE-----RGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT   79 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHH-----CCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence            46899999999999999999998     8999999998753320     0    01257889999999999999999999


Q ss_pred             CeeEEEEecccCCCcH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCC-CCCCCCC--
Q 015961           97 DVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP-FTEDMPR--  172 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~-~~E~~p~--  172 (397)
                      .|+|+|+.......++ .+.+++|+.|+.+++++|++.+ .+++|+++||...|+...        ...+ ++|+...  
T Consensus        80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~~--------~~~~~~~E~~~~~~  150 (351)
T PLN02650         80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVEE--------HQKPVYDEDCWSDL  150 (351)
T ss_pred             EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccCC--------CCCCccCcccCCch
Confidence            9999987533222233 4678999999999999998753 367888888765443210        0122 3444210  


Q ss_pred             ----C-CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          173 ----L-DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       173 ----~-~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                          . +.+...|+.     |.++..+. +++|++++++||++|||+.....  ....+...+  ....+.... .+...
T Consensus       151 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilRp~~v~Gp~~~~~--~~~~~~~~~--~~~~~~~~~-~~~~~  224 (351)
T PLN02650        151 DFCRRKKMTGWMYFVSKTLAEKAAWKYA-AENGLDFISIIPTLVVGPFISTS--MPPSLITAL--SLITGNEAH-YSIIK  224 (351)
T ss_pred             hhhhccccccchHHHHHHHHHHHHHHHH-HHcCCeEEEECCCceECCCCCCC--CCccHHHHH--HHhcCCccc-cCcCC
Confidence                1 111223664     55555554 66799999999999999543221  111111111  111122111 11111


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  322 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (397)
                       .++++|+.|   +|.+++.++..+.. ++.| ++++..+|++|+++.+.+.++....+.            ...     
T Consensus       225 -~r~~v~V~D---va~a~~~~l~~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~------------~~~-----  281 (351)
T PLN02650        225 -QGQFVHLDD---LCNAHIFLFEHPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYNIPA------------RFP-----  281 (351)
T ss_pred             -CcceeeHHH---HHHHHHHHhcCcCc-CceE-EecCCCcCHHHHHHHHHHhCcccCCCC------------CCC-----
Confidence             235555555   47887777765433 3478 556688999999999999876321110            000     


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961          323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                                    +. +...               .....|++|++++||+|+++++|+|+++++|+++.+++|
T Consensus       282 --------------~~-~~~~---------------~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~  326 (351)
T PLN02650        282 --------------GI-DEDL---------------KSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP  326 (351)
T ss_pred             --------------Cc-Cccc---------------ccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence                          00 0000               023468999988999999999999999999999999875

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.6e-31  Score=254.29  Aligned_cols=300  Identities=15%  Similarity=0.100  Sum_probs=201.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHccC--C
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQL--T   96 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~~~--~   96 (397)
                      ++|+|||||||||||++|++.|++     .|++|++++|+.....      ....+++++.+|++|.+++.++++.+  |
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d   77 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLE-----LGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPE   77 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHH-----CCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCC
Confidence            357999999999999999999999     8999999998764321      01135778999999999999988864  7


Q ss_pred             CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+......  .++...+++|+.++.+++++|+..+ .+++++++||..+|+..        ....++.|+.+..|
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS~~vyg~~--------~~~~~~~e~~~~~p  148 (349)
T TIGR02622        78 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTSDKCYRND--------EWVWGYRETDPLGG  148 (349)
T ss_pred             EEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEechhhhCCC--------CCCCCCccCCCCCC
Confidence            7999987543322  2667888999999999999998653 36788888876656431        01235677766655


Q ss_pred             CCCcchhH-----HHHHHHHHhcC-------CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          175 APNFYYTL-----EDILFEEVEKK-------EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       175 ~~~~~y~~-----e~~l~~~~~~~-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                      ...  |+.     |.++..+. ++       .+++++++||+.|||++......+...+   +... ..+.++.+ +++.
T Consensus       149 ~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~---~~~~-~~g~~~~~-~~g~  220 (349)
T TIGR02622       149 HDP--YSSSKACAELVIASYR-SSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDV---IRAF-SSNKIVII-RNPD  220 (349)
T ss_pred             CCc--chhHHHHHHHHHHHHH-HHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHH---HHHH-hcCCCeEE-CCCC
Confidence            444  553     55554443 22       3899999999999995321111222222   1111 12455444 4566


Q ss_pred             ccceeeecccHHHHHHHHHHHhcC----CCCCCCceeccCC--CeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcccc
Q 015961          243 AWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNG--DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRV  316 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~----~~~~g~~yni~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  316 (397)
                      +.+.++|+.|+   |.+++.++..    +...+++|||+++  ..+|+.|++..+.+.++.....+..         .+.
T Consensus       221 ~~rd~i~v~D~---a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~---------~~~  288 (349)
T TIGR02622       221 ATRPWQHVLEP---LSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWED---------DSD  288 (349)
T ss_pred             cccceeeHHHH---HHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceee---------ccC
Confidence            77788877765   5565554432    1233679999975  6899999999999887642211110         000


Q ss_pred             CHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          317 KLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      +                    ..+...               ....+|++|+++ +||+|+++++++++++++|+++.
T Consensus       289 ~--------------------~~~~~~---------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~  331 (349)
T TIGR02622       289 L--------------------NHPHEA---------------RLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAW  331 (349)
T ss_pred             C--------------------CCCccc---------------ceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            0                    000000               034579999987 69999999999999999998753

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=5.6e-31  Score=249.60  Aligned_cols=299  Identities=15%  Similarity=0.089  Sum_probs=199.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc--cCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--QLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~--~~~   96 (397)
                      ++|||||||||||++|+++|++     +|++|++++|......        ....++.++.+|++|.+.+..++.  ++|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   75 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQ-----NGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAID   75 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHH-----CCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCC
Confidence            3799999999999999999998     8999999986432110        012346788999999999888886  478


Q ss_pred             CeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC-C
Q 015961           97 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-L  173 (397)
Q Consensus        97 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~-~  173 (397)
                      .|+|+|+.....  ...+.+.+++|+.++.+++++|++.+  +++++++||..+|+..         ...+++|++|. .
T Consensus        76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~yg~~---------~~~~~~E~~~~~~  144 (338)
T PRK10675         76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNLIFSSSATVYGDQ---------PKIPYVESFPTGT  144 (338)
T ss_pred             EEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhhCCC---------CCCccccccCCCC
Confidence            899998654322  12456788999999999999999764  6788888876555421         24567788775 3


Q ss_pred             CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc---h--hHHHHHHH-HHHhhhcCCCceecC---
Q 015961          174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM---N--LVGALCVY-AAVCKHEGIPLRFPG---  239 (397)
Q Consensus       174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~---~--~~~~~~~~-~~i~~~~~~~~~~~g---  239 (397)
                      |..  .|+.     |+++..+.....+++++++|++.+||+.|....   .  ....+..+ ..+..+...++...|   
T Consensus       145 p~~--~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (338)
T PRK10675        145 PQS--PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_pred             CCC--hhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcC
Confidence            433  3554     555555431234799999999999996543111   0  00111111 111211112222222   


Q ss_pred             ---CccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 015961          240 ---TKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ  314 (397)
Q Consensus       240 ---~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  314 (397)
                         ++.+.++++|+.|+   |++++.++..  ....+++|||++++.+|++|+++.+.+.+|.+.....          .
T Consensus       223 ~~~~g~~~~~~v~v~D~---a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~  289 (338)
T PRK10675        223 PTEDGTGVRDYIHVMDL---ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHF----------A  289 (338)
T ss_pred             CCCCCcEEEeeEEHHHH---HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeee----------C
Confidence               34555566666555   6666666543  2234689999999999999999999999997532210          0


Q ss_pred             ccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          315 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      +.                      .+...               ....+|++|+++ +||+|+++++++|+++++|++++
T Consensus       290 ~~----------------------~~~~~---------------~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        290 PR----------------------REGDL---------------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             CC----------------------CCCch---------------hhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence            00                      00000               023479999986 59999999999999999999874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=7.9e-31  Score=247.41  Aligned_cols=320  Identities=17%  Similarity=0.129  Sum_probs=209.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      ++||||||+||||++|++.|++     .|++|++++|++.... ....+++++.+|++|.+++.++++++|.|+|+++..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLE-----QGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHH-----CCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            3799999999999999999998     8999999999765421 122368899999999999999999999999998753


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC-CcchhH--
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP-NFYYTL--  182 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~-~~~y~~--  182 (397)
                      .....++...+++|+.++.++++++++.+  +++++++||..+|+..        ....+.+|+.+..+.. ...|+.  
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~--------~~~~~~~e~~~~~~~~~~~~Y~~sK  145 (328)
T TIGR03466        76 RLWAPDPEEMYAANVEGTRNLLRAALEAG--VERVVYTSSVATLGVR--------GDGTPADETTPSSLDDMIGHYKRSK  145 (328)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEechhhcCcC--------CCCCCcCccCCCCcccccChHHHHH
Confidence            32334677889999999999999998753  6788888876555421        1134677877765432 223654  


Q ss_pred             ---HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961          183 ---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  259 (397)
Q Consensus       183 ---e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  259 (397)
                         |+++.++. ...+++++++||+.+||++....... ..+.  ..... .+.+ .+.+.+   ..+++   ++++|++
T Consensus       146 ~~~e~~~~~~~-~~~~~~~~ilR~~~~~G~~~~~~~~~-~~~~--~~~~~-~~~~-~~~~~~---~~~i~---v~D~a~a  213 (328)
T TIGR03466       146 FLAEQAALEMA-AEKGLPVVIVNPSTPIGPRDIKPTPT-GRII--VDFLN-GKMP-AYVDTG---LNLVH---VDDVAEG  213 (328)
T ss_pred             HHHHHHHHHHH-HhcCCCEEEEeCCccCCCCCCCCCcH-HHHH--HHHHc-CCCc-eeeCCC---cceEE---HHHHHHH
Confidence               55556554 45689999999999999543222111 1111  11111 1222 222222   23444   4455777


Q ss_pred             HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCC
Q 015961          260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  339 (397)
Q Consensus       260 ~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (397)
                      ++.++.. ...++.||++ ++.+|++|+++.+.+.+|.+.....          .|..+...+....+.+..   ..+..
T Consensus       214 ~~~~~~~-~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~---~~~~~  278 (328)
T TIGR03466       214 HLLALER-GRIGERYILG-GENLTLKQILDKLAEITGRPAPRVK----------LPRWLLLPVAWGAEALAR---LTGKE  278 (328)
T ss_pred             HHHHHhC-CCCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCc----------CCHHHHHHHHHHHHHHHH---hcCCC
Confidence            7766655 3457788886 6889999999999999997644321          122221111111111211   11211


Q ss_pred             cccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961          340 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~~  396 (397)
                      + .+.      .....+...++.+|++|+++ +||+|. +++++|+++++||++.|.+
T Consensus       279 ~-~~~------~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~~  328 (328)
T TIGR03466       279 P-RVT------VDGVRMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGYL  328 (328)
T ss_pred             C-CCC------HHHHHHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence            1 000      00000111256789999986 699995 9999999999999998864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=6.3e-31  Score=250.62  Aligned_cols=310  Identities=14%  Similarity=0.079  Sum_probs=204.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCC-CC------CCCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK-PN------WNADHLVEYVQCDVSDPEETQAKLSQ--LT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~-~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~   96 (397)
                      ++|||||||||||++|+++|++     +|++ |++++|... ..      .....+++++.+|++|.+++.+++..  +|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   75 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIIN-----NTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPD   75 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHH-----hCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence            3799999999999999999998     6765 666665321 11      00123577899999999999998874  78


Q ss_pred             CeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccC-------CCcceEEEecCCccccccccccCCCC-CCC-CC
Q 015961           97 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNA-------PNLRHVCLQTGTKHYLGPFEAFGKIK-PYD-PP  165 (397)
Q Consensus        97 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~-------~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~-~~  165 (397)
                      .|+|+|+.....  ..++.+.+++|+.|+.+++++|++..       .++.+++++||..+|+..... .... ... .+
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~~~~~~~  154 (352)
T PRK10084         76 AVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHP-DEVENSEELPL  154 (352)
T ss_pred             EEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcc-ccccccccCCC
Confidence            899998764332  22567889999999999999998641       235688888877766431000 0000 001 23


Q ss_pred             CCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCC
Q 015961          166 FTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT  240 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~  240 (397)
                      ++|+.+..|...  |+.     |+++..+. +.++++++++||+.|||+... ...+...+..    ....+.++.+.|+
T Consensus       155 ~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~-~~~g~~~vilr~~~v~Gp~~~-~~~~~~~~~~----~~~~~~~~~~~~~  226 (352)
T PRK10084        155 FTETTAYAPSSP--YSASKASSDHLVRAWL-RTYGLPTIVTNCSNNYGPYHF-PEKLIPLVIL----NALEGKPLPIYGK  226 (352)
T ss_pred             ccccCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCEEEEeccceeCCCcC-ccchHHHHHH----HHhcCCCeEEeCC
Confidence            677777666544  654     55555544 567899999999999994321 1122222211    1112445566677


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961          241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  320 (397)
Q Consensus       241 ~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
                      +.+.++++|+.|+   |.+++.++.. ...+++||+++++.+|++|+++.+++.+|...+..           .+.  ..
T Consensus       227 g~~~~~~v~v~D~---a~a~~~~l~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~-----------~~~--~~  289 (352)
T PRK10084        227 GDQIRDWLYVEDH---ARALYKVVTE-GKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA-----------TSY--RE  289 (352)
T ss_pred             CCeEEeeEEHHHH---HHHHHHHHhc-CCCCceEEeCCCCcCcHHHHHHHHHHHhccccccc-----------cch--hh
Confidence            7777777766665   7777666554 44578999999999999999999999998642210           000  00


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      .              .........            ....+.+|++|+++ +||+|+++++|+|+++++|+++.
T Consensus       290 ~--------------~~~~~~~~~------------~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~  337 (352)
T PRK10084        290 Q--------------ITYVADRPG------------HDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN  337 (352)
T ss_pred             h--------------ccccccCCC------------CCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence            0              000000000            00134579999986 79999999999999999999864

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.2e-30  Score=244.95  Aligned_cols=296  Identities=14%  Similarity=0.125  Sum_probs=204.1

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCC---C----CCCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKP---N----WNADHLVEYVQCDVSDPEETQAKLSQ--LT   96 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~---~----~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~   96 (397)
                      +|||||||||||++|+++|++     .|  ++|++++|....   .    ....++++++.+|++|++++.+++++  +|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILN-----EHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHH-----hCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCC
Confidence            589999999999999999997     45  789999874211   0    11123688999999999999999987  78


Q ss_pred             CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+......  .++...+++|+.++.+++++|.+...+. +++++||..+|++.       . ...+.+|+.+..|
T Consensus        76 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~v~g~~-------~-~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEF-RFHHISTDEVYGDL-------E-KGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCc-eEEEeeccceeCCC-------C-CCCCcCCCCCCCC
Confidence            8999987544322  2567788999999999999998753323 67888876666432       1 1225677776555


Q ss_pred             CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 015961          175 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI  249 (397)
Q Consensus       175 ~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~  249 (397)
                      ...  |+.     |.++..+. ++.+++++++||+.+||+... ...+...+..  .+.  .+.++.+.+++.+.++++|
T Consensus       147 ~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~R~~~i~G~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~g~~~~~~i~  218 (317)
T TIGR01181       147 SSP--YSASKAASDHLVRAYH-RTYGLPALITRCSNNYGPYQF-PEKLIPLMIT--NAL--AGKPLPVYGDGQQVRDWLY  218 (317)
T ss_pred             CCc--hHHHHHHHHHHHHHHH-HHhCCCeEEEEeccccCCCCC-cccHHHHHHH--HHh--cCCCceEeCCCceEEeeEE
Confidence            433  554     55555544 567899999999999994321 1222222211  111  2445566677766666666


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHH
Q 015961          250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW  329 (397)
Q Consensus       250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (397)
                      +.|+   |+++..+..+ ...+++||+++++.+|++|+++.+.+.+|.+......                 ..      
T Consensus       219 v~D~---a~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~-----------------~~------  271 (317)
T TIGR01181       219 VEDH---CRAIYLVLEK-GRVGETYNIGGGNERTNLEVVETILELLGKDEDLITH-----------------VE------  271 (317)
T ss_pred             HHHH---HHHHHHHHcC-CCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccc-----------------cC------
Confidence            5554   7777666644 4457899999999999999999999999864321100                 00      


Q ss_pred             HHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCC
Q 015961          330 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI  395 (397)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~  395 (397)
                                ..+ ..            .....+|++|+++ +||+|.++++++++++++||+++++
T Consensus       272 ----------~~~-~~------------~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~  315 (317)
T TIGR01181       272 ----------DRP-GH------------DRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEW  315 (317)
T ss_pred             ----------CCc-cc------------hhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccC
Confidence                      000 00            0022479999975 7999999999999999999998765

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=3.4e-31  Score=247.56  Aligned_cols=282  Identities=16%  Similarity=0.141  Sum_probs=193.2

Q ss_pred             EEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEEeccc
Q 015961           30 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYVTWT  107 (397)
Q Consensus        30 LVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~~~~~  107 (397)
                      ||||||||||++|+++|++     .|++|+++.+.             ..+|++|.+++.+.++.  +|.|+|+|+....
T Consensus         1 lItGa~GfiG~~l~~~L~~-----~g~~v~~~~~~-------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~   62 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEA-----LGFTNLVLRTH-------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGG   62 (306)
T ss_pred             CcccCCCcccHHHHHHHHh-----CCCcEEEeecc-------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecc
Confidence            6999999999999999998     78887766532             15899999999888875  5779999986432


Q ss_pred             ---CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC----CCCCCCCcch
Q 015961          108 ---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM----PRLDAPNFYY  180 (397)
Q Consensus       108 ---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~----p~~~~~~~~y  180 (397)
                         ...++.+.+++|+.++.+++++|++.+  +++++++||..+|+..         ...|++|++    |..|... .|
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~SS~~vyg~~---------~~~~~~E~~~~~~~~~p~~~-~Y  130 (306)
T PLN02725         63 IHANMTYPADFIRENLQIQTNVIDAAYRHG--VKKLLFLGSSCIYPKF---------APQPIPETALLTGPPEPTNE-WY  130 (306)
T ss_pred             cchhhhCcHHHHHHHhHHHHHHHHHHHHcC--CCeEEEeCceeecCCC---------CCCCCCHHHhccCCCCCCcc-hH
Confidence               123567788999999999999999864  7789988876655431         245677765    2223222 26


Q ss_pred             hH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-c--chhHHHHHHHHHHhhhcCCCcee-cCCccccceeeecc
Q 015961          181 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-L--MNLVGALCVYAAVCKHEGIPLRF-PGTKAAWECYSIAS  251 (397)
Q Consensus       181 ~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-~--~~~~~~~~~~~~i~~~~~~~~~~-~g~~~~~~~~~~~~  251 (397)
                      +.     |+++..+. +..+++++++||+.|||+.... .  ..+...+..........+.++.+ .|++.+.++++|+.
T Consensus       131 ~~sK~~~e~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  209 (306)
T PLN02725        131 AIAKIAGIKMCQAYR-IQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVD  209 (306)
T ss_pred             HHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHH
Confidence            54     44444444 5678999999999999964321 1  11122221111011123555444 67777666666655


Q ss_pred             cHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHH
Q 015961          252 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  331 (397)
Q Consensus       252 da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (397)
                      |+   +++++.++... ..++.||++++..+|+.|+++.+.+.+|.+......          +                
T Consensus       210 Dv---~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~----------~----------------  259 (306)
T PLN02725        210 DL---ADAVVFLMRRY-SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWD----------T----------------  259 (306)
T ss_pred             HH---HHHHHHHHhcc-ccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeec----------C----------------
Confidence            55   77777666543 334679999999999999999999999864321000          0                


Q ss_pred             HHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          332 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                            ..+..               .....+|++|++++||+|+++++|+|+++++|+++.
T Consensus       260 ------~~~~~---------------~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~  300 (306)
T PLN02725        260 ------SKPDG---------------TPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN  300 (306)
T ss_pred             ------CCCCc---------------ccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence                  00000               002357999999899999999999999999999865

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=3.4e-31  Score=246.27  Aligned_cols=286  Identities=13%  Similarity=0.071  Sum_probs=186.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV  104 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~~  104 (397)
                      |+||||||+||||++|+++|++     +| +|++++|...          .+.+|++|.+.+.+++++  +|.|+|+|+.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~-----~g-~V~~~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAP-----LG-NLIALDVHST----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhc-----cC-CEEEeccccc----------cccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            3799999999999999999998     67 7999988631          246899999999988884  6889999886


Q ss_pred             cccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          105 TWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       105 ~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      .....  .++...+++|+.++.+|+++|++.+  . +++++||..+|++.         ...|++|+++..|...  |+.
T Consensus        65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~-~~v~~Ss~~Vy~~~---------~~~p~~E~~~~~P~~~--Yg~  130 (299)
T PRK09987         65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--A-WVVHYSTDYVFPGT---------GDIPWQETDATAPLNV--YGE  130 (299)
T ss_pred             CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEccceEECCC---------CCCCcCCCCCCCCCCH--HHH
Confidence            55432  2567778999999999999999865  3 57777776666432         1457888888666544  887


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCC--ccccceeeecccHHHHHHHH
Q 015961          183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT--KAAWECYSIASDADLIAEHQ  260 (397)
Q Consensus       183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~--~~~~~~~~~~~da~~la~~~  260 (397)
                      .|...|........+++|+||++|||+..   .++...+   +...+ .+.++.+.++  +.+.... ++  +++++.++
T Consensus       131 sK~~~E~~~~~~~~~~~ilR~~~vyGp~~---~~~~~~~---~~~~~-~~~~~~v~~d~~g~~~~~~-~~--~d~~~~~~  200 (299)
T PRK09987        131 TKLAGEKALQEHCAKHLIFRTSWVYAGKG---NNFAKTM---LRLAK-EREELSVINDQFGAPTGAE-LL--ADCTAHAI  200 (299)
T ss_pred             HHHHHHHHHHHhCCCEEEEecceecCCCC---CCHHHHH---HHHHh-cCCCeEEeCCCcCCCCCHH-HH--HHHHHHHH
Confidence            77776655444456789999999999432   2332222   11111 2445555554  2222111 22  23344444


Q ss_pred             HHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCc
Q 015961          261 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQP  340 (397)
Q Consensus       261 ~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (397)
                      ..++.. ...+++||+++++.+|+.|+++.+.+.++......+..      .-.+.+...               +....
T Consensus       201 ~~~~~~-~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~------~i~~~~~~~---------------~~~~~  258 (299)
T PRK09987        201 RVALNK-PEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALN------KLNAVPTSA---------------YPTPA  258 (299)
T ss_pred             HHhhcc-CCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcC------eeeecchhh---------------cCCCC
Confidence            433322 22346999999999999999999988654321100000      000111110               10000


Q ss_pred             ccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHH
Q 015961          341 TRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV  390 (397)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~  390 (397)
                         .+            -.+..+|++|+++ +||+| .+++|+|+++++.+
T Consensus       259 ---~r------------p~~~~ld~~k~~~~lg~~~-~~~~~~l~~~~~~~  293 (299)
T PRK09987        259 ---RR------------PHNSRLNTEKFQQNFALVL-PDWQVGVKRMLTEL  293 (299)
T ss_pred             ---CC------------CCcccCCHHHHHHHhCCCC-ccHHHHHHHHHHHH
Confidence               00            0145689999997 69997 49999999999865

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.98  E-value=2.1e-30  Score=242.97  Aligned_cols=296  Identities=20%  Similarity=0.221  Sum_probs=207.8

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC-CCeeEEEEecc
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL-TDVTHIFYVTW  106 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~V~h~a~~~~  106 (397)
                      +|||||||||||++|+++|++     +||+|++++|..........+++++.+|++|.+.+...+..+ |.|+|+|+...
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~   76 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLA-----AGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSS   76 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHh-----CCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCCCEEEEccccCc
Confidence            499999999999999999999     899999999976543221146889999999998888888888 89999998765


Q ss_pred             cCCC---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC-CCCCCCCCcchhH
Q 015961          107 TNRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED-MPRLDAPNFYYTL  182 (397)
Q Consensus       107 ~~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~-~p~~~~~~~~y~~  182 (397)
                      ....   ++.+.+++|+.++.+++++|++.  .++++++.||..+|+..        ....+++|+ .|..|..  .|+.
T Consensus        77 ~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~--~~~~~v~~ss~~~~~~~--------~~~~~~~E~~~~~~p~~--~Yg~  144 (314)
T COG0451          77 VPDSNASDPAEFLDVNVDGTLNLLEAARAA--GVKRFVFASSVSVVYGD--------PPPLPIDEDLGPPRPLN--PYGV  144 (314)
T ss_pred             hhhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCCCceECCC--------CCCCCcccccCCCCCCC--HHHH
Confidence            4433   24568999999999999999983  48888886654434321        123367787 4555544  4764


Q ss_pred             -----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcch--hHHHHHHHHHHhhhcCCC-ceecCCccccceeeecccHH
Q 015961          183 -----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN--LVGALCVYAAVCKHEGIP-LRFPGTKAAWECYSIASDAD  254 (397)
Q Consensus       183 -----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~i~~~~~~~-~~~~g~~~~~~~~~~~~da~  254 (397)
                           |+++..+. +..+++++++||+.|||++.....+  +...+  ...+.  .+.+ +.+.+++.+.+.++++.|  
T Consensus       145 sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~i~v~D--  217 (314)
T COG0451         145 SKLAAEQLLRAYA-RLYGLPVVILRPFNVYGPGDKPDLSSGVVSAF--IRQLL--KGEPIIVIGGDGSQTRDFVYVDD--  217 (314)
T ss_pred             HHHHHHHHHHHHH-HHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHH--HHHHH--hCCCcceEeCCCceeEeeEeHHH--
Confidence                 55555554 4567999999999999954322111  11111  11112  2444 455666665556666555  


Q ss_pred             HHHHHHHHHhcCCCCCCCceeccCCC-eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHH
Q 015961          255 LIAEHQIWAAVDPYAKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIV  333 (397)
Q Consensus       255 ~la~~~~~~~~~~~~~g~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (397)
                       ++.+++.++.++...  +||++++. ..+++|+++.+.+.+|.....+..           ...               
T Consensus       218 -~a~~~~~~~~~~~~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-----------~~~---------------  268 (314)
T COG0451         218 -VADALLLALENPDGG--VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVY-----------IPL---------------  268 (314)
T ss_pred             -HHHHHHHHHhCCCCc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceee-----------cCC---------------
Confidence             477777777654444  89999997 899999999999999987442110           000               


Q ss_pred             HHhCCCcccccccccchhhhhhhcCcccccchhhHH-HcCCCCccCCHHHHHHHHHHHhcCC
Q 015961          334 RENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFK  394 (397)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~~~~~~  394 (397)
                           ....             .......+|.+|++ ++||.|..++++++.++++|+....
T Consensus       269 -----~~~~-------------~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         269 -----GRRG-------------DLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             -----CCCC-------------cccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence                 0000             01114457999998 5799999999999999999987654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.98  E-value=1.8e-30  Score=247.33  Aligned_cols=305  Identities=14%  Similarity=0.174  Sum_probs=194.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      +++||||||+||||++|+++|++     +|++|++++|+....      +....+++++.+|++|.+.+.+++.++|.|+
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQ-----RGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF   84 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence            46899999999999999999999     899999999875321      1112468899999999999999999999999


Q ss_pred             EEEEecccCC----CcHHH-----HHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTNR----STEAE-----NCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus       100 h~a~~~~~~~----~~~~~-----~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      |+|+......    .++..     .+++|+.|+.+++++|++.. .+++|+++||..+|+... .-|.   ...+++|+.
T Consensus        85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~-~~~~---~~~~~~E~~  159 (353)
T PLN02896         85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKD-SNGR---WRAVVDETC  159 (353)
T ss_pred             ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccc-cCCC---CCCccCccc
Confidence            9988643321    13333     34556799999999998753 367899888777665320 0010   013455552


Q ss_pred             C--CC----C-CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC--ce
Q 015961          171 P--RL----D-APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP--LR  236 (397)
Q Consensus       171 p--~~----~-~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~--~~  236 (397)
                      +  ..    + .+...|+.     |+++..+. +..+++++++||++|||+......+.  .+...+...  .+.+  ..
T Consensus       160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~--~~~~~~~~~--~g~~~~~~  234 (353)
T PLN02896        160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYA-KENGIDLVSVITTTVAGPFLTPSVPS--SIQVLLSPI--TGDSKLFS  234 (353)
T ss_pred             CCcHHHhhccCCCCccHHHHHHHHHHHHHHHH-HHcCCeEEEEcCCcccCCCcCCCCCc--hHHHHHHHh--cCCccccc
Confidence            2  10    0 11223664     55555554 66789999999999999533211111  111111111  1222  11


Q ss_pred             ecCCccc---cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCc
Q 015961          237 FPGTKAA---WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGT  313 (397)
Q Consensus       237 ~~g~~~~---~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~  313 (397)
                      ..+....   .++++|+   +++|++++.++..+. .++.||+ ++..+|++|+++.+.+.++.....+.          
T Consensus       235 ~~~~~~~~~~~~dfi~v---~Dva~a~~~~l~~~~-~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~----------  299 (353)
T PLN02896        235 ILSAVNSRMGSIALVHI---EDICDAHIFLMEQTK-AEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVR----------  299 (353)
T ss_pred             cccccccccCceeEEeH---HHHHHHHHHHHhCCC-cCccEEe-cCCCCCHHHHHHHHHHhCCCCCcccc----------
Confidence            1111111   1244444   445777777765433 3456865 56789999999999998863211100          


Q ss_pred             cccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          314 QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                            +.  +...   ..+          ....|.+|++++||+|.++++++|+++++|+++.
T Consensus       300 ----------------------~~--~~~~---~~~----------~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~~  342 (353)
T PLN02896        300 ----------------------LD--EEKR---GSI----------PSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDH  342 (353)
T ss_pred             ----------------------cc--cccc---Ccc----------ccccCHHHHHHcCCCccCCHHHHHHHHHHHHHHC
Confidence                                  00  0000   000          1235899999999999999999999999999999


Q ss_pred             CCCC
Q 015961          394 KIVP  397 (397)
Q Consensus       394 ~~~~  397 (397)
                      +.+|
T Consensus       343 ~~~~  346 (353)
T PLN02896        343 GFLP  346 (353)
T ss_pred             CCCC
Confidence            8765

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.98  E-value=9.7e-31  Score=239.50  Aligned_cols=250  Identities=21%  Similarity=0.238  Sum_probs=172.3

Q ss_pred             EEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961           30 LIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        30 LVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~  103 (397)
                      |||||+||||++|+++|++     +|  ++|+++++.+....    ......+++++|++|++++.++++++|.|+|+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~-----~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLE-----RGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHH-----CCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence            7999999999999999999     77  78999998765432    1122334999999999999999999999999988


Q ss_pred             ecccCC-CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          104 VTWTNR-STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       104 ~~~~~~-~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      ...... .+++.++++|+.||+|++++|++.  ++++++++||..++...  ..+.   .-...+|+.|..+.....|+.
T Consensus        76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~--~~~~---~~~~~dE~~~~~~~~~~~Y~~  148 (280)
T PF01073_consen   76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDN--YKGD---PIINGDEDTPYPSSPLDPYAE  148 (280)
T ss_pred             cccccCcccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEec--cCCC---CcccCCcCCcccccccCchHH
Confidence            654433 367789999999999999999986  49999999977665431  0110   011235555543333344776


Q ss_pred             HHHHHHHHh---cC------CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccH
Q 015961          183 EDILFEEVE---KK------EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDA  253 (397)
Q Consensus       183 e~~l~~~~~---~~------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da  253 (397)
                      +|.++|...   ..      ..+.+++|||+.|||++...........      .+ .+......|.+.....++   ++
T Consensus       149 SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~------~~-~g~~~~~~g~~~~~~~~v---yV  218 (280)
T PF01073_consen  149 SKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM------VR-SGLFLFQIGDGNNLFDFV---YV  218 (280)
T ss_pred             HHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHH------HH-hcccceeecCCCceECcE---eH
Confidence            554444321   12      2399999999999995433222222111      11 233334455555444444   44


Q ss_pred             HHHHHHHHHHhc---C----CCCCCCceeccCCCeee-hHHHHHHHHHHhCCCCCC
Q 015961          254 DLIAEHQIWAAV---D----PYAKNEAFNCNNGDVFK-WKHLWKVLAEQFGIEDYG  301 (397)
Q Consensus       254 ~~la~~~~~~~~---~----~~~~g~~yni~~~~~~s-~~el~~~i~~~~g~~~~~  301 (397)
                      .++|.+++.++.   .    ....|++|+|+++++++ +.|++..+.+.+|.+.+.
T Consensus       219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             HHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence            444666665543   1    34679999999999998 999999999999988654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.98  E-value=1.6e-30  Score=224.92  Aligned_cols=291  Identities=19%  Similarity=0.200  Sum_probs=204.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC------CCCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP------NWNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~------~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +...++|+||||.||||||||+.|..     +||+|++++..-..      .+...++++.+.-|+..+     .+..+|
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~-----egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD   93 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMT-----EGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVD   93 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHh-----cCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhh
Confidence            44558999999999999999999998     89999999974321      133446777777777554     678889


Q ss_pred             CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC-
Q 015961           97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL-  173 (397)
Q Consensus        97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~-  173 (397)
                      .|+|+|+.+....  .+|...+.+|+.++.+++..|++.+   .++++.||.       ++||.  +...|..|+.... 
T Consensus        94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aSTs-------eVYgd--p~~hpq~e~ywg~v  161 (350)
T KOG1429|consen   94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTS-------EVYGD--PLVHPQVETYWGNV  161 (350)
T ss_pred             hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEeecc-------cccCC--cccCCCcccccccc
Confidence            9999998766543  2788889999999999999999865   556655543       46665  2355655554322 


Q ss_pred             -CC-CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961          174 -DA-PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  246 (397)
Q Consensus       174 -~~-~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  246 (397)
                       |. +...|..     |.++-.|. ++.|+.+.|.|+.+.|||...  ++-...++.|.. ..-.+.|+...|++.|.++
T Consensus       162 npigpr~cydegKr~aE~L~~~y~-k~~giE~rIaRifNtyGPrm~--~~dgrvvsnf~~-q~lr~epltv~g~G~qtRS  237 (350)
T KOG1429|consen  162 NPIGPRSCYDEGKRVAETLCYAYH-KQEGIEVRIARIFNTYGPRMH--MDDGRVVSNFIA-QALRGEPLTVYGDGKQTRS  237 (350)
T ss_pred             CcCCchhhhhHHHHHHHHHHHHhh-cccCcEEEEEeeecccCCccc--cCCChhhHHHHH-HHhcCCCeEEEcCCcceEE
Confidence             21 2233654     44444444 788999999999999995322  211122222221 1112678888999999999


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCC-CCchhhcCCCCccccCHHHHhccc
Q 015961          247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG-LSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      |.++.|.   .+.++.+..++.  .+.+||++++-+|+.||++++.+..|-.... +..                     
T Consensus       238 F~yvsD~---Vegll~Lm~s~~--~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~---------------------  291 (350)
T KOG1429|consen  238 FQYVSDL---VEGLLRLMESDY--RGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVE---------------------  291 (350)
T ss_pred             EEeHHHH---HHHHHHHhcCCC--cCCcccCCccceeHHHHHHHHHHHcCCCcceeecC---------------------
Confidence            9998887   566666554433  3449999999999999999999988543221 100                     


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                                -+-+. +                ..+..|++||++ |||.|..+++|+|..++.|+|+
T Consensus       292 ----------~~~Dd-p----------------~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~  332 (350)
T KOG1429|consen  292 ----------NGPDD-P----------------RKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE  332 (350)
T ss_pred             ----------CCCCC-c----------------cccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence                      00000 0                033479999997 6999999999999999999975

>PLN00016 RNA-binding protein; Provisional

Probab=99.97  E-value=8.9e-31  Score=251.44  Aligned_cols=294  Identities=18%  Similarity=0.138  Sum_probs=195.7

Q ss_pred             CccCCCCCEEEEE----cCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceEEEccCC
Q 015961           20 EPARSYQSVALIV----GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------------NADHLVEYVQCDVS   83 (397)
Q Consensus        20 ~~~~~~~~~ILVt----GatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------------~~~~~v~~~~~Dl~   83 (397)
                      ..+..|+++||||    |||||||++|+++|++     +||+|++++|+.....            ....+++++.+|+.
T Consensus        46 ~~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~  120 (378)
T PLN00016         46 AAAAVEKKKVLIVNTNSGGHAFIGFYLAKELVK-----AGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPA  120 (378)
T ss_pred             hhcccccceEEEEeccCCCceeEhHHHHHHHHH-----CCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHH
Confidence            3344566899999    9999999999999999     8999999999764310            01235889999997


Q ss_pred             CHHHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           84 DPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        84 d~~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                      |.+++. ...++|.|+|+++              .++.++++++++|++.+  +++|+++||..+|+..         ..
T Consensus       121 d~~~~~-~~~~~d~Vi~~~~--------------~~~~~~~~ll~aa~~~g--vkr~V~~SS~~vyg~~---------~~  174 (378)
T PLN00016        121 DVKSKV-AGAGFDVVYDNNG--------------KDLDEVEPVADWAKSPG--LKQFLFCSSAGVYKKS---------DE  174 (378)
T ss_pred             HHHhhh-ccCCccEEEeCCC--------------CCHHHHHHHHHHHHHcC--CCEEEEEccHhhcCCC---------CC
Confidence            733322 2246788888732              12457889999999764  8899998876655421         13


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  243 (397)
                      .|..|+.+..|.. .....|+++     ++.+++++++||+++||+  +........+.  ..+.  .+.++.++|++.+
T Consensus       175 ~p~~E~~~~~p~~-sK~~~E~~l-----~~~~l~~~ilRp~~vyG~--~~~~~~~~~~~--~~~~--~~~~i~~~g~g~~  242 (378)
T PLN00016        175 PPHVEGDAVKPKA-GHLEVEAYL-----QKLGVNWTSFRPQYIYGP--GNNKDCEEWFF--DRLV--RGRPVPIPGSGIQ  242 (378)
T ss_pred             CCCCCCCcCCCcc-hHHHHHHHH-----HHcCCCeEEEeceeEECC--CCCCchHHHHH--HHHH--cCCceeecCCCCe
Confidence            4556666654432 222234433     456899999999999994  32222211111  1112  2556667777766


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhc
Q 015961          244 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  323 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (397)
                      ...++|+.|   +|.+++.++.++...+++||+++++.+|+.|+++.+++.+|.+.....            .+...+  
T Consensus       243 ~~~~i~v~D---va~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~------------~~~~~~--  305 (378)
T PLN00016        243 LTQLGHVKD---LASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVH------------YDPKAV--  305 (378)
T ss_pred             eeceecHHH---HHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceee------------cCcccc--
Confidence            655655544   577877777666566799999999999999999999999997642210            010000  


Q ss_pred             cchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961          324 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~~  396 (397)
                      .           .+... .      +.     +...+..+|++|+++ |||+|+++++|+|+++++||++.|.+
T Consensus       306 ~-----------~~~~~-~------~p-----~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~  356 (378)
T PLN00016        306 G-----------FGAKK-A------FP-----FRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD  356 (378)
T ss_pred             C-----------ccccc-c------cc-----ccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence            0           00000 0      00     000134579999986 69999999999999999999998865

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.97  E-value=3.1e-30  Score=241.99  Aligned_cols=291  Identities=11%  Similarity=0.080  Sum_probs=188.4

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc----cCCCeeEEEE
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTDVTHIFY  103 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~----~~~~V~h~a~  103 (397)
                      |||||||||||++|+++|++     .|+ +|++++|..............+.+|+.+.+.++.+..    ++|.|+|+|+
T Consensus         1 ilItGatG~iG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~   75 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNE-----RGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA   75 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHH-----cCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence            69999999999999999998     787 7888887543221110112356788888877766553    6888999998


Q ss_pred             ecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC-CCCCCcchhH
Q 015961          104 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-LDAPNFYYTL  182 (397)
Q Consensus       104 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~-~~~~~~~y~~  182 (397)
                      .......++...+++|+.++.+++++|++.+  + +++++||..+|+       ..   ..+.+|+++. .|..  .|+.
T Consensus        76 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~-~~v~~SS~~vy~-------~~---~~~~~e~~~~~~p~~--~Y~~  140 (314)
T TIGR02197        76 CSDTTETDGEYMMENNYQYSKRLLDWCAEKG--I-PFIYASSAATYG-------DG---EAGFREGRELERPLN--VYGY  140 (314)
T ss_pred             ccCccccchHHHHHHHHHHHHHHHHHHHHhC--C-cEEEEccHHhcC-------CC---CCCcccccCcCCCCC--HHHH
Confidence            6443344677788999999999999998864  3 578787665553       21   2345555543 2333  3665


Q ss_pred             -----HHHHHHHHhc-CCCeeEEEEcCCceeeccCCCcc---hhHHHHHHHHHHhhhcCCCceec------CCcccccee
Q 015961          183 -----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIPLRFP------GTKAAWECY  247 (397)
Q Consensus       183 -----e~~l~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~------g~~~~~~~~  247 (397)
                           |+++.++..+ ..+++++++||+.|||+......   ++...+.  ..+.  .+.++...      +++.+.+++
T Consensus       141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~g~~~~~~  216 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLF--NQIK--AGGNVKLFKSSEGFKDGEQLRDF  216 (314)
T ss_pred             HHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHH--HHHh--cCCCeEEecCccccCCCCceeee
Confidence                 4444443212 34579999999999995432111   1111111  1111  23333322      345555666


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  327 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (397)
                      +|+.|+   +++++.++..  ..+++||+++++++|++|+++.+.+.+|.+.....          .+.+  .       
T Consensus       217 i~v~D~---a~~i~~~~~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~--~-------  272 (314)
T TIGR02197       217 VYVKDV---VDVNLWLLEN--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEY----------IPMP--E-------  272 (314)
T ss_pred             EEHHHH---HHHHHHHHhc--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCccee----------ccCc--c-------
Confidence            666665   7777766654  45679999999999999999999999997532100          0000  0       


Q ss_pred             HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHh
Q 015961          328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  391 (397)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~  391 (397)
                                   .....   +        .....+|++|+++ +||+|+++++|+++++++|++
T Consensus       273 -------------~~~~~---~--------~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       273 -------------ALRGK---Y--------QYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             -------------ccccc---c--------ccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence                         00000   0        0023479999987 499999999999999999986

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.97  E-value=5.2e-30  Score=237.36  Aligned_cols=280  Identities=16%  Similarity=0.147  Sum_probs=192.0

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC--CCeeEEEEec
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYVT  105 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V~h~a~~~  105 (397)
                      +|||||||||||++|+++|++     +|++|++++|.              .+|+.|.+++.++++++  |.|+|+++..
T Consensus         1 kilv~G~tG~iG~~l~~~l~~-----~g~~v~~~~r~--------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~   61 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSP-----EGRVVVALTSS--------------QLDLTDPEALERLLRAIRPDAVVNTAAYT   61 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHh-----cCCEEEEeCCc--------------ccCCCCHHHHHHHHHhCCCCEEEECCccc
Confidence            589999999999999999998     89999999985              57999999999999876  7799998754


Q ss_pred             ccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHH
Q 015961          106 WTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE  183 (397)
Q Consensus       106 ~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e  183 (397)
                      ....  ..+...+++|+.++.+++++|++.+  . +++++||..+|+..         ...+++|+++..|..  .|+..
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~v~~Ss~~vy~~~---------~~~~~~E~~~~~~~~--~Y~~~  127 (287)
T TIGR01214        62 DVDGAESDPEKAFAVNALAPQNLARAAARHG--A-RLVHISTDYVFDGE---------GKRPYREDDATNPLN--VYGQS  127 (287)
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEeeeeeecCC---------CCCCCCCCCCCCCcc--hhhHH
Confidence            3221  2466788999999999999998754  2 67878766555321         245778888765543  48877


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 015961          184 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA  263 (397)
Q Consensus       184 ~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~  263 (397)
                      |...|...+..+++++++||+.|||+.  ...++...+...  +.  .+.++...++  ++..++   +++++|.+++.+
T Consensus       128 K~~~E~~~~~~~~~~~ilR~~~v~G~~--~~~~~~~~~~~~--~~--~~~~~~~~~~--~~~~~v---~v~Dva~a~~~~  196 (287)
T TIGR01214       128 KLAGEQAIRAAGPNALIVRTSWLYGGG--GGRNFVRTMLRL--AG--RGEELRVVDD--QIGSPT---YAKDLARVIAAL  196 (287)
T ss_pred             HHHHHHHHHHhCCCeEEEEeeecccCC--CCCCHHHHHHHH--hh--cCCCceEecC--CCcCCc---CHHHHHHHHHHH
Confidence            777665445567899999999999954  223333222111  11  1334444443  233444   445557787777


Q ss_pred             hcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccc
Q 015961          264 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL  343 (397)
Q Consensus       264 ~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (397)
                      +..+...+++||+++++.+|+.|+++.+++.+|.+....+.            +.   +....      ...+.  . +.
T Consensus       197 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~------------~~---~~~~~------~~~~~--~-~~  252 (287)
T TIGR01214       197 LQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHP------------QE---VKPIS------SKEYP--R-PA  252 (287)
T ss_pred             HhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccC------------ce---eEeec------HHHcC--C-CC
Confidence            76554568899999999999999999999999976432211            00   00000      00000  0 00


Q ss_pred             cccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHH
Q 015961          344 DEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWID  388 (397)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~  388 (397)
                      ..            .....+|++|+|+ +|| +.++++++++++++
T Consensus       253 ~~------------~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~  285 (287)
T TIGR01214       253 RR------------PAYSVLDNTKLVKTLGT-PLPHWREALRAYLQ  285 (287)
T ss_pred             CC------------CCccccchHHHHHHcCC-CCccHHHHHHHHHh
Confidence            00            0134589999997 599 56899999998875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=1.2e-29  Score=233.62  Aligned_cols=327  Identities=16%  Similarity=0.125  Sum_probs=212.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-CCC------CCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-NWN------ADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~~~------~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      +.++|||||+||+|.||+++|++..   ...+|++++..+.. .+.      ....++++++|+.|...+..+++++ .|
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~---~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENE---LKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcc---cccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence            4689999999999999999999832   13789999987642 211      1467889999999999999999999 88


Q ss_pred             eEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  176 (397)
Q Consensus        99 ~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~  176 (397)
                      +|+|+......  .+++..+++|+.||+|++++|++.+  +++++++||..+......        ....+|+.|.....
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~--v~~lIYtSs~~Vvf~g~~--------~~n~~E~~p~p~~~  149 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG--VKRLIYTSSAYVVFGGEP--------IINGDESLPYPLKH  149 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhC--CCEEEEecCceEEeCCee--------cccCCCCCCCcccc
Confidence            88877533322  2578889999999999999999875  899999987665532211        12234554432211


Q ss_pred             CcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce---ee
Q 015961          177 NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC---YS  248 (397)
Q Consensus       177 ~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~---~~  248 (397)
                      ...|+.     |+++.++. ...++..++|||..|||++......   .+...   .+ .+..+...|....+.+   ..
T Consensus       150 ~d~Y~~sKa~aE~~Vl~an-~~~~l~T~aLR~~~IYGpgd~~~~~---~i~~~---~~-~g~~~f~~g~~~~~~~~~~~~  221 (361)
T KOG1430|consen  150 IDPYGESKALAEKLVLEAN-GSDDLYTCALRPPGIYGPGDKRLLP---KIVEA---LK-NGGFLFKIGDGENLNDFTYGE  221 (361)
T ss_pred             ccccchHHHHHHHHHHHhc-CCCCeeEEEEccccccCCCCccccH---HHHHH---HH-ccCceEEeeccccccceEEec
Confidence            224665     44444432 2345999999999999944332222   22111   12 2333233444433333   33


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHH
Q 015961          249 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  328 (397)
Q Consensus       249 ~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (397)
                      .++.+..+|...+.. ..+...|+.|+|+++.++...+++..+.+.+|...+....         .|..+..+++-..+.
T Consensus       222 Nva~ahilA~~aL~~-~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~---------~p~~l~~~~~~l~e~  291 (361)
T KOG1430|consen  222 NVAWAHILAARALLD-KSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIK---------LPLFLSYFLAYLLEI  291 (361)
T ss_pred             hhHHHHHHHHHHHHh-cCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceee---------cchHHHHHHHHHHHH
Confidence            344455444433321 4567789999999999988778888999999987662111         456666666654444


Q ss_pred             HHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          329 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      -.++...  . ...+..      ....+......+|.+||+. |||.|..+++|++.+++.|+..+
T Consensus       292 ~~~~l~p--~-~p~lt~------~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~  348 (361)
T KOG1430|consen  292 VYFLLRP--Y-QPILTR------FRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASE  348 (361)
T ss_pred             HHHhccC--C-CCCcCh------hheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence            3333221  1 111111      0011111256789999985 79999999999999999988654

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=2.5e-29  Score=222.86  Aligned_cols=301  Identities=17%  Similarity=0.146  Sum_probs=211.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHcc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      +.++||||||+||||+|.+-+|++     +|++|++++.-....          ..+..+|.++++|+.|.+.|++.++.
T Consensus         1 ~~~~VLVtGgaGyiGsht~l~L~~-----~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~   75 (343)
T KOG1371|consen    1 GGKHVLVTGGAGYIGSHTVLALLK-----RGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE   75 (343)
T ss_pred             CCcEEEEecCCcceehHHHHHHHh-----CCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh
Confidence            457999999999999999999999     899999999632211          11236899999999999999999976


Q ss_pred             --CCCeeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961           95 --LTDVTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus        95 --~~~V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                        .|.|+|+|+......+  +|..++..|+.||.|||++|++++  ++++++.||+.       +||.  +...|++|+.
T Consensus        76 ~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~--~~~~V~sssat-------vYG~--p~~ip~te~~  144 (343)
T KOG1371|consen   76 VKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN--VKALVFSSSAT-------VYGL--PTKVPITEED  144 (343)
T ss_pred             cCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC--CceEEEeccee-------eecC--cceeeccCcC
Confidence              5569999988776554  778889999999999999999975  88898877655       5553  2468999999


Q ss_pred             CCC-CCCCc---chhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCC---------cchhHHHHHHHHHHhhh-----cC
Q 015961          171 PRL-DAPNF---YYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKH-----EG  232 (397)
Q Consensus       171 p~~-~~~~~---~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~-----~~  232 (397)
                      |.. |.++|   .|..|+++..+. ...++.++.||..+++|..|..         ..++.. .....++-+.     .+
T Consensus       145 ~t~~p~~pyg~tK~~iE~i~~d~~-~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g  222 (343)
T KOG1371|consen  145 PTDQPTNPYGKTKKAIEEIIHDYN-KAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVG  222 (343)
T ss_pred             CCCCCCCcchhhhHHHHHHHHhhh-ccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeec
Confidence            877 65552   233477777665 5666999999999999943311         112221 1111111111     12


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCC
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGG  310 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  310 (397)
                      .+.... +++..+.++++.|   +|+..+.++....  ..-++||++++...++.+|+..+++..|.+.+...       
T Consensus       223 ~d~~t~-dgt~vrdyi~v~D---la~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~-------  291 (343)
T KOG1371|consen  223 RDYTTI-DGTIVRDYIHVLD---LADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKV-------  291 (343)
T ss_pred             Cccccc-CCCeeecceeeEe---hHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccc-------
Confidence            232221 2233344444444   4667666665433  23459999999999999999999999998755311       


Q ss_pred             CCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHH-HcCCCCccCCHHHHHHHHHH
Q 015961          311 GGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDK  389 (397)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~  389 (397)
                           +.                           + +..   |.    ..++.+.++++ ||||+|.++++|++++..+|
T Consensus       292 -----v~---------------------------~-R~g---dv----~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W  331 (343)
T KOG1371|consen  292 -----VP---------------------------R-RNG---DV----AFVYANPSKAQRELGWKAKYGLQEMLKDLWRW  331 (343)
T ss_pred             -----cC---------------------------C-CCC---Cc----eeeeeChHHHHHHhCCccccCHHHHHHHHHHH
Confidence                 00                           0 000   00    14567888886 68999999999999999999


Q ss_pred             HhcCC
Q 015961          390 VKGFK  394 (397)
Q Consensus       390 ~~~~~  394 (397)
                      +.+.-
T Consensus       332 ~~~np  336 (343)
T KOG1371|consen  332 QKQNP  336 (343)
T ss_pred             HhcCC
Confidence            98763

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.96  E-value=2.6e-28  Score=230.02  Aligned_cols=297  Identities=18%  Similarity=0.136  Sum_probs=196.3

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCC---CCCceEEEccCCCHHHHHHHHc--cCCCee
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNA---DHLVEYVQCDVSDPEETQAKLS--QLTDVT   99 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~---~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~   99 (397)
                      +|||||||||||++|+++|++     .|++|++++|.....   ...   ..+++++.+|+.+.+++.+++.  .+|.|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLE-----SGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHh-----CCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            589999999999999999998     899999887643221   110   1156788999999999988886  477899


Q ss_pred             EEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  177 (397)
Q Consensus       100 h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~  177 (397)
                      |+|+......  .++.+.++.|+.++.+++++|.+.+  +.+++++||..+|+..         ...+++|+++..|...
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~ss~~~~g~~---------~~~~~~e~~~~~~~~~  144 (328)
T TIGR01179        76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG--VKKFIFSSSAAVYGEP---------SSIPISEDSPLGPINP  144 (328)
T ss_pred             ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC--CCEEEEecchhhcCCC---------CCCCccccCCCCCCCc
Confidence            9987543221  2456778999999999999998753  6788888876555321         1346778877665444


Q ss_pred             cchhH-----HHHHHHHHhcC-CCeeEEEEcCCceeeccCCCcc----hhHHHHHHHH-HHhhhcCCCceecC------C
Q 015961          178 FYYTL-----EDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLM----NLVGALCVYA-AVCKHEGIPLRFPG------T  240 (397)
Q Consensus       178 ~~y~~-----e~~l~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~-~i~~~~~~~~~~~g------~  240 (397)
                        |+.     |.++..+. ++ .+++++++||+.+||+.+....    .....+..++ ....+...++...|      +
T Consensus       145 --y~~sK~~~e~~~~~~~-~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (328)
T TIGR01179       145 --YGRSKLMSERILRDLS-KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPD  221 (328)
T ss_pred             --hHHHHHHHHHHHHHHH-HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCC
Confidence              543     55555554 44 7899999999999996443210    0001111111 11111222332222      3


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCH
Q 015961          241 KAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL  318 (397)
Q Consensus       241 ~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  318 (397)
                      +.+.+.++++.|+   +++++.++..  ....+++||++++..+|++|+++.+++.+|.+......          +.  
T Consensus       222 g~~~~~~v~~~D~---a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~----------~~--  286 (328)
T TIGR01179       222 GTCVRDYIHVMDL---ADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELA----------PR--  286 (328)
T ss_pred             CceEEeeeeHHHH---HHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeC----------CC--
Confidence            3334455555555   6665555432  22457899999999999999999999999976432100          00  


Q ss_pred             HHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccC-CHHHHHHHHHHHhcC
Q 015961          319 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRN-SKNSFITWIDKVKGF  393 (397)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~-~~e~~~~~~~~~~~~  393 (397)
                                          ....               .....+|++|+++ +||+|.++ ++++++++++|++++
T Consensus       287 --------------------~~~~---------------~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       287 --------------------RPGD---------------PASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             --------------------CCcc---------------ccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence                                0000               0033469999986 69999998 999999999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=2.6e-28  Score=211.45  Aligned_cols=316  Identities=16%  Similarity=0.148  Sum_probs=214.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      |.|+.||||-||+-|++|++.|++     +||+|+++.|+....           ...++++.++.+|++|...+..+++
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLe-----kGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~   75 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLE-----KGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE   75 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHh-----cCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence            568999999999999999999999     899999999974321           1133458899999999999999999


Q ss_pred             cCCC--eeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           94 QLTD--VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        94 ~~~~--V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      .+.+  |+|+|+++++..+  .|....+++..||.+||+|+|..+++-.+|..       .|+++.||..  .+.|.+|+
T Consensus        76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQ-------AStSE~fG~v--~~~pq~E~  146 (345)
T COG1089          76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQ-------ASTSELYGLV--QEIPQKET  146 (345)
T ss_pred             hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEe-------cccHHhhcCc--ccCccccC
Confidence            8776  9999999887655  78888899999999999999987642233332       4667788875  47899999


Q ss_pred             CCCCCCCCcchhHHHHHHHHH----hcCCCeeEEEEcCCceeec-cCCCcchh-HHHHHHHHH-HhhhcCCCceecCCcc
Q 015961          170 MPRLDAPNFYYTLEDILFEEV----EKKEELSWSVHRPDTIFGF-SPYSLMNL-VGALCVYAA-VCKHEGIPLRFPGTKA  242 (397)
Q Consensus       170 ~p~~~~~~~~y~~e~~l~~~~----~~~~g~~~~ilRp~~v~G~-~~~~~~~~-~~~~~~~~~-i~~~~~~~~~~~g~~~  242 (397)
                      +|+.|.++  |+..|+.+-+.    .+.+|+-.+.=   ..|-. +|..+..| ...+...++ |..++.. ....|+.+
T Consensus       147 TPFyPrSP--YAvAKlYa~W~tvNYResYgl~AcnG---ILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~-~l~lGNld  220 (345)
T COG1089         147 TPFYPRSP--YAVAKLYAYWITVNYRESYGLFACNG---ILFNHESPLRGETFVTRKITRAVARIKLGLQD-KLYLGNLD  220 (345)
T ss_pred             CCCCCCCH--HHHHHHHHHheeeehHhhcCceeecc---eeecCCCCCCccceehHHHHHHHHHHHccccc-eEEecccc
Confidence            99999877  88877776543    24456544432   23332 24444455 344544443 4444333 36689888


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  322 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (397)
                      ..+++.+..|.   +++ +|++++... .+.|.|++|+..|++|++++..+..|....-...    +..+ .-.+     
T Consensus       221 AkRDWG~A~DY---Ve~-mwlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~----g~~e-~g~d-----  285 (345)
T COG1089         221 AKRDWGHAKDY---VEA-MWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGT----GVDE-KGVD-----  285 (345)
T ss_pred             ccccccchHHH---HHH-HHHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeec----cccc-cccc-----
Confidence            77766655554   555 455555443 6779999999999999999999999965321000    0000 0000     


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHH-HcCCCCccCCHHHHHHHHHHHh
Q 015961          323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDKVK  391 (397)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~~~  391 (397)
                                 .+.|-..-.++. +-+-.    ...+-.+.|.+||+ +|||+|.++++|.+++++++..
T Consensus       286 -----------a~~G~~~V~idp-~~fRP----aEV~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl  339 (345)
T COG1089         286 -----------AKTGKIIVEIDP-RYFRP----AEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADL  339 (345)
T ss_pred             -----------cccCceeEEECc-cccCc----hhhhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHH
Confidence                       000100001100 00000    01114567999998 5899999999999999998753

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=1.7e-28  Score=234.19  Aligned_cols=269  Identities=14%  Similarity=0.163  Sum_probs=174.3

Q ss_pred             cccccccccccccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CC-------C
Q 015961            4 WWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-------A   71 (397)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-------~   71 (397)
                      .|.+..+..+..-..+.....++|+||||||+||||++|+++|++     +|++|++++|+....     ..       .
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~k~VLVTGatGfIG~~lv~~L~~-----~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~  105 (367)
T PLN02686         31 GWRGSRGGGKEANAGDAGADAEARLVCVTGGVSFLGLAIVDRLLR-----HGYSVRIAVDTQEDKEKLREMEMFGEMGRS  105 (367)
T ss_pred             ccccccCccccccccccccCCCCCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhhcccccc
Confidence            444555555532233445566788999999999999999999999     899999988864221     00       0


Q ss_pred             CCCceEEEccCCCHHHHHHHHccCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCC--c
Q 015961           72 DHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT--K  147 (397)
Q Consensus        72 ~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~--~  147 (397)
                      ..++.++.+|++|.+++.+++.++|.|+|+++......  .......++|+.++.+++++|++. .++++++++||.  .
T Consensus       106 ~~~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~-~~v~r~V~~SS~~~~  184 (367)
T PLN02686        106 NDGIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT-ESVRKCVFTSSLLAC  184 (367)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc-CCccEEEEeccHHHh
Confidence            12578899999999999999999999999987643222  122456688999999999999874 247899988874  2


Q ss_pred             cccccccccCCCCCCCCCCCCCCC------CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcch
Q 015961          148 HYLGPFEAFGKIKPYDPPFTEDMP------RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN  216 (397)
Q Consensus       148 ~y~ss~~~~g~~~~~~~~~~E~~p------~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~  216 (397)
                      +|+..   ++.  ....+++|+.+      ..|.  ..|+.     |+++..+. +..|++++++||++|||++......
T Consensus       185 vyg~~---~~~--~~~~~i~E~~~~~~~~~~~p~--~~Y~~sK~~~E~~~~~~~-~~~gl~~v~lRp~~vyGp~~~~~~~  256 (367)
T PLN02686        185 VWRQN---YPH--DLPPVIDEESWSDESFCRDNK--LWYALGKLKAEKAAWRAA-RGKGLKLATICPALVTGPGFFRRNS  256 (367)
T ss_pred             ccccc---CCC--CCCcccCCCCCCChhhccccc--chHHHHHHHHHHHHHHHH-HhcCceEEEEcCCceECCCCCCCCC
Confidence            34310   110  00122445432      2222  22664     55555554 5679999999999999954221111


Q ss_pred             hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHH
Q 015961          217 LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQ  294 (397)
Q Consensus       217 ~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~  294 (397)
                        ..+.   ...+  +. +.+.|++.  ..++|   ++++|.+++.++..  ....+++| ++++..+|++|+++.+.+.
T Consensus       257 --~~~~---~~~~--g~-~~~~g~g~--~~~v~---V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~  322 (367)
T PLN02686        257 --TATI---AYLK--GA-QEMLADGL--LATAD---VERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQ  322 (367)
T ss_pred             --hhHH---HHhc--CC-CccCCCCC--cCeEE---HHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHH
Confidence              1111   1112  22 23334433  23444   44557777776653  23456778 7888999999999999999


Q ss_pred             hCCCCC
Q 015961          295 FGIEDY  300 (397)
Q Consensus       295 ~g~~~~  300 (397)
                      +|.+..
T Consensus       323 ~g~~~~  328 (367)
T PLN02686        323 IGLPIN  328 (367)
T ss_pred             cCCCCC
Confidence            987543

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.96  E-value=2.1e-28  Score=229.65  Aligned_cols=295  Identities=14%  Similarity=0.130  Sum_probs=188.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |+|||||||||||++|+++|++     +||+|++++|++... .....+++++.+|++|++++.++++++|.|+|+++  
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~-----~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~--   73 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALD-----EGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST--   73 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC--
Confidence            3799999999999999999998     899999999985432 11235799999999999999999999999999854  


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  185 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~  185 (397)
                       ....++....++|+.++.|++++|++.+  +++++++|+...+     .|+              .   ..  |...+.
T Consensus        74 -~~~~~~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~-----~~~--------------~---~~--~~~~K~  126 (317)
T CHL00194         74 -SRPSDLYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAE-----QYP--------------Y---IP--LMKLKS  126 (317)
T ss_pred             -CCCCCccchhhhhHHHHHHHHHHHHHcC--CCEEEEecccccc-----ccC--------------C---Ch--HHHHHH
Confidence             2223445677899999999999999864  7899987742110     111              0   11  333333


Q ss_pred             HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 015961          186 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  265 (397)
Q Consensus       186 l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~  265 (397)
                      ..+.+.++.+++++++||+.+|+.    ..   ..+.  ..+.  .+.++...+ +.+.+.++   +++++|++++.++.
T Consensus       127 ~~e~~l~~~~l~~tilRp~~~~~~----~~---~~~~--~~~~--~~~~~~~~~-~~~~~~~i---~v~Dva~~~~~~l~  191 (317)
T CHL00194        127 DIEQKLKKSGIPYTIFRLAGFFQG----LI---SQYA--IPIL--EKQPIWITN-ESTPISYI---DTQDAAKFCLKSLS  191 (317)
T ss_pred             HHHHHHHHcCCCeEEEeecHHhhh----hh---hhhh--hhhc--cCCceEecC-CCCccCcc---CHHHHHHHHHHHhc
Confidence            222222567899999999988862    11   0010  0011  133433333 33333444   45555888777776


Q ss_pred             CCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccc
Q 015961          266 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDE  345 (397)
Q Consensus       266 ~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (397)
                      .+...+++||+++++.+|++|+++.+.+.+|.+.....          .|..+..+..    .|..   .++..+ ....
T Consensus       192 ~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~----------vp~~~~~~~~----~~~~---~~~~~~-~~~~  253 (317)
T CHL00194        192 LPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISR----------VPLFLLKLLR----QITG---FFEWTW-NISD  253 (317)
T ss_pred             CccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEe----------CCHHHHHHHH----HHHh---hcccch-hhHH
Confidence            66667899999999999999999999999998643211          2222222221    1111   111100 0000


Q ss_pred             cccchhhhhhhcCcccccchhhHHH-cCCCC--ccCCHHHHHHHHHHH
Q 015961          346 VGAWWFVDLVLTGEAKLASMNKSKE-HGFSG--FRNSKNSFITWIDKV  390 (397)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p--~~~~~e~~~~~~~~~  390 (397)
                        ...+........+..++.+++++ +|+.|  ..++++.++++++..
T Consensus       254 --~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  299 (317)
T CHL00194        254 --RLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERI  299 (317)
T ss_pred             --HHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHH
Confidence              00111111111145567888886 59998  478999999887653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=2.9e-28  Score=226.13  Aligned_cols=236  Identities=16%  Similarity=0.124  Sum_probs=152.5

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecccC
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTN  108 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~~~  108 (397)
                      |||||||||||++|+++|++     +|++|++++|++.....  .. .....|+.. ..+...+.++|.|+|+|+.....
T Consensus         1 vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~--~~-~~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~   71 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTK-----DGHEVTILTRSPPAGAN--TK-WEGYKPWAP-LAESEALEGADAVINLAGEPIAD   71 (292)
T ss_pred             CEEEcccchhhHHHHHHHHH-----cCCEEEEEeCCCCCCCc--cc-ceeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence            69999999999999999998     89999999998654311  01 011122222 44556778899999998753321


Q ss_pred             --CC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh---
Q 015961          109 --RS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT---  181 (397)
Q Consensus       109 --~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~---  181 (397)
                        ..  .+...+++|+.++++++++|++.+.+..++++.|++.+|       |..  ...+++|+.+..+.+  ++.   
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~y-------g~~--~~~~~~E~~~~~~~~--~~~~~~  140 (292)
T TIGR01777        72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYY-------GTS--EDRVFTEEDSPAGDD--FLAELC  140 (292)
T ss_pred             ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEe-------CCC--CCCCcCcccCCCCCC--hHHHHH
Confidence              11  456678999999999999999875333456655544444       421  235677777543322  232   


Q ss_pred             --HHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961          182 --LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  259 (397)
Q Consensus       182 --~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  259 (397)
                        .|+.+.. . ++.+++++++||+.|||+..+    ....+....  ....+.+   .|++.+.++++++.|   +|++
T Consensus       141 ~~~e~~~~~-~-~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~--~~~~~~~---~g~~~~~~~~i~v~D---va~~  206 (292)
T TIGR01777       141 RDWEEAAQA-A-EDLGTRVVLLRTGIVLGPKGG----ALAKMLPPF--RLGLGGP---LGSGRQWFSWIHIED---LVQL  206 (292)
T ss_pred             HHHHHHhhh-c-hhcCCceEEEeeeeEECCCcc----hhHHHHHHH--hcCcccc---cCCCCcccccEeHHH---HHHH
Confidence              2333332 2 456899999999999995322    111111101  1111212   455665666665544   5777


Q ss_pred             HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCC
Q 015961          260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED  299 (397)
Q Consensus       260 ~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~  299 (397)
                      +..++..+. .+++||+++++.+|++|+++.+.+.+|.+.
T Consensus       207 i~~~l~~~~-~~g~~~~~~~~~~s~~di~~~i~~~~g~~~  245 (292)
T TIGR01777       207 ILFALENAS-ISGPVNATAPEPVRNKEFAKALARALHRPA  245 (292)
T ss_pred             HHHHhcCcc-cCCceEecCCCccCHHHHHHHHHHHhCCCC
Confidence            777776544 356899999999999999999999999754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK05865 hypothetical protein; Provisional

Probab=99.96  E-value=2.4e-27  Score=241.87  Aligned_cols=258  Identities=19%  Similarity=0.266  Sum_probs=178.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  106 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~  106 (397)
                      |+|||||||||||++|+++|++     +|++|++++|+.....  ..+++++.+|+.|.+++..+++++|.|+|+|+...
T Consensus         1 MkILVTGATGfIGs~La~~Ll~-----~G~~Vv~l~R~~~~~~--~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~   73 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLS-----QGHEVVGIARHRPDSW--PSSADFIAADIRDATAVESAMTGADVVAHCAWVRG   73 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCchhhc--ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCccc
Confidence            3799999999999999999998     8999999999753322  13688999999999999999999999999975321


Q ss_pred             cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHH
Q 015961          107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  186 (397)
Q Consensus       107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l  186 (397)
                             ..+++|+.++.+++++|++.+  +++++++||.                .               ....|+++
T Consensus        74 -------~~~~vNv~GT~nLLeAa~~~g--vkr~V~iSS~----------------~---------------K~aaE~ll  113 (854)
T PRK05865         74 -------RNDHINIDGTANVLKAMAETG--TGRIVFTSSG----------------H---------------QPRVEQML  113 (854)
T ss_pred             -------chHHHHHHHHHHHHHHHHHcC--CCeEEEECCc----------------H---------------HHHHHHHH
Confidence                   146899999999999998764  6788877631                0               13334444


Q ss_pred             HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 015961          187 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD  266 (397)
Q Consensus       187 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~  266 (397)
                           .+++++++++||++|||  ++. .++...+         ...++...|+..+.+.++|+.|+   |.+++.++..
T Consensus       114 -----~~~gl~~vILRp~~VYG--P~~-~~~i~~l---------l~~~v~~~G~~~~~~dfIhVdDV---A~Ai~~aL~~  173 (854)
T PRK05865        114 -----ADCGLEWVAVRCALIFG--RNV-DNWVQRL---------FALPVLPAGYADRVVQVVHSDDA---QRLLVRALLD  173 (854)
T ss_pred             -----HHcCCCEEEEEeceEeC--CCh-HHHHHHH---------hcCceeccCCCCceEeeeeHHHH---HHHHHHHHhC
Confidence                 34689999999999999  431 1111111         12232334444444456665554   7777766654


Q ss_pred             CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCccccccc
Q 015961          267 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEV  346 (397)
Q Consensus       267 ~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (397)
                      ....+++|||++++.+|++|+++.+.+...    ++.            ......+..               ...+.  
T Consensus       174 ~~~~ggvyNIgsg~~~Si~EIae~l~~~~~----~v~------------~~~~~~~~~---------------~~~~~--  220 (854)
T PRK05865        174 TVIDSGPVNLAAPGELTFRRIAAALGRPMV----PIG------------SPVLRRVTS---------------FAELE--  220 (854)
T ss_pred             CCcCCCeEEEECCCcccHHHHHHHHhhhhc----cCC------------chhhhhccc---------------hhhhh--
Confidence            444578999999999999999998876431    100            000000000               00000  


Q ss_pred             ccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          347 GAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       347 ~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                               .......+|++|+++ +||+|+++++|+|+++++||+.+
T Consensus       221 ---------~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        221 ---------LLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR  259 (854)
T ss_pred             ---------cccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence                     000133579999986 69999999999999999999864

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7e-26  Score=233.30  Aligned_cols=324  Identities=14%  Similarity=0.061  Sum_probs=196.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCH------HHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDP------EETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~------~~l~~~~~   93 (397)
                      ++|||||||||||++|+++|+++.   .|++|++++|++....       ....+++++.+|++|+      +.+..+ .
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~---~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRR---REATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcC---CCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            379999999999999999999311   6899999999643210       0114689999999984      345554 8


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL  173 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~  173 (397)
                      ++|.|+|+|+..... .++.+..++|+.++.+++++|++.+  +++++++||..+|+..          ..+.+|+....
T Consensus        77 ~~D~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~--~~~~v~~SS~~v~g~~----------~~~~~e~~~~~  143 (657)
T PRK07201         77 DIDHVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQ--AATFHHVSSIAVAGDY----------EGVFREDDFDE  143 (657)
T ss_pred             CCCEEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcC--CCeEEEEeccccccCc----------cCccccccchh
Confidence            899999998854332 3456678999999999999998863  6788888876655421          12233433211


Q ss_pred             -CCCCcchhHHHHHHHHHhc-CCCeeEEEEcCCceeeccCCCc-chhHH--HHHHHHHHhhhcCCCceecCCccccceee
Q 015961          174 -DAPNFYYTLEDILFEEVEK-KEELSWSVHRPDTIFGFSPYSL-MNLVG--ALCVYAAVCKHEGIPLRFPGTKAAWECYS  248 (397)
Q Consensus       174 -~~~~~~y~~e~~l~~~~~~-~~g~~~~ilRp~~v~G~~~~~~-~~~~~--~~~~~~~i~~~~~~~~~~~g~~~~~~~~~  248 (397)
                       ......|+..|...|...+ ..+++++++||+.|||+..... .+...  .+...+.........+...+.+.....  
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  221 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTN--  221 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeee--
Confidence             1112237766666554323 4689999999999999643211 11100  010111100111111222333333333  


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCC---CCCCchhhcCCCCccccCHHHHhccc
Q 015961          249 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED---YGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       249 ~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                       ..++++++.+++.++..+...+++||+++++.+|++|+++.+.+.+|.+.   +...          .|..+...+...
T Consensus       222 -~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----------~p~~~~~~~~~~  290 (657)
T PRK07201        222 -IVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGF----------LPGFVAAPLLAA  290 (657)
T ss_pred             -eeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCcccccccc----------CChHHHHHHhhh
Confidence             44555668887777766566789999999999999999999999999875   2211          122222222110


Q ss_pred             ---hHHHHH-HHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-c---CCCCccCCHHHHHHHHHHHhc
Q 015961          326 ---EGVWEE-IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-H---GFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       326 ---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-l---G~~p~~~~~e~~~~~~~~~~~  392 (397)
                         ...+.. +.+..++.+..+..           ......+|.+|+++ |   |+. ..++++.+...++++.+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~f~~~~~~~~L~~~~~~-~p~~~~~~~~~~~~~~~  353 (657)
T PRK07201        291 LGPVRRLRNAVATQLGIPPEVLDF-----------VNYPTTFDSRETRAALKGSGIE-VPRLASYAPRLWDYWER  353 (657)
T ss_pred             cchhhHHHHHHHHhcCCCHHHHHh-----------ccCCCeeccHHHHHHhccCCcC-CCChHHHHHHHHHHHHh
Confidence               011111 12233333322211           11145689999975 5   554 55678888888876644

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.95  E-value=4.4e-27  Score=216.64  Aligned_cols=276  Identities=17%  Similarity=0.160  Sum_probs=173.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV  104 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~~  104 (397)
                      ||||||||+|+||++|+++|.+     +|++|+++.|.              ..|++|.+.+.+.+..  .|.|+|+|+.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~-----~~~~v~~~~r~--------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~   61 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKE-----RGYEVIATSRS--------------DLDLTDPEAVAKLLEAFKPDVVINCAAY   61 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTT-----TSEEEEEESTT--------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred             CEEEEECCCCHHHHHHHHHHhh-----CCCEEEEeCch--------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence            4899999999999999999998     89999999775              6899999999888876  4569999876


Q ss_pred             cccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          105 TWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       105 ~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      +....  .+++..+++|+.++.+|+++|...+   .+++++||..+|.+.         ...|++|++++.|.  ..|+.
T Consensus        62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~---~~li~~STd~VFdG~---------~~~~y~E~d~~~P~--~~YG~  127 (286)
T PF04321_consen   62 TNVDACEKNPEEAYAINVDATKNLAEACKERG---ARLIHISTDYVFDGD---------KGGPYTEDDPPNPL--NVYGR  127 (286)
T ss_dssp             --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEGGGS-SS---------TSSSB-TTS----S--SHHHH
T ss_pred             ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC---CcEEEeeccEEEcCC---------cccccccCCCCCCC--CHHHH
Confidence            54332  2788899999999999999999865   467777877777543         25678999887665  34887


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961          183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  262 (397)
Q Consensus       183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~  262 (397)
                      .|...|...++..-+..|+|++++||..   ..++...+...+    ..+.++....+  +   +.....+.++|+.++.
T Consensus       128 ~K~~~E~~v~~~~~~~~IlR~~~~~g~~---~~~~~~~~~~~~----~~~~~i~~~~d--~---~~~p~~~~dlA~~i~~  195 (286)
T PF04321_consen  128 SKLEGEQAVRAACPNALILRTSWVYGPS---GRNFLRWLLRRL----RQGEPIKLFDD--Q---YRSPTYVDDLARVILE  195 (286)
T ss_dssp             HHHHHHHHHHHH-SSEEEEEE-SEESSS---SSSHHHHHHHHH----HCTSEEEEESS--C---EE--EEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCEEEEecceecccC---CCchhhhHHHHH----hcCCeeEeeCC--c---eeCCEEHHHHHHHHHH
Confidence            7766665433333489999999999952   234443332111    12444444432  2   3344455556777776


Q ss_pred             HhcCCC---CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCC
Q 015961          263 AAVDPY---AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  339 (397)
Q Consensus       263 ~~~~~~---~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (397)
                      ++....   ...++||+++++.+|+.|++..+++.+|.....+.+           .+..+               .+. 
T Consensus       196 l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~-----------~~~~~---------------~~~-  248 (286)
T PF04321_consen  196 LIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKP-----------VSSSE---------------FPR-  248 (286)
T ss_dssp             HHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEE-----------ESSTT---------------STT-
T ss_pred             HHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEe-----------ccccc---------------CCC-
Confidence            665422   236899999999999999999999999987633211           11000               000 


Q ss_pred             cccccccccchhhhhhhcCc-ccccchhhHHHc-CCCCccCCHHHHHHHHHHH
Q 015961          340 PTRLDEVGAWWFVDLVLTGE-AKLASMNKSKEH-GFSGFRNSKNSFITWIDKV  390 (397)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~l-G~~p~~~~~e~~~~~~~~~  390 (397)
                        .             ...+ +..+|++|++.+ |++ ..+.+++|+++++.|
T Consensus       249 --~-------------~~rp~~~~L~~~kl~~~~g~~-~~~~~~~l~~~~~~~  285 (286)
T PF04321_consen  249 --A-------------APRPRNTSLDCRKLKNLLGIK-PPPWREGLEELVKQY  285 (286)
T ss_dssp             --S-------------SGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred             --C-------------CCCCCcccccHHHHHHccCCC-CcCHHHHHHHHHHHh
Confidence              0             0111 567899999986 998 588999999998865

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=2.1e-25  Score=207.24  Aligned_cols=241  Identities=13%  Similarity=0.093  Sum_probs=160.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +++|||||||||||++++++|++     +||+|++++|+....        .. ...+++++.+|++|.+++.+++.+++
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~-----~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d   80 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLS-----RGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCS   80 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCC
Confidence            46899999999999999999999     899999999853211        10 12368899999999999999999999


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCC-CCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK-IKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~-~~~~~~~~~E~~p~~~~  175 (397)
                      .|+|+++.........++.+++|+.|+.+++++|.+.. .+++++++||...+.     ++. ......+++|+.+..+.
T Consensus        81 ~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~-----~~~~~~~~~~~~~E~~~~~~~  154 (297)
T PLN02583         81 GLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVI-----WRDDNISTQKDVDERSWSDQN  154 (297)
T ss_pred             EEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHhee-----cccccCCCCCCCCcccCCCHH
Confidence            99997643221112356789999999999999998752 367899888754431     221 11113456776543211


Q ss_pred             ----CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961          176 ----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  246 (397)
Q Consensus       176 ----~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  246 (397)
                          ....|+.     |+++.++. +..+++++++||++|||+.... .+   .+      .  .+....+++.   ...
T Consensus       155 ~~~~~~~~Y~~sK~~aE~~~~~~~-~~~gi~~v~lrp~~v~Gp~~~~-~~---~~------~--~~~~~~~~~~---~~~  218 (297)
T PLN02583        155 FCRKFKLWHALAKTLSEKTAWALA-MDRGVNMVSINAGLLMGPSLTQ-HN---PY------L--KGAAQMYENG---VLV  218 (297)
T ss_pred             HHhhcccHHHHHHHHHHHHHHHHH-HHhCCcEEEEcCCcccCCCCCC-ch---hh------h--cCCcccCccc---Ccc
Confidence                0113664     45554443 4568999999999999943211 11   11      0  1111111221   123


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCC
Q 015961          247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI  297 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~  297 (397)
                      ++   |++++|++++.++..+...+ .|+++++....+.++.+++.+.+..
T Consensus       219 ~v---~V~Dva~a~~~al~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        219 TV---DVNFLVDAHIRAFEDVSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             eE---EHHHHHHHHHHHhcCcccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence            44   45556888888887655544 6999886666778899999888763

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.94  E-value=1.7e-25  Score=210.37  Aligned_cols=266  Identities=16%  Similarity=0.151  Sum_probs=178.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ++|+||||||+||||++|+++|++     +|  ++|++++|+....     .....+++++.+|++|.+.+.+++.++|.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~-----~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLE-----NYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----hCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence            457999999999999999999998     54  7899999875321     11124688999999999999999999999


Q ss_pred             eeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        98 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      |+|+|+.....  ..++.+.+++|+.|+.+++++|++.+  +.+|+++||..                 +      ..|.
T Consensus        78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~--~~~iV~~SS~~-----------------~------~~p~  132 (324)
T TIGR03589        78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG--VKRVVALSTDK-----------------A------ANPI  132 (324)
T ss_pred             EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeCCC-----------------C------CCCC
Confidence            99998864332  22567889999999999999999754  66888776411                 0      0121


Q ss_pred             CCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC-CceecCCcccccee
Q 015961          176 PNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECY  247 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~  247 (397)
                      ..  |+.     |+++..+.  ....|++++++||++|||+  +.  +....+   ..... .+. ++++. ++.+.+.+
T Consensus       133 ~~--Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~--~~--~~i~~~---~~~~~-~~~~~~~i~-~~~~~r~~  201 (324)
T TIGR03589       133 NL--YGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS--RG--SVVPFF---KSLKE-EGVTELPIT-DPRMTRFW  201 (324)
T ss_pred             CH--HHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC--CC--CcHHHH---HHHHH-hCCCCeeeC-CCCceEee
Confidence            22  554     44443321  1457899999999999994  32  121111   11111 233 33332 44555667


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  327 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (397)
                      +++.|+   +++++.++.. ...+++|+ +++..+++.|+++.+.+..+......                         
T Consensus       202 i~v~D~---a~a~~~al~~-~~~~~~~~-~~~~~~sv~el~~~i~~~~~~~~~~~-------------------------  251 (324)
T TIGR03589       202 ITLEQG---VNFVLKSLER-MLGGEIFV-PKIPSMKITDLAEAMAPECPHKIVGI-------------------------  251 (324)
T ss_pred             EEHHHH---HHHHHHHHhh-CCCCCEEc-cCCCcEEHHHHHHHHHhhCCeeEeCC-------------------------
Confidence            766665   7777766654 33567784 66678999999999988654321110                         


Q ss_pred             HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHH
Q 015961          328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITW  386 (397)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~  386 (397)
                                 ++....              .....|++|+++ +||.|+++++++++++
T Consensus       252 -----------~~g~~~--------------~~~~~~~~~~~~~lg~~~~~~l~~~~~~~  286 (324)
T TIGR03589       252 -----------RPGEKL--------------HEVMITEDDARHTYELGDYYAILPSISFW  286 (324)
T ss_pred             -----------CCCchh--------------HhhhcChhhhhhhcCCCCeEEEccccccc
Confidence                       000000              023469999986 6999999999998744

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.94  E-value=6.7e-27  Score=210.09  Aligned_cols=223  Identities=24%  Similarity=0.311  Sum_probs=165.4

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--CCCCceEEEccCCCHHHHHHHHccC--CCeeEEEEe
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYV  104 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V~h~a~~  104 (397)
                      |||||||||||++|+++|++     +|++|+.+.|++.....  ...+++++.+|+.|.+.+.++++..  |.|+|+|+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLK-----KGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHH-----TTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHH-----cCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence            79999999999999999999     89999999998755311  0127899999999999999999887  889999764


Q ss_pred             ccc--CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          105 TWT--NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       105 ~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      ...  ...++.+.++.|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|+.+..|...  |+.
T Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~sS~~~y-------~~~--~~~~~~e~~~~~~~~~--Y~~  142 (236)
T PF01370_consen   76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAG--VKRFIFLSSASVY-------GDP--DGEPIDEDSPINPLSP--YGA  142 (236)
T ss_dssp             SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--TSEEEEEEEGGGG-------TSS--SSSSBETTSGCCHSSH--HHH
T ss_pred             cccccccccccccccccccccccccccccccc--ccccccccccccc-------ccc--cccccccccccccccc--ccc
Confidence            321  113567888999999999999999875  4888888865555       432  2567788887755444  553


Q ss_pred             -----HHHHHHHHhcCCCeeEEEEcCCceeecc-CCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 015961          183 -----EDILFEEVEKKEELSWSVHRPDTIFGFS-PYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  255 (397)
Q Consensus       183 -----e~~l~~~~~~~~g~~~~ilRp~~v~G~~-~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  255 (397)
                           |+++..+. +..+++++++||+.|||+. +.. ...+...+..    ....+.++.+++++.+.++++|+.|+  
T Consensus       143 ~K~~~e~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~v~D~--  215 (236)
T PF01370_consen  143 SKRAAEELLRDYA-KKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIR----QALKGKPIKIPGDGSQVRDFIHVDDL--  215 (236)
T ss_dssp             HHHHHHHHHHHHH-HHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHH----HHHTTSSEEEESTSSCEEEEEEHHHH--
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccccccchhhH----HhhcCCcccccCCCCCccceEEHHHH--
Confidence                 66666654 5568999999999999965 111 2222222211    11236677888888887777777665  


Q ss_pred             HHHHHHHHhcCCCCCCCceecc
Q 015961          256 IAEHQIWAAVDPYAKNEAFNCN  277 (397)
Q Consensus       256 la~~~~~~~~~~~~~g~~yni~  277 (397)
                       |+++++++.++...+++|||+
T Consensus       216 -a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  216 -AEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             -HHHHHHHHHHSCTTTEEEEES
T ss_pred             -HHHHHHHHhCCCCCCCEEEeC
Confidence             888888888777789999986

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.94  E-value=1.2e-25  Score=195.40  Aligned_cols=236  Identities=15%  Similarity=0.135  Sum_probs=167.7

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCC-CCCceEEEccCCCHHHHHHHHc-cCCCeeEEEEecc
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-DHLVEYVQCDVSDPEETQAKLS-QLTDVTHIFYVTW  106 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~-~~~~V~h~a~~~~  106 (397)
                      |+|||||||||++|+.+|.+     .||+|++++|++...... ...+.       ..+.+..... ++|.|+|+|+-.-
T Consensus         1 IliTGgTGlIG~~L~~~L~~-----~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I   68 (297)
T COG1090           1 ILITGGTGLIGRALTARLRK-----GGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPI   68 (297)
T ss_pred             CeEeccccchhHHHHHHHHh-----CCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCcc
Confidence            68999999999999999999     899999999998654211 11111       1122333344 6999999988543


Q ss_pred             cCC--C--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC--Ccch
Q 015961          107 TNR--S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP--NFYY  180 (397)
Q Consensus       107 ~~~--~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~--~~~y  180 (397)
                      ...  .  ..+..++..+..|+.|.++..+...+++.++..|.+.+|+.+         .+..++|+.|....-  ...+
T Consensus        69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~---------~~~~~tE~~~~g~~Fla~lc~  139 (297)
T COG1090          69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHS---------GDRVVTEESPPGDDFLAQLCQ  139 (297)
T ss_pred             ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC---------CceeeecCCCCCCChHHHHHH
Confidence            222  1  456678999999999999998776678888877777766543         266788886543210  1112


Q ss_pred             hHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 015961          181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  260 (397)
Q Consensus       181 ~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  260 (397)
                      .-|+....+  +..|.+++++|.+.|.|+..|....+...+      ..++|.+   .|+++||.+++|+.|.   ++++
T Consensus       140 ~WE~~a~~a--~~~gtRvvllRtGvVLs~~GGaL~~m~~~f------k~glGG~---~GsGrQ~~SWIhieD~---v~~I  205 (297)
T COG1090         140 DWEEEALQA--QQLGTRVVLLRTGVVLSPDGGALGKMLPLF------KLGLGGK---LGSGRQWFSWIHIEDL---VNAI  205 (297)
T ss_pred             HHHHHHhhh--hhcCceEEEEEEEEEecCCCcchhhhcchh------hhccCCc---cCCCCceeeeeeHHHH---HHHH
Confidence            225544443  466899999999999995444332322222      2234545   7899999988888776   7788


Q ss_pred             HHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961          261 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       261 ~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~  300 (397)
                      .++..++...| .||++++.+++.+++...+++.++++..
T Consensus       206 ~fll~~~~lsG-p~N~taP~PV~~~~F~~al~r~l~RP~~  244 (297)
T COG1090         206 LFLLENEQLSG-PFNLTAPNPVRNKEFAHALGRALHRPAI  244 (297)
T ss_pred             HHHHhCcCCCC-cccccCCCcCcHHHHHHHHHHHhCCCcc
Confidence            88887766655 6999999999999999999999997644

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=1.7e-24  Score=192.89  Aligned_cols=273  Identities=17%  Similarity=0.208  Sum_probs=197.2

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC--CCeeEEEEec
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYVT  105 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V~h~a~~~  105 (397)
                      +|||||++|++|+.|++.|..      +++|++++|..              +|++|++.+.+.+...  |.|+|+|+.+
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~~------~~~v~a~~~~~--------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt   61 (281)
T COG1091           2 KILITGANGQLGTELRRALPG------EFEVIATDRAE--------------LDITDPDAVLEVIRETRPDVVINAAAYT   61 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhCC------CceEEeccCcc--------------ccccChHHHHHHHHhhCCCEEEECcccc
Confidence            499999999999999999972      67999999862              8999999999999876  5699998866


Q ss_pred             ccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHH
Q 015961          106 WTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE  183 (397)
Q Consensus       106 ~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e  183 (397)
                      .+..  .+++..+.+|..|+.|+.++|++.+..   ++++||..+|-+.         ...|+.|++++.|..  +|+++
T Consensus        62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~---lVhiSTDyVFDG~---------~~~~Y~E~D~~~P~n--vYG~s  127 (281)
T COG1091          62 AVDKAESEPELAFAVNATGAENLARAAAEVGAR---LVHISTDYVFDGE---------KGGPYKETDTPNPLN--VYGRS  127 (281)
T ss_pred             ccccccCCHHHHHHhHHHHHHHHHHHHHHhCCe---EEEeecceEecCC---------CCCCCCCCCCCCChh--hhhHH
Confidence            5543  267889999999999999999998744   4555666666442         246889999877754  49999


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 015961          184 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA  263 (397)
Q Consensus       184 ~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~  263 (397)
                      |++.|...++.+-+.+|+|.+++||..+   .||...+...   .+ .+.++....+     .+.....+.++|.++..+
T Consensus       128 Kl~GE~~v~~~~~~~~I~Rtswv~g~~g---~nFv~tml~l---a~-~~~~l~vv~D-----q~gsPt~~~dlA~~i~~l  195 (281)
T COG1091         128 KLAGEEAVRAAGPRHLILRTSWVYGEYG---NNFVKTMLRL---AK-EGKELKVVDD-----QYGSPTYTEDLADAILEL  195 (281)
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeeecCCC---CCHHHHHHHH---hh-cCCceEEECC-----eeeCCccHHHHHHHHHHH
Confidence            9998877677778999999999999543   4555444221   11 2444443322     455667778888888776


Q ss_pred             hcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccc
Q 015961          264 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL  343 (397)
Q Consensus       264 ~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (397)
                      +.. ...+.+||+++...+||-|+++.|.+.+|.+.....           +.+..               +++.   +.
T Consensus       196 l~~-~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~-----------~~~~~---------------~~~~---~a  245 (281)
T COG1091         196 LEK-EKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIE-----------PIASA---------------EYPT---PA  245 (281)
T ss_pred             Hhc-cccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccc-----------ccccc---------------ccCc---cC
Confidence            654 334459999998889999999999999997653211           11110               1111   11


Q ss_pred             cccccchhhhhhhcCcccccchhhHHHc-CCCCccCCHHHHHHHHHH
Q 015961          344 DEVGAWWFVDLVLTGEAKLASMNKSKEH-GFSGFRNSKNSFITWIDK  389 (397)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~d~~k~~~l-G~~p~~~~~e~~~~~~~~  389 (397)
                      .+   +         .+..+|+.|+++. |++ ..+.+++++++++.
T Consensus       246 ~R---P---------~~S~L~~~k~~~~~g~~-~~~w~~~l~~~~~~  279 (281)
T COG1091         246 KR---P---------ANSSLDTKKLEKAFGLS-LPEWREALKALLDE  279 (281)
T ss_pred             CC---C---------cccccchHHHHHHhCCC-CccHHHHHHHHHhh
Confidence            11   0         0345799999876 776 67788888877764

>PLN02996 fatty acyl-CoA reductase

Probab=99.94  E-value=3.9e-25  Score=217.64  Aligned_cols=264  Identities=16%  Similarity=0.061  Sum_probs=169.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCC-CCCCCCcEEEEEeCCCCCC---------C-----C--------------CCCCc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN---------W-----N--------------ADHLV   75 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~-~~~~~g~~V~~l~R~~~~~---------~-----~--------------~~~~v   75 (397)
                      .+|+|||||||||||++|+++|++. +.+.   +|+++.|.....         .     +              ...++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~---~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv   86 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVK---KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV   86 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCC---EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence            4589999999999999999998863 3222   799999965321         0     0              01578


Q ss_pred             eEEEccCC-------CHHHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcc
Q 015961           76 EYVQCDVS-------DPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH  148 (397)
Q Consensus        76 ~~~~~Dl~-------d~~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~  148 (397)
                      +++.||++       +.+.+..+++++|.|+|+|+.... ..++....++|+.||.+++++|++. .++++++++||..+
T Consensus        87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vST~~v  164 (491)
T PLN02996         87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKC-VKVKMLLHVSTAYV  164 (491)
T ss_pred             EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeeeEE
Confidence            89999998       444567778889999999986543 2467888999999999999999874 24788999998888


Q ss_pred             ccccccccCCC-CCCCC--------CCC-------------------CC-----------CC--CCCCCCcchhHHHHHH
Q 015961          149 YLGPFEAFGKI-KPYDP--------PFT-------------------ED-----------MP--RLDAPNFYYTLEDILF  187 (397)
Q Consensus       149 y~ss~~~~g~~-~~~~~--------~~~-------------------E~-----------~p--~~~~~~~~y~~e~~l~  187 (397)
                      |+......... .+...        .+.                   ++           .+  ....++ .|+.+|.++
T Consensus       165 yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn-~Y~~TK~~a  243 (491)
T PLN02996        165 CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPN-TYVFTKAMG  243 (491)
T ss_pred             ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCC-chHhhHHHH
Confidence            86421110000 00000        000                   00           00  001122 377655555


Q ss_pred             HHHhc--CCCeeEEEEcCCceeeccCCC----cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 015961          188 EEVEK--KEELSWSVHRPDTIFGFSPYS----LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI  261 (397)
Q Consensus       188 ~~~~~--~~g~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~  261 (397)
                      |....  ..+++++|+||++|||+....    ..++...-...  +.-..|....++|++.+.++++++.|+   +.+++
T Consensus       244 E~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~--~~~~~g~~~~~~gdg~~~~D~v~Vddv---v~a~l  318 (491)
T PLN02996        244 EMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVI--VGYGKGKLTCFLADPNSVLDVIPADMV---VNAMI  318 (491)
T ss_pred             HHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHH--HHhccceEeEEecCCCeecceecccHH---HHHHH
Confidence            54422  247999999999999964221    11111100011  111234444677888766666665555   77777


Q ss_pred             HHhcCC--C-CCCCceeccCC--CeeehHHHHHHHHHHhCCCC
Q 015961          262 WAAVDP--Y-AKNEAFNCNNG--DVFKWKHLWKVLAEQFGIED  299 (397)
Q Consensus       262 ~~~~~~--~-~~g~~yni~~~--~~~s~~el~~~i~~~~g~~~  299 (397)
                      .++...  . ..+++||++++  .++|+.|+++.+.+.++..+
T Consensus       319 ~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        319 VAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             HHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            666542  1 24679999998  88999999999999887643

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=3.4e-24  Score=179.60  Aligned_cols=286  Identities=17%  Similarity=0.195  Sum_probs=198.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC--eeEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD--VTHIF  102 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~--V~h~a  102 (397)
                      ++|||||++|.+|+++++.+.+     +|.  +=..+.-             --.+||++.++.++.++...+  |+|+|
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~-----q~~~~e~wvf~~-------------skd~DLt~~a~t~~lF~~ekPthVIhlA   63 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQE-----QGFDDENWVFIG-------------SKDADLTNLADTRALFESEKPTHVIHLA   63 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHh-----cCCCCcceEEec-------------cccccccchHHHHHHHhccCCceeeehH
Confidence            6899999999999999999987     444  2111111             115899999999999988776  99998


Q ss_pred             EecccC---CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC----CCCCC
Q 015961          103 YVTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM----PRLDA  175 (397)
Q Consensus       103 ~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~----p~~~~  175 (397)
                      +..+.-   ...+.+++..|+.--.|++..|-+.+  ++++++.-|++.|.       .  ....|+.|+.    |+.| 
T Consensus        64 AmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g--v~K~vsclStCIfP-------d--kt~yPIdEtmvh~gpphp-  131 (315)
T KOG1431|consen   64 AMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG--VKKVVSCLSTCIFP-------D--KTSYPIDETMVHNGPPHP-  131 (315)
T ss_pred             hhhcchhhcCCCchHHHhhcceechhHHHHHHHhc--hhhhhhhcceeecC-------C--CCCCCCCHHHhccCCCCC-
Confidence            865432   23678889999999999999998875  66666555555442       2  1256788875    3333 


Q ss_pred             CCcchhHHHHH----HHHHhcCCCeeEEEEcCCceeeccCC-Ccc-hh-HHHHHHHHHHhhhcCC-CceecCCcccccee
Q 015961          176 PNFYYTLEDIL----FEEVEKKEELSWSVHRPDTIFGFSPY-SLM-NL-VGALCVYAAVCKHEGI-PLRFPGTKAAWECY  247 (397)
Q Consensus       176 ~~~~y~~e~~l----~~~~~~~~g~~~~ilRp~~v~G~~~~-~~~-~~-~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~  247 (397)
                      +++.|+..|.+    ..++..++|..++.+-|+++|||..+ ++. .. ...+...+...+..+. ++...|++...+.+
T Consensus       132 sN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqF  211 (315)
T KOG1431|consen  132 SNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQF  211 (315)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHH
Confidence            36667754422    22334678999999999999995433 222 22 2223222223333344 57778888888888


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCC--eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD--VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      ++..|   ||+.+++.+.+ -..-+-.+++.++  .+|++|+++.+.+.+|......                       
T Consensus       212 iys~D---LA~l~i~vlr~-Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~-----------------------  264 (315)
T KOG1431|consen  212 IYSDD---LADLFIWVLRE-YEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV-----------------------  264 (315)
T ss_pred             hhHhH---HHHHHHHHHHh-hcCccceEeccCccceeEHHHHHHHHHHHhCCCceEE-----------------------
Confidence            87666   48888888754 3334567888877  6999999999999999875431                       


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccC-CHHHHHHHHHHHhcC
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRN-SKNSFITWIDKVKGF  393 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~e~~~~~~~~~~~~  393 (397)
                         |+         .++- + ..          .+..+|++|++.+||.|+.+ +++++.++++||.++
T Consensus       265 ---~D---------ttK~-D-Gq----------~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  265 ---WD---------TTKS-D-GQ----------FKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLDN  309 (315)
T ss_pred             ---ee---------ccCC-C-CC----------cccccchHHHHHhCCCcccChHHHHHHHHHHHHHHh
Confidence               11         1110 0 00          14468999999999999998 999999999999753

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.92  E-value=1.2e-22  Score=194.53  Aligned_cols=323  Identities=18%  Similarity=0.138  Sum_probs=191.3

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC--------------CC--C-C-CCceEEEccCCCH--
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN--------------WN--A-D-HLVEYVQCDVSDP--   85 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~--------------~~--~-~-~~v~~~~~Dl~d~--   85 (397)
                      +|||||||||||++|+++|++     +|  ++|+|++|+....              ..  . . .+++++.+|++++  
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~-----~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   75 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLR-----RSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL   75 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHh-----CCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence            589999999999999999998     66  6799999975421              00  0 0 4789999999754  


Q ss_pred             ----HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC
Q 015961           86 ----EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        86 ----~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          +.+.....++|.|+|+|+.... ..+.....++|+.++.+++++|.+.+  +++++++||..+|+...        
T Consensus        76 gl~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~--~~~~v~iSS~~v~~~~~--------  144 (367)
T TIGR01746        76 GLSDAEWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGR--AKPLHYVSTISVLAAID--------  144 (367)
T ss_pred             CcCHHHHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCC--CceEEEEccccccCCcC--------
Confidence                4566677889999999875432 23456677899999999999998753  56788888766664310        


Q ss_pred             CCCCCCCCCCCCC---CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLD---APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~---~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                       ..+..|+.+..+   .....|+.     |+++.++.  ..|++++++||+.|+|+......+....+...+......+.
T Consensus       145 -~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~  221 (367)
T TIGR01746       145 -LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS--DRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA  221 (367)
T ss_pred             -CCCccccccccccccccCCChHHHHHHHHHHHHHHH--hcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC
Confidence             111233332211   11223665     44444432  34899999999999995322211111111111111111221


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCC--CCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYA--KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGG  311 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~--~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  311 (397)
                         ++.....   ..+..+++++|.+++.++..+..  .+++||++++..++++|+++.+.+ +|.+..           
T Consensus       222 ---~p~~~~~---~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~-----------  283 (367)
T TIGR01746       222 ---YPDSPEL---TEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK-----------  283 (367)
T ss_pred             ---CCCCCcc---ccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC-----------
Confidence               1222111   22344556668888777665443  278999999999999999999998 887543           


Q ss_pred             CccccCHHHHhccchHHHHHHHHHh-CCCcccccccccchhhh--hhhc-CcccccchhhHHH----cCCCCccCCHHHH
Q 015961          312 GTQRVKLAEFMKGKEGVWEEIVREN-QLQPTRLDEVGAWWFVD--LVLT-GEAKLASMNKSKE----HGFSGFRNSKNSF  383 (397)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~-~~~~~~d~~k~~~----lG~~p~~~~~e~~  383 (397)
                         .+++.+|+......    ..+. +....++.  .-|.+..  .... .....+++++.++    +|..+..-..+.+
T Consensus       284 ---~~~~~~w~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (367)
T TIGR01746       284 ---LVSFDEWLQRLEDS----DTAKRDPPRYPLL--PLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLL  354 (367)
T ss_pred             ---cCCHHHHHHHHHHh----hhcCCCcccccch--hhhhccCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHH
Confidence               24556666532110    0000 00000110  0111110  0000 0022456655532    4766555577889


Q ss_pred             HHHHHHHhcCCCC
Q 015961          384 ITWIDKVKGFKIV  396 (397)
Q Consensus       384 ~~~~~~~~~~~~~  396 (397)
                      +.++++++..|++
T Consensus       355 ~~~~~~~~~~~~~  367 (367)
T TIGR01746       355 HLYLQYLKEIGFL  367 (367)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999988764

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.92  E-value=9.1e-23  Score=189.30  Aligned_cols=224  Identities=14%  Similarity=0.045  Sum_probs=143.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~a  102 (397)
                      +.|+||||||+||||++|+++|++     +|++|+...                 +|+.|.+.+...+.  ++|.|+|+|
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~-----~g~~V~~~~-----------------~~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQE-----QGIDFHYGS-----------------GRLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHh-----CCCEEEEec-----------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence            447899999999999999999998     899987432                 33455555666665  578899999


Q ss_pred             EecccC-----CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC--CCCCCCCCCCCCCC
Q 015961          103 YVTWTN-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP--YDPPFTEDMPRLDA  175 (397)
Q Consensus       103 ~~~~~~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~--~~~~~~E~~p~~~~  175 (397)
                      +.+...     ..++.+.+++|+.|+.+|+++|++.+  +++++ .||..+|+.     +...+  ...+++|++++.+.
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g--v~~v~-~sS~~vy~~-----~~~~p~~~~~~~~Ee~~p~~~  137 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG--LVLTN-YATGCIFEY-----DDAHPLGSGIGFKEEDTPNFT  137 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCEEE-EecceEeCC-----CCCCCcccCCCCCcCCCCCCC
Confidence            865432     13678889999999999999999865  44444 444444421     11000  12346776654332


Q ss_pred             CCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 015961          176 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  255 (397)
Q Consensus       176 ~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  255 (397)
                       ...|+..|.+.|.+...+ -+..++|+..++|.......++...      +.+  +.++...+.     ++.++.|+  
T Consensus       138 -~s~Yg~sK~~~E~~~~~y-~~~~~lr~~~~~~~~~~~~~~fi~~------~~~--~~~~~~~~~-----s~~yv~D~--  200 (298)
T PLN02778        138 -GSFYSKTKAMVEELLKNY-ENVCTLRVRMPISSDLSNPRNFITK------ITR--YEKVVNIPN-----SMTILDEL--  200 (298)
T ss_pred             -CCchHHHHHHHHHHHHHh-hccEEeeecccCCcccccHHHHHHH------HHc--CCCeeEcCC-----CCEEHHHH--
Confidence             234887777766543332 2567889888888432221222211      111  333222221     34555444  


Q ss_pred             HHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCC
Q 015961          256 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  298 (397)
Q Consensus       256 la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~  298 (397)
                       +.+++.++.. +. +++||++++..+|+.|+++.+++.+|..
T Consensus       201 -v~al~~~l~~-~~-~g~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        201 -LPISIEMAKR-NL-TGIYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             -HHHHHHHHhC-CC-CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence             6666655543 22 4699999999999999999999999964

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.91  E-value=3.1e-23  Score=199.21  Aligned_cols=227  Identities=19%  Similarity=0.148  Sum_probs=158.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceEEEccCCCHHHHHHHHc-
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      ..+++|||||||||||++++++|++     +|++|++++|+.....         ...++++++.+|++|++++..+++ 
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~  132 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVR-----RGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFS  132 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHH
Confidence            3457999999999999999999998     8999999999753210         012478999999999999999888 


Q ss_pred             ---cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                         ++|.|+|+++.   ......+.+++|+.++.+++++|++.+  +++|+++|+..+|       +             
T Consensus       133 ~~~~~D~Vi~~aa~---~~~~~~~~~~vn~~~~~~ll~aa~~~g--v~r~V~iSS~~v~-------~-------------  187 (390)
T PLN02657        133 EGDPVDVVVSCLAS---RTGGVKDSWKIDYQATKNSLDAGREVG--AKHFVLLSAICVQ-------K-------------  187 (390)
T ss_pred             hCCCCcEEEECCcc---CCCCCccchhhHHHHHHHHHHHHHHcC--CCEEEEEeecccc-------C-------------
Confidence               47889987652   112223457889999999999998764  7788888754322       1             


Q ss_pred             CCCCCCCcchhH---HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961          171 PRLDAPNFYYTL---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  247 (397)
Q Consensus       171 p~~~~~~~~y~~---e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  247 (397)
                         |...+..+.   |+.+..   ...+++++|+||+.+||.-    ..+   +    ...+ .+.++.+.|++...+  
T Consensus       188 ---p~~~~~~sK~~~E~~l~~---~~~gl~~tIlRp~~~~~~~----~~~---~----~~~~-~g~~~~~~GdG~~~~--  247 (390)
T PLN02657        188 ---PLLEFQRAKLKFEAELQA---LDSDFTYSIVRPTAFFKSL----GGQ---V----EIVK-DGGPYVMFGDGKLCA--  247 (390)
T ss_pred             ---cchHHHHHHHHHHHHHHh---ccCCCCEEEEccHHHhccc----HHH---H----Hhhc-cCCceEEecCCcccc--
Confidence               111111222   333322   2478999999999999821    111   1    1111 256655667665322  


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCC-CeeehHHHHHHHHHHhCCCCC
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~-~~~s~~el~~~i~~~~g~~~~  300 (397)
                      ....++.++|..++.++.++...+++|||+++ +.+|++|+++.+.+.+|.+..
T Consensus       248 ~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~  301 (390)
T PLN02657        248 CKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK  301 (390)
T ss_pred             cCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence            12234455577777777666667899999986 589999999999999998643

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=4.1e-22  Score=197.68  Aligned_cols=259  Identities=12%  Similarity=0.063  Sum_probs=166.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCC-CCCCCCcEEEEEeCCCCCC---------CC-------------------CCCCce
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN---------WN-------------------ADHLVE   76 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~-~~~~~g~~V~~l~R~~~~~---------~~-------------------~~~~v~   76 (397)
                      +++|||||||||||++|+++|++. +.+   .+|++++|.....         +.                   ...++.
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v---~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDV---GKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCC---cEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            589999999999999999999962 222   2799999964321         00                   024688


Q ss_pred             EEEccCCCH------HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccc
Q 015961           77 YVQCDVSDP------EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYL  150 (397)
Q Consensus        77 ~~~~Dl~d~------~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~  150 (397)
                      ++.+|++++      +..+.+.+.+|.|+|+|+.... ..+++..+++|+.|+.+++++|++. .++++++++||+.+|+
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f-~~~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vSTayVyG  273 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF-DERYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVSTAYVNG  273 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc-ccCHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccCceeec
Confidence            999999987      3455666778999999986543 2467888999999999999999875 3477899999988886


Q ss_pred             ccccccCC-CCCCCC-----------------CCC------------CC--C---------C-------CCCCCCcchhH
Q 015961          151 GPFEAFGK-IKPYDP-----------------PFT------------ED--M---------P-------RLDAPNFYYTL  182 (397)
Q Consensus       151 ss~~~~g~-~~~~~~-----------------~~~------------E~--~---------p-------~~~~~~~~y~~  182 (397)
                      .....+-. ..+...                 +.+            +.  .         +       ..+.++ .|..
T Consensus       274 ~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN-tYt~  352 (605)
T PLN02503        274 QRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD-TYVF  352 (605)
T ss_pred             CCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC-hHHH
Confidence            53211111 110000                 000            00  0         0       011122 3776


Q ss_pred             HHHHHHHHhc--CCCeeEEEEcCCceeec----cCCCcch--hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 015961          183 EDILFEEVEK--KEELSWSVHRPDTIFGF----SPYSLMN--LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD  254 (397)
Q Consensus       183 e~~l~~~~~~--~~g~~~~ilRp~~v~G~----~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~  254 (397)
                      .|.++|....  ..++|++|+||+.|.+.    -||...+  ...++....    +.|.--.+++++.   ...|++.+|
T Consensus       353 TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~----g~G~lr~~~~~~~---~~~DiVPVD  425 (605)
T PLN02503        353 TKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYY----GKGQLTGFLADPN---GVLDVVPAD  425 (605)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhhe----eccceeEEEeCCC---eeEeEEeec
Confidence            6666665422  34699999999999542    2222222  222221111    1232223566665   556777777


Q ss_pred             HHHHHHHHHhcC-C---CCCCCceeccCC--CeeehHHHHHHHHHHhCC
Q 015961          255 LIAEHQIWAAVD-P---YAKNEAFNCNNG--DVFKWKHLWKVLAEQFGI  297 (397)
Q Consensus       255 ~la~~~~~~~~~-~---~~~g~~yni~~~--~~~s~~el~~~i~~~~g~  297 (397)
                      .++.+++.++.. .   ...+++||++++  .+++|+|+.+.+.+.+..
T Consensus       426 ~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        426 MVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            778888777321 1   234789999988  889999999999987764

>PRK12320 hypothetical protein; Provisional

Probab=99.87  E-value=1.4e-20  Score=188.72  Aligned_cols=201  Identities=18%  Similarity=0.188  Sum_probs=135.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  106 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~  106 (397)
                      |+|||||||||||++|+++|++     +||+|++++|.+...  ..++++++.+|++|+. +.+++.++|.|+|+|+.. 
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~-----~G~~Vi~ldr~~~~~--~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~-   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIA-----AGHTVSGIAQHPHDA--LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD-   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEeCChhhc--ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC-
Confidence            3799999999999999999998     899999999975432  2257889999999985 778888999999997632 


Q ss_pred             cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHH
Q 015961          107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  186 (397)
Q Consensus       107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l  186 (397)
                        ...   ...+|+.|+.|++++|++.+  + +++++||.         +|.    .             ..+...|.++
T Consensus        72 --~~~---~~~vNv~Gt~nLleAA~~~G--v-RiV~~SS~---------~G~----~-------------~~~~~aE~ll  117 (699)
T PRK12320         72 --TSA---PGGVGITGLAHVANAAARAG--A-RLLFVSQA---------AGR----P-------------ELYRQAETLV  117 (699)
T ss_pred             --ccc---hhhHHHHHHHHHHHHHHHcC--C-eEEEEECC---------CCC----C-------------ccccHHHHHH
Confidence              111   23589999999999998865  3 46666632         221    0             0011234443


Q ss_pred             HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhh-cCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 015961          187 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH-EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  265 (397)
Q Consensus       187 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~  265 (397)
                      .     .++++++++|++++||+  +........+..++  ... .+.++          .++|+   ++++.+++.++.
T Consensus       118 ~-----~~~~p~~ILR~~nVYGp--~~~~~~~r~I~~~l--~~~~~~~pI----------~vIyV---dDvv~alv~al~  175 (699)
T PRK12320        118 S-----TGWAPSLVIRIAPPVGR--QLDWMVCRTVATLL--RSKVSARPI----------RVLHL---DDLVRFLVLALN  175 (699)
T ss_pred             H-----hcCCCEEEEeCceecCC--CCcccHhHHHHHHH--HHHHcCCce----------EEEEH---HHHHHHHHHHHh
Confidence            3     34589999999999995  32111111111111  111 12232          23444   444677666654


Q ss_pred             CCCCCCCceeccCCCeeehHHHHHHHHHH
Q 015961          266 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQ  294 (397)
Q Consensus       266 ~~~~~g~~yni~~~~~~s~~el~~~i~~~  294 (397)
                      ..  .+++|||++++.+|++|+++.+...
T Consensus       176 ~~--~~GiyNIG~~~~~Si~el~~~i~~~  202 (699)
T PRK12320        176 TD--RNGVVDLATPDTTNVVTAWRLLRSV  202 (699)
T ss_pred             CC--CCCEEEEeCCCeeEHHHHHHHHHHh
Confidence            32  2359999999999999998888665

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.87  E-value=1.4e-20  Score=193.59  Aligned_cols=222  Identities=14%  Similarity=0.050  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~a  102 (397)
                      +.++||||||+||||++|+++|.+     +|++|..                 ..+|++|.+.+...+.  +.|.|+|+|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~-----~g~~v~~-----------------~~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEK-----QGIAYEY-----------------GKGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHh-----CCCeEEe-----------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence            346899999999999999999998     7888731                 1246788888877776  467799999


Q ss_pred             EecccC-----CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC--CCCCCCCCCCCCCCC
Q 015961          103 YVTWTN-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK--PYDPPFTEDMPRLDA  175 (397)
Q Consensus       103 ~~~~~~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~--~~~~~~~E~~p~~~~  175 (397)
                      +.+...     ..++.+.+++|+.|+.+|+++|++.+  +++ ++.||..+|+.     +...  ....|++|++++.|.
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g--~~~-v~~Ss~~v~~~-----~~~~~~~~~~p~~E~~~~~~~  508 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG--LLM-MNFATGCIFEY-----DAKHPEGSGIGFKEEDKPNFT  508 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC--CeE-EEEcccceecC-----CcccccccCCCCCcCCCCCCC
Confidence            865321     12678889999999999999999875  443 44455444421     1100  012467887755442


Q ss_pred             CCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 015961          176 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  255 (397)
Q Consensus       176 ~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  255 (397)
                       ...|+..|...|.+.+.+ -+..++|+.++||..+....|+...+      .+ ...++.++.      ...++.++  
T Consensus       509 -~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~------~~-~~~~~~vp~------~~~~~~~~--  571 (668)
T PLN02260        509 -GSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKI------SR-YNKVVNIPN------SMTVLDEL--  571 (668)
T ss_pred             -CChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHH------hc-cceeeccCC------CceehhhH--
Confidence             234887777766553333 36778888888975443444655444      11 122223332      12233222  


Q ss_pred             HHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhC
Q 015961          256 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG  296 (397)
Q Consensus       256 la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g  296 (397)
                       +.+++.++..  ..+++||+++++.+||.|+++.+.+.++
T Consensus       572 -~~~~~~l~~~--~~~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        572 -LPISIEMAKR--NLRGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             -HHHHHHHHHh--CCCceEEecCCCcCcHHHHHHHHHHhcC
Confidence             3333433332  3358999999999999999999999874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.86  E-value=6.7e-21  Score=176.20  Aligned_cols=211  Identities=15%  Similarity=0.116  Sum_probs=141.9

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH------cc-CCCeeE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL------SQ-LTDVTH  100 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~------~~-~~~V~h  100 (397)
                      +||||||||++|++++++|++     .|++|++++|++....  ..+++.+.+|+.|++++..++      .+ +|.|+|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~-----~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQA-----ASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHh-----CCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence            489999999999999999998     8999999999876432  257788899999999999998      56 777888


Q ss_pred             EEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961          101 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  180 (397)
Q Consensus       101 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y  180 (397)
                      ++..   ...        ....+.+++++|++.+  ++||+++|+...+      .+            .   + ..  .
T Consensus        74 ~~~~---~~~--------~~~~~~~~i~aa~~~g--v~~~V~~Ss~~~~------~~------------~---~-~~--~  116 (285)
T TIGR03649        74 VAPP---IPD--------LAPPMIKFIDFARSKG--VRRFVLLSASIIE------KG------------G---P-AM--G  116 (285)
T ss_pred             eCCC---CCC--------hhHHHHHHHHHHHHcC--CCEEEEeeccccC------CC------------C---c-hH--H
Confidence            7431   111        1234568999998864  8899988742111      00            0   0 00  1


Q ss_pred             hHHHHHHHHHhcC-CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961          181 TLEDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  259 (397)
Q Consensus       181 ~~e~~l~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  259 (397)
                      ..++    +. ++ .|++++++||+.+++.-.. .. ....+      . ..+ ++. .+.+.....+   .++.++|++
T Consensus       117 ~~~~----~l-~~~~gi~~tilRp~~f~~~~~~-~~-~~~~~------~-~~~-~~~-~~~g~~~~~~---v~~~Dva~~  177 (285)
T TIGR03649       117 QVHA----HL-DSLGGVEYTVLRPTWFMENFSE-EF-HVEAI------R-KEN-KIY-SATGDGKIPF---VSADDIARV  177 (285)
T ss_pred             HHHH----HH-HhccCCCEEEEeccHHhhhhcc-cc-ccccc------c-cCC-eEE-ecCCCCccCc---ccHHHHHHH
Confidence            1233    33 33 4899999999988862110 00 00001      1 112 222 2333333344   455555777


Q ss_pred             HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCC
Q 015961          260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG  301 (397)
Q Consensus       260 ~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~  301 (397)
                      +..++..+...++.||+++++.+|++|+++.+.+.+|++...
T Consensus       178 ~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~  219 (285)
T TIGR03649       178 AYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITH  219 (285)
T ss_pred             HHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEE
Confidence            777776666667889999999999999999999999987654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.86  E-value=2.3e-20  Score=177.80  Aligned_cols=229  Identities=18%  Similarity=0.142  Sum_probs=167.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      .+|+||||||+|.||+.|++++++.    +--+|+.++|+..+.         .....++.++-||+.|.+.+..++++ 
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~----~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKF----NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhc----CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence            4799999999999999999999984    122699999986432         11235788999999999999999999 


Q ss_pred             -CCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           95 -LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        95 -~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                       +|.|||.|+.-+++.  .+|.+.+++|+.||.|+++||.+.+  +++|+.+||.+.                       
T Consensus       325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~--V~~~V~iSTDKA-----------------------  379 (588)
T COG1086         325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG--VKKFVLISTDKA-----------------------  379 (588)
T ss_pred             CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC--CCEEEEEecCcc-----------------------
Confidence             888999998777654  3899999999999999999999864  999999885331                       


Q ss_pred             CCCCCCcchhH-----HHHHHHHHhcCC--CeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcccc
Q 015961          172 RLDAPNFYYTL-----EDILFEEVEKKE--ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAW  244 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  244 (397)
                      ..|...  |+.     |+.+..+..+..  +..++++|+|+|.|+ .|+...++...     |.+  |.|++.. +.+-.
T Consensus       380 V~PtNv--mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGS-rGSViPlFk~Q-----I~~--GgplTvT-dp~mt  448 (588)
T COG1086         380 VNPTNV--MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGS-RGSVIPLFKKQ-----IAE--GGPLTVT-DPDMT  448 (588)
T ss_pred             cCCchH--hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecC-CCCCHHHHHHH-----HHc--CCCcccc-CCCce
Confidence            123222  554     444444431123  489999999999994 23333222111     333  5665543 33445


Q ss_pred             ceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCC
Q 015961          245 ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI  297 (397)
Q Consensus       245 ~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~  297 (397)
                      +.+..+.+|..   .++.+... ...|++|-+--|+++++.|+++.+.+..|.
T Consensus       449 RyfMTI~EAv~---LVlqA~a~-~~gGeifvldMGepvkI~dLAk~mi~l~g~  497 (588)
T COG1086         449 RFFMTIPEAVQ---LVLQAGAI-AKGGEIFVLDMGEPVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             eEEEEHHHHHH---HHHHHHhh-cCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence            68888989844   44444332 567899999989999999999999999984

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.86  E-value=1e-21  Score=176.22  Aligned_cols=225  Identities=21%  Similarity=0.206  Sum_probs=143.9

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceE----EEccCCCHHHHHHHHc--
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEY----VQCDVSDPEETQAKLS--   93 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~----~~~Dl~d~~~l~~~~~--   93 (397)
                      ||||||+|.||+.|+++|++.    +-.+|++++|+....      .   ...+++++    +.+|+.|.+.+..+++  
T Consensus         1 VLVTGa~GSIGseL~rql~~~----~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRY----GPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCC----B-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred             CEEEccccHHHHHHHHHHHhc----CCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence            799999999999999999983    224799999985321      1   12234543    5899999999999999  


Q ss_pred             cCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      +.|.|||.|+.-+++  ..+|.+.+++|+.||+|++++|.+++  +++|+++||.+..                      
T Consensus        77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~--v~~~v~ISTDKAv----------------------  132 (293)
T PF02719_consen   77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG--VERFVFISTDKAV----------------------  132 (293)
T ss_dssp             T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT---SEEEEEEECGCS----------------------
T ss_pred             CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEccccccC----------------------
Confidence            677899999875553  34899999999999999999999874  8999999864422                      


Q ss_pred             CCCCCCcchhHHHHHHHHH----hcCC---CeeEEEEcCCceeeccCCCcchhHHHHHHHHH-HhhhcCCCceecCCccc
Q 015961          172 RLDAPNFYYTLEDILFEEV----EKKE---ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA-VCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       172 ~~~~~~~~y~~e~~l~~~~----~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~g~~~~  243 (397)
                       .|...  |+.+|.+.|..    ....   +..++++|+++|.|+. |+...      .|.. +.  .|.|+.... .+-
T Consensus       133 -~Ptnv--mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-GSVip------~F~~Qi~--~g~PlTvT~-p~m  199 (293)
T PF02719_consen  133 -NPTNV--MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-GSVIP------LFKKQIK--NGGPLTVTD-PDM  199 (293)
T ss_dssp             -S--SH--HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-TSCHH------HHHHHHH--TTSSEEECE-TT-
T ss_pred             -CCCcH--HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-CcHHH------HHHHHHH--cCCcceeCC-CCc
Confidence             12222  66544444432    1222   4799999999999942 33322      1221 23  366765433 344


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCC
Q 015961          244 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  298 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~  298 (397)
                      .+.+..+.+|..|+   +.++.. ...|++|.+--|+++++.|+++.+.+..|..
T Consensus       200 tRffmti~EAv~Lv---l~a~~~-~~~geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  200 TRFFMTIEEAVQLV---LQAAAL-AKGGEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             EEEEE-HHHHHHHH---HHHHHH---TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             EEEEecHHHHHHHH---HHHHhh-CCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            56888888884443   333322 3468899988899999999999999999964

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.85  E-value=4.3e-20  Score=157.05  Aligned_cols=309  Identities=17%  Similarity=0.158  Sum_probs=192.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC------CCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN------ADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~------~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      |-.||||-||.-|++|++.|++     +||+|+++.|+++.-       +.      .........+|++|...+...+.
T Consensus        29 kvALITGItGQDGSYLaEfLL~-----KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~  103 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLS-----KGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS  103 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHh-----CCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence            4679999999999999999999     899999999976431       11      11345678899999999999988


Q ss_pred             cCCC--eeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           94 QLTD--VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        94 ~~~~--V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      -+.+  |+|+|+.+++..+  -++...++...||..||+|++..+  .+++++-        .|+++.||..  .+.|.+
T Consensus       104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQ--------AstSElyGkv--~e~PQs  173 (376)
T KOG1372|consen  104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQ--------ASTSELYGKV--QEIPQS  173 (376)
T ss_pred             ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEe--------cccHhhcccc--cCCCcc
Confidence            8776  9999998775433  456667888899999999998752  2222221        4667789975  477889


Q ss_pred             CCCCCCCCCCcchhHHHHHHHHHh----cCCCeeEEEEcCCceeec-cCCCcchhH-HHHHHHHH-HhhhcCCCceecCC
Q 015961          168 EDMPRLDAPNFYYTLEDILFEEVE----KKEELSWSVHRPDTIFGF-SPYSLMNLV-GALCVYAA-VCKHEGIPLRFPGT  240 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~~l~~~~~----~~~g~~~~ilRp~~v~G~-~~~~~~~~~-~~~~~~~~-i~~~~~~~~~~~g~  240 (397)
                      |.+|..|.++  |+..|+..-++.    +.+++=.   .-++++-. +|+...||+ ..+....+ |..+ ...-...|+
T Consensus       174 E~TPFyPRSP--Ya~aKmy~~WivvNyREAYnmfA---cNGILFNHESPRRGenFVTRKItRsvakI~~g-qqe~~~LGN  247 (376)
T KOG1372|consen  174 ETTPFYPRSP--YAAAKMYGYWIVVNYREAYNMFA---CNGILFNHESPRRGENFVTRKITRSVAKISLG-QQEKIELGN  247 (376)
T ss_pred             cCCCCCCCCh--hHHhhhhheEEEEEhHHhhccee---eccEeecCCCCccccchhhHHHHHHHHHhhhc-ceeeEEecc
Confidence            9999999877  666555432210    1111100   01233332 455566663 33433322 2221 122355888


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961          241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  320 (397)
Q Consensus       241 ~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
                      .+..+++.+..|.   +++ +|.+++...+ +.|-|+.++..|++|+++......|....- ..+..+-.+.+. .    
T Consensus       248 L~a~RDWGhA~dY---VEA-MW~mLQ~d~P-dDfViATge~hsVrEF~~~aF~~ig~~l~W-eg~gv~~~~~n~-~----  316 (376)
T KOG1372|consen  248 LSALRDWGHAGDY---VEA-MWLMLQQDSP-DDFVIATGEQHSVREFCNLAFAEIGEVLNW-EGEGVDEVGKND-D----  316 (376)
T ss_pred             hhhhcccchhHHH---HHH-HHHHHhcCCC-CceEEecCCcccHHHHHHHHHHhhCcEEee-cccccccccccC-C----
Confidence            8766666555544   555 4555554443 459999999999999999988888853210 000000000000 0    


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHH
Q 015961          321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWID  388 (397)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~  388 (397)
                      -+.           +-.+++.-+..          -..+.+..|.+|+++ |||+|+.+..|-++++++
T Consensus       317 g~v-----------~V~v~~kYyRP----------tEVd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~  364 (376)
T KOG1372|consen  317 GVV-----------RVKVDPKYYRP----------TEVDTLQGDASKAKKTLGWKPKVTFPELVKEMVA  364 (376)
T ss_pred             ceE-----------EEEecccccCc----------chhhhhcCChHHHHHhhCCCCccCHHHHHHHHHH
Confidence            000           00011111100          011256689999986 799999999888887765

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.84  E-value=3.4e-19  Score=162.58  Aligned_cols=255  Identities=17%  Similarity=0.087  Sum_probs=151.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------------C--CCCCCceEEEccCCCH----
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------------W--NADHLVEYVQCDVSDP----   85 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------------~--~~~~~v~~~~~Dl~d~----   85 (397)
                      ++||+||||||+|.+|+.+|+...    ..+|+|++|..+.+               +  ....+|+++.||+..+    
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~----~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL   76 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRS----DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL   76 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcC----CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence            479999999999999999999842    34899999976521               1  1236899999999854    


Q ss_pred             --HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           86 --EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        86 --~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        ..++++...+|.|+|.++... ...++.+....||.||+.+++.|...  +.+.++|+||+.++.......+     .
T Consensus        77 ~~~~~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~~~~~-----~  148 (382)
T COG3320          77 SERTWQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEYYSNF-----T  148 (382)
T ss_pred             CHHHHHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccccCCC-----c
Confidence              567777788999999987532 23467888899999999999988763  4777888887766644211111     1


Q ss_pred             CCCCCCCCCCC---CCCcchhHHHHHHHHHh---cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC-C-c
Q 015961          164 PPFTEDMPRLD---APNFYYTLEDILFEEVE---KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-P-L  235 (397)
Q Consensus       164 ~~~~E~~p~~~---~~~~~y~~e~~l~~~~~---~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~-~  235 (397)
                      ...+++.|...   .....|+++|+.+|...   .+.|++++|+||+.|.|.+.....|.-..+..++.....+|. | +
T Consensus       149 ~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~  228 (382)
T COG3320         149 VDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS  228 (382)
T ss_pred             cccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc
Confidence            11223333221   11234666555544431   234899999999999997653222222222222222222332 2 1


Q ss_pred             eecCCccccceeeeccc--HHHHHHHHHHHhcCCCCCCCcee-ccCCCeeehHHHHHHHHH
Q 015961          236 RFPGTKAAWECYSIASD--ADLIAEHQIWAAVDPYAKNEAFN-CNNGDVFKWKHLWKVLAE  293 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~d--a~~la~~~~~~~~~~~~~g~~yn-i~~~~~~s~~el~~~i~~  293 (397)
                      ...-+...-+++.+...  +..+++++..+..++......|+ ..-|..+...++.+-+.+
T Consensus       229 ~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         229 EYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             ccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            11111111112222222  23344333333323333334455 233778899988887777

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.83  E-value=2.5e-18  Score=191.18  Aligned_cols=338  Identities=15%  Similarity=0.113  Sum_probs=193.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---------------C--CCCCceEEEccCCCH---
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------------N--ADHLVEYVQCDVSDP---   85 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------------~--~~~~v~~~~~Dl~d~---   85 (397)
                      .++|||||||||+|++|+++|++.+.. ..++|+|+.|......               .  ...+++++.+|+.++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~-~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSN-SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCC-CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            478999999999999999999973210 1378999999743210               0  013688999999744   


Q ss_pred             ---HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC--
Q 015961           86 ---EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK--  160 (397)
Q Consensus        86 ---~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~--  160 (397)
                         +.+..+..++|.|+|+|+.... ..+......+|+.|+.+++++|++.  ++++++++||..+|+..  .+....  
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~--~~~~~~~~ 1124 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHW-VYPYSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTE--YYVNLSDE 1124 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecC-ccCHHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcc--cccchhhh
Confidence               5566677789999999876432 2234555578999999999999875  36788999988777532  111100  


Q ss_pred             ---CCCCCCCCCCCCCC---CCCcchhHHHHHHHHHh---cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          161 ---PYDPPFTEDMPRLD---APNFYYTLEDILFEEVE---KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       161 ---~~~~~~~E~~p~~~---~~~~~y~~e~~l~~~~~---~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                         .....+.|+.+..+   .....|++.|++.+...   .+.|++++++||+.|||++.....+....+...+.-....
T Consensus      1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443      1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred             hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh
Confidence               00112333332211   11234776555444321   2358999999999999964332222212221111111112


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcC
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEG  309 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~  309 (397)
                      +.   +| ....   ..+..+++++|.+++.++..+.  ..+.+||++++..+++.++++.+.+. |.+..         
T Consensus      1205 ~~---~p-~~~~---~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~--------- 1267 (1389)
T TIGR03443      1205 GL---IP-NINN---TVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE--------- 1267 (1389)
T ss_pred             CC---cC-CCCC---ccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC---------
Confidence            21   12 1121   2344556667888887776543  23468999999899999999999764 55422         


Q ss_pred             CCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhh-hhhcCcccccchhhHHH-c-------CCCCc---c
Q 015961          310 GGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVD-LVLTGEAKLASMNKSKE-H-------GFSGF---R  377 (397)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~-l-------G~~p~---~  377 (397)
                           ..+..+|.......    ....+ ...++.....+ |.+ .........+|.++.++ +       |....   .
T Consensus      1268 -----~~~~~~w~~~l~~~----~~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1336 (1389)
T TIGR03443      1268 -----IVDYVHWRKSLERF----VIERS-EDNALFPLLHF-VLDDLPQSTKAPELDDTNAATSLKADAAWTGVDVSSGAG 1336 (1389)
T ss_pred             -----ccCHHHHHHHHHHh----ccccC-ccchhhhHHHH-hhccCcccccCCCCCCHHHHHHHHhhcccccCCCcCCCC
Confidence                 24455665432100    00000 00111000000 000 00111144567777765 3       33322   2


Q ss_pred             CCHHHHHHHHHHHhcCCCCC
Q 015961          378 NSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       378 ~~~e~~~~~~~~~~~~~~~~  397 (397)
                      -.++-|+.+++++++.|++|
T Consensus      1337 ~~~~~~~~~~~~~~~~~~l~ 1356 (1389)
T TIGR03443      1337 VTEEQIGIYIAYLVKVGFLP 1356 (1389)
T ss_pred             CCHHHHHHHHHHHHHCCCCC
Confidence            35678889999999888874

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.82  E-value=2.2e-20  Score=169.07  Aligned_cols=167  Identities=23%  Similarity=0.223  Sum_probs=93.4

Q ss_pred             EEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC------------CC--------CCCCceEEEccCCCH---
Q 015961           31 IVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN------------WN--------ADHLVEYVQCDVSDP---   85 (397)
Q Consensus        31 VtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~------------~~--------~~~~v~~~~~Dl~d~---   85 (397)
                      |||||||+|++|+++|++     .+.  +|+|+.|.....            ..        ...+++++.||++++   
T Consensus         1 lTGaTGflG~~ll~~Ll~-----~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG   75 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLR-----QPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG   75 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHH-----HS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred             CcCCCcHHHHHHHHHHHc-----CCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence            799999999999999998     443  899999976321            00        146899999999975   


Q ss_pred             ---HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCC
Q 015961           86 ---EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        86 ---~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         +++..+.+.++.|+|+|+..... .+..+..++|+.||+++++.|....  .++++++||..+.+.   ..+..  .
T Consensus        76 L~~~~~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~--~~~~~~iSTa~v~~~---~~~~~--~  147 (249)
T PF07993_consen   76 LSDEDYQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGK--RKRFHYISTAYVAGS---RPGTI--E  147 (249)
T ss_dssp             --HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS----TTT----
T ss_pred             CChHHhhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhcc--CcceEEeccccccCC---CCCcc--c
Confidence               45666778899999998754332 2556688999999999999998643  348888887222221   11110  0


Q ss_pred             CCC--CCCCCC-CCCCCCcchhHHHHHHHHHh----cCCCeeEEEEcCCceeecc
Q 015961          163 DPP--FTEDMP-RLDAPNFYYTLEDILFEEVE----KKEELSWSVHRPDTIFGFS  210 (397)
Q Consensus       163 ~~~--~~E~~p-~~~~~~~~y~~e~~l~~~~~----~~~g~~~~ilRp~~v~G~~  210 (397)
                      +..  ..+... ........|.++|+++|...    ++.|++++|+||+.|+|.+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~  202 (249)
T PF07993_consen  148 EKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDS  202 (249)
T ss_dssp             SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SS
T ss_pred             ccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccC
Confidence            110  111111 11112335776555554431    3458999999999999953

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.80  E-value=1.3e-18  Score=157.89  Aligned_cols=234  Identities=15%  Similarity=0.137  Sum_probs=146.1

Q ss_pred             cCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCC-HHHHHHH
Q 015961           16 FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSD-PEETQAK   91 (397)
Q Consensus        16 ~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d-~~~l~~~   91 (397)
                      -+++....+| ++||||||||+||++|+++|++     +||+|++++|++...   .....+++++.+|+.| .+.+.+.
T Consensus         8 ~~~~~~~~~~-~~ilItGasG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~   81 (251)
T PLN00141          8 SEEDAENVKT-KTVFVAGATGRTGKRIVEQLLA-----KGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEA   81 (251)
T ss_pred             cccccccccC-CeEEEECCCcHHHHHHHHHHHh-----CCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHH
Confidence            3444445555 6899999999999999999998     899999999976432   1112468899999998 4667777


Q ss_pred             H-ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961           92 L-SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus        92 ~-~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      + .++|.|+|+++...  ..++...+++|..++.++++++++.+  +++++++||..+|+..         ...+..+..
T Consensus        82 ~~~~~d~vi~~~g~~~--~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~iV~iSS~~v~g~~---------~~~~~~~~~  148 (251)
T PLN00141         82 IGDDSDAVICATGFRR--SFDPFAPWKVDNFGTVNLVEACRKAG--VTRFILVSSILVNGAA---------MGQILNPAY  148 (251)
T ss_pred             hhcCCCEEEECCCCCc--CCCCCCceeeehHHHHHHHHHHHHcC--CCEEEEEccccccCCC---------cccccCcch
Confidence            7 67888888754321  11223345789999999999998753  6889988876555321         011111110


Q ss_pred             CCCCCCCc-chhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 015961          171 PRLDAPNF-YYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI  249 (397)
Q Consensus       171 p~~~~~~~-~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~  249 (397)
                      .  ....+ .+...+...+.+.++.+++++++||+++++....                   +.....++.. .+   ..
T Consensus       149 ~--~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~-------------------~~~~~~~~~~-~~---~~  203 (251)
T PLN00141        149 I--FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPT-------------------GNIVMEPEDT-LY---EG  203 (251)
T ss_pred             h--HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCC-------------------ceEEECCCCc-cc---cC
Confidence            0  00010 0112333333222567899999999999983111                   0000011111 00   11


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCCceeccCC---CeeehHHHHHHHHH
Q 015961          250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNG---DVFKWKHLWKVLAE  293 (397)
Q Consensus       250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~---~~~s~~el~~~i~~  293 (397)
                      ..+..++|..+..++..+...+.++.+.+.   -..++++++..+++
T Consensus       204 ~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        204 SISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             cccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            234566688888887776666777888762   23789988887754

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.76  E-value=5.4e-18  Score=146.17  Aligned_cols=149  Identities=24%  Similarity=0.335  Sum_probs=107.7

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecccC
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTN  108 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~~~  108 (397)
                      |+|+||||++|++|+++|++     +|++|++++|++.+... ..+++++.+|+.|++++.+++.++|.|+|+++   ..
T Consensus         1 I~V~GatG~vG~~l~~~L~~-----~~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~---~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLR-----RGHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAG---PP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHH-----TTSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCH---ST
T ss_pred             eEEECCCChHHHHHHHHHHH-----CCCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhhcchhhhhhh---hh
Confidence            79999999999999999999     78999999998764321 47999999999999999999999999999853   22


Q ss_pred             CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHH
Q 015961          109 RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFE  188 (397)
Q Consensus       109 ~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l~~  188 (397)
                      ..        ....+++++++|++.+  +++++++|+..+|...          ........  .+....++...+...+
T Consensus        72 ~~--------~~~~~~~~~~a~~~~~--~~~~v~~s~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~e~  129 (183)
T PF13460_consen   72 PK--------DVDAAKNIIEAAKKAG--VKRVVYLSSAGVYRDP----------PGLFSDED--KPIFPEYARDKREAEE  129 (183)
T ss_dssp             TT--------HHHHHHHHHHHHHHTT--SSEEEEEEETTGTTTC----------TSEEEGGT--CGGGHHHHHHHHHHHH
T ss_pred             cc--------cccccccccccccccc--cccceeeeccccCCCC----------Cccccccc--ccchhhhHHHHHHHHH
Confidence            12        2778889999999864  7899988876655321          11000000  0111122322223333


Q ss_pred             HHhcCCCeeEEEEcCCceeec
Q 015961          189 EVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       189 ~~~~~~g~~~~ilRp~~v~G~  209 (397)
                      .. ++.+++|+++||+.+||.
T Consensus       130 ~~-~~~~~~~~ivrp~~~~~~  149 (183)
T PF13460_consen  130 AL-RESGLNWTIVRPGWIYGN  149 (183)
T ss_dssp             HH-HHSTSEEEEEEESEEEBT
T ss_pred             HH-HhcCCCEEEEECcEeEeC
Confidence            33 556999999999999995

...

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.75  E-value=2.1e-16  Score=137.65  Aligned_cols=229  Identities=15%  Similarity=0.138  Sum_probs=158.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      .+--+-|+|||||+|.+++.+|.+     .|-+|++--|..+..      .-+...+-+...|+.|+++++++++..+.|
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak-----~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVV  134 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAK-----MGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVV  134 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhh-----cCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEE
Confidence            344567999999999999999999     788999888865432      112356778899999999999999999999


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC--
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP--  176 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~--  176 (397)
                      +++.+.-+-.  ....+.++|+.+.+.|...|++.+  +.+++.+|.          .|..      +.     .+..  
T Consensus       135 INLIGrd~eT--knf~f~Dvn~~~aerlAricke~G--VerfIhvS~----------Lgan------v~-----s~Sr~L  189 (391)
T KOG2865|consen  135 INLIGRDYET--KNFSFEDVNVHIAERLARICKEAG--VERFIHVSC----------LGAN------VK-----SPSRML  189 (391)
T ss_pred             EEeecccccc--CCcccccccchHHHHHHHHHHhhC--hhheeehhh----------cccc------cc-----ChHHHH
Confidence            9997643221  223456899999999999999875  788887762          2210      00     0000  


Q ss_pred             CcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec-CCccccceeeecccHHH
Q 015961          177 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP-GTKAAWECYSIASDADL  255 (397)
Q Consensus       177 ~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-g~~~~~~~~~~~~da~~  255 (397)
                      ...+..|+.+.++.     -+.+|+||+.|||...+ ..|.      |+.+.+..+ .+++. +.......-+++.|+  
T Consensus       190 rsK~~gE~aVrdaf-----PeAtIirPa~iyG~eDr-fln~------ya~~~rk~~-~~pL~~~GekT~K~PVyV~DV--  254 (391)
T KOG2865|consen  190 RSKAAGEEAVRDAF-----PEATIIRPADIYGTEDR-FLNY------YASFWRKFG-FLPLIGKGEKTVKQPVYVVDV--  254 (391)
T ss_pred             HhhhhhHHHHHhhC-----Ccceeechhhhcccchh-HHHH------HHHHHHhcC-ceeeecCCcceeeccEEEehH--
Confidence            11133355554433     46899999999994322 2221      222234333 23332 223334455566665  


Q ss_pred             HHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCC
Q 015961          256 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED  299 (397)
Q Consensus       256 la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~  299 (397)
                       |.+++.++..+...|++|..+++..+.+.||++.+-+..-+-.
T Consensus       255 -aa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~~~  297 (391)
T KOG2865|consen  255 -AAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMAREWP  297 (391)
T ss_pred             -HHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhhcc
Confidence             8888888888899999999999999999999999988876533

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.74  E-value=3e-17  Score=160.30  Aligned_cols=227  Identities=15%  Similarity=0.096  Sum_probs=142.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------C----------CCCCceEEEccCCCHH
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------N----------ADHLVEYVQCDVSDPE   86 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~----------~~~~v~~~~~Dl~d~~   86 (397)
                      ..++++||||||+|+||++++++|++     .|++|++++|+.....      .          ...+++++.+|+.|.+
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk-----~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e  151 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLK-----LGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD  151 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence            34568999999999999999999998     8999999999754210      0          0135789999999999


Q ss_pred             HHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           87 ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        87 ~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      ++.+++.++|.|+|+++.......+....+++|+.|+.+++++|++.+  +.+|+++||...+     ..+      .+ 
T Consensus       152 sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag--VgRIV~VSSiga~-----~~g------~p-  217 (576)
T PLN03209        152 QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK--VNHFILVTSLGTN-----KVG------FP-  217 (576)
T ss_pred             HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC--CCEEEEEccchhc-----ccC------cc-
Confidence            999999999999998764321112345567899999999999998754  7789988864321     011      00 


Q ss_pred             CCCCCCCCCCCcch-hHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961          167 TEDMPRLDAPNFYY-TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  245 (397)
Q Consensus       167 ~E~~p~~~~~~~~y-~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  245 (397)
                       .. ...  ....| ...+.+++.+ ...|+++++|||+.+.++..+....  ..+            . ...++ .   
T Consensus       218 -~~-~~~--sk~~~~~~KraaE~~L-~~sGIrvTIVRPG~L~tp~d~~~~t--~~v------------~-~~~~d-~---  273 (576)
T PLN03209        218 -AA-ILN--LFWGVLCWKRKAEEAL-IASGLPYTIVRPGGMERPTDAYKET--HNL------------T-LSEED-T---  273 (576)
T ss_pred             -cc-chh--hHHHHHHHHHHHHHHH-HHcCCCEEEEECCeecCCccccccc--cce------------e-ecccc-c---
Confidence             00 000  11112 2233333333 5679999999999998731111000  000            0 00000 0   


Q ss_pred             eeeecccHHHHHHHHHHHhcCCC-CCCCceeccCCCeeehHHHHHHHH
Q 015961          246 CYSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNGDVFKWKHLWKVLA  292 (397)
Q Consensus       246 ~~~~~~da~~la~~~~~~~~~~~-~~g~~yni~~~~~~s~~el~~~i~  292 (397)
                      .+.....-.++|..+++++.++. ..+.+|.+.++.......+.+.+.
T Consensus       274 ~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~  321 (576)
T PLN03209        274 LFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLA  321 (576)
T ss_pred             cCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHH
Confidence            00111233456888888777554 568899999876443344444443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.9e-17  Score=149.12  Aligned_cols=229  Identities=13%  Similarity=0.080  Sum_probs=142.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      |.|+||||||+||||++++++|++     +|++|+++.|++...  .  ....++.++.+|++|.+++.+++.       
T Consensus         1 m~k~vlVtGasg~IG~~la~~L~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (276)
T PRK06482          1 MSKTWFITGASSGFGRGMTERLLA-----RGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALG   75 (276)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999998     899999999975321  0  012468899999999988776654       


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.|+|+++......      +.....+++|+.++.++++++...  .....+++++||...+      .+      . 
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~------~-  142 (276)
T PRK06482         76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ------IA------Y-  142 (276)
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc------cC------C-
Confidence            3677999887543211      134567789999999999997432  1235678877642111      00      0 


Q ss_pred             CCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCce---eeccCCCc--ch-h-HHHHHHHHHHhhhc
Q 015961          166 FTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTI---FGFSPYSL--MN-L-VGALCVYAAVCKHE  231 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v---~G~~~~~~--~~-~-~~~~~~~~~i~~~~  231 (397)
                           |  +  ...|+.     +.++..+..  ..+|++++++||+.+   ||.+....  .. . ......+   .+..
T Consensus       143 -----~--~--~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~  210 (276)
T PRK06482        143 -----P--G--FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDL---RRAL  210 (276)
T ss_pred             -----C--C--CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHH---HHHH
Confidence                 0  1  112553     333333221  246899999999987   65322110  00 0 0001011   1111


Q ss_pred             -CCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhC
Q 015961          232 -GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG  296 (397)
Q Consensus       232 -~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g  296 (397)
                       ..++.         .   ..|.++++.+++.++..+ ..+..||++++...+++|+++.+.+.++
T Consensus       211 ~~~~~~---------~---~~d~~~~~~a~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        211 ADGSFA---------I---PGDPQKMVQAMIASADQT-PAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             hhccCC---------C---CCCHHHHHHHHHHHHcCC-CCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence             11101         0   134566688888877543 3456799999988999988888877664

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.73  E-value=4.8e-17  Score=154.32  Aligned_cols=258  Identities=19%  Similarity=0.193  Sum_probs=158.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCC-CCCCCCcEEEEEeCCCCCC--------C--------------CCCCCceEEEcc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN--------W--------------NADHLVEYVQCD   81 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~-~~~~~g~~V~~l~R~~~~~--------~--------------~~~~~v~~~~~D   81 (397)
                      .+|+|||||||||+|+-|+++|++. +.+.   +|+.+.|.+...        +              ....++..+.||
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~---~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVK---RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcc---eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            4689999999999999999999874 3443   899999975422        0              012467789999


Q ss_pred             CCCH------HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccc
Q 015961           82 VSDP------EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEA  155 (397)
Q Consensus        82 l~d~------~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~  155 (397)
                      +.++      .+++.....++.|+|+|+.... .+..+....+|..||+++++.|++. .+++-++++|++.+.+-....
T Consensus        88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrF-de~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n~~~~~i  165 (467)
T KOG1221|consen   88 ISEPDLGISESDLRTLADEVNIVIHSAATVRF-DEPLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSNCNVGHI  165 (467)
T ss_pred             ccCcccCCChHHHHHHHhcCCEEEEeeeeecc-chhhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhheecccccc
Confidence            9865      4566677888999999875332 2244556789999999999999985 568888888875544211101


Q ss_pred             cCCCCCCCC--C------CCCCC---------CC--CCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeecc-
Q 015961          156 FGKIKPYDP--P------FTEDM---------PR--LDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFS-  210 (397)
Q Consensus       156 ~g~~~~~~~--~------~~E~~---------p~--~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~-  210 (397)
                      ....++...  +      ..|+.         |.  ...++. |..     |.++.+   ...++|++|+||+.|.... 
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNT-YtfTKal~E~~i~~---~~~~lPivIiRPsiI~st~~  241 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNT-YTFTKALAEMVIQK---EAENLPLVIIRPSIITSTYK  241 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCc-eeehHhhHHHHHHh---hccCCCeEEEcCCceecccc
Confidence            000000000  0      11111         00  011222 333     444444   4567999999999999852 


Q ss_pred             ---CCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC-CC----CCCCceeccCCC--
Q 015961          211 ---PYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD-PY----AKNEAFNCNNGD--  280 (397)
Q Consensus       211 ---~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~-~~----~~g~~yni~~~~--  280 (397)
                         ||+..|.-.+.++.+.  -+.|.--.+.++..   .+.|+..+|.++.+++.++-. ..    ....+||++++.  
T Consensus       242 EP~pGWidn~~gp~g~i~g--~gkGvlr~~~~d~~---~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~N  316 (467)
T KOG1221|consen  242 EPFPGWIDNLNGPDGVIIG--YGKGVLRCFLVDPK---AVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDN  316 (467)
T ss_pred             CCCCCccccCCCCceEEEE--eccceEEEEEEccc---cccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccC
Confidence               2332232111111100  01121112334433   677888888888888866522 11    124599999854  


Q ss_pred             eeehHHHHHHHHHHhC
Q 015961          281 VFKWKHLWKVLAEQFG  296 (397)
Q Consensus       281 ~~s~~el~~~i~~~~g  296 (397)
                      +++|.++.+...+.+-
T Consensus       317 p~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  317 PVTWGDFIELALRYFE  332 (467)
T ss_pred             cccHHHHHHHHHHhcc
Confidence            4999999998888765

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.71  E-value=3.6e-17  Score=146.71  Aligned_cols=224  Identities=16%  Similarity=0.199  Sum_probs=140.4

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |+||||||.+|+++++.|++     .+++|++++|++...   .+...+++++.+|+.|.+++.++++++|.|+.+.   
T Consensus         1 I~V~GatG~~G~~v~~~L~~-----~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~---   72 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLS-----AGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVT---   72 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHH-----TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEES---
T ss_pred             CEEECCccHHHHHHHHHHHh-----CCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeec---
Confidence            79999999999999999999     799999999987432   1123578899999999999999999999887762   


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  185 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~  185 (397)
                      ....       ...+....++++||++++  ++||++.|           ++..    .  .+.....|. ...+.....
T Consensus        73 ~~~~-------~~~~~~~~~li~Aa~~ag--Vk~~v~ss-----------~~~~----~--~~~~~~~p~-~~~~~~k~~  125 (233)
T PF05368_consen   73 PPSH-------PSELEQQKNLIDAAKAAG--VKHFVPSS-----------FGAD----Y--DESSGSEPE-IPHFDQKAE  125 (233)
T ss_dssp             SCSC-------CCHHHHHHHHHHHHHHHT---SEEEESE-----------ESSG----T--TTTTTSTTH-HHHHHHHHH
T ss_pred             Ccch-------hhhhhhhhhHHHhhhccc--cceEEEEE-----------eccc----c--ccccccccc-chhhhhhhh
Confidence            2111       223445668999999875  99998543           1110    0  111111111 112333344


Q ss_pred             HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 015961          186 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  265 (397)
Q Consensus       186 l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~  265 (397)
                      +.++. ++.+++++++||+..+...       ...+..... .+.....+.+++++.....+.  .+..++++++..++.
T Consensus       126 ie~~l-~~~~i~~t~i~~g~f~e~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~Dvg~~va~il~  194 (233)
T PF05368_consen  126 IEEYL-RESGIPYTIIRPGFFMENL-------LPPFAPVVD-IKKSKDVVTLPGPGNQKAVPV--TDTRDVGRAVAAILL  194 (233)
T ss_dssp             HHHHH-HHCTSEBEEEEE-EEHHHH-------HTTTHHTTC-SCCTSSEEEEETTSTSEEEEE--EHHHHHHHHHHHHHH
T ss_pred             hhhhh-hhccccceeccccchhhhh-------hhhhccccc-ccccceEEEEccCCCcccccc--ccHHHHHHHHHHHHc
Confidence            44554 5669999999988776621       110100000 000011234455444322232  355556777777776


Q ss_pred             CCCCC--CCceeccCCCeeehHHHHHHHHHHhCCCC
Q 015961          266 DPYAK--NEAFNCNNGDVFKWKHLWKVLAEQFGIED  299 (397)
Q Consensus       266 ~~~~~--g~~yni~~~~~~s~~el~~~i~~~~g~~~  299 (397)
                      ++...  ++.+++++ +.+|++|+++.+.+.+|++.
T Consensus       195 ~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v  229 (233)
T PF05368_consen  195 DPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKKV  229 (233)
T ss_dssp             SGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSEE
T ss_pred             ChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCcc
Confidence            66544  67777765 88999999999999999874

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK09135 pteridine reductase; Provisional

Probab=99.70  E-value=7.6e-16  Score=139.29  Aligned_cols=214  Identities=16%  Similarity=0.130  Sum_probs=129.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      ++++||||||+||||++++++|++     +|++|++++|+....       .  .....+.++.+|++|.+++..+++. 
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   79 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHA-----AGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAAC   79 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999998     899999999864221       0  0113577899999999988777664 


Q ss_pred             ------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCC
Q 015961           95 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        95 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                            +|.|+|+++......      ++....+++|+.|+.++++++...- ..-..++..++         ..     
T Consensus        80 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~---------~~-----  145 (249)
T PRK09135         80 VAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD---------IH-----  145 (249)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC---------hh-----
Confidence                  578999977432211      1356678999999999999986531 11122322221         11     


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhc-CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                            +..|..+...  |+.     +.++..+..+ ..+++++++||+.++|+......+   ...... ..  .+.++
T Consensus       146 ------~~~~~~~~~~--Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~---~~~~~~-~~--~~~~~  211 (249)
T PRK09135        146 ------AERPLKGYPV--YCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFD---EEARQA-IL--ARTPL  211 (249)
T ss_pred             ------hcCCCCCchh--HHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCC---HHHHHH-HH--hcCCc
Confidence                  1122222222  553     4444444311 136999999999999953221111   111100 01  11121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC-CCCCCceeccCCCeee
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP-YAKNEAFNCNNGDVFK  283 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~-~~~g~~yni~~~~~~s  283 (397)
                      ...            .+.+++|+++.+++... ...|++||++++..++
T Consensus       212 ~~~------------~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        212 KRI------------GTPEDIAEAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             CCC------------cCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence            101            12455677775555432 3468899999987655

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.2e-15  Score=135.27  Aligned_cols=217  Identities=22%  Similarity=0.173  Sum_probs=132.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++++||||||+|+||++++++|++     +|++|++++|+....       +. ...++.++.+|++|++++..+++   
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~-----~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAG-----AGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAR   79 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            458999999999999999999998     899999999865321       00 11356789999999998876665   


Q ss_pred             ----cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                          .+|.|+|+|+.......++...+++|+.++.++++++.+...+-.+++++||....      +.       +..+.
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~------~~-------~~~~~  146 (248)
T PRK07806         80 EEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH------FI-------PTVKT  146 (248)
T ss_pred             HhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh------cC-------ccccC
Confidence                46778888754222222456678899999999999998652222467767642111      10       00111


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCc-
Q 015961          170 MPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK-  241 (397)
Q Consensus       170 ~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~-  241 (397)
                      .|.    ...|+.     |.++..+..  ...++++++++|+.+-++-       ...+.     .+  ..+    +.. 
T Consensus       147 ~~~----~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~-------~~~~~-----~~--~~~----~~~~  204 (248)
T PRK07806        147 MPE----YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV-------TATLL-----NR--LNP----GAIE  204 (248)
T ss_pred             Ccc----ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch-------hhhhh-----cc--CCH----HHHH
Confidence            111    112553     444433321  3467999999988776621       01110     00  000    000 


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCe
Q 015961          242 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV  281 (397)
Q Consensus       242 ~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~  281 (397)
                      ..........++.++|.++++++......|++|++++++.
T Consensus       205 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        205 ARREAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             HHHhhhcccCCHHHHHHHHHHHhhccccCccEEEecCccc
Confidence            0001122445666778888888876666799999998764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.64  E-value=1.1e-14  Score=131.89  Aligned_cols=214  Identities=15%  Similarity=0.052  Sum_probs=130.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      +.++++||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|+.|.+++.+.++  
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAA-----DGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAG   77 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            34668999999999999999999998     899999999974321      0 011357889999999998877775  


Q ss_pred             -----cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 -----QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           .+|.|+|+++.....    .  .+....+++|+.++.++++++...  ..+..+++++|+...+.          
T Consensus        78 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~----------  147 (251)
T PRK12826         78 VEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR----------  147 (251)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc----------
Confidence                 467789987643321    1  134667899999999999987532  12356777776532220          


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                         .+      ...  ...|+.     +.++..+.  ....+++++++||+.++|+.......  ..+   ..... ...
T Consensus       148 ---~~------~~~--~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~---~~~~~-~~~  210 (251)
T PRK12826        148 ---VG------YPG--LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--AQW---AEAIA-AAI  210 (251)
T ss_pred             ---cC------CCC--ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--hHH---HHHHH-hcC
Confidence               00      001  112443     33333322  13458999999999999943221111  000   00000 111


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  280 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~  280 (397)
                      |+.            ...++.++|..+..++....  ..|++|++.+|.
T Consensus       211 ~~~------------~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        211 PLG------------RLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             CCC------------CCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            210            12344555777766654432  358899987654

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.63  E-value=3.3e-15  Score=137.42  Aligned_cols=235  Identities=13%  Similarity=-0.049  Sum_probs=139.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      |+++||||||+|+||++++++|++     +|++|++++|++...    ......+.++++|++|.+++.+.+.       
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALE-----RGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999998     899999999975321    0012357788999999988766654       


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.|+|+|+......      ++....+++|+.++.++++++...  ..+..+++++||...+.+            . 
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~-  143 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA------------F-  143 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC------------C-
Confidence            3577889877543211      145677899999998887776321  112457777765322211            0 


Q ss_pred             CCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec
Q 015961          166 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  238 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (397)
                              + ....|+..|.     ...+.  ....|++++++||+.+..+..+...........+..+......     
T Consensus       144 --------~-~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-----  209 (275)
T PRK08263        144 --------P-MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE-----  209 (275)
T ss_pred             --------C-CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH-----
Confidence                    0 0112543222     22221  1346899999999988763211100000000000000000000     


Q ss_pred             CCccccceeeec-ccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhC
Q 015961          239 GTKAAWECYSIA-SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG  296 (397)
Q Consensus       239 g~~~~~~~~~~~-~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g  296 (397)
                        ..   ....+ .+..++|+.++.++..+...++.|+.+.+..+++.++.+.+.++.+
T Consensus       210 --~~---~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (275)
T PRK08263        210 --QW---SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE  263 (275)
T ss_pred             --HH---HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence              00   00112 4556678888887766555566555445567899999999888643

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=1e-14  Score=131.71  Aligned_cols=212  Identities=17%  Similarity=0.105  Sum_probs=130.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++++||||||||+||++|+++|++     +|++|+++.|+.....        ....++.++.+|+.|.+++.++++   
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   79 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLAR-----AGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAV   79 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHH
Confidence            347999999999999999999998     8999988887653210        112468899999999998877664   


Q ss_pred             ----cCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.|+|+++......    .  .....+++|+.++.++++++...  .....+++++||...+.      +.   
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~------~~---  150 (249)
T PRK12825         80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP------GW---  150 (249)
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC------CC---
Confidence                4577999887432211    1  34567889999999999887432  12367888777433221      10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (397)
                                 ..  ...|+.     +.++..+.  ....+++++++||+.++|+.....  ..... .    ......+
T Consensus       151 -----------~~--~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~-~----~~~~~~~  210 (249)
T PRK12825        151 -----------PG--RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT--IEEAR-E----AKDAETP  210 (249)
T ss_pred             -----------CC--chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc--cchhH-H----hhhccCC
Confidence                       01  112443     33333222  134689999999999999421111  10000 0    0000111


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  282 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~  282 (397)
                                  +......++++..+.+++.+.  ...|++|+++++..+
T Consensus       211 ------------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        211 ------------LGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             ------------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence                        011233455577777776543  245899999987543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.62  E-value=8.6e-14  Score=127.76  Aligned_cols=224  Identities=16%  Similarity=0.114  Sum_probs=147.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  106 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~  106 (397)
                      ++|||||||||+|++++++|++     .|++|++++|++........++++..+|+.++..+...+.+++.++++.....
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~-----~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~   75 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLA-----RGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD   75 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHh-----CCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccccEEEEEecccc
Confidence            4799999999999999999999     89999999998764321117899999999999999999999998888754322


Q ss_pred             cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHH
Q 015961          107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  186 (397)
Q Consensus       107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l  186 (397)
                         ... ...........+..+++.   ..+.+++++|          +++..        .      .+...|...+..
T Consensus        76 ---~~~-~~~~~~~~~~~~~a~~a~---~~~~~~~~~s----------~~~~~--------~------~~~~~~~~~~~~  124 (275)
T COG0702          76 ---GSD-AFRAVQVTAVVRAAEAAG---AGVKHGVSLS----------VLGAD--------A------ASPSALARAKAA  124 (275)
T ss_pred             ---ccc-chhHHHHHHHHHHHHHhc---CCceEEEEec----------cCCCC--------C------CCccHHHHHHHH
Confidence               111 233444445455555544   2366777554          33310        0      011225554444


Q ss_pred             HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 015961          187 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD  266 (397)
Q Consensus       187 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~  266 (397)
                      .+......|++++++|+..+|.  ..  ....  .  .  .....+.++...+.+     .......++++..+..+...
T Consensus       125 ~e~~l~~sg~~~t~lr~~~~~~--~~--~~~~--~--~--~~~~~~~~~~~~~~~-----~~~~i~~~d~a~~~~~~l~~  189 (275)
T COG0702         125 VEAALRSSGIPYTTLRRAAFYL--GA--GAAF--I--E--AAEAAGLPVIPRGIG-----RLSPIAVDDVAEALAAALDA  189 (275)
T ss_pred             HHHHHHhcCCCeEEEecCeeee--cc--chhH--H--H--HHHhhCCceecCCCC-----ceeeeEHHHHHHHHHHHhcC
Confidence            4444467899999999777766  11  1110  0  0  012224443322222     12333445556666655666


Q ss_pred             CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCC
Q 015961          267 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG  301 (397)
Q Consensus       267 ~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~  301 (397)
                      +...+++|.+++++..+..|+.+.+.+..|++...
T Consensus       190 ~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         190 PATAGRTYELAGPEALTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             CcccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence            66778999999999999999999999999988665

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.61  E-value=1.1e-14  Score=132.68  Aligned_cols=161  Identities=12%  Similarity=-0.002  Sum_probs=103.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      ++++||||||+|+||++++++|++     .|++|++++|++...      . .....+.++++|++|.+.+.+++..   
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELAR-----AGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE   80 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999976321      0 0123567899999999888776653   


Q ss_pred             ----CCCeeEEEEecccCC------CcHHHHHHhHHHH----HHHHHHHH-cccCCCcceEEEecCCccccccccccCCC
Q 015961           95 ----LTDVTHIFYVTWTNR------STEAENCKINGSM----FRNVLRAV-IPNAPNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~-~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                          +|.|+|+++......      +..+..+++|+.+    ++++++++ +..  ...+++++||...+      ++  
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~~~~iv~~ss~~~~------~~--  150 (262)
T PRK13394         81 RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD--RGGVVIYMGSVHSH------EA--  150 (262)
T ss_pred             HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc--CCcEEEEEcchhhc------CC--
Confidence                677999987532211      1345667899999    67777777 432  35678877752211      11  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                          .+     +.........+.+.++..+..  ...+++++++||+.++++
T Consensus       151 ----~~-----~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~  193 (262)
T PRK13394        151 ----SP-----LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTP  193 (262)
T ss_pred             ----CC-----CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccch
Confidence                00     000000011112333322221  235799999999999984

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.60  E-value=4.5e-14  Score=129.91  Aligned_cols=227  Identities=15%  Similarity=0.114  Sum_probs=138.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC---CCCCceEEEccCCCHHHHHHHHc---
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      +++||||||+|+||++++++|++     +|++|++++|+....      ..   ...++.++.+|+.|++++...++   
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVA-----AGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT   81 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            58999999999999999999998     899999999975321      00   01357789999999988877665   


Q ss_pred             ----cCCCeeEEEEeccc--C---CC--cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCC
Q 015961           94 ----QLTDVTHIFYVTWT--N---RS--TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~--~---~~--~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                          .+|.++|+++....  .   .+  .....+++|+.++.++++++.+..  .+-.+++++||...+       .   
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~-------~---  151 (276)
T PRK05875         82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS-------N---  151 (276)
T ss_pred             HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc-------C---
Confidence                56889998864211  1   11  345677899999999988775531  123466766643221       1   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhh-cC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH-EG  232 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~-~~  232 (397)
                        ..      +  +  ...|+.     +.++..+..  ...+++++++||+.+.++-...... ....   .  ... ..
T Consensus       152 --~~------~--~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~---~--~~~~~~  213 (276)
T PRK05875        152 --TH------R--W--FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPEL---S--ADYRAC  213 (276)
T ss_pred             --CC------C--C--CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHH---H--HHHHcC
Confidence              00      0  1  112443     333333321  2357999999999887631111000 0001   0  000 01


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCCC--CCCceeccCCCee----ehHHHHHHHHHHhCC
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYA--KNEAFNCNNGDVF----KWKHLWKVLAEQFGI  297 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~--~g~~yni~~~~~~----s~~el~~~i~~~~g~  297 (397)
                      .++            ....++.++|.++++++..+..  .|++||++++..+    +..|+++.+.+..|.
T Consensus       214 ~~~------------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        214 TPL------------PRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             CCC------------CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            111            1122345567777777765433  3889999988776    777777776655544

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.59  E-value=9.2e-15  Score=132.72  Aligned_cols=156  Identities=14%  Similarity=0.095  Sum_probs=101.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-----CCCCCceEEEccCCCHHHHHHHH-------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----NADHLVEYVQCDVSDPEETQAKL-------   92 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-----~~~~~v~~~~~Dl~d~~~l~~~~-------   92 (397)
                      ++||||||+|+||++|+++|++     +|++|++++|++...  .     ....++.++.+|+.|.+++..++       
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAA-----AGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF   76 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999998     899999999975321  0     01235788999999998665544       


Q ss_pred             ccCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           93 SQLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      ..+|.|+|+++......    +  +....+++|+.|+.++++++...  .....+++++|+...+.      +      .
T Consensus        77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~------~------~  144 (255)
T TIGR01963        77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV------A------S  144 (255)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC------C------C
Confidence            34577888876533211    1  23556789999988888877432  12356788777532221      1      0


Q ss_pred             CCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          165 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                      +.        ...  |..     +.+...+.  ....+++++++||+.++++
T Consensus       145 ~~--------~~~--y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~  186 (255)
T TIGR01963       145 PF--------KSA--YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTP  186 (255)
T ss_pred             CC--------Cch--hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence            00        011  332     22222221  0235899999999999983

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.58  E-value=1.7e-14  Score=131.19  Aligned_cols=156  Identities=15%  Similarity=0.048  Sum_probs=102.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +++||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|++++.+++.     
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAK-----EGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998     899999999975431      0 012467789999999998877665     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.|+|+++......      +.....+++|+.++.++++++...  .....+++++||...+      ++.     
T Consensus        79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~------~~~-----  147 (258)
T PRK12429         79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGL------VGS-----  147 (258)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhc------cCC-----
Confidence              4677888876432211      133456788999955555544322  1236788887753222      110     


Q ss_pred             CCCCCCCCCCCCCCcchhH-----H---HHHHHHHhcCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----E---DILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e---~~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                       +        ....  |+.     +   +.+.... ...++.++++||+.++++
T Consensus       148 -~--------~~~~--y~~~k~a~~~~~~~l~~~~-~~~~i~v~~~~pg~v~~~  189 (258)
T PRK12429        148 -A--------GKAA--YVSAKHGLIGLTKVVALEG-ATHGVTVNAICPGYVDTP  189 (258)
T ss_pred             -C--------Ccch--hHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCCCcch
Confidence             0        0111  322     2   2222222 456899999999999984

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.58  E-value=3.2e-14  Score=129.48  Aligned_cols=230  Identities=13%  Similarity=0.039  Sum_probs=137.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHcc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ-----   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~-----   94 (397)
                      |++++|||||+|+||.+++++|++     +|++|++++|++...     .....++.++.+|+.|.+++..++..     
T Consensus         1 ~~k~ilItGat~~iG~~la~~L~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (257)
T PRK07074          1 TKRTALVTGAAGGIGQALARRFLA-----AGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER   75 (257)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999998     899999999975421     01123578899999999988776653     


Q ss_pred             --CCCeeEEEEecccCC---Cc---HHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           95 --LTDVTHIFYVTWTNR---ST---EAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        95 --~~~V~h~a~~~~~~~---~~---~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                        +|.|+|+++......   .+   ....+++|+.++.++++++...  ..+..+++++||...+.    .+|       
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~-------  144 (257)
T PRK07074         76 GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA----ALG-------  144 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC----CCC-------
Confidence              677888876432111   12   2334678999998888887432  12245677776422110    111       


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          165 PFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                           .+  .......+.+.++..+..  ...|+++..+||+.++++.-.........+..  ...  ...         
T Consensus       145 -----~~--~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~--~~~---------  204 (257)
T PRK07074        145 -----HP--AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFE--ELK--KWY---------  204 (257)
T ss_pred             -----Cc--ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHH--HHH--hcC---------
Confidence                 00  000111222333333321  33579999999999988421110000001100  000  011         


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeehHHHHHHHHH
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAE  293 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~~el~~~i~~  293 (397)
                         ...+..++++++.++++++...  ...|+++++.++...+.+||++.+.+
T Consensus       205 ---~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        205 ---PLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             ---CCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence               1123344555678877776442  33478889988888999999887754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=1.2e-13  Score=125.59  Aligned_cols=158  Identities=17%  Similarity=0.100  Sum_probs=105.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      |+|+||||||+|+||++++++|++     +|++|++++|+....       . ....++.++.+|++|++++..+++   
T Consensus         1 ~~k~vlItG~sg~iG~~la~~L~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (256)
T PRK12745          1 MRPVALVTGGRRGIGLGIARALAA-----AGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQ   75 (256)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            568899999999999999999998     899999999864321       0 012367899999999987766554   


Q ss_pred             ----cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc---CC-----CcceEEEecCCccccccc
Q 015961           94 ----QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN---AP-----NLRHVCLQTGTKHYLGPF  153 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~---~~-----~~~~~~~~s~~~~y~ss~  153 (397)
                          .+|.|+|+++......        +..++.+++|+.++.++++++.+.   ..     ...+++++||...+    
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----  151 (256)
T PRK12745         76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI----  151 (256)
T ss_pred             HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc----
Confidence                4677999876532211        244667899999999998887543   11     14567777643221    


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          154 EAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       154 ~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                        ++.        .      +...  |+.     +.++..+..  ...|++++++||+.+.++
T Consensus       152 --~~~--------~------~~~~--Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~  196 (256)
T PRK12745        152 --MVS--------P------NRGE--YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTD  196 (256)
T ss_pred             --cCC--------C------CCcc--cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCc
Confidence              110        0      1112  432     333333221  246899999999999883

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.58  E-value=6.1e-14  Score=126.43  Aligned_cols=157  Identities=17%  Similarity=0.093  Sum_probs=105.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      +++||||||+|+||.+++++|++     +|++|++++|++....       ....++.++.+|+.|++++..++++    
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAA-----DGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998     8999999999764310       0123577889999999887776654    


Q ss_pred             ---CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           95 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                         +|.|+|+++......      +.....++.|+.++.++++++...  ..+..+++++|+...      .++.     
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~------~~~~-----  148 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG------VTGN-----  148 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh------ccCC-----
Confidence               477999876432211      123556889999999999888542  223568887774221      1110     


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                               .+...  |..     +.+...+.  ....+++++++||+.++++
T Consensus       149 ---------~~~~~--y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~  190 (246)
T PRK05653        149 ---------PGQTN--YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTD  190 (246)
T ss_pred             ---------CCCcH--hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCc
Confidence                     01111  332     33333322  1346899999999999994

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.58  E-value=6e-14  Score=118.36  Aligned_cols=250  Identities=12%  Similarity=0.100  Sum_probs=152.1

Q ss_pred             CcccccccccccccccCccCccCCCCCEEEEEcCCChhHHHHHH-----HccCCCCCCCCcEEEEEeCCCCCCCCCCCCc
Q 015961            1 MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAE-----ILPLPDTPGGPWKVYGVARRPKPNWNADHLV   75 (397)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~-----~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v   75 (397)
                      |+|++...+|..|+              .++-+.+|+|+..|..     ++-+.. ...+|+|+.++|.+.+.     ++
T Consensus         1 ~~w~~~~~~~~sr~--------------a~~~~~~g~i~~nl~~~~~~~H~t~~~-~a~~h~vtv~sR~pg~~-----ri   60 (315)
T KOG3019|consen    1 KVWFSFFNSGKSRD--------------AVSNWSNGIIRENLGSETSCCHDTNVH-SADNHAVTVLSRSPGKA-----RI   60 (315)
T ss_pred             CccceeecCCcccc--------------CCCCccccchhccccCcccccccCCCC-cccccceEEEecCCCCc-----cc
Confidence            78988888777765              3556889999988876     333311 22469999999988653     33


Q ss_pred             eEEEccCCCHHHHHHHHccCCCeeEEEEe----cccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccc
Q 015961           76 EYVQCDVSDPEETQAKLSQLTDVTHIFYV----TWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY  149 (397)
Q Consensus        76 ~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~----~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y  149 (397)
                      .+-..|..-..      -.|+.++++++.    .-...+  -.++.....+..|+.|.+++..+-...+-++.+|++.+|
T Consensus        61 tw~el~~~Gip------~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y  134 (315)
T KOG3019|consen   61 TWPELDFPGIP------ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVY  134 (315)
T ss_pred             ccchhcCCCCc------eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEe
Confidence            33333321110      012222222111    111111  234555667777888999998874445678888988888


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCcchhH--HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHH
Q 015961          150 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAV  227 (397)
Q Consensus       150 ~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~--e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i  227 (397)
                      .-|         ....++|+.+...-+  +.+.  -++-..+.......+.+++|.+.|.|.+.+....+..++      
T Consensus       135 ~pS---------~s~eY~e~~~~qgfd--~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF------  197 (315)
T KOG3019|consen  135 VPS---------ESQEYSEKIVHQGFD--ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPF------  197 (315)
T ss_pred             ccc---------cccccccccccCChH--HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhh------
Confidence            543         123345555533211  1111  122222221233489999999999995444333333333      


Q ss_pred             hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961          228 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       228 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~  300 (397)
                      ..+.|.|   .|++.|+..++|+.|.   +..+.++.+++ ...++.|-..+++.+..|+++.+.+.++.+.-
T Consensus       198 ~~g~GGP---lGsG~Q~fpWIHv~DL---~~li~~ale~~-~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~  263 (315)
T KOG3019|consen  198 QMGAGGP---LGSGQQWFPWIHVDDL---VNLIYEALENP-SVKGVINGVAPNPVRNGEFCQQLGSALSRPSW  263 (315)
T ss_pred             hhccCCc---CCCCCeeeeeeehHHH---HHHHHHHHhcC-CCCceecccCCCccchHHHHHHHHHHhCCCcc
Confidence            3344666   7888988888887776   55555555553 44568999999999999999999999998743

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.6e-13  Score=124.98  Aligned_cols=158  Identities=16%  Similarity=0.090  Sum_probs=105.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      ++++||||||+|+||++++++|++     +|++|++++|++...  .  ....++..+.+|++|.+++..+++       
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALA-----AGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHh-----CcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999998     899999999975421  0  012357789999999988877665       


Q ss_pred             cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.|+|+|+......  +    .....+++|+.|+.++++++...  .....+++++||...+.      +      . 
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~------~------~-  144 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI------T------M-  144 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC------C------C-
Confidence            3677999987533211  1    23556899999999999986432  12245677776432111      1      0 


Q ss_pred             CCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          166 FTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                           |  +...  |+.     +.+...+.  ....|++++++||+.+.++
T Consensus       145 -----~--~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~  186 (277)
T PRK06180        145 -----P--GIGY--YCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD  186 (277)
T ss_pred             -----C--Ccch--hHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence                 0  1112  443     33332222  1245899999999999773

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3e-14  Score=130.07  Aligned_cols=159  Identities=14%  Similarity=0.071  Sum_probs=104.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .++++||||||+|+||++++++|++     +|++|++++|+....     .....++.++.+|++|++++..+++     
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAE-----AGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3458999999999999999999998     899999999975321     0011246889999999988776654     


Q ss_pred             --cCCCeeEEEEecccC-------CCcHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEecCCccccccccccCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN-------RSTEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~-------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                        ++|.|+|+++.....       .++....+++|+.++.++++++...  ..+. .+++++|+..      ..+|.   
T Consensus        84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~------~~~~~---  154 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVA------GRLGY---  154 (264)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccc------cccCC---
Confidence              578899998753111       1134677899999999998887432  1122 4565554311      01111   


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                               +  ....  |+.     +.++.....  ...+++++++||+.++|+
T Consensus       155 ---------~--~~~~--y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~  196 (264)
T PRK12829        155 ---------P--GRTP--YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGP  196 (264)
T ss_pred             ---------C--CCch--hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCCh
Confidence                     0  0011  443     333333221  235899999999999994

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.55  E-value=8.4e-14  Score=126.08  Aligned_cols=215  Identities=16%  Similarity=0.102  Sum_probs=128.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|++|||||+|+||.+++++|++     .|++|++++|.....      . ....++.++.+|++|.+++..+++    
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAR-----EGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999     899999999975321      0 011356788999999988766554    


Q ss_pred             ---cCCCeeEEEEecccC------C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961           94 ---QLTDVTHIFYVTWTN------R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~------~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                         .+|.|+|+++.....      .   +.....+++|+.++.++++++...  ..+..+++++||...|       .. 
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-  151 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW-------LY-  151 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc-------CC-
Confidence               467899987743210      0   134556789999999999988764  1124577776643322       10 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                                  ..+......+.+.+...+..  ...++++++++|+.+..+......  ...+..  ...+  +.+...
T Consensus       152 ------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~--~~~~--~~~~~~  213 (250)
T PRK07774        152 ------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVA--DMVK--GIPLSR  213 (250)
T ss_pred             ------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHH--HHHh--cCCCCC
Confidence                        00100111222444433321  245799999999988763211111  111100  0111  222110


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  282 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~  282 (397)
                               +   .+..++|..+++++....  ..|++||+.++..+
T Consensus       214 ---------~---~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        214 ---------M---GTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             ---------C---cCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence                     1   123455777777665432  46789999987654

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.55  E-value=2.4e-13  Score=123.42  Aligned_cols=158  Identities=11%  Similarity=0.016  Sum_probs=102.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++++|+||||+|+||++++++|++     +|++|+++ .|+....      .. ....+.++.+|++|.+++..+++   
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~-----~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~   79 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLAN-----DGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLK   79 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHH
Confidence            357999999999999999999998     89998775 4543211      10 12357789999999998877665   


Q ss_pred             ----------cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccC
Q 015961           94 ----------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 ----------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                                ++|.|+|+++......  +    .....+++|+.++.++++++.+.-....+++++||...+       .
T Consensus        80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~-------~  152 (254)
T PRK12746         80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR-------L  152 (254)
T ss_pred             HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc-------C
Confidence                      3677888876432211  1    225567899999999999887642223467777643322       1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                      +     .        .+  ...|+.     +.+...+..  ...++++++++|+.+.++
T Consensus       153 ~-----~--------~~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  196 (254)
T PRK12746        153 G-----F--------TG--SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTD  196 (254)
T ss_pred             C-----C--------CC--CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCc
Confidence            1     0        01  111442     333322221  246799999999999883

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.55  E-value=4.5e-14  Score=128.50  Aligned_cols=223  Identities=12%  Similarity=0.039  Sum_probs=129.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      ++++||||||+|+||.+++++|++     +|++|++++|+.....    .....+.++.+|++|.+++..++.       
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLA-----EGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999     8999999999754210    012357889999999988777665       


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      .+|.++|+++......      ++.+..+++|+.++.++++++....   ..-.+++++||...      .++.      
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~------~~~~------  147 (257)
T PRK07067         80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAG------RRGE------  147 (257)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHh------CCCC------
Confidence            3577888876432111      1456678999999999999886531   11235666664210      1110      


Q ss_pred             CCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          165 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                            +  +.  ..|+.     +.+...+.  ....|+++++++|+.|+++.......   .+........  +.....
T Consensus       148 ------~--~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~---~~~~~~~~~~--~~~~~~  212 (257)
T PRK07067        148 ------A--LV--SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDA---LFARYENRPP--GEKKRL  212 (257)
T ss_pred             ------C--CC--chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhh---hhhhccCCCH--HHHHHH
Confidence                  0  11  12443     22222222  13568999999999999842111000   0000000000  000000


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  282 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~  282 (397)
                      .+.......   ..+..++|.++++++....  ..|++|++.+|..+
T Consensus       213 ~~~~~~~~~---~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        213 VGEAVPLGR---MGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HhhcCCCCC---ccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            111111222   3344556777777765432  35899999887554

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.54  E-value=4.6e-13  Score=123.43  Aligned_cols=157  Identities=14%  Similarity=0.078  Sum_probs=102.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ++++||||||+|+||+++++.|++     +|++|++++|++...         .....++.++.+|++|++++.. +.  
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~   75 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAK-----KGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLV   75 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHH
Confidence            457899999999999999999998     899999999975421         0012468899999999988765 43  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           .+|.|+|+++......      +.....+++|+.++.++++++...  ..+..+++++||...      .+|.  
T Consensus        76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~------~~~~--  147 (280)
T PRK06914         76 LKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG------RVGF--  147 (280)
T ss_pred             HHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc------cCCC--
Confidence                 3466888876433211      134556789999998888876432  123467777764211      1221  


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                                  .+...  |+.     +.++..+.  ....|++++++||+.+.++
T Consensus       148 ------------~~~~~--Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  189 (280)
T PRK06914        148 ------------PGLSP--YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTN  189 (280)
T ss_pred             ------------CCCch--hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccc
Confidence                        01111  442     33333321  1346899999999998874

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2.4e-13  Score=123.82  Aligned_cols=215  Identities=15%  Similarity=0.124  Sum_probs=129.7

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++.++|++|||||+|+||++++++|++     .|++|+++.|+.....        .....+.++.+|++|.+++.++++
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   79 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAA-----HGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVA   79 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            345678999999999999999999998     8999988877532110        012457889999999988877665


Q ss_pred             c-------CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCC--CcceEEEecCCccccccccccCC
Q 015961           94 Q-------LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAP--NLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 ~-------~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~--~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                      .       +|.|+|+|+.....      .+..+..+++|+.++.++++++.....  .-.+++.+++..       .+.+
T Consensus        80 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~-------~~~~  152 (258)
T PRK09134         80 RASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQR-------VWNL  152 (258)
T ss_pred             HHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchh-------hcCC
Confidence            3       57788887643211      113466789999999999998876421  123444443211       1110


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHHhcC--CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVEKK--EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~~~--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                                    .|. ...|+..|     +...+. ++  .++.++.++|+.+.......    ...+   ....+  
T Consensus       153 --------------~p~-~~~Y~~sK~a~~~~~~~la-~~~~~~i~v~~i~PG~v~t~~~~~----~~~~---~~~~~--  207 (258)
T PRK09134        153 --------------NPD-FLSYTLSKAALWTATRTLA-QALAPRIRVNAIGPGPTLPSGRQS----PEDF---ARQHA--  207 (258)
T ss_pred             --------------CCC-chHHHHHHHHHHHHHHHHH-HHhcCCcEEEEeecccccCCcccC----hHHH---HHHHh--
Confidence                          011 11255433     222222 21  23899999999887621110    1111   11011  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehH
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWK  285 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~  285 (397)
                      ..+   .+         ...++.++|.++++++..+...|+.|++.++..++|.
T Consensus       208 ~~~---~~---------~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        208 ATP---LG---------RGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             cCC---CC---------CCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence            111   11         1134556688888877766667889999887766654

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.5e-13  Score=123.10  Aligned_cols=156  Identities=15%  Similarity=0.129  Sum_probs=103.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +|++|||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.+++.++++     
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAA-----AGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999998     899999999864321      0 011357788999999998877665     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.|+|+|+......      +.....+++|+.++.++++++...  .....+|+++||...|.+            
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~------------  152 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ------------  152 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC------------
Confidence              4577888876532211      133456789999999998887532  122456777775332211            


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                      .+        ....  |+.     +.++..+..  ...|++++++||+.+..
T Consensus       153 ~~--------~~~~--Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t  194 (274)
T PRK07775        153 RP--------HMGA--YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLT  194 (274)
T ss_pred             CC--------Ccch--HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccC
Confidence            00        1112  443     444433321  23589999999988754

>PRK06128 oxidoreductase; Provisional

Probab=99.52  E-value=1.2e-12  Score=121.95  Aligned_cols=213  Identities=13%  Similarity=0.041  Sum_probs=127.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      +|+||||||+|+||++++++|++     .|++|++..|+....        . ....++.++.+|++|.+++.+++.   
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~-----~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAR-----EGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHH-----cCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            48999999999999999999998     899998877653211        0 012356788999999987766654   


Q ss_pred             ----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          .+|.++|+|+......       ++....+++|+.++.++++++...-..-.+++++||...|...          
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~----------  199 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS----------  199 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC----------
Confidence                4677888877432111       1456788999999999999987642222467777653332110          


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                        +        .  ...|+.     +.+...+.  ....|+++.+++|+.|.++-..........+..   ..  ...|+
T Consensus       200 --~--------~--~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~---~~--~~~p~  262 (300)
T PRK06128        200 --P--------T--LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPD---FG--SETPM  262 (300)
T ss_pred             --C--------C--chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHH---Hh--cCCCC
Confidence              0        0  111443     32222222  134689999999999998421111000011100   00  01121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  282 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~  282 (397)
                                  ....+.+++|..+++++....  ..|++|++.+|..+
T Consensus       263 ------------~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        263 ------------KRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             ------------CCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence                        112244556777776665432  34789999877543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.52  E-value=2.8e-13  Score=123.38  Aligned_cols=158  Identities=9%  Similarity=-0.006  Sum_probs=102.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      |+|+||||||+|+||.+++++|++     +|++|++++|+....      .   .....+.++.+|++|.+++..++.  
T Consensus         1 m~k~ilItG~~~~IG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   75 (259)
T PRK12384          1 MNQVAVVIGGGQTLGAFLCHGLAE-----EGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGV   75 (259)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999998     899999999875321      0   011357899999999987766554  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           .+|.|+|+|+......      ++....+++|+.++.++++++.+.  ..+ -.+++++||..      ..+|. 
T Consensus        76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~------~~~~~-  148 (259)
T PRK12384         76 DEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS------GKVGS-  148 (259)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc------cccCC-
Confidence                 3577899876433211      134566799999988877777543  112 23666665321      12221 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                           +        .  ...|+..|     ++..+.  ....|+++.++||+.+++.
T Consensus       149 -----~--------~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~  190 (259)
T PRK12384        149 -----K--------H--NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKS  190 (259)
T ss_pred             -----C--------C--CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence                 0        0  11144322     222221  1357899999999999873

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.51  E-value=4e-13  Score=120.62  Aligned_cols=156  Identities=16%  Similarity=0.079  Sum_probs=105.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      +|+||||||+|+||++++++|++     +|++|++++|++...     .....+++++.+|+.|.+++..+++       
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAA-----RGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHH-----CCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            57999999999999999999998     899999999975431     1112357788999999988776665       


Q ss_pred             cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      ++|.|+|+++.....    .  +...+.+++|+.++.++++++.+.  ..+..+++++||...|       +.     . 
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-----~-  148 (239)
T PRK12828         82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAAL-------KA-----G-  148 (239)
T ss_pred             CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhc-------cC-----C-
Confidence            467788987642111    0  123456789999999998887542  1236788877753322       11     0 


Q ss_pred             CCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          166 FTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                           +  +  ...|+.     +.++....  ....++++.++||+.+++
T Consensus       149 -----~--~--~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~  189 (239)
T PRK12828        149 -----P--G--MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDT  189 (239)
T ss_pred             -----C--C--cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence                 0  1  111433     23333222  134689999999999998

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.50  E-value=3.6e-13  Score=126.76  Aligned_cols=121  Identities=12%  Similarity=0.052  Sum_probs=88.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      ++++||||||+|+||.+++++|++     .|++|++++|+....      . .....+.++.+|++|.+++.++++.   
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAK-----RGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            457899999999999999999998     899999999975321      1 1123578899999999988776653   


Q ss_pred             ----CCCeeEEEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCcccc
Q 015961           95 ----LTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYL  150 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~  150 (397)
                          +|.++|.|+.....    .   +..+..+++|+.|+.++++++...    .....+++++||..++.
T Consensus        80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~  150 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP  150 (322)
T ss_pred             hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence                67788887743211    1   145667899999999988877653    11134788888766553

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3.6e-13  Score=123.50  Aligned_cols=156  Identities=20%  Similarity=0.186  Sum_probs=107.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc-------CCCe
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTDV   98 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-------~~~V   98 (397)
                      +++|+||||||+||++++++|++     +|++|++++|++.... ...+++++++|++|++++..+++.       +|.+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLAR-----AGYRVFGTSRNPARAA-PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCChhhcc-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46899999999999999999998     8999999999764432 225788999999999988887764       5778


Q ss_pred             eEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus        99 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      +|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.            ..      
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------~~------  139 (270)
T PRK06179         78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL------------PA------  139 (270)
T ss_pred             EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC------------CC------
Confidence            88876532211      134677899999999988876432  12356788777532111            00      


Q ss_pred             CCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          171 PRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       171 p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                         |. ...|+.     +.+.....  .+..|+++++++|+.+.++
T Consensus       140 ---~~-~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~  181 (270)
T PRK06179        140 ---PY-MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTN  181 (270)
T ss_pred             ---CC-ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccc
Confidence               10 111442     32222211  1456899999999998874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.50  E-value=5.3e-13  Score=121.28  Aligned_cols=215  Identities=15%  Similarity=0.086  Sum_probs=129.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      .. ...++.++.+|++|.+++..++..   
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQ-----AGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            458999999999999999999998     899999999975321      00 113477899999999888777654   


Q ss_pred             ----CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          .|.|+|+++......      +..+..+++|+.++.++++++.+.  .....+++++||...+             
T Consensus        84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-------------  150 (255)
T PRK07523         84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA-------------  150 (255)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc-------------
Confidence                567888876432111      123556789999999999988754  1124577777642111             


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                       .+.    +  .  ...|+.     +.+...+..  ..+|+++.++||+.+.++.-..... ...+..  .+.+  ..|+
T Consensus       151 -~~~----~--~--~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~--~~~~--~~~~  216 (255)
T PRK07523        151 -LAR----P--G--IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSA--WLEK--RTPA  216 (255)
T ss_pred             -cCC----C--C--CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHH--HHHh--cCCC
Confidence             000    0  1  112443     333333221  3568999999999998832111000 001100  0111  1121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  283 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s  283 (397)
                                  .......++|.++++++...  ...|+++++.++...|
T Consensus       217 ------------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        217 ------------GRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             ------------CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence                        11224556677777776542  2347889988776544

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.49  E-value=1.3e-12  Score=119.01  Aligned_cols=156  Identities=13%  Similarity=0.023  Sum_probs=99.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      ++|++|||||+|+||++++++|++     +|++|++++|+....     . .....+.++.+|++|.+++.++++     
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAA-----EGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999998     899999999974211     0 012356788999999887766554     


Q ss_pred             --cCCCeeEEEEeccc--C-----CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 --QLTDVTHIFYVTWT--N-----RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 --~~~~V~h~a~~~~~--~-----~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                        .+|.++|.|+....  +     ..+....+++|+.++..+++++...  ..+..+++++||...|       +.    
T Consensus        82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~----  150 (260)
T PRK12823         82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR-------GI----  150 (260)
T ss_pred             cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc-------CC----
Confidence              45778888763211  1     1134556788998877665555432  1123567777653222       10    


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                                 +...  |+.     +.+...+.  ....|+++.+++|+.|+++
T Consensus       151 -----------~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  191 (260)
T PRK12823        151 -----------NRVP--YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP  191 (260)
T ss_pred             -----------CCCc--cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence                       0011  443     33333222  1345899999999999984

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.49  E-value=3.2e-13  Score=122.37  Aligned_cols=213  Identities=11%  Similarity=-0.012  Sum_probs=126.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +++||||||+|+||++++++|++     +|++|++..|+.....        .....+.++.+|+++.+++..+++    
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAK-----EGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            47999999999999999999998     8999888776432110        011245688999999987766654    


Q ss_pred             ---cCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                         .+|.|+|+|+......    +  ..+..+++|+.++.++++++.+.-....+++++||...|       .+      
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~------  147 (252)
T PRK06077         81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI-------RP------  147 (252)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc-------CC------
Confidence               4677999887532211    1  124567999999999999887652223467766643222       11      


Q ss_pred             CCCCCCCCCCCCCcchhH-----HHHHHHHHhcC--CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          165 PFTEDMPRLDAPNFYYTL-----EDILFEEVEKK--EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                             ..+.  ..|+.     +.+...+. ++  .++.+.+++|+.+.++.......... ..     .+.....+. 
T Consensus       148 -------~~~~--~~Y~~sK~~~~~~~~~l~-~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~-~~-----~~~~~~~~~-  210 (252)
T PRK06077        148 -------AYGL--SIYGAMKAAVINLTKYLA-LELAPKIRVNAIAPGFVKTKLGESLFKVLG-MS-----EKEFAEKFT-  210 (252)
T ss_pred             -------CCCc--hHHHHHHHHHHHHHHHHH-HHHhcCCEEEEEeeCCccChHHHhhhhccc-cc-----HHHHHHhcC-
Confidence                   0111  12553     33333332 22  26899999999998731100000000 00     000000000 


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCe
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV  281 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~  281 (397)
                              ......+..++|+++++++..+...|++||+.++..
T Consensus       211 --------~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        211 --------LMGKILDPEEVAEFVAAILKIESITGQVFVLDSGES  246 (252)
T ss_pred             --------cCCCCCCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence                    011234455568888887766666789999998753

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.49  E-value=6.8e-13  Score=120.10  Aligned_cols=157  Identities=11%  Similarity=0.071  Sum_probs=104.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +++||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.+++++++.     
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   77 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAE-----EGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA   77 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999     899999999875321      0 012358899999999988877665     


Q ss_pred             --cCCCeeEEEEecccCC---C---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.|+|+++......   .   ..+..+++|+.++.++++++...  ..+..+++++||...|.+.          .
T Consensus        78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~----------~  147 (250)
T TIGR03206        78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS----------S  147 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC----------C
Confidence              3677888876422111   1   23556899999999988877532  1234678877754332110          0


Q ss_pred             CCCCCCCCCCCCCCcchhHHH-----HHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                                .  ...|+..|     +...+..  ...+++++++||+.++++
T Consensus       148 ----------~--~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~  188 (250)
T TIGR03206       148 ----------G--EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTA  188 (250)
T ss_pred             ----------C--CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccch
Confidence                      0  01144322     2222221  234799999999999984

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.6e-12  Score=116.11  Aligned_cols=164  Identities=12%  Similarity=0.053  Sum_probs=102.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      |++++|||||+|+||++++++|++     +|++|+...++....       .. ...++.++.+|++|.+++.+++.   
T Consensus         1 ~~~~~lVtG~~~~iG~~~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06123          1 MRKVMIITGASRGIGAATALLAAE-----RGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVD   75 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            567899999999999999999998     798887776443211       00 11356789999999988877665   


Q ss_pred             ----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccC-----CCcceEEEecCCccccccccccC
Q 015961           94 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA-----PNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~-----~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                          .+|.|+|+++......       ++....+++|+.++.++++++.+.-     .+-.+++++||...      .++
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~------~~~  149 (248)
T PRK06123         76 RELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAA------RLG  149 (248)
T ss_pred             HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhh------cCC
Confidence                4577899876532211       1345678999999999888876531     11235666654211      222


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                      .    ..    .  .........+.+.++..+.  ....+++++++||+.++++
T Consensus       150 ~----~~----~--~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~  193 (248)
T PRK06123        150 S----PG----E--YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTE  193 (248)
T ss_pred             C----CC----C--ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCc
Confidence            1    00    0  0000111122244333332  1345899999999999994

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.48  E-value=2.5e-12  Score=116.00  Aligned_cols=115  Identities=19%  Similarity=0.087  Sum_probs=84.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +++||||||||+||++++++|++     +|++|+++.|+....       . ....++.++.+|++|.+++.++++    
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAA-----QGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            37899999999999999999998     899998888865421       0 112467789999999988777665    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                         .+|.|+|+++......      +.....+++|+.++.++++++...  .....+++++|+
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss  142 (248)
T PRK05557         80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS  142 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence               4677899876432211      134556789999999999888754  122456777764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.48  E-value=1.7e-12  Score=117.36  Aligned_cols=158  Identities=18%  Similarity=0.092  Sum_probs=104.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++++||||||+|+||++++++|++     +|++|++++|......           .....+.++.+|+.|.+++...++
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAA-----DGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            457999999999999999999998     8999999877432110           012357889999999988777663


Q ss_pred             -------cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHc-cc--CCCcceEEEecCCccccccccccC
Q 015961           94 -------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVI-PN--APNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~-~~--~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                             .+|.|+|+++.....  .    ++....+++|+.++.++++++. ..  .....+++++||...+.      +
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------~  153 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR------G  153 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC------C
Confidence                   467799987643211  1    1345677999999999999987 21  12356777776533221      1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                      .              .+  ...|+.     +.+...+.  ....+++++++||+.+.++
T Consensus       154 ~--------------~~--~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~  196 (249)
T PRK12827        154 N--------------RG--QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTP  196 (249)
T ss_pred             C--------------CC--CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCC
Confidence            0              01  111443     22222221  1335899999999999983

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.48  E-value=1e-12  Score=118.92  Aligned_cols=212  Identities=11%  Similarity=0.014  Sum_probs=125.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      ++++|||||+|+||++++++|++     .|++|+++ .|+....      . ....++.++.+|++|++++..+++.   
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~-----~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAE-----EGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE   78 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999     89998764 5654221      0 0123578899999999988776653   


Q ss_pred             ----CCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ----LTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          +|.|+|.++......  +    .....+++|+.++.++++++....  .+..+|+++||...+.      +     
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------~-----  147 (250)
T PRK08063         79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR------Y-----  147 (250)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc------C-----
Confidence                577888876432111  1    223457899999999998887541  2345788777532110      0     


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                               ..+..  .|+.     +.++..+..  ...++++++++|+.+..+........ ..+  ......  ..+ 
T Consensus       148 ---------~~~~~--~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-~~~--~~~~~~--~~~-  210 (250)
T PRK08063        148 ---------LENYT--TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-EEL--LEDARA--KTP-  210 (250)
T ss_pred             ---------CCCcc--HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-hHH--HHHHhc--CCC-
Confidence                     00111  1443     344333221  24689999999999987321111100 001  000000  111 


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCe
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV  281 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~  281 (397)
                                 .....+..++|+.+++++..+.  ..|+.+++.++..
T Consensus       211 -----------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        211 -----------AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             -----------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence                       0123445666888877765433  3478888877654

>PRK09186 flagellin modification protein A; Provisional

Probab=99.48  E-value=6.5e-13  Score=120.70  Aligned_cols=166  Identities=13%  Similarity=0.075  Sum_probs=103.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      .+|+||||||+|+||.+++++|++     +|++|++++|++...         ......+.++.+|++|++++.+++.. 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~-----~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILE-----AGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKS   77 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHH
Confidence            358999999999999999999998     899999999875431         01123466789999999888777654 


Q ss_pred             ------CCCeeEEEEeccc-------CC--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961           95 ------LTDVTHIFYVTWT-------NR--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        95 ------~~~V~h~a~~~~~-------~~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                            +|.|+|+|+....       ..  +.....+++|+.++..+++++...  ..+..+++++||...+.      +
T Consensus        78 ~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------~  151 (256)
T PRK09186         78 AEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV------A  151 (256)
T ss_pred             HHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc------c
Confidence                  6778888753211       01  124556788888877666655432  11245778777533221      1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhHHH-----HHH---HHHhcCCCeeEEEEcCCceee
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTLED-----ILF---EEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~---~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      +    .....+..+.....  .|+..|     +..   ... ...++++++++|+.+++
T Consensus       152 ~----~~~~~~~~~~~~~~--~Y~~sK~a~~~l~~~la~e~-~~~~i~v~~i~Pg~~~~  203 (256)
T PRK09186        152 P----KFEIYEGTSMTSPV--EYAAIKAGIIHLTKYLAKYF-KDSNIRVNCVSPGGILD  203 (256)
T ss_pred             c----cchhccccccCCcc--hhHHHHHHHHHHHHHHHHHh-CcCCeEEEEEecccccC
Confidence            1    11112222221111  255332     222   221 35679999999998876

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.48  E-value=1.1e-12  Score=118.60  Aligned_cols=208  Identities=19%  Similarity=0.142  Sum_probs=124.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      ++++|||||+|+||++++++|++     +|++|+++.++....       . ....++.++.+|++|++++.++++.   
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQ-----EGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999998     899998776543211       0 0113578899999999988777665   


Q ss_pred             ----CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          +|.|+|+++......      ....+.+++|+.++.++++++...  .....+++++||...+      ++.    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~~----  150 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ------AGG----  150 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc------CCC----
Confidence                577889876532211      245667899999999999988653  1123467766642211      110    


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                                .+...  |+.     +.+......  ...++++++++|+.+.++....   ......  .....  +.+ 
T Consensus       151 ----------~~~~~--Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~--~~~~~--~~~-  210 (247)
T PRK12935        151 ----------FGQTN--YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE---VPEEVR--QKIVA--KIP-  210 (247)
T ss_pred             ----------CCCcc--hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh---ccHHHH--HHHHH--hCC-
Confidence                      01112  443     222222210  2358999999999987631111   000010  00011  111 


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCC-CCCCceeccCC
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNG  279 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~-~~g~~yni~~~  279 (397)
                              ...+.   +..++++++++++.... ..|++||+.++
T Consensus       211 --------~~~~~---~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        211 --------KKRFG---QADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             --------CCCCc---CHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence                    01222   44555777777764422 46789999876

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.47  E-value=1.1e-12  Score=118.85  Aligned_cols=158  Identities=14%  Similarity=0.039  Sum_probs=103.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .+|++|||||+|+||++|+++|++     +|++|+++.|+....      .....++.++.+|++|++++.++++     
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAR-----EGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHH-----CCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999999975321      1012357889999999998877665     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.|+|+++......      +.....+++|+.++.++.+++...  .....+++++||...      .+|.     
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~------~~~~-----  147 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLA------LAGG-----  147 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhh------ccCC-----
Confidence              4677889877432111      134556889999997776665432  112467777764321      1121     


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                               ..  ...|+.     +.++..+..  ...+++++++||+.++++
T Consensus       148 ---------~~--~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  189 (252)
T PRK06138        148 ---------RG--RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTP  189 (252)
T ss_pred             ---------CC--ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCc
Confidence                     00  111442     333333221  345899999999999884

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.46  E-value=7.6e-13  Score=120.31  Aligned_cols=116  Identities=11%  Similarity=0.011  Sum_probs=83.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc-cCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS-QLT   96 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~-~~~   96 (397)
                      |+++||||||||+||++++++|++     .|++|++++|++...       .....++.++.+|++|++++..++. ++|
T Consensus         1 m~~~vlVtGasg~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id   75 (257)
T PRK09291          1 MSKTILITGAGSGFGREVALRLAR-----KGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVD   75 (257)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence            567999999999999999999998     899999999975321       0012357899999999999988876 688


Q ss_pred             CeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           97 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        97 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      .|+|+|+......      +.....+++|+.++.++.+++...  ..+..+++++||
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS  132 (257)
T PRK09291         76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSS  132 (257)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcC
Confidence            8999876432111      123456788999877666544321  112467887774

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.46  E-value=5e-12  Score=113.22  Aligned_cols=152  Identities=17%  Similarity=0.178  Sum_probs=101.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc------cCCCee
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS------QLTDVT   99 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~------~~~~V~   99 (397)
                      +|+||||||+|+||.+++++|++     +|++|+++.|++....    ..+++.+|++|.+++..++.      ++|.|+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi   73 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLAN-----LGHQVIGIARSAIDDF----PGELFACDLADIEQTAATLAQINEIHPVDAIV   73 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEeCCccccc----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEE
Confidence            47899999999999999999998     8999999999865422    23678999999988776665      467799


Q ss_pred             EEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus       100 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      |+++......      ++....+++|+.++.++.+++...  ..+..+++++||...|       +.      +      
T Consensus        74 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~------~------  134 (234)
T PRK07577         74 NNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF-------GA------L------  134 (234)
T ss_pred             ECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc-------CC------C------
Confidence            9876532211      134556789999988877666432  1124577777753322       21      0      


Q ss_pred             CCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          172 RLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                        ....  |+.     +.+...+.  ....|++++++||+.+..+
T Consensus       135 --~~~~--Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~  175 (234)
T PRK07577        135 --DRTS--YSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETE  175 (234)
T ss_pred             --CchH--HHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCc
Confidence              0012  443     22222211  1346899999999998873

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.46  E-value=5.2e-13  Score=121.47  Aligned_cols=158  Identities=13%  Similarity=0.059  Sum_probs=105.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|.+++..++.    
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAAR-----AGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE   78 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999999975321      0 012357889999999988766554    


Q ss_pred             ---cCCCeeEEEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         .+|.|+|+|+.....    .   +.....+++|+.++..+++++... .....+++++||...+       .     
T Consensus        79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~-------~-----  146 (258)
T PRK07890         79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLR-------H-----  146 (258)
T ss_pred             HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhc-------c-----
Confidence               457789987642211    1   144667899999999999988753 1112467776642211       1     


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                        +      ..+...  |+.     +.++..+..  ...++++.++||+.++++
T Consensus       147 --~------~~~~~~--Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~  190 (258)
T PRK07890        147 --S------QPKYGA--YKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGD  190 (258)
T ss_pred             --C------CCCcch--hHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcH
Confidence              0      001111  442     333333221  345799999999999994

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.45  E-value=8.6e-13  Score=120.06  Aligned_cols=157  Identities=15%  Similarity=0.016  Sum_probs=102.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      |+++||||||+|+||.+++++|++     +|++|++++|+....      .....++.++.+|++|++++.++++.    
T Consensus         1 ~~~~vlItGas~gIG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   75 (257)
T PRK07024          1 MPLKVFITGASSGIGQALAREYAR-----QGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA   75 (257)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh
Confidence            457999999999999999999998     899999999875321      11112678999999999888776543    


Q ss_pred             ---CCCeeEEEEecccC---C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ---LTDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         +|.++|.++.....   .    +.....+++|+.|+.++++++...  ..+..+++.+||...+      ++.    
T Consensus        76 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~------~~~----  145 (257)
T PRK07024         76 HGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV------RGL----  145 (257)
T ss_pred             CCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc------CCC----
Confidence               57788887643211   1    134667899999998877744221  1123567766642211      110    


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                                 |. ...|+.     +.+...+.  .+..|++++++||+.|.+
T Consensus       146 -----------~~-~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  186 (257)
T PRK07024        146 -----------PG-AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRT  186 (257)
T ss_pred             -----------CC-CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcC
Confidence                       10 112543     22222211  145689999999999987

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.45  E-value=1.6e-12  Score=117.75  Aligned_cols=116  Identities=17%  Similarity=0.111  Sum_probs=84.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ-----   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~-----   94 (397)
                      +++||||||+|+||.+++++|++     +|++|++++|++...      .....++.++.+|++|++++..+++.     
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAA-----EGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            47899999999999999999998     899999999986421      00113477999999999988777653     


Q ss_pred             --CCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCC
Q 015961           95 --LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT  146 (397)
Q Consensus        95 --~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~  146 (397)
                        +|.|+|+++......       +.....+++|+.++.++++.+...  ..+..+|+++||.
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  142 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAST  142 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCh
Confidence              577888876422111       134567899999987777766543  1235677777653

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.45  E-value=6.9e-13  Score=122.09  Aligned_cols=156  Identities=17%  Similarity=0.150  Sum_probs=102.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHcc--------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--------   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~--------   94 (397)
                      .|+++||||||+|+||.+++++|.+     +|++|++++|++... .....+++++.+|++|.+++..+++.        
T Consensus         2 ~~~k~vlItGasggiG~~la~~l~~-----~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          2 DMKRSILITGCSSGIGAYCARALQS-----DGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999998     899999999976431 01123678899999999877666543        


Q ss_pred             CCCeeEEEEecccCC--C----cHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNR--S----TEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~--~----~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      +|.++|+|+......  +    .....+++|+.|    ++++++.+++.+  ..+++++||..         |..     
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--~g~iv~isS~~---------~~~-----  140 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--QGRIVQCSSIL---------GLV-----  140 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--CCEEEEECChh---------hcC-----
Confidence            466888765432211  1    235578999999    566666666543  45788776522         210     


Q ss_pred             CCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                      +      ...  ...|+.     +.+...+.  .+..|+++++++|+.|-.
T Consensus       141 ~------~~~--~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T  183 (277)
T PRK05993        141 P------MKY--RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIET  183 (277)
T ss_pred             C------CCc--cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccC
Confidence            0      001  112553     22222211  145789999999998865

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.1e-12  Score=116.48  Aligned_cols=158  Identities=15%  Similarity=0.093  Sum_probs=105.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHcc---CCCee
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVT   99 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V~   99 (397)
                      .+++++||||+|+||+++++.|++     +|++|++++|+....  .....+..++.+|++|.+++..+++.   +|.|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQ-----RGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            357999999999999999999998     899999999975321  10112467889999999888777764   67788


Q ss_pred             EEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus       100 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      |+++......      .+....+++|+.++.++++++.+..   ....+++++||...|.      +.    .       
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~----~-------  145 (245)
T PRK07060         83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV------GL----P-------  145 (245)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC------CC----C-------
Confidence            8876532211      1345567899999999999887541   1125677776433221      10    0       


Q ss_pred             CCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          171 PRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       171 p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                         .  ...|+.     +.+...+..  ...+++++.+||+.++++
T Consensus       146 ---~--~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~  186 (245)
T PRK07060        146 ---D--HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTP  186 (245)
T ss_pred             ---C--CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCc
Confidence               0  111442     443333321  245799999999999984

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.1e-12  Score=114.99  Aligned_cols=112  Identities=21%  Similarity=0.139  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHcc---CCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQ---LTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V   98 (397)
                      |+|+||||||+|+||++++++|++     + ++|++++|++...  . ...++++++++|++|.+++.+++..   +|.|
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~-----~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   75 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAP-----T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVL   75 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHh-----h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            357899999999999999999998     7 8999999975331  0 0113678999999999999888874   6779


Q ss_pred             eEEEEecccCC------CcHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecC
Q 015961           99 THIFYVTWTNR------STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        99 ~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                      +|+++......      ......+++|+.+    ++++++++++.   ..+++++||
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss  129 (227)
T PRK08219         76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINS  129 (227)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcc
Confidence            99876532111      1234557888888    45555555543   356676664

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.43  E-value=4.6e-12  Score=104.00  Aligned_cols=206  Identities=17%  Similarity=0.143  Sum_probs=126.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  106 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~  106 (397)
                      +||.|.||||-+|++++++.++     +||+|++++|++.+.. ..+++.+++.|+.|++.+.+.+.++|.|+...+...
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~-----RGHeVTAivRn~~K~~-~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALK-----RGHEVTAIVRNASKLA-ARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHh-----CCCeeEEEEeChHhcc-ccccceeecccccChhhhHhhhcCCceEEEeccCCC
Confidence            4799999999999999999999     8999999999876532 126788999999999999999999998887654321


Q ss_pred             cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh----H
Q 015961          107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT----L  182 (397)
Q Consensus       107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~----~  182 (397)
                         .+.+..   .....+.|++.++.++  +.+++.+.++.    |  .|-.    +...-.+.|..|.  -||.    +
T Consensus        75 ---~~~~~~---~~k~~~~li~~l~~ag--v~RllVVGGAG----S--L~id----~g~rLvD~p~fP~--ey~~~A~~~  134 (211)
T COG2910          75 ---SDNDEL---HSKSIEALIEALKGAG--VPRLLVVGGAG----S--LEID----EGTRLVDTPDFPA--EYKPEALAQ  134 (211)
T ss_pred             ---CChhHH---HHHHHHHHHHHHhhcC--CeeEEEEcCcc----c--eEEc----CCceeecCCCCch--hHHHHHHHH
Confidence               222222   2233566777777653  66666665421    1  1110    1111223343332  2343    2


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961          183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  262 (397)
Q Consensus       183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~  262 (397)
                      .+.|...- .+..++||.+-|+..+-|++... ++  .+         .+..+..-..+..   .+...|   .|.+++.
T Consensus       135 ae~L~~Lr-~~~~l~WTfvSPaa~f~PGerTg-~y--rl---------ggD~ll~n~~G~S---rIS~aD---YAiA~lD  195 (211)
T COG2910         135 AEFLDSLR-AEKSLDWTFVSPAAFFEPGERTG-NY--RL---------GGDQLLVNAKGES---RISYAD---YAIAVLD  195 (211)
T ss_pred             HHHHHHHh-hccCcceEEeCcHHhcCCccccC-ce--Ee---------ccceEEEcCCCce---eeeHHH---HHHHHHH
Confidence            44454443 45569999999999999533221 11  00         1222233223332   233333   3666666


Q ss_pred             HhcCCCCCCCceecc
Q 015961          263 AAVDPYAKNEAFNCN  277 (397)
Q Consensus       263 ~~~~~~~~g~~yni~  277 (397)
                      -.+++....+.|-+.
T Consensus       196 e~E~~~h~rqRftv~  210 (211)
T COG2910         196 ELEKPQHIRQRFTVA  210 (211)
T ss_pred             HHhcccccceeeeec
Confidence            666766666666543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.43  E-value=4e-12  Score=115.22  Aligned_cols=155  Identities=15%  Similarity=0.077  Sum_probs=104.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc-------CCCe
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTDV   98 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-------~~~V   98 (397)
                      +|++|||||+|+||++++++|++     +|++|++++|+....  ....+.++++|++|.+++.++++.       +|.|
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~-----~G~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVE-----AGAKVIGFDQAFLTQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecchhhh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999998     899999999976221  124678899999999888777654       6778


Q ss_pred             eEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus        99 ~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      +|+++.....      .++....+++|+.++.++++++...  .....+++++|+....              .+     
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~--------------~~-----  141 (252)
T PRK08220         81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH--------------VP-----  141 (252)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc--------------cC-----
Confidence            8887643211      1145667899999999999987543  1123467766642111              00     


Q ss_pred             CCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          171 PRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       171 p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                       ..+.  ..|+.     +.+...+.  ....++++.+++|+.++++
T Consensus       142 -~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~  184 (252)
T PRK08220        142 -RIGM--AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTD  184 (252)
T ss_pred             -CCCC--chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcch
Confidence             0011  11442     33332222  0246899999999999984

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.7e-12  Score=121.23  Aligned_cols=124  Identities=14%  Similarity=0.052  Sum_probs=88.6

Q ss_pred             CccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHH
Q 015961           17 EEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEE   87 (397)
Q Consensus        17 ~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~   87 (397)
                      +..+.++.++|+||||||+|+||++++++|++     .|++|++++|+....      .   .....+.++.+|+.|.++
T Consensus         7 ~~~~~~~~~~k~vlItGas~gIG~~~a~~l~~-----~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~   81 (306)
T PRK06197          7 TAADIPDQSGRVAVVTGANTGLGYETAAALAA-----KGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLAS   81 (306)
T ss_pred             CccccccCCCCEEEEcCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHH
Confidence            33345666778999999999999999999998     899999999974321      0   012357889999999988


Q ss_pred             HHHHHc-------cCCCeeEEEEecccCC----CcHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecCCc
Q 015961           88 TQAKLS-------QLTDVTHIFYVTWTNR----STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTK  147 (397)
Q Consensus        88 l~~~~~-------~~~~V~h~a~~~~~~~----~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~  147 (397)
                      +..++.       .+|.|+|+|+......    +..+..+++|+.|    ++.+++.+++.+  ..+++++||..
T Consensus        82 v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~  154 (306)
T PRK06197         82 VRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGG  154 (306)
T ss_pred             HHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHH
Confidence            776654       3677888877533221    2345678999999    566666665432  35778777654

>PRK06196 oxidoreductase; Provisional

Probab=99.43  E-value=1.5e-12  Score=122.11  Aligned_cols=169  Identities=17%  Similarity=0.015  Sum_probs=105.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      ++|+||||||||+||.+++++|++     .|++|++++|+.....   ....++.++.+|++|.+++++++.       .
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~-----~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQ-----AGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            458999999999999999999998     8999999999754210   011247899999999988776653       4


Q ss_pred             CCCeeEEEEecccCC----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  168 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E  168 (397)
                      +|.++|.|+......    +..+..+++|+.++.++++++...  .....+++++||...+.      +.... .. ...
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~------~~~~~-~~-~~~  171 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRR------SPIRW-DD-PHF  171 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhcc------CCCCc-cc-cCc
Confidence            677888876432211    134667899999976665544322  11235777777543221      11000 00 000


Q ss_pred             CCCCCCCCCcchhHHHHH--------HHHHhcCCCeeEEEEcCCceeec
Q 015961          169 DMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       169 ~~p~~~~~~~~y~~e~~l--------~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                      ..+..+  ...|+..|..        +... ...|+++++++|+.|.++
T Consensus       172 ~~~~~~--~~~Y~~SK~a~~~~~~~la~~~-~~~gi~v~~v~PG~v~t~  217 (315)
T PRK06196        172 TRGYDK--WLAYGQSKTANALFAVHLDKLG-KDQGVRAFSVHPGGILTP  217 (315)
T ss_pred             cCCCCh--HHHHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeCCcccCC
Confidence            111111  1236643332        2222 456899999999999884

>PRK06194 hypothetical protein; Provisional

Probab=99.42  E-value=3.3e-12  Score=118.15  Aligned_cols=115  Identities=18%  Similarity=0.011  Sum_probs=82.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      +++||||||+|+||++++++|++     +|++|++++|+....      .. ...++.++.+|++|.+++.++++.    
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAA-----LGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998     899999999864321      00 123567799999999988777764    


Q ss_pred             ---CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHc----ccCC----CcceEEEecC
Q 015961           95 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVI----PNAP----NLRHVCLQTG  145 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~----~~~~----~~~~~~~~s~  145 (397)
                         +|.|+|+|+......      ++....+++|+.|+.++++++.    +...    ...+++++||
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  148 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTAS  148 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCC
Confidence               688999987643211      1345568899999999776643    2221    1246777664

>PRK06182 short chain dehydrogenase; Validated

Probab=99.42  E-value=1.3e-12  Score=119.95  Aligned_cols=154  Identities=19%  Similarity=0.112  Sum_probs=102.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHc-------cCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-------QLTD   97 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~   97 (397)
                      +++|+||||+|+||++++++|++     +|++|++++|+..... ....+++++.+|++|.+++..+++       ++|.
T Consensus         3 ~k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAA-----QGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47899999999999999999998     8999999999754210 011358899999999998877775       5677


Q ss_pred             eeEEEEecccCC------CcHHHHHHhHHHHHH----HHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTNR------STEAENCKINGSMFR----NVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        98 V~h~a~~~~~~~------~~~~~~~~~nv~gt~----~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      ++|+|+......      ++.+..+++|+.++.    .++..+++.+  ..+++++||...+     .       ..   
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~~~-----~-------~~---  140 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--SGRIINISSMGGK-----I-------YT---  140 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcchhhc-----C-------CC---
Confidence            888876532211      145667889998854    4445555432  4577777642111     0       00   


Q ss_pred             CCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeec
Q 015961          168 EDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                            +.. ..|+..|.        ++... ...|++++++||+.+..+
T Consensus       141 ------~~~-~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t~  182 (273)
T PRK06182        141 ------PLG-AWYHATKFALEGFSDALRLEV-APFGIDVVVIEPGGIKTE  182 (273)
T ss_pred             ------CCc-cHhHHHHHHHHHHHHHHHHHh-cccCCEEEEEecCCcccc
Confidence                  111 11443222        22222 456899999999999873

>PRK08264 short chain dehydrogenase; Validated

Probab=99.42  E-value=3.8e-12  Score=114.34  Aligned_cols=157  Identities=18%  Similarity=0.073  Sum_probs=105.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc---CCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V~h  100 (397)
                      ++++||||||+|+||++++++|++     .|+ +|++++|++........++.++.+|+.|.+++.++++.   +|.|+|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~-----~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLA-----RGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            347899999999999999999998     898 89999997654221224688999999999988887764   567888


Q ss_pred             EEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961          101 IFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus       101 ~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      .++.....    .   ++....+++|+.++.++++++...  .....+++++||...+..            .       
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~------------~-------  140 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN------------F-------  140 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC------------C-------
Confidence            87642211    1   134567889999999999987643  112456776664322210            0       


Q ss_pred             CCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          172 RLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                        + ....|+.     +.+...+.  ....+++++++||+.+.+
T Consensus       141 --~-~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t  181 (238)
T PRK08264        141 --P-NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDT  181 (238)
T ss_pred             --C-CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccc
Confidence              0 0112443     33332221  134589999999998876

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=1.1e-11  Score=111.86  Aligned_cols=117  Identities=15%  Similarity=0.106  Sum_probs=85.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .|+++||||||||+||.+++++|++     .|++|+++ +|++...      . ....++.++.+|++|++++.+++.  
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~-----~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAK-----EGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQI   77 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            3567999999999999999999998     89999988 8865321      0 012357889999999998877665  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                           .+|.|+|.++......      +..+..+++|+.++.++++++...  ..+..+++++||
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS  142 (247)
T PRK05565         78 VEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISS  142 (247)
T ss_pred             HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence                 5788999876532111      134567889999988888877653  122456777764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.41  E-value=1.7e-11  Score=113.48  Aligned_cols=157  Identities=14%  Similarity=0.123  Sum_probs=104.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|+||||||+|+||.+++++|++     .|++|++++|+....       . ....++.++.+|++|.+.+.++++    
T Consensus        46 ~k~iLItGasggIG~~la~~l~~-----~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAK-----EGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            57899999999999999999998     899999999875321       0 011357789999999988777664    


Q ss_pred             ---cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                         .+|.|+|+|+......       +.....+++|+.++.++++++...-....+++++||...|...           
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~-----------  189 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN-----------  189 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC-----------
Confidence               4677889877532211       1335678999999999999987641112467777654333110           


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                       +      .  ...  |+.     +.+...+..  ...|++++.++|+.++.+
T Consensus       190 -~------~--~~~--Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~  231 (290)
T PRK06701        190 -E------T--LID--YSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTP  231 (290)
T ss_pred             -C------C--cch--hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCc
Confidence             0      0  011  432     222222221  235899999999999873

>PLN02253 xanthoxin dehydrogenase

Probab=99.41  E-value=8.2e-12  Score=115.10  Aligned_cols=158  Identities=15%  Similarity=0.066  Sum_probs=104.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      ++|++|||||+|+||++++++|++     .|++|++++|+....      .....++.++++|++|.+++.+++.     
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHK-----HGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            457899999999999999999998     899999999864321      1112367899999999988877665     


Q ss_pred             --cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                        .+|.++|+|+......        ++....+++|+.++.++++++....  ..-.++++++|..      ..++.   
T Consensus        92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~------~~~~~---  162 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVA------SAIGG---  162 (280)
T ss_pred             hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChh------hcccC---
Confidence              5788999887532110        1356678999999999988776431  1123455554311      11221   


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                                  +. ...|+.     +.+...+..  ...++++..++|+.+..+
T Consensus       163 ------------~~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~  204 (280)
T PLN02253        163 ------------LG-PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA  204 (280)
T ss_pred             ------------CC-CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence                        00 011443     333333221  245799999999998773

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.40  E-value=1.1e-11  Score=111.79  Aligned_cols=158  Identities=15%  Similarity=0.139  Sum_probs=102.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      |.|+||||||+|+||++++++|.+     +|++|++++|+....       . ....++.++.+|++|.+++.++++.  
T Consensus         1 ~~k~vlItG~s~~iG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (245)
T PRK12824          1 MKKIALVTGAKRGIGSAIARELLN-----DGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIE   75 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            457899999999999999999998     799999999874211       0 0123578999999999887776643  


Q ss_pred             -----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           95 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        95 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                           +|.++|+++.....      .+..+..+++|+.++.++.+++.+.  .....+++++||...+..          
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~----------  145 (245)
T PRK12824         76 EEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG----------  145 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC----------
Confidence                 56688876542211      1134567789999988886655321  123567887774322210          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                        .      +  ..+.  |...|     +...+.  ....++++++++|+.+.++
T Consensus       146 --~------~--~~~~--Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  188 (245)
T PRK12824        146 --Q------F--GQTN--YSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATP  188 (245)
T ss_pred             --C------C--CChH--HHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCc
Confidence              0      0  0111  54333     222221  1345799999999999873

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.40  E-value=7.4e-12  Score=115.07  Aligned_cols=156  Identities=15%  Similarity=0.005  Sum_probs=103.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      ++|++|||||+|+||++++++|++     +|++|++++|+....      .. ...++.++.+|++|.+++.+++..   
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~-----~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFAR-----RGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999998     899999999875321      00 112467889999999988776653   


Q ss_pred             ----CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCC
Q 015961           95 ----LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          +|.++|.|+.....  .    +.....+++|+.++.++++++...   ...-.+++++||...+       .+   
T Consensus        80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~-------~~---  149 (275)
T PRK05876         80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL-------VP---  149 (275)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc-------cC---
Confidence                57788887653211  1    134556799999999998887532   1113567777643222       10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                        .        .+  ...|+..|.        +.... ...|+++++++|+.+.+
T Consensus       150 --~--------~~--~~~Y~asK~a~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t  191 (275)
T PRK05876        150 --N--------AG--LGAYGVAKYGVVGLAETLAREV-TADGIGVSVLCPMVVET  191 (275)
T ss_pred             --C--------CC--CchHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEEeCcccc
Confidence              0        01  112553332        22222 34689999999999877

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.40  E-value=4e-12  Score=114.43  Aligned_cols=155  Identities=17%  Similarity=0.085  Sum_probs=101.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHccC----CCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQL----TDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~V~   99 (397)
                      ++||||||||+||.+++++|++     +|++|++++|++...  . ....++.++.+|++|.+++.+++..+    |.++
T Consensus         2 ~~vlItGas~giG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i   76 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAK-----QGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWI   76 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHh-----CCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence            6899999999999999999998     899999999975321  0 01235788999999999998888764    4466


Q ss_pred             EEEEeccc-CC---C--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWT-NR---S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL  173 (397)
Q Consensus       100 h~a~~~~~-~~---~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~  173 (397)
                      |.++.... ..   +  ..+..+++|+.++.++++++...-.+-.+++.+||..      ..++.               
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~------~~~~~---------------  135 (240)
T PRK06101         77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA------SELAL---------------  135 (240)
T ss_pred             EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh------hccCC---------------
Confidence            66543211 11   1  2356789999999999998876411224556555321      01110               


Q ss_pred             CCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          174 DAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       174 ~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                      +. ...|+..     .+...+.  ....|++++++||+.|++
T Consensus       136 ~~-~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t  176 (240)
T PRK06101        136 PR-AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVAT  176 (240)
T ss_pred             CC-CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCC
Confidence            00 1124432     2222111  145689999999999988

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.40  E-value=4.8e-12  Score=113.79  Aligned_cols=156  Identities=19%  Similarity=0.106  Sum_probs=104.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +++||||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|+++++++.++++     
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAK-----EGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998     899999999975321      0 012367889999999998877765     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.|+|+++......      ++..+.+++|+.++.++++++...  .....+++++|+...+      ++.     
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~------~~~-----  150 (239)
T PRK07666         82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ------KGA-----  150 (239)
T ss_pred             cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc------cCC-----
Confidence              5778999887533211      133567899999999998887643  1234567766642211      110     


Q ss_pred             CCCCCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                               .+  ...|+..     .++..+.  ....|++++++||+.+..
T Consensus       151 ---------~~--~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t  191 (239)
T PRK07666        151 ---------AV--TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVAT  191 (239)
T ss_pred             ---------CC--CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccC
Confidence                     00  1114432     2222211  134689999999999887

>PRK12743 oxidoreductase; Provisional

Probab=99.39  E-value=2.2e-11  Score=110.73  Aligned_cols=158  Identities=12%  Similarity=0.005  Sum_probs=102.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      |+|+||||||+|+||.+++++|++     .|++|+++.|+.....        ....++.++.+|++|.+++..++.   
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQ-----QGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLI   75 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            568999999999999999999999     8999988876543210        012357889999999987766554   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                          .+|.|+|+++......      +.....+++|+.++.++++++....   .+-.+++++||..         +   
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~---------~---  143 (256)
T PRK12743         76 QRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH---------E---  143 (256)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc---------c---
Confidence                3577888766422110      1345678999999999998876531   1124677665321         1   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                        ..      +..+...  |+.     +.++....  ....+++++.++|+.+..+
T Consensus       144 --~~------~~~~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~  189 (256)
T PRK12743        144 --HT------PLPGASA--YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATP  189 (256)
T ss_pred             --cC------CCCCcch--hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence              01      1111112  443     33332222  1346799999999999984

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.39  E-value=2e-11  Score=110.14  Aligned_cols=162  Identities=15%  Similarity=0.123  Sum_probs=98.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc----
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      ++||||||+|+||++++++|++     .|++|+++. |+....      .. ...++.++++|+.|++++..+++.    
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   76 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQ-----EGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQH   76 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            5899999999999999999998     899988754 443211      00 113577899999999988777664    


Q ss_pred             ---CCCeeEEEEecccCCC-------cHHHHHHhHHHHHHHHHHHHccc-----CCCcceEEEecCCccccccccccCCC
Q 015961           95 ---LTDVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAVIPN-----APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                         +|.|+|.++.......       +....+++|+.++.++++++...     ..+-.+|+++||...+      ++. 
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~------~~~-  149 (247)
T PRK09730         77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR------LGA-  149 (247)
T ss_pred             CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------cCC-
Confidence               4568888764322111       23467899999998777765432     1123457777643221      111 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                           | .+.   .+......+.+.++..+.  ....+++++++||+.++++
T Consensus       150 -----~-~~~---~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~  192 (247)
T PRK09730        150 -----P-GEY---VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTE  192 (247)
T ss_pred             -----C-Ccc---cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCc
Confidence                 0 000   010011112233333221  0346899999999999995

>PRK08324 short chain dehydrogenase; Validated

Probab=99.39  E-value=9e-12  Score=128.46  Aligned_cols=221  Identities=14%  Similarity=0.100  Sum_probs=130.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ..+++||||||+|+||+++++.|++     .|++|++++|+....      .....++.++.+|++|.+++.++++    
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~-----~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~  494 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAA-----EGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAAL  494 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHH-----CcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999998     899999999975321      1011367889999999988776664    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         ++|.|+|+|+......      ......+++|+.|+.++++++.+.  .... .+++++||...+      ++    
T Consensus       495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~------~~----  564 (681)
T PRK08324        495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV------NP----  564 (681)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc------CC----
Confidence               4677899876432211      134567899999999998877543  1112 467766642211      11    


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCcee-eccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIF-GFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                        .         + ....|+.     +.++..+..  ...|+++.+++|+.|| +.....  ...... .    ....+.
T Consensus       565 --~---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~--~~~~~~-~----~~~~g~  625 (681)
T PRK08324        565 --G---------P-NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT--GEWIEA-R----AAAYGL  625 (681)
T ss_pred             --C---------C-CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc--chhhhh-h----hhhccC
Confidence              0         0 0112553     333333321  3457999999999998 532111  100000 0    000111


Q ss_pred             Cc----eecCCccccceeeecccHHHHHHHHHHHhc--CCCCCCCceeccCCCe
Q 015961          234 PL----RFPGTKAAWECYSIASDADLIAEHQIWAAV--DPYAKNEAFNCNNGDV  281 (397)
Q Consensus       234 ~~----~~~g~~~~~~~~~~~~da~~la~~~~~~~~--~~~~~g~~yni~~~~~  281 (397)
                      +.    .+.+.+.....   ...+.++|.++++++.  .....|++|++.+|..
T Consensus       626 ~~~~~~~~~~~~~~l~~---~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        626 SEEELEEFYRARNLLKR---EVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             ChHHHHHHHHhcCCcCC---ccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence            10    01111222222   3344566888877763  3344578999988754

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.38  E-value=2.7e-12  Score=115.20  Aligned_cols=116  Identities=22%  Similarity=0.082  Sum_probs=84.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      ++++||||||+|+||++++++|++     .|++|++++|++...      .....++.++.+|+.|.+++.+.++     
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLA-----EGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999998     799999999976321      1011467889999999988877665     


Q ss_pred             --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  145 (397)
                        .+|.|+|+++.....      .++..+.+++|+.++.++++++.... .+..+++++|+
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISS  140 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECC
Confidence              567799987643211      11345678899999999988876431 22456777664

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.38  E-value=6.5e-12  Score=114.44  Aligned_cols=157  Identities=17%  Similarity=0.097  Sum_probs=102.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH-------ccCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL-------SQLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~-------~~~~~   97 (397)
                      .+|+||||||+|+||++++++|.+     .|++|++++|+.....  ..++.++++|++|.+++..++       ..+|.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLE-----AGARVVTTARSRPDDL--PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHH-----CCCEEEEEeCChhhhc--CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            458999999999999999999998     8999999999764432  246789999999998765544       34677


Q ss_pred             eeEEEEecccC--------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        98 V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      |+|+|+.....        .++....+++|+.++.++++++...  .....+++++||...+       .       +..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-------~-------~~~  146 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR-------L-------PLP  146 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc-------C-------CCC
Confidence            88887642211        1145667889999998776655432  1123467766642211       1       100


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          168 EDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       168 E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                      +     .  ...|+.     +.+...+.  ....|+++.+++|+.|..+
T Consensus       147 ~-----~--~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~  188 (260)
T PRK06523        147 E-----S--TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETE  188 (260)
T ss_pred             C-----C--cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCc
Confidence            0     1  112443     32222222  1345799999999999883

>PRK05717 oxidoreductase; Validated

Probab=99.38  E-value=2.4e-12  Score=116.98  Aligned_cols=161  Identities=14%  Similarity=0.099  Sum_probs=105.0

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++..+|+||||||+|+||++++++|++     .|++|++++|+....    ......+.++.+|++|.+++..++.    
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIA-----EGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            344568999999999999999999998     899999998864321    0011357789999999987755443    


Q ss_pred             ---cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|+|+......        ++....+++|+.++.++++++... ..+..+++++||...+      ++.   
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~------~~~---  151 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR------QSE---  151 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc------CCC---
Confidence               3577999987532211        134577899999999999998643 1112456666642211      110   


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhc-CCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~g~~~~ilRp~~v~G~  209 (397)
                         +        ....  |+.     +.+...+..+ ..++++..++|+.+.++
T Consensus       152 ---~--------~~~~--Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~  192 (255)
T PRK05717        152 ---P--------DTEA--YAASKGGLLALTHALAISLGPEIRVNAVSPGWIDAR  192 (255)
T ss_pred             ---C--------CCcc--hHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCC
Confidence               0        0011  443     3333333211 12489999999999884

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.38  E-value=4.2e-12  Score=114.81  Aligned_cols=158  Identities=15%  Similarity=0.037  Sum_probs=102.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHH-------c
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKL-------S   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~-------~   93 (397)
                      ++++||||||+|+||++++++|++     +|++|++++|+.....    ....++.++++|++|.+++...+       .
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLA-----EGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            457999999999999999999998     8999999998743210    00135678999999987655443       3


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      .+|.|+|+++......      +.....+++|+.++.++++++...-....++++++|      ....+|.         
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S------~~~~~~~---------  144 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGS------INAHIGM---------  144 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec------hHhccCC---------
Confidence            4677899876432211      144567899999999999999753111234444442      1112221         


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          168 EDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       168 E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                            + ....|+.     +.++..+..  ...|+++.++||+.++++
T Consensus       145 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~  186 (249)
T PRK06500        145 ------P-NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP  186 (249)
T ss_pred             ------C-CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence                  0 0112553     333332221  345899999999999984

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.38  E-value=9.5e-12  Score=111.68  Aligned_cols=112  Identities=21%  Similarity=0.140  Sum_probs=82.5

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHcc------
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQ------   94 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~~------   94 (397)
                      |||||++|+||++++++|++     +|++|++++|+....       .. ....+.++.+|++|.+++.+++++      
T Consensus         1 vlItG~~g~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAK-----EGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELG   75 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999998     899999999875221       00 112467899999999988776654      


Q ss_pred             -CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           95 -LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        95 -~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                       +|.|+|.++.....      .+.....+++|+.++.++++++...  .....+++++||
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS  135 (239)
T TIGR01830        76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISS  135 (239)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence             47799987753211      1245667899999999999988754  123457777764

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06398 aldose dehydrogenase; Validated

Probab=99.37  E-value=1.3e-11  Score=112.41  Aligned_cols=113  Identities=13%  Similarity=0.102  Sum_probs=84.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLT   96 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~   96 (397)
                      .++|+||||||+|.||.+++++|++     .|++|++++|+....    .++.++.+|++|++++.++++       .+|
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~-----~G~~Vi~~~r~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   74 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKE-----EGSNVINFDIKEPSY----NDVDYFKVDVSNKEQVIKGIDYVISKYGRID   74 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCcccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3468999999999999999999998     899999999975432    368899999999988776664       467


Q ss_pred             CeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           97 DVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        97 ~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      .++|+|+.....  .+    +....+++|+.++.++++++.+.  ..+..+++++||
T Consensus        75 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  131 (258)
T PRK06398         75 ILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIAS  131 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCc
Confidence            788877642211  11    34556799999999988877543  122457777765

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.37  E-value=4.9e-12  Score=115.29  Aligned_cols=114  Identities=17%  Similarity=0.064  Sum_probs=83.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHcc-------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ-------   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~-------   94 (397)
                      |++|||||||+||++++++|++     +|++|++++|++...     .....++.++.+|++|.+++.+++..       
T Consensus         2 k~vlItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   76 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAA-----EGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGG   76 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999998     899999999976421     01124688999999999887766543       


Q ss_pred             -CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           95 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        95 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                       +|.|+|+|+......      ++.+..+++|+.++.++++++...  .....+++++||
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  136 (260)
T PRK08267         77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS  136 (260)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence             477888876532111      135667899999999998887542  122456666664

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.37  E-value=8.9e-12  Score=112.36  Aligned_cols=115  Identities=16%  Similarity=0.078  Sum_probs=82.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      ++++|||||+|+||+++++.|++     +|+.|++..|+....  .  ....++.++.+|++|.+++.++++       .
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHA-----QGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999998     799988888764321  0  011357889999999988776543       4


Q ss_pred             CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           95 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        95 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      +|.|+|+++.....      .++....+++|+.++.++++++.+.  .....+++++||
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  139 (245)
T PRK12936         81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITS  139 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence            67788987643211      1145667899999999888876532  122457777764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.2e-11  Score=111.86  Aligned_cols=116  Identities=16%  Similarity=0.080  Sum_probs=83.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      |++++|||||+|+||.+++++|++     +|++|++++|++...         ......+.++++|++|.+++.++++  
T Consensus         1 ~~k~vlItGas~giG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   75 (248)
T PRK08251          1 TRQKILITGASSGLGAGMAREFAA-----KGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF   75 (248)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999998     799999999975321         0012367889999999987766554  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                           .+|.|+|.|+......      ......+++|+.++.++++++...  ..+..+++++||
T Consensus        76 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS  140 (248)
T PRK08251         76 RDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISS  140 (248)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence                 4677888776432211      133556889999999888877532  123557777764

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.36  E-value=3.1e-11  Score=108.88  Aligned_cols=116  Identities=16%  Similarity=0.036  Sum_probs=83.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++++||||||+|+||++++++|++     +|++|+++.|+....       . ....++.++.+|++|.+++.++++   
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAA-----DGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899988887754211       0 012457889999999988877766   


Q ss_pred             ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                          .+|.|+|+++.....      .+.....+++|+.++.++++++.+....-.+++++|+
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST  140 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence                467788887643211      1134556789999999999888654222246666653

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.36  E-value=4e-11  Score=108.40  Aligned_cols=115  Identities=18%  Similarity=0.123  Sum_probs=83.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +++||||||+|.||++++++|++     +|++|++++|++...      . ....++.++.+|++|.+++.++++     
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAE-----AGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999998     899999999875421      0 011357889999999998877664     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  145 (397)
                        .+|.|+|+++......      ......+++|+.++.++++++....  .+..+++++||
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  143 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS  143 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence              4677888876432111      1345567899999999998876531  12347777764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.36  E-value=6.9e-12  Score=114.20  Aligned_cols=161  Identities=15%  Similarity=0.123  Sum_probs=105.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++++||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|+++++.+++    
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGE-----AGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999975321      0 011357789999999988865554    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.|+|+++......      +.....+++|+.++.++++++...   .....+++++||...+      ++.   
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~------~~~---  156 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL------GGN---  156 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc------cCC---
Confidence               3677899876432111      133556789999999999987653   1235677777753222      111   


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                        .+   ..  .+.  ..|+.     +.++..+..  ...|+++.+++|+.+-.
T Consensus       157 --~~---~~--~~~--~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t  201 (259)
T PRK08213        157 --PP---EV--MDT--IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPT  201 (259)
T ss_pred             --Cc---cc--cCc--chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCC
Confidence              00   00  011  12553     333333321  34579999999988865

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.36  E-value=5e-12  Score=107.50  Aligned_cols=245  Identities=17%  Similarity=0.157  Sum_probs=143.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEe-CCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCee
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVA-RRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVT   99 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~   99 (397)
                      +..-+|||||+-|.+|..++..|...    -|-+ |+.-+ ++++....  ..-.++..|+.|...+++..-.  +|-.+
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~----yGs~~VILSDI~KPp~~V~--~~GPyIy~DILD~K~L~eIVVn~RIdWL~  115 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYM----YGSECVILSDIVKPPANVT--DVGPYIYLDILDQKSLEEIVVNKRIDWLV  115 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHH----hCCccEehhhccCCchhhc--ccCCchhhhhhccccHHHhhcccccceee
Confidence            34458999999999999999999863    2444 55444 34433221  2335788999999888877654  33366


Q ss_pred             EEEEec-ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC-CCCCCC
Q 015961          100 HIFYVT-WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP-RLDAPN  177 (397)
Q Consensus       100 h~a~~~-~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p-~~~~~~  177 (397)
                      |..+.. .+...+-....++|+.|..|+++.+.+++  ++-|+ -       |+.+.||+..+ ..| +.+.. ..|  .
T Consensus       116 HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFV-P-------STIGAFGPtSP-RNP-TPdltIQRP--R  181 (366)
T KOG2774|consen  116 HFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK--LKVFV-P-------STIGAFGPTSP-RNP-TPDLTIQRP--R  181 (366)
T ss_pred             eHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC--eeEee-c-------ccccccCCCCC-CCC-CCCeeeecC--c
Confidence            653321 12233445567899999999999998874  55555 2       33346665311 011 11111 122  3


Q ss_pred             cchhH----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH-HhhhcCCCceecCCccccceeeeccc
Q 015961          178 FYYTL----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA-VCKHEGIPLRFPGTKAAWECYSIASD  252 (397)
Q Consensus       178 ~~y~~----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~g~~~~~~~~~~~~d  252 (397)
                      ..|+.    .+++.|++....|+++-.+|++.++...+.........++.|-. +.+  |+- ..+=..+......+..|
T Consensus       182 TIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~--gk~-tCylrpdtrlpmmy~~d  258 (366)
T KOG2774|consen  182 TIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQK--GKH-TCYLRPDTRLPMMYDTD  258 (366)
T ss_pred             eeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHc--CCc-ccccCCCccCceeehHH
Confidence            33664    45566666567899999999998888654333222223333332 222  332 11111223335555555


Q ss_pred             HHHHHHHHHH--HhcCCCCCCCceeccCCCeeehHHHHHHHHHHh
Q 015961          253 ADLIAEHQIW--AAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF  295 (397)
Q Consensus       253 a~~la~~~~~--~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~  295 (397)
                      -.   ++++.  ++.+.....++||+++ -..|-.|+++.+.+.+
T Consensus       259 c~---~~~~~~~~a~~~~lkrr~ynvt~-~sftpee~~~~~~~~~  299 (366)
T KOG2774|consen  259 CM---ASVIQLLAADSQSLKRRTYNVTG-FSFTPEEIADAIRRVM  299 (366)
T ss_pred             HH---HHHHHHHhCCHHHhhhheeeece-eccCHHHHHHHHHhhC
Confidence            41   12222  2334456678999984 8899999999888765

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.36  E-value=7.9e-12  Score=112.70  Aligned_cols=155  Identities=15%  Similarity=0.039  Sum_probs=102.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      |+|+||||+|+||.+++++|++     +|++|++++|++....        ....+++++++|++|.+++.+.++.    
T Consensus         2 ~~vlItGas~giG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAA-----AGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL   76 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHh-----cCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence            6899999999999999999998     8999999999764210        0124688999999999888776654    


Q ss_pred             CCCeeEEEEecccCC---C---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      +|.|+|.++......   .   +....+++|+.++.++++++...  ..+..+++++||...      .++.        
T Consensus        77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------~~~~--------  142 (243)
T PRK07102         77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAG------DRGR--------  142 (243)
T ss_pred             CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccc------cCCC--------
Confidence            466888765422111   1   33456889999999999887653  122456776664210      1110        


Q ss_pred             CCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          167 TEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                             + ....|+..     .+...+.  ....|+++..++|+.+.+
T Consensus       143 -------~-~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t  183 (243)
T PRK07102        143 -------A-SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRT  183 (243)
T ss_pred             -------C-CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccC
Confidence                   0 01114432     2222221  145689999999999987

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.34  E-value=9.2e-12  Score=112.12  Aligned_cols=156  Identities=15%  Similarity=0.077  Sum_probs=102.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-----CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-----~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +|++|||||+|+||..++++|++     +|++|++++|++...  .     ....++.++.+|++|.+++..+++     
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAK-----AGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ   80 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998     899999999975321  0     012367889999999988766665     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.|+|+++......      ++....+++|+.++.++++++...  ..+..+++++||...+       ++.    
T Consensus        81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~~~----  149 (241)
T PRK07454         81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR-------NAF----  149 (241)
T ss_pred             cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC-------cCC----
Confidence              3677888876422111      134566889999988877776432  1224577777643322       110    


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                               ..  ...|+.     +.+.....  ....|++++++||+.+-.
T Consensus       150 ---------~~--~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t  190 (241)
T PRK07454        150 ---------PQ--WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNT  190 (241)
T ss_pred             ---------CC--ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccC
Confidence                     01  111443     22222211  134689999999998876

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.34  E-value=1.2e-11  Score=111.92  Aligned_cols=156  Identities=15%  Similarity=0.118  Sum_probs=101.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--C--CCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLVEYVQCDVSDPEETQAKLS-------QL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v~~~~~Dl~d~~~l~~~~~-------~~   95 (397)
                      |+|+||||||+||.+++++|++     +|++|++++|++....  .  ...++.++.+|++|.+++..+++       ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQ-----QGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999998     8999999999754210  0  11367889999999988776654       57


Q ss_pred             CCeeEEEEecccC---C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        96 ~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      |.|+|+++.....   .    +.....+++|+.++.++++++...  ..+..+++++||...+              .+.
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------------~~~  141 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS--------------WPY  141 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC--------------CCC
Confidence            7788887643211   1    134567899999976666655432  1235677777642211              000


Q ss_pred             CCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          167 TEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                            ..  ...|+.     +.+.....  ....++.+.+++|+.+.|.
T Consensus       142 ------~~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~  183 (248)
T PRK10538        142 ------AG--GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT  183 (248)
T ss_pred             ------CC--CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence                  01  112443     33332222  1346799999999999873

>PRK08643 acetoin reductase; Validated

Probab=99.34  E-value=1.8e-11  Score=111.27  Aligned_cols=157  Identities=18%  Similarity=0.091  Sum_probs=101.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      |+|++|||||+|+||.+++++|++     +|++|++++|+....      .. ...++.++.+|++|++++.+++.    
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVE-----DGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVD   75 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999998     899999999975321      00 12356789999999987766654    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         ++|.|+|+++......      +.....+++|+.++..+++++...   ...-.+++++||...      .++.   
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------~~~~---  146 (256)
T PRK08643         76 TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG------VVGN---  146 (256)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc------ccCC---
Confidence               4677888875422111      133567889999988777766543   111245666664221      1111   


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                                  +. ...|+.     +.+...+.  ....|++++.++|+.+..
T Consensus       147 ------------~~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t  187 (256)
T PRK08643        147 ------------PE-LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKT  187 (256)
T ss_pred             ------------CC-CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcC
Confidence                        00 112443     22222221  135689999999998877

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.34  E-value=2.2e-11  Score=110.79  Aligned_cols=158  Identities=11%  Similarity=0.056  Sum_probs=105.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .+++||||||+|+||++++++|++     +|++|++++|++....      ....++.++.+|+++++++...++     
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAE-----EGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----cCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            358999999999999999999999     8999999998764320      012367899999999998877665     


Q ss_pred             --cCCCeeEEEEecccC-C----CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN-R----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                        .+|.|+|+++..... .    ++....+++|+.++.++.+++.+. .....+++++||...+      ++.       
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------~~~-------  147 (258)
T PRK08628         81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL------TGQ-------  147 (258)
T ss_pred             cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc------cCC-------
Confidence              467788987642111 1    134556789999999988877643 1123567777642211      110       


Q ss_pred             CCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          166 FTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                             .+  ...|+.     +.+......  ...+++++.++|+.|+++
T Consensus       148 -------~~--~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~  189 (258)
T PRK08628        148 -------GG--TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTP  189 (258)
T ss_pred             -------CC--CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCH
Confidence                   01  112553     333333221  346899999999999983

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.34  E-value=2.7e-11  Score=108.58  Aligned_cols=115  Identities=17%  Similarity=0.127  Sum_probs=84.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCH-HHHHHHHccCCCeeEEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-EETQAKLSQLTDVTHIF  102 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~~V~h~a  102 (397)
                      .++|++|||||+|+||.+++++|++     +|++|++++|++....  ..++.++.+|++++ +.+.+.+..+|.|+|++
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~a   75 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLA-----QGAQVYGVDKQDKPDL--SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTA   75 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHH-----CCCEEEEEeCCccccc--CCcEEEEECChHHHHHHHHHhhCCCCEEEECC
Confidence            4568999999999999999999998     8999999999764432  24678999999997 44555556678888887


Q ss_pred             Eecc--cC-C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961          103 YVTW--TN-R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus       103 ~~~~--~~-~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      +...  .. .    ++....+++|+.++.++++++...  ..+..+++++||
T Consensus        76 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  127 (235)
T PRK06550         76 GILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS  127 (235)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            6321  11 1    134567899999999999887643  112346777764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=2.9e-11  Score=109.53  Aligned_cols=208  Identities=13%  Similarity=0.098  Sum_probs=121.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      ++++|||||+|+||.++++.|++     +|++|++++|+....      . ....++.++++|++|.+++.++++.    
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQ-----KGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999998     799999999875321      0 0123577899999998877655543    


Q ss_pred             ---CCCeeEEEEecccC-----------C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccc
Q 015961           95 ---LTDVTHIFYVTWTN-----------R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPF  153 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~-----------~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~  153 (397)
                         +|.|+|+++.....           .    +.....+++|+.++.++++++...   ...-..++++|+..      
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~------  153 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA------  153 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc------
Confidence               56788887632110           0    133456789999998776655432   11123455555322      


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH
Q 015961          154 EAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA  226 (397)
Q Consensus       154 ~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  226 (397)
                       .+|..              +...  |+.     +.++..+..  ...+++++.++|+.+.++......   ...   ..
T Consensus       154 -~~~~~--------------~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~~---~~  210 (253)
T PRK08217        154 -RAGNM--------------GQTN--YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---PEA---LE  210 (253)
T ss_pred             -ccCCC--------------CCch--hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---HHH---HH
Confidence             22210              1111  443     333333221  246899999999999873211111   111   00


Q ss_pred             HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCC
Q 015961          227 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD  280 (397)
Q Consensus       227 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~  280 (397)
                      ... ...+..            ...+..++|..+.+++......|++|++.++.
T Consensus       211 ~~~-~~~~~~------------~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        211 RLE-KMIPVG------------RLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHH-hcCCcC------------CCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            000 111211            11234555777777765544578899988753

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.9e-11  Score=114.48  Aligned_cols=173  Identities=13%  Similarity=-0.018  Sum_probs=106.5

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHH
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      .++.++|+++||||||+||.+++++|++     .|++|+++.|+....         .....++.++.+|+.|.+++.++
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~-----~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~   83 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAA-----AGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAAL   83 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHH
Confidence            3445678999999999999999999998     899999999975321         01123578899999999887666


Q ss_pred             Hcc-------CCCeeEEEEecccCC-----CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCC
Q 015961           92 LSQ-------LTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        92 ~~~-------~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                      ++.       +|.++|.|+......     +..+..+++|+.|...+.+.+... ...-.+++.+||...+.+.      
T Consensus        84 ~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~------  157 (313)
T PRK05854         84 GEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGA------  157 (313)
T ss_pred             HHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCC------
Confidence            543       566888876533211     245667899999977776665432 1112356666654333211      


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHHHHHH-----HHh----cCCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLEDILFE-----EVE----KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~~l~~-----~~~----~~~g~~~~ilRp~~v~G  208 (397)
                      .  ......++.+..+  ...|+..|....     +..    ...|+.+..+.|+.|-.
T Consensus       158 ~--~~~~~~~~~~~~~--~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T  212 (313)
T PRK05854        158 I--NWDDLNWERSYAG--MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT  212 (313)
T ss_pred             c--CcccccccccCcc--hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence            0  0111222222212  223665433322     211    13469999999998864

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.32  E-value=7.6e-11  Score=107.22  Aligned_cols=104  Identities=13%  Similarity=0.030  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++|++|||||+|+||.++++.|++     +|++|+++.++.....           ....++.++++|++|++++.+++.
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~-----~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAA-----QGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHH-----CCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHH
Confidence            457999999999999999999998     8999777776532110           011357789999999988876664


Q ss_pred             -------cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc
Q 015961           94 -------QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                             .+|.++|.|+.....    .  +.....+++|+.++..+++++...
T Consensus        82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  134 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH  134 (257)
T ss_pred             HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence                   357788887653211    1  134567889999999999988654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.4e-11  Score=111.13  Aligned_cols=155  Identities=18%  Similarity=0.078  Sum_probs=99.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--CCCCceEEEccCCCHHHHHHHHc-----------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLS-----------   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~-----------   93 (397)
                      ++||||||||+||++++++|++     +|++|++++|+......  ...++.++++|++|.+++..++.           
T Consensus         2 ~~vlItGasggiG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQ-----PGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHh-----CCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            4899999999999999999998     89999999997543211  12357889999999988777443           


Q ss_pred             cCCCeeEEEEecccC--C-----CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN--R-----STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~--~-----~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      ..+.++|+++.....  .     +.....+++|+.++..+.+++.+..  ....+++++||...+       .+      
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------~~------  143 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR-------NA------  143 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc-------CC------
Confidence            234578877643221  1     1345667899999777766655431  124577777643221       10      


Q ss_pred             CCCCCCCCCCCCCcchhH-----HHHHHHHHh-cCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTL-----EDILFEEVE-KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~~-~~~g~~~~ilRp~~v~G  208 (397)
                             ..+  ...|+.     +.++..+.. ...++++..++|+.+-.
T Consensus       144 -------~~~--~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t  184 (243)
T PRK07023        144 -------YAG--WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT  184 (243)
T ss_pred             -------CCC--chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence                   001  122554     333433321 23579999999987744

>PRK07985 oxidoreductase; Provisional

Probab=99.32  E-value=2.4e-11  Score=112.76  Aligned_cols=158  Identities=12%  Similarity=0.039  Sum_probs=102.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|+++.|+....       .  ....++.++.+|++|.+++..++.  
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~-----~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAR-----EGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            347999999999999999999999     899999887653211       0  012346788999999987765544  


Q ss_pred             -----cCCCeeEEEEecccC-------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC
Q 015961           94 -----QLTDVTHIFYVTWTN-------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~-------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                           .+|.++|.|+.....       .++....+++|+.++.++++++...-..-.+|+++||...|..          
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~----------  192 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP----------  192 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC----------
Confidence                 356677776532110       1145667899999999999988754212246777765332211          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH-----HHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                        .         +. ...|+..|     +......  ...|+++.+++|+.|.++
T Consensus       193 --~---------~~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~  235 (294)
T PRK07985        193 --S---------PH-LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA  235 (294)
T ss_pred             --C---------CC-cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccc
Confidence              0         00 11155322     2222210  346899999999999984

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.4e-11  Score=113.12  Aligned_cols=115  Identities=17%  Similarity=-0.020  Sum_probs=81.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS-------QL   95 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~-------~~   95 (397)
                      +++||||||||.||.+++++|++     +|++|++++|++....   .....+.++.+|++|++++.++++       .+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAA-----LGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999998     8999999999753210   011247889999999988765554       35


Q ss_pred             CCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           96 TDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        96 ~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      |.++|.|+......    +  .....+++|+.|+.++++++...  ..+..+++.+||
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS  137 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVAS  137 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence            66888776432111    1  34556789999988877766542  123457887774

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.31  E-value=2.7e-11  Score=108.00  Aligned_cols=159  Identities=20%  Similarity=0.188  Sum_probs=108.0

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHc
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      .+.+++++||||||+-||..++++|.+     +|++|+.+.|+.++-      ..  ..-.++++.+|+++++++.....
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~-----~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~   76 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLAR-----RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLED   76 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHH
Confidence            345668999999999999999999999     899999999986531      11  12356799999999987766553


Q ss_pred             -------cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCC
Q 015961           94 -------QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                             .+|..++.|+.....      .+...+++++|+.++..|-.+....  ..+-.+++-++|...|..       
T Consensus        77 ~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p-------  149 (265)
T COG0300          77 ELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP-------  149 (265)
T ss_pred             HHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC-------
Confidence                   366677777653322      1145678899999988777766543  122456776664332311       


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                    .|.... |+.        .+.|+... +.+|+.++.+-|+.+.-
T Consensus       150 --------------~p~~av-Y~ATKa~v~~fSeaL~~EL-~~~gV~V~~v~PG~~~T  191 (265)
T COG0300         150 --------------TPYMAV-YSATKAFVLSFSEALREEL-KGTGVKVTAVCPGPTRT  191 (265)
T ss_pred             --------------CcchHH-HHHHHHHHHHHHHHHHHHh-cCCCeEEEEEecCcccc
Confidence                          121122 332        55555555 78899999999887765

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.31  E-value=2.7e-11  Score=112.33  Aligned_cols=115  Identities=18%  Similarity=0.137  Sum_probs=82.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +++||||||+|+||.+++++|++     +|++|++++|+....      . .....+.++.+|++|.+++.++++     
T Consensus        40 ~k~vlItGasggIG~~la~~La~-----~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFAR-----RGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998     899999999975321      0 011346789999999988877766     


Q ss_pred             --cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                        .+|.++|+|+......        ......+++|+.|+.++++++...  .....+++++||
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS  178 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT  178 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence              5677888876432111        123456789999988887766432  112457777764

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.31  E-value=1.2e-11  Score=113.67  Aligned_cols=114  Identities=20%  Similarity=0.133  Sum_probs=81.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHc-------cCCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-------QLTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~V   98 (397)
                      |++|||||+|+||++++++|++     +|++|++++|+..... ....++.++.+|++|.+++.++++       .+|.|
T Consensus         2 k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKA-----AGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999999998     8999999999753210 011357789999999988766553       46779


Q ss_pred             eEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecC
Q 015961           99 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG  145 (397)
Q Consensus        99 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~  145 (397)
                      +|+++......      ++....+++|+.|+.++++++... .....+++.+||
T Consensus        77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  130 (274)
T PRK05693         77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS  130 (274)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence            99876432111      134567899999999988887542 111245665553

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.31  E-value=2.6e-11  Score=109.95  Aligned_cols=115  Identities=17%  Similarity=0.086  Sum_probs=85.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc-------CCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-------~~~   97 (397)
                      ++|++|||||+|+||++++++|++     .|++|++++|+..... ...++.++.+|+.|.+++.+++..       +|.
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~-----~g~~v~~~~r~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLA-----AGATVVVCGRRAPETV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCChhhhh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999998     8999999999764311 124678999999999888776654       477


Q ss_pred             eeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961           98 VTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  145 (397)
Q Consensus        98 V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  145 (397)
                      |+|+|+.....  .    +..+..+++|+.++.++++++...   .....+++++||
T Consensus        79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  135 (252)
T PRK07856         79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS  135 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence            88987642211  1    134567899999999999987652   112356777664

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.31  E-value=1.8e-11  Score=111.78  Aligned_cols=155  Identities=15%  Similarity=0.094  Sum_probs=101.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ++||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|.+++..++.      
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~-----~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   76 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLAR-----AGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF   76 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            6899999999999999999998     899999999975321      0 012367789999999988777665      


Q ss_pred             -cCCCeeEEEEecccCC--C-----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR--S-----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~--~-----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.|+|+++......  +     .....+++|+.++.++++++... .....+++++||...|       ..      
T Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~-------~~------  143 (263)
T PRK06181         77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGL-------TG------  143 (263)
T ss_pred             CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccccc-------CC------
Confidence             4677899876432210  1     23456899999999999988643 1123566666542221       11      


Q ss_pred             CCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                             ..+...  |+..|     +...+.  ....++++++++|+.+..
T Consensus       144 -------~~~~~~--Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t  185 (263)
T PRK06181        144 -------VPTRSG--YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVAT  185 (263)
T ss_pred             -------CCCccH--HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCcccc
Confidence                   001112  54322     222211  134689999999998876

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.30  E-value=3.6e-11  Score=109.91  Aligned_cols=114  Identities=12%  Similarity=0.088  Sum_probs=84.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~   97 (397)
                      ++|++|||||+|+||.+++++|++     +|++|++++|+.....  ..++.++.+|++|++++.++++       .+|.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~-----~G~~v~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLA-----NGANVVNADIHGGDGQ--HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCccccc--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            357999999999999999999998     8999999998764431  2467889999999988776654       3577


Q ss_pred             eeEEEEecccC---------------CCcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961           98 VTHIFYVTWTN---------------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  145 (397)
Q Consensus        98 V~h~a~~~~~~---------------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  145 (397)
                      ++|+|+.....               .++.+..+++|+.++.++++++...-  .+..+++++||
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  145 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSS  145 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            88887642210               11335578999999999998886541  12346777664

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.30  E-value=2.4e-11  Score=109.89  Aligned_cols=158  Identities=13%  Similarity=0.067  Sum_probs=103.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+....    . ....++.++.+|+++.+++..+++      
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAE-----AGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999     899999999865211    0 012357889999999988776554      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEecCCccccccccccCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                       .+|.++|+++......      ...++.+++|+.++.++++++...  ... ..+++++||...|       ++     
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~-----  146 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF-------QG-----  146 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc-------cC-----
Confidence             3666888876432111      134566889999999999887543  111 3567777653322       11     


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                      .+        ..+.  |+.     +.+...+..  ...|+++.+++|+.|..+
T Consensus       147 ~~--------~~~~--Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~  189 (248)
T TIGR01832       147 GI--------RVPS--YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATN  189 (248)
T ss_pred             CC--------CCch--hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCc
Confidence            00        0012  432     333322221  345899999999998873

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.30  E-value=1.5e-11  Score=111.72  Aligned_cols=158  Identities=14%  Similarity=0.081  Sum_probs=100.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS-------QL   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~   95 (397)
                      ++++||||||+|+||.+++++|++     +|++|++++|+....  ........++++|++|.+++..+++       .+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAA-----EGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            358999999999999999999998     899999999975421  0001123688999999988777665       35


Q ss_pred             CCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        96 ~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      |.|+|+++......        +.....+++|+.++.++++++...  .....+++++||..      ..+|..      
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~------~~~g~~------  148 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFV------AVMGSA------  148 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchh------hccCCC------
Confidence            77888876432111        124567889999988777766432  11234566655311      122210      


Q ss_pred             CCCCCCCCCCCCcchhHHH-----HHHH---HHhcCCCeeEEEEcCCceeec
Q 015961          166 FTEDMPRLDAPNFYYTLED-----ILFE---EVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~-----~l~~---~~~~~~g~~~~ilRp~~v~G~  209 (397)
                               .....|+..|     +...   .. ...|++++++||+.+.++
T Consensus       149 ---------~~~~~Y~~sKaal~~~~~~l~~~~-~~~gi~v~~i~pg~v~t~  190 (255)
T PRK06057        149 ---------TSQISYTASKGGVLAMSRELGVQF-ARQGIRVNALCPGPVNTP  190 (255)
T ss_pred             ---------CCCcchHHHHHHHHHHHHHHHHHH-HhhCcEEEEEeeCCcCCc
Confidence                     0011244322     2221   22 345899999999999873

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.30  E-value=1.1e-10  Score=106.23  Aligned_cols=116  Identities=12%  Similarity=0.068  Sum_probs=81.6

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------------C-CCCCCceEEEccCCC
Q 015961           25 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------------W-NADHLVEYVQCDVSD   84 (397)
Q Consensus        25 ~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------------~-~~~~~v~~~~~Dl~d   84 (397)
                      ++++||||||||  .||.+++++|++     .|++|+++.|++.+.                 . ....++.++.+|++|
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   78 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAA-----KGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ   78 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHH-----cCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC
Confidence            557899999996  699999999998     899999999872210                 0 001357899999999


Q ss_pred             HHHHHHHHcc-------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc-C-CCcceEEEecC
Q 015961           85 PEETQAKLSQ-------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-A-PNLRHVCLQTG  145 (397)
Q Consensus        85 ~~~l~~~~~~-------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~-~~~~~~~~~s~  145 (397)
                      .+++..+++.       +|.|+|+|+......      ......+++|+.++.++++++... . ....+++++|+
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss  154 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS  154 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECC
Confidence            9877665543       566888876421111      134556889999999999988643 1 12346777764

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.30  E-value=3.5e-11  Score=110.33  Aligned_cols=155  Identities=15%  Similarity=0.092  Sum_probs=100.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      |+||||||||+||++++++|++     +|++|++++|+....      . .....+.++.+|++|.+++.+++.      
T Consensus         1 ~~vlVtGasggIG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   75 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAR-----EGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW   75 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999     899999999875321      0 112457789999999988777664      


Q ss_pred             -cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.|+|.++......  +    ..+..+++|+.++.++.+++...  ..+..+++++||...+..            .
T Consensus        76 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~  143 (270)
T PRK05650         76 GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ------------G  143 (270)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC------------C
Confidence             4677888876432211  1    23446789988887766654321  112467777764322110            0


Q ss_pred             CCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeec
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                               + ....|+..|.        +.... ...|+++++++|+.+..+
T Consensus       144 ---------~-~~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t~  185 (270)
T PRK05650        144 ---------P-AMSSYNVAKAGVVALSETLLVEL-ADDEIGVHVVCPSFFQTN  185 (270)
T ss_pred             ---------C-CchHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEecCccccC
Confidence                     0 0112443222        22222 346899999999999873

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.30  E-value=2.9e-11  Score=107.50  Aligned_cols=163  Identities=15%  Similarity=0.076  Sum_probs=102.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHc-----cCCCeeE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-----QLTDVTH  100 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~-----~~~~V~h  100 (397)
                      ++++||||+|+||++++++|++     .|++|++++|++.... ....+++++.+|++|.+++..++.     .+|.|+|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRA-----DGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHh-----CCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence            6899999999999999999998     8999999999754311 111346789999999988877542     2566888


Q ss_pred             EEEecccC--------CCcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961          101 IFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus       101 ~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      +++.....        .++.+..+++|+.++.++++++.+. ...-.+++++||..      ..++.     .+.   .+
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~------~~~~~-----~~~---~~  142 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRM------GSIGD-----ATG---TT  142 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcc------ccccc-----ccC---CC
Confidence            77643111        1145667899999999999988753 11123455555321      12221     000   00


Q ss_pred             CCCCCCcchhHHHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          172 RLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       172 ~~~~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      ..+......+.+.++..+..+..+++++.++|+.+.-
T Consensus       143 ~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t  179 (222)
T PRK06953        143 GWLYRASKAALNDALRAASLQARHATCIALHPGWVRT  179 (222)
T ss_pred             ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeec
Confidence            0011111122344444443233468999999998876

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.29  E-value=2.1e-11  Score=110.46  Aligned_cols=157  Identities=13%  Similarity=0.094  Sum_probs=101.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C--CCCCCceEEEccCCCHHHHHHHHcc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W--NADHLVEYVQCDVSDPEETQAKLSQ-----   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~--~~~~~v~~~~~Dl~d~~~l~~~~~~-----   94 (397)
                      ++|+||||||+|+||+++++.|++     +|++|+++.++....   .  ....++.++.+|+.|++++.++++.     
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAR-----EGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            347899999999999999999998     899998776543211   0  0113678899999999888776653     


Q ss_pred             ---CCCeeEEEEeccc-------CC-----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961           95 ---LTDVTHIFYVTWT-------NR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        95 ---~~~V~h~a~~~~~-------~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                         +|.++|.|+....       ..     ++....+++|+.++.++++++...  ..+..+++++||..         +
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~---------~  149 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL---------F  149 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcc---------c
Confidence               6778888753211       00     133556899999999999988643  11235666665311         1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                           ..      +..+...  |+.     +.++..+..  ...|+.+..++|+.+--
T Consensus       150 -----~~------~~~~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t  194 (253)
T PRK08642        150 -----QN------PVVPYHD--YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRT  194 (253)
T ss_pred             -----cC------CCCCccc--hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCC
Confidence                 00      1111112  443     444444321  34579999999998865

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.29  E-value=3.4e-11  Score=107.25  Aligned_cols=113  Identities=18%  Similarity=0.197  Sum_probs=81.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHc-----cCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS-----QLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~-----~~~~V~   99 (397)
                      ++|+||||+|+||++++++|++     .|++|++++|++...  .....++.++.+|++|.+++.++++     .+|.|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLE-----RGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHh-----CCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            6899999999999999999998     899999999986432  1112467788999999987766665     367788


Q ss_pred             EEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEec
Q 015961          100 HIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQT  144 (397)
Q Consensus       100 h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s  144 (397)
                      |+++......        .+....+++|+.++.++++++.... ....+++++|
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~s  130 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMS  130 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEc
Confidence            8876532111        1334566889999998888876541 1123455554

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.29  E-value=1.3e-11  Score=110.86  Aligned_cols=158  Identities=15%  Similarity=0.082  Sum_probs=99.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      ++++||||||+|+||+++++.|++     .|++|++++|++...      .....+++++.+|++|++++.++++.    
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALK-----EGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999999975421      01113578899999999887665543    


Q ss_pred             ---CCCeeEEEEecccCC----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           95 ---LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                         +|.++|.++......    +..+..+++|+.+..++++.+...-.+-.+++++|+...      .++.     .   
T Consensus        79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~------~~~~-----~---  144 (238)
T PRK05786         79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG------IYKA-----S---  144 (238)
T ss_pred             hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh------cccC-----C---
Confidence               466777654321111    123455788999988887776654111234565553110      1110     0   


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961          168 EDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       168 E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                         +  +...  |..     +.++..+..  ...+++++++||+.+++
T Consensus       145 ---~--~~~~--Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~  185 (238)
T PRK05786        145 ---P--DQLS--YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISG  185 (238)
T ss_pred             ---C--CchH--HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCC
Confidence               0  1111  443     323322221  34589999999999998

>PRK12742 oxidoreductase; Provisional

Probab=99.29  E-value=3.5e-11  Score=107.98  Aligned_cols=159  Identities=13%  Similarity=0.040  Sum_probs=100.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHcc---CCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQ---LTD   97 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~   97 (397)
                      .++|+||||||+|.||++++++|++     +|++|+++.|+....   .....++.++.+|++|.+++.+.+..   +|.
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   78 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVT-----DGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDI   78 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence            3468999999999999999999998     899998877643211   10112467889999999887776654   566


Q ss_pred             eeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        98 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      ++|+++......      ++.+..+++|+.++.+++.++...-..-.+++++||.         .+.    ..      +
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~---------~~~----~~------~  139 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV---------NGD----RM------P  139 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc---------ccc----cC------C
Confidence            778765432111      1346678999999998876665431123466666531         110    00      1


Q ss_pred             CCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961          172 RLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                      ..+...  |+.     +.+......  ...|+++.+++|+.+..
T Consensus       140 ~~~~~~--Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t  181 (237)
T PRK12742        140 VAGMAA--YAASKSALQGMARGLARDFGPRGITINVVQPGPIDT  181 (237)
T ss_pred             CCCCcc--hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccC
Confidence            111112  442     433333221  34679999999998876

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.29  E-value=2.6e-11  Score=109.59  Aligned_cols=159  Identities=14%  Similarity=0.074  Sum_probs=98.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      |+|+||||||+|+||+.+++.|++     +|++|+++.++....       . ....++.++.+|+.|.+++.++++   
T Consensus         1 m~k~ilItGas~giG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAA-----RGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQ   75 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            668999999999999999999998     899987765433211       0 012367899999999987766554   


Q ss_pred             ----cCCCeeEEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHccc-CC----CcceEEEecCCccccccccccC
Q 015961           94 ----QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPN-AP----NLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~-~~----~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                          .+|.++|+|+......   +    +....+++|+.++.++++++.+. ..    +-.+++++||...      .+|
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~------~~~  149 (248)
T PRK06947         76 SAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIAS------RLG  149 (248)
T ss_pred             HhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhh------cCC
Confidence                4677888876432111   1    23456889999998887644332 11    1234676664221      222


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                      .    ..         ....  |+.     +.+...+..  ...+++++++||+.+..+
T Consensus       150 ~----~~---------~~~~--Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~  193 (248)
T PRK06947        150 S----PN---------EYVD--YAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETE  193 (248)
T ss_pred             C----CC---------CCcc--cHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccc
Confidence            1    00         0011  432     322222221  345799999999999873

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.28  E-value=1.3e-10  Score=105.48  Aligned_cols=154  Identities=16%  Similarity=0.140  Sum_probs=97.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC-------CC--CCCCceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN-------WN--ADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~-------~~--~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      .+++||||||+|.||.+++++|++     + |++|++++|++...       ..  ...+++++.+|++|.+++.+.++ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~-----~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~   81 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLK-----NAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDA   81 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHh-----cCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHH
Confidence            457899999999999999999998     5 58999999976531       10  11267899999999887554443 


Q ss_pred             -----cCCCeeEEEEecccCCC---cH---HHHHHhHHHHHHH----HHHHHcccCCCcceEEEecCCccccccccccCC
Q 015961           94 -----QLTDVTHIFYVTWTNRS---TE---AENCKINGSMFRN----VLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~~---~~---~~~~~~nv~gt~~----ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                           .+|.++|.++.......   ++   .+.+++|+.++.+    +++.+++.+  ..+++++||...+.        
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--~~~iv~isS~~g~~--------  151 (253)
T PRK07904         82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--FGQIIAMSSVAGER--------  151 (253)
T ss_pred             HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--CceEEEEechhhcC--------
Confidence                 46667776654321111   11   2357999998876    455555432  46777776432110        


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                          ..      +  .  ...|+..|        .+.... +..++++++++|+.+.-
T Consensus       152 ----~~------~--~--~~~Y~~sKaa~~~~~~~l~~el-~~~~i~v~~v~Pg~v~t  194 (253)
T PRK07904        152 ----VR------R--S--NFVYGSTKAGLDGFYLGLGEAL-REYGVRVLVVRPGQVRT  194 (253)
T ss_pred             ----CC------C--C--CcchHHHHHHHHHHHHHHHHHH-hhcCCEEEEEeeCceec
Confidence                00      0  1  11144322        233333 56789999999999876

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.27  E-value=2e-10  Score=103.35  Aligned_cols=114  Identities=18%  Similarity=0.183  Sum_probs=78.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-----NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      |.+|||||+|+||++++++|++     .|++|+++.|+....   .     ....++.++.+|++|++++.++++     
T Consensus         1 k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAK-----DGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE   75 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999998     899999998842211   0     012357899999999987766554     


Q ss_pred             --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                        .+|.|+|+++.....      .++....+++|+.++..+++++...  ..+..+++++||
T Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss  137 (242)
T TIGR01829        76 LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISS  137 (242)
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence              356788887643211      1134566789999987766655332  123457777764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.27  E-value=1.7e-10  Score=100.05  Aligned_cols=155  Identities=20%  Similarity=0.155  Sum_probs=103.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHH-------c
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKL-------S   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~-------~   93 (397)
                      +|.|+|||||+-||.++++.|.+     .|++|++..|+.+.-     ......+..+..|++|.+++.+++       .
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~-----~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           6 GKVALITGASSGIGEATARALAE-----AGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHH-----CCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            47899999999999999999999     899999999986531     111135778999999998754444       3


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.++|-|+.+-...      ++.+.++++|+.|..+...++...  ..+-.+++.+||+.         |..     +
T Consensus        81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA---------G~~-----~  146 (246)
T COG4221          81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA---------GRY-----P  146 (246)
T ss_pred             cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc---------ccc-----c
Confidence            4676777766543311      156788999999998888877654  12234677665422         110     0


Q ss_pred             CCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          166 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                             .|.... |+.        .+-|+..+ ...+++++.+-|+.|-.
T Consensus       147 -------y~~~~v-Y~ATK~aV~~fs~~LR~e~-~g~~IRVt~I~PG~v~~  188 (246)
T COG4221         147 -------YPGGAV-YGATKAAVRAFSLGLRQEL-AGTGIRVTVISPGLVET  188 (246)
T ss_pred             -------CCCCcc-chhhHHHHHHHHHHHHHHh-cCCCeeEEEecCceecc
Confidence                   111111 443        33333333 45679999999998855

>PRK09242 tropinone reductase; Provisional

Probab=99.26  E-value=2.2e-10  Score=104.14  Aligned_cols=158  Identities=16%  Similarity=-0.002  Sum_probs=102.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|++|||||+|.||++++++|.+     +|++|++++|+....         .....++.++.+|+++.+++..++.  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLG-----LGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            358999999999999999999998     899999999975321         0012357788999999987665554  


Q ss_pred             -----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 -----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           .+|.|+|+++.....      .++....+++|+.++.++++++...  ..+..+++++||...+       ..  
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~-------~~--  153 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL-------TH--  153 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC-------CC--
Confidence                 356677776542111      1144567899999999998887542  1124567777643211       10  


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                           .      .....  |+.     +.++..+.  ....++++..++|+.+..+
T Consensus       154 -----~------~~~~~--Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~  196 (257)
T PRK09242        154 -----V------RSGAP--YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTP  196 (257)
T ss_pred             -----C------CCCcc--hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCc
Confidence                 0      01111  332     33332221  1346899999999999874

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.26  E-value=6.5e-11  Score=107.48  Aligned_cols=116  Identities=17%  Similarity=0.107  Sum_probs=84.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+++||||||+|+||.+++++|++     +|++|++++|+....    ......+..+.+|+++.+++..++.       
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAA-----KGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999998     899999999975321    0112346689999999988776654       


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      .+|.|+|+++......      .+....+++|+.++.++++++...  .....+++++||
T Consensus        89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  148 (255)
T PRK06841         89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS  148 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            4577888876432111      133557899999999999988653  112457777764

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.26  E-value=5.7e-11  Score=108.22  Aligned_cols=116  Identities=17%  Similarity=0.078  Sum_probs=83.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC---CCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....      ..   ...++.++.+|++|++++..+++  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~-----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAR-----EGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence            357999999999999999999998     899999999965321      00   12357789999999988777665  


Q ss_pred             -----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 -----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                           .+|.++|+|+.....      .++....+++|+.++.++++++...  .....+++++||
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  145 (260)
T PRK07063         81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIAS  145 (260)
T ss_pred             HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECC
Confidence                 467788887643211      1134566889999998888877543  112356777664

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.26  E-value=7.4e-11  Score=107.20  Aligned_cols=115  Identities=17%  Similarity=0.092  Sum_probs=78.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHc-------cCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLS-------QLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~   96 (397)
                      +|+++||||+|+||.+++++|.+     .|++|+++.|+.....  ....++.++.+|++|++++.++++       .+|
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLR-----EGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD   81 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999     8999988877543210  111257889999999988777665       457


Q ss_pred             CeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           97 DVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        97 ~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      .|+|+++.....    .  ++....+++|+.++..+..++.+.  ..+..+++++||
T Consensus        82 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS  138 (255)
T PRK06463         82 VLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIAS  138 (255)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            788887643211    0  134567889999965554443221  112356777765

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.25  E-value=5.1e-11  Score=108.71  Aligned_cols=116  Identities=20%  Similarity=0.212  Sum_probs=82.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .++++|||||+|+||++++++|++     +|++|++++|+....     . ....++.++.+|+++.+++..++.     
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFAR-----HGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975311     0 012356789999999988777655     


Q ss_pred             --cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                        .+|.|+|.++......  +    ..+..+++|+.++.++++++...  .....+++++||
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS  141 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSS  141 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence              3567888876432211  1    23456889999999998887643  112346666653

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1.4e-10  Score=106.61  Aligned_cols=104  Identities=15%  Similarity=0.039  Sum_probs=78.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------------CCCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------------NADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------------~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      +++++|||||+|+||++++++|++     +|++|++++|+.....              ....++.++.+|+++++++..
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAAR-----DGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            347899999999999999999998     8999999999753210              011356788999999988776


Q ss_pred             HHc-------cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc
Q 015961           91 KLS-------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        91 ~~~-------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                      ++.       .+|.|+|+|+......  +    +....+++|+.++.++++++...
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  135 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH  135 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence            665       4677888876532211  1    34557789999999999988653

>PRK08017 oxidoreductase; Provisional

Probab=99.25  E-value=9.7e-11  Score=106.38  Aligned_cols=114  Identities=17%  Similarity=0.160  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHcc--------C
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--------L   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~--------~   95 (397)
                      |.++||||||+|+||.++++.|++     +|++|++++|+.... .....+++.+.+|+.|.+++..++..        +
T Consensus         1 m~k~vlVtGasg~IG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          1 MQKSVLITGCSSGIGLEAALELKR-----RGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            457899999999999999999998     899999999975432 11123578899999999877665543        3


Q ss_pred             CCeeEEEEecccCC------CcHHHHHHhHHHHHHHH----HHHHcccCCCcceEEEecC
Q 015961           96 TDVTHIFYVTWTNR------STEAENCKINGSMFRNV----LRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        96 ~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~l----l~a~~~~~~~~~~~~~~s~  145 (397)
                      +.++|.++......      +.....+++|+.|+.++    ++++++.+  ..+++++||
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~iv~~ss  133 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG--EGRIVMTSS  133 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CCEEEEEcC
Confidence            44667655321111      13456789999998776    45554432  456776664

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.25  E-value=4e-11  Score=109.47  Aligned_cols=116  Identities=20%  Similarity=0.122  Sum_probs=84.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .++++|||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|+++.+++..++.    
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAE-----AGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE   83 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999999975321      0 012357889999999988766554    


Q ss_pred             ---cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961           94 ---QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  145 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  145 (397)
                         .+|.|+|+|+.....  .    ++....+++|+.++.++++++...   .....+++.+|+
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS  147 (263)
T PRK07814         84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS  147 (263)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence               467789987642211  1    145677899999999999998642   112456776653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.24  E-value=1.4e-10  Score=105.36  Aligned_cols=116  Identities=16%  Similarity=0.052  Sum_probs=82.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      .+|+|+||||+|+||++++++|++     .|++|++++|++...      . ....++.++.+|++|++++..+++.   
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAG-----AGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999998     899999999975321      0 0123578999999999887766653   


Q ss_pred             ----CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           95 ----LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                          +|.|+|.++.....  .    ++.+..+++|+.++.++.+++.+.  .....+++++|+
T Consensus        85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss  147 (256)
T PRK06124         85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITS  147 (256)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEee
Confidence                45678876542211  0    134556889999999988776542  122456776664

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.24  E-value=7.5e-11  Score=107.24  Aligned_cols=104  Identities=20%  Similarity=0.103  Sum_probs=78.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ..+++||||||+|+||++++++|++     .|++|+++.|+....      . ....++.++.+|+++.+++.+.++   
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQ-----AGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4568999999999999999999998     899999999975321      0 012357899999999988877665   


Q ss_pred             ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcc
Q 015961           94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                          .+|.++|+++.....      ..+.+..+++|+.++.++++++..
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (258)
T PRK06949         82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAK  130 (258)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence                367788887642211      114566788999999988887753

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.1e-10  Score=106.51  Aligned_cols=116  Identities=12%  Similarity=0.116  Sum_probs=82.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .++++|||||+|.||.+++++|++     +|++|++++|+....  .  ....++.++.+|++|.+++.++++       
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVA-----AGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            458999999999999999999998     899999999975421  0  012357889999999988777665       


Q ss_pred             cCCCeeEEEEecccC---C--CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961           94 QLTDVTHIFYVTWTN---R--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  145 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~---~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  145 (397)
                      .+|.++|+|+.....   .  +.....+++|+.++.++++++...- .+-.+++++||
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS  137 (261)
T PRK08265         80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS  137 (261)
T ss_pred             CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence            356788876532111   1  1345678899999998888776431 12346666664

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.23  E-value=9.9e-11  Score=106.54  Aligned_cols=157  Identities=14%  Similarity=0.094  Sum_probs=102.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      ++|+||||||+|+||.+++++|++     .|++|+++.|+....     . ....++.++.+|++|.+++..+++     
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAK-----AGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999998     899999999873211     0 012357899999999988777665     


Q ss_pred             --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.++|+++.....      .++.+..+++|+.++.++++++...  ..+..+++++|+...+.+            
T Consensus        89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  156 (258)
T PRK06935         89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG------------  156 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC------------
Confidence              467788887643211      1134567789999988777766543  122456777764322211            


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                      .      +  ..+.  |+.     +.+...+..  ...|+++.+++|+.|..
T Consensus       157 ~------~--~~~~--Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t  198 (258)
T PRK06935        157 G------K--FVPA--YTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKT  198 (258)
T ss_pred             C------C--Cchh--hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccc
Confidence            0      0  0011  442     333332221  34579999999998876

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.3e-10  Score=105.48  Aligned_cols=116  Identities=18%  Similarity=0.031  Sum_probs=80.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|++|||||+|.||.+++++|.+     .|++|++++|++.+.      . ....++.++.+|++|++++.++++    
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAR-----EGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999999975421      0 011357789999999988776665    


Q ss_pred             ---cCCCeeEEEEeccc--CC-----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 ---QLTDVTHIFYVTWT--NR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~--~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                         .+|.++|.|+....  ..     ++....+++|+.++..+.+++...  ..+..+++++||
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS  143 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTST  143 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence               45667777664211  10     134567899998877765554332  112346776664

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.22  E-value=2.3e-10  Score=102.88  Aligned_cols=115  Identities=17%  Similarity=0.097  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCH--HHHHHH---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDP--EETQAK---   91 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~--~~l~~~---   91 (397)
                      .+++|+||||+|+||.+++++|++     +|++|++++|+....        ......+.++.+|+.+.  +++..+   
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAA-----AGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAAT   79 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHH-----cCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHH
Confidence            357999999999999999999998     899999999976421        00113456788999753  333322   


Q ss_pred             ----H-ccCCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 015961           92 ----L-SQLTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT  144 (397)
Q Consensus        92 ----~-~~~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s  144 (397)
                          + ..+|.|+|+|+.....   .+    +....+++|+.++.++++++.+.  ...-.+++++|
T Consensus        80 i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s  146 (239)
T PRK08703         80 IAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVG  146 (239)
T ss_pred             HHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence                2 3467799998753211   11    34456899999999988887653  11124555554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.22  E-value=1.1e-10  Score=105.97  Aligned_cols=158  Identities=11%  Similarity=0.008  Sum_probs=103.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....      .. ...++..+.+|++|.+++.+++..   
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~-----~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAE-----YGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999998     899999999975321      00 113567889999999887766543   


Q ss_pred             ----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          +|.|+|+++.....      .++....+++|+.++.++++++...  ..+..+++++||...      .++.    
T Consensus        83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~------~~~~----  152 (254)
T PRK08085         83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS------ELGR----  152 (254)
T ss_pred             hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh------ccCC----
Confidence                57788887643211      1134567899999998888877653  122456777664211      1110    


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                                .....  |+.     +.+...+..  ...|+++..++|+.+..+
T Consensus       153 ----------~~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~  194 (254)
T PRK08085        153 ----------DTITP--YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTE  194 (254)
T ss_pred             ----------CCCcc--hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCc
Confidence                      01112  332     333333221  345899999999999884

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.6e-10  Score=104.95  Aligned_cols=159  Identities=13%  Similarity=-0.004  Sum_probs=101.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      +|++|||||+|+||++++++|.+     .|++|++++|+....       .. ...++.++.+|++|++++.+++..   
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQ-----AGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            57999999999999999999998     899999999875321       00 123577899999999887766554   


Q ss_pred             ----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          +|.++|+|+.....      .++.+..+++|+.++..+++++...  ..+..+++++||...+      .+.    
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------~~~----  152 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI------IVN----  152 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc------CCC----
Confidence                46788887643211      1134667889999998777765432  1123466666642211      110    


Q ss_pred             CCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          163 DPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                      ..        .+  ...|+..|     +.....  ....|+++.+++|+.+..+
T Consensus       153 ~~--------~~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~  196 (254)
T PRK06114        153 RG--------LL--QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATP  196 (254)
T ss_pred             CC--------CC--cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCc
Confidence            00        00  11254322     222221  1356899999999998773

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1e-10  Score=106.05  Aligned_cols=115  Identities=19%  Similarity=0.120  Sum_probs=81.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      +|+||||||+|+||.+++++|++     .|++|++++|+....      . ....++.++.+|++|.+++..+++.    
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAR-----EGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999998     899999999975321      0 0123578899999999887776654    


Q ss_pred             ---CCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           95 ---LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                         +|.|+|+++......       ++..+.+++|+.++.++++++...  ..+..+++++||
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS  144 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTAS  144 (253)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence               477888876422111       144567889999997776654322  112356776664

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.2e-10  Score=106.24  Aligned_cols=115  Identities=18%  Similarity=0.151  Sum_probs=82.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc------
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      +++||||||+|+||.+++++|++     +|++|++++|++...      .....++.++.+|++|.+++..+++      
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAA-----AGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            57899999999999999999998     899999999975321      1112468899999999987766544      


Q ss_pred             cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      .+|.|+|+|+.....  .    +.....+++|+.|+.++++++...  .....+++++||
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS  139 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS  139 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence            457788887643211  1    134567789999999999888653  112345665553

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.21  E-value=1.2e-10  Score=106.52  Aligned_cols=117  Identities=16%  Similarity=0.026  Sum_probs=82.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      .++++||||||+|+||++++++|++     .|++|++++|++...      . ....++.++.+|++|.+++..+++.  
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFAR-----AGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIA   81 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHH
Confidence            3458999999999999999999998     899999999975321      0 0113567889999999887776644  


Q ss_pred             -----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961           95 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  145 (397)
Q Consensus        95 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  145 (397)
                           +|.++|+|+.....      .++....+++|+.++.++++++...- .+-.+++++|+
T Consensus        82 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss  144 (264)
T PRK07576         82 DEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISA  144 (264)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence                 57788876532111      11345667899999999998876531 11136666654

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.21  E-value=8.6e-11  Score=106.57  Aligned_cols=115  Identities=16%  Similarity=0.038  Sum_probs=82.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +|++|||||+|.||+++++.|++     .|++|++++|+....      .. ...++.++.+|++|++++.+++.     
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAE-----EGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK   75 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999998     899999999975321      00 12467889999999988766554     


Q ss_pred             --cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  145 (397)
                        .+|.|+|+++......  +    .....+++|+.++.++++++.+.   ...-.+++++|+
T Consensus        76 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  138 (252)
T PRK07677         76 FGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVA  138 (252)
T ss_pred             hCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcC
Confidence              3566888765322111  1    34667899999999999988542   111356776664

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.21  E-value=3e-10  Score=101.44  Aligned_cols=110  Identities=16%  Similarity=0.052  Sum_probs=80.4

Q ss_pred             EEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc---CCCeeE
Q 015961           30 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH  100 (397)
Q Consensus        30 LVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V~h  100 (397)
                      |||||+|+||++++++|++     +|++|++++|++...      .....+++++.+|++|.+++.+++..   +|.++|
T Consensus         1 lItGas~~iG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAA-----EGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence            6999999999999999999     899999999974321      00124678899999999999888876   456777


Q ss_pred             EEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCC
Q 015961          101 IFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT  146 (397)
Q Consensus       101 ~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~  146 (397)
                      .++.....      .++....+++|+.++.+++++....  ...+++++||.
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~g~iv~~ss~  125 (230)
T PRK07041         76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA--PGGSLTFVSGF  125 (230)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc--CCeEEEEECch
Confidence            76542211      1145667899999999999855432  35677777643

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.21  E-value=2e-10  Score=104.52  Aligned_cols=159  Identities=13%  Similarity=0.042  Sum_probs=103.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .++|+|+||||+|+||++++++|.+     .|++ |++++|+.....       .....+.++.+|+++++++.+++.  
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~-----~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAE-----RGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAA   78 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHH-----CCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            3458899999999999999999998     7888 999998753210       012356788999999988776654  


Q ss_pred             -----cCCCeeEEEEecccC---CC---cHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWTN---RS---TEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~---~~---~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           ++|.|+|+++.....   ..   .....+++|+.++.++++++.+..   ....+++++|+...+       +. 
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~-------~~-  150 (260)
T PRK06198         79 DEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH-------GG-  150 (260)
T ss_pred             HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc-------cC-
Confidence                 467788987643211   11   235568999999999988875431   112467766643322       11 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                          .+        ....  |+.     +.+.....  ....+++++.++|+.+.++
T Consensus       151 ----~~--------~~~~--Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~  193 (260)
T PRK06198        151 ----QP--------FLAA--YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATE  193 (260)
T ss_pred             ----CC--------Ccch--hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCc
Confidence                00        0011  443     32222221  1345799999999999884

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.20  E-value=2.6e-10  Score=103.08  Aligned_cols=120  Identities=13%  Similarity=0.099  Sum_probs=82.1

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCC--CHHHHHH
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVS--DPEETQA   90 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~--d~~~l~~   90 (397)
                      .....+++||||||+|+||.+++++|++     .|++|++++|+....        .....++.++.+|+.  +.+++.+
T Consensus         7 ~~~~~~k~vlItG~~g~iG~~la~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~   81 (247)
T PRK08945          7 PDLLKDRIILVTGAGDGIGREAALTYAR-----HGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQ   81 (247)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHH-----CCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHH
Confidence            3455678999999999999999999998     899999999975321        001235677888886  4544333


Q ss_pred             -------HHccCCCeeEEEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           91 -------KLSQLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        91 -------~~~~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                             .+..+|.|+|.|+.....    .   +.....+++|+.++.++++++...  ..+..+|+++|+
T Consensus        82 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss  152 (247)
T PRK08945         82 LADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS  152 (247)
T ss_pred             HHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence                   234567799987643221    1   134667899999988888877532  123567777664

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.20  E-value=1.6e-10  Score=105.04  Aligned_cols=116  Identities=13%  Similarity=0.048  Sum_probs=82.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|+||||||+|+||.+++++|.+     .|++|++++|+....      . ....++.++.+|++|.+++.+++.    
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~-----~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFAT-----AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999998     899999999864321      0 011356788999999988766554    


Q ss_pred             ---cCCCeeEEEEecccC-C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 ---QLTDVTHIFYVTWTN-R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                         .+|.++|+++..... .    +.....+++|+.++.++++++...  .....+++++||
T Consensus        85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  146 (255)
T PRK06113         85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS  146 (255)
T ss_pred             HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence               356788887643211 1    134556899999999999988642  112246776664

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.19  E-value=3.2e-10  Score=102.83  Aligned_cols=158  Identities=10%  Similarity=0.028  Sum_probs=98.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC-CCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|++|||||+|+||.+++++|++     .|++|+++.++. ...      . .....+..+.+|+++.+++...+.   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLAN-----DGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD   77 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHH
Confidence            358999999999999999999998     899998875432 210      0 011345678899999875543321   


Q ss_pred             ----------cCCCeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccC
Q 015961           94 ----------QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 ----------~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                                .+|.++|+|+.....  .+    ..+..+++|+.++..+++++...-.+-.+++++||...+.       
T Consensus        78 ~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-------  150 (252)
T PRK12747         78 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-------  150 (252)
T ss_pred             HHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-------
Confidence                      467788887743211  11    2356678999999999987765422224677776432111       


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                             +..      ....  |+.     +.+...+.  ....|+++..+.|+.|.++
T Consensus       151 -------~~~------~~~~--Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~  194 (252)
T PRK12747        151 -------SLP------DFIA--YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTD  194 (252)
T ss_pred             -------CCC------Cchh--HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCc
Confidence                   000      1112  543     22222221  1356899999999999873

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.19  E-value=1.8e-10  Score=104.40  Aligned_cols=117  Identities=13%  Similarity=0.083  Sum_probs=81.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .++|+||||||+|+||.+++++|++     .|++|++++|+....      . .....+.++++|+.|.+++..+++   
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQ-----QGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            4468999999999999999999998     899999999975321      0 011346788999999987766554   


Q ss_pred             ----cCCCeeEEEEeccc--C--CC---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 ----QLTDVTHIFYVTWT--N--RS---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~--~--~~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                          .+|.++|+++....  .  ..   .....+++|+.++.++++++.+.  .....+++++||
T Consensus        81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  145 (252)
T PRK07035         81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS  145 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence                35668887753110  1  11   34567889999998888777443  123456776664

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.19  E-value=2.9e-10  Score=107.42  Aligned_cols=117  Identities=18%  Similarity=0.052  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+++|+||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|.++++++++    
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~-----~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFAR-----RGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999998     899999999975321      0 012357789999999998877654    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT  146 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~  146 (397)
                         .+|.++|.++......      +.....+++|+.|+.++..++...  ..+..+++++||.
T Consensus        82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~  145 (334)
T PRK07109         82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSA  145 (334)
T ss_pred             HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCCh
Confidence               4677888876422111      133456788888776655544332  1123567777653

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.18  E-value=1.7e-10  Score=105.48  Aligned_cols=158  Identities=15%  Similarity=0.074  Sum_probs=102.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      .+|++|||||+|+||.+++++|++     .|++|+++.|+....      .. ...++.++++|++|.+++..++..   
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAK-----AGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999998     899999998875321      10 113578899999999887776643   


Q ss_pred             ----CCCeeEEEEecccC---C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ----LTDVTHIFYVTWTN---R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~---~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          +|.++|+++.....   .   +.....+++|+.++..+++++...  ..+..+++++||..      ..++.    
T Consensus        84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~------~~~~~----  153 (265)
T PRK07097         84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM------SELGR----  153 (265)
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc------ccCCC----
Confidence                56788887653221   1   134566789999988887776542  11245677666321      11211    


Q ss_pred             CCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                                .....  |+.     +.+...+.  ....|+.+..++|+.+..+
T Consensus       154 ----------~~~~~--Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  195 (265)
T PRK07097        154 ----------ETVSA--YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATP  195 (265)
T ss_pred             ----------CCCcc--HHHHHHHHHHHHHHHHHHhhhcCceEEEEEecccccc
Confidence                      01112  442     33333222  1346899999999999874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.18  E-value=2.1e-10  Score=103.95  Aligned_cols=117  Identities=15%  Similarity=0.123  Sum_probs=82.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      .+|++|||||+|.||.+++++|++     .|++|++++|+....    . ....++.++.+|++|.+++.++++      
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAK-----AGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            358999999999999999999999     899999998864211    0 012357789999999988877665      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGT  146 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~  146 (397)
                       .+|.++|.|+......      ++.+..+++|+.++..+.+++...   ...-.+++++||.
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~  144 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASM  144 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCCh
Confidence             3566778766432111      144567889999988888876543   1112467777643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.18  E-value=4.4e-10  Score=115.47  Aligned_cols=156  Identities=13%  Similarity=0.075  Sum_probs=99.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|+||||||+|+||++++++|++     .|++|++++|+....      .   .....+..+.+|++|.+++.++++  
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~-----~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i  487 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAA-----EGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV  487 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence            458999999999999999999998     899999999975321      0   011246688999999998877765  


Q ss_pred             -----cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           ++|.|+|+|+......  +    .....+++|+.+...+..++...   ...-.+++++||...      .++. 
T Consensus       488 ~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a------~~~~-  560 (676)
T TIGR02632       488 ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA------VYAG-  560 (676)
T ss_pred             HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh------cCCC-
Confidence                 4677899887533211  1    23456788888877665444322   111235666664211      1110 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCcee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIF  207 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~  207 (397)
                                    + ....|+.     +.+...+..  ...|+++..++|+.|+
T Consensus       561 --------------~-~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       561 --------------K-NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             --------------C-CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence                          0 0122554     333333221  2457999999999887

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.18  E-value=3e-10  Score=103.07  Aligned_cols=103  Identities=17%  Similarity=0.026  Sum_probs=76.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|++|||||+|.||.+++++|++     .|++|++++|+....      . ....++..+.+|++|++++.++++    
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVE-----AGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 012357788999999988766654    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcc
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                         .+|.++|+++......      +.....+++|+.++..+++++..
T Consensus        83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (253)
T PRK05867         83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK  130 (253)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHH
Confidence               5677888876432111      13355678999999999888754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.18  E-value=2.2e-10  Score=103.35  Aligned_cols=115  Identities=19%  Similarity=0.200  Sum_probs=78.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-----NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|.+|||||+|+||++++++|++     .|++|+++.++....   .     .....+..+.+|+.|.+++.++++    
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHK-----DGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----cCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999     899988865432111   0     011246678999999988776654    


Q ss_pred             ---cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                         .+|.|+|+++.....      .++....+++|+.++.++.+++...  .....+++++||
T Consensus        78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS  140 (246)
T PRK12938         78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS  140 (246)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence               467788887643211      1144667899999977766655432  123457777764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.17  E-value=4.2e-10  Score=101.85  Aligned_cols=112  Identities=18%  Similarity=0.092  Sum_probs=78.2

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC---CCCCceEEEccCCCHHHHHHHHc----
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN---ADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~---~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +||||||+|+||.++++.|++     +|++|++++|+....       ..   ....+..+.+|++|.+++.++++    
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAE-----QGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD   75 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH
Confidence            489999999999999999998     899999999973211       00   01123457899999988766554    


Q ss_pred             ---cCCCeeEEEEecccCC--C----cHHHHHHhHHH----HHHHHHHHHcccCCCcceEEEecCC
Q 015961           94 ---QLTDVTHIFYVTWTNR--S----TEAENCKINGS----MFRNVLRAVIPNAPNLRHVCLQTGT  146 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~----gt~~ll~a~~~~~~~~~~~~~~s~~  146 (397)
                         .+|.|+|+++......  +    +....+++|+.    +++++++++++.+  ..+++++||.
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~ss~  139 (251)
T PRK07069         76 AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ--PASIVNISSV  139 (251)
T ss_pred             HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CcEEEEecCh
Confidence               4577888876432211  1    23456778888    7777888777543  5677877753

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.17  E-value=3.8e-10  Score=103.58  Aligned_cols=114  Identities=15%  Similarity=0.070  Sum_probs=79.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      |+++||||+|+||.+++++|++     .|++|++++|+....      .  .....+.++.+|++|++++.+++.     
T Consensus         1 k~vlItGas~giG~~la~~la~-----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAA-----QGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAA   75 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHh
Confidence            4799999999999999999998     899999999875321      0  011224567899999987765554     


Q ss_pred             --cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  145 (397)
                        .+|.|+|+++.....  .    ++....+++|+.++.++++++...   .....+++++||
T Consensus        76 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS  138 (272)
T PRK07832         76 HGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSS  138 (272)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence              357788887642111  1    134667899999999999987532   112346776664

>PRK08589 short chain dehydrogenase; Validated

Probab=99.16  E-value=4.4e-10  Score=103.17  Aligned_cols=157  Identities=12%  Similarity=0.000  Sum_probs=99.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+....     . ....++.++.+|++|.+++..+++     
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQ-----EGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999     899999999972110     0 012357889999999987766554     


Q ss_pred             --cCCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.++|.|+.....   .+    ..+..+++|+.++..+++++... ..+-.+++++||...+.      +      
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------  147 (272)
T PRK08589         80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQA------A------  147 (272)
T ss_pred             cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcC------C------
Confidence              356688887643211   11    23456788999987777765543 11114677766432111      0      


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                      .         +. ...|+.     +.+...+.  ....|+++..+.|+.|..
T Consensus       148 ~---------~~-~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  189 (272)
T PRK08589        148 D---------LY-RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIET  189 (272)
T ss_pred             C---------CC-CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence            0         00 112543     22222221  134679999999999876

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.16  E-value=3.1e-10  Score=104.51  Aligned_cols=157  Identities=14%  Similarity=0.032  Sum_probs=100.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +|+++||||+|+||++++++|++     +|++|++++|+....      .. ...++.++++|+.|.+++..++.     
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELAR-----AGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999998     899999999975321      00 11357789999999987766554     


Q ss_pred             --cCCCeeEEEEecccC---------------------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCcc
Q 015961           94 --QLTDVTHIFYVTWTN---------------------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKH  148 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~---------------------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~  148 (397)
                        .+|.++|+|+.....                     .++....+++|+.++..+++++.+.  ..+..+++++||...
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence              467788887632111                     1134567789999987666654332  112356776664322


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          149 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       149 y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                      |       .+             ......  |+.     +.+...+..  ...|+++..++|+.|..+
T Consensus       165 ~-------~~-------------~~~~~~--Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~  210 (278)
T PRK08277        165 F-------TP-------------LTKVPA--YSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTE  210 (278)
T ss_pred             c-------CC-------------CCCCch--hHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCc
Confidence            2       10             001111  443     222222221  345799999999999884

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.16  E-value=2.3e-10  Score=102.67  Aligned_cols=103  Identities=18%  Similarity=0.033  Sum_probs=75.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHcc-------C
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQ-------L   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~-------~   95 (397)
                      |+|++|||||+|.||.+++++|++     +|++|++++|++....  ....++.++.+|++|.+++...+..       +
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLA-----QGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            678999999999999999999998     8999999999764321  0112467899999999877665533       5


Q ss_pred             CCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHcc
Q 015961           96 TDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        96 ~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                      |.++|+|+.....  .    ++.+..+++|+.++..+.+++..
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~  118 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALED  118 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHH
Confidence            6688887642111  1    13456778999998877776654

>TIGR02415 23BDH acetoin reductases

Probab=99.16  E-value=2.6e-10  Score=103.41  Aligned_cols=114  Identities=15%  Similarity=0.064  Sum_probs=80.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      |++|||||+|+||.+++++|++     .|++|+++.|+....      . .....+.++.+|++|++++.+++.      
T Consensus         1 k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   75 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAK-----DGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF   75 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999998     899999999874321      0 012357789999999998777654      


Q ss_pred             -cCCCeeEEEEecccC---C---CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961           94 -QLTDVTHIFYVTWTN---R---STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  145 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~---~---~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  145 (397)
                       .+|.|+|+++.....   .   ...+..+++|+.++..+++++...   .....+++++||
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  137 (254)
T TIGR02415        76 GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAAS  137 (254)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence             357788887643211   1   133567889999988777766542   111256676653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.16  E-value=5e-10  Score=101.60  Aligned_cols=117  Identities=11%  Similarity=0.026  Sum_probs=82.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CC-CCCCceEEEccCCCHHHHHHHHc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN-ADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~-~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      .+|++|||||+|.||.+++++|.+     .|++|++++|.....    .. ....+..+++|++|.+++..+++      
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAE-----AGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            358999999999999999999998     899999888754211    00 12356789999999988776664      


Q ss_pred             -cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCC
Q 015961           94 -QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGT  146 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~  146 (397)
                       .+|.++|+|+.....      .++....+++|+.++.++++++...   ...-.+++++||.
T Consensus        84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~  146 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASM  146 (253)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECch
Confidence             367788887642211      1145667899999999998887543   1112456666643

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.15  E-value=6.2e-10  Score=101.61  Aligned_cols=156  Identities=13%  Similarity=0.065  Sum_probs=99.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHcc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+....      ..  ...++.++.+|++|++++..+++.  
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLAR-----AGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            458899999999999999999999     899999999975321      00  123578899999999888776653  


Q ss_pred             ----CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ----LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          +|.++|.++.....  .    ++.+..+++|+.+...+.+++...  ..+..+++++||...+.            
T Consensus        82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~------------  149 (263)
T PRK08339         82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE------------  149 (263)
T ss_pred             hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC------------
Confidence                56677776532211  1    134567788988766665554432  11235677776432110            


Q ss_pred             CCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                        +       .+. ...|+.        .+.++..+ ...|+++..+.|+.|-.
T Consensus       150 --~-------~~~-~~~y~asKaal~~l~~~la~el-~~~gIrVn~v~PG~v~T  192 (263)
T PRK08339        150 --P-------IPN-IALSNVVRISMAGLVRTLAKEL-GPKGITVNGIMPGIIRT  192 (263)
T ss_pred             --C-------CCc-chhhHHHHHHHHHHHHHHHHHh-cccCeEEEEEEeCcCcc
Confidence              0       010 011331        33333333 45689999999998865

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.14  E-value=7e-10  Score=101.33  Aligned_cols=117  Identities=15%  Similarity=0.069  Sum_probs=79.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc-
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      .++|++|||||+|.||.+++++|++     .|++|++++|+....      .   ....++..+.+|++|.+++.++++ 
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLE-----AGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAA   80 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH
Confidence            3568999999999999999999998     899999999975321      0   011356788999999988766554 


Q ss_pred             ------cCCCeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 ------QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                            .+|.++|+|+.....  .+    .....+++|+.+...+++++...  ..+..+++++||
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  146 (265)
T PRK07062         81 VEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNS  146 (265)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecc
Confidence                  356688877642211  01    34556788888876666655332  112346776664

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.14  E-value=4.4e-10  Score=101.73  Aligned_cols=114  Identities=11%  Similarity=0.100  Sum_probs=75.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccC------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQL------   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~------   95 (397)
                      |+||||||+|+||++++++|++     +|++|++++|.+.+.     .....+++++.+|++|.+++...++.+      
T Consensus         2 k~vlItGasggiG~~ia~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLE-----KGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHh-----cCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999998     899999999976221     011246789999999998887766542      


Q ss_pred             ---C--CeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecC
Q 015961           96 ---T--DVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG  145 (397)
Q Consensus        96 ---~--~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~  145 (397)
                         +  .++|.++......       +.....+++|+.+...+++++...-   ....+++++||
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS  141 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecc
Confidence               1  2445544322111       1345567789888666655543321   11346676664

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.14  E-value=6.9e-10  Score=103.98  Aligned_cols=121  Identities=11%  Similarity=0.072  Sum_probs=83.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      +|++++|||||++.||.+++++|++     +| ++|++++|+....      . .....+.++.+|++|.+++++++.  
T Consensus         1 ~~~k~vlITGas~GIG~aia~~L~~-----~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   75 (314)
T TIGR01289         1 QQKPTVIITGASSGLGLYAAKALAA-----TGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQF   75 (314)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHH-----cCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            4778999999999999999999998     79 9999999875321      1 012356788999999987766553  


Q ss_pred             -----cCCCeeEEEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccc
Q 015961           94 -----QLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHY  149 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y  149 (397)
                           .+|.++|.|+.....    .   +..+..+++|+.++..+.+++...    +.+-.+|+.+||...+
T Consensus        76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~  147 (314)
T TIGR01289        76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN  147 (314)
T ss_pred             HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence                 356677776642211    1   133556899999987776655432    1113578888876554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.14  E-value=5.9e-10  Score=94.79  Aligned_cols=112  Identities=22%  Similarity=0.089  Sum_probs=80.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCC----------CCCCceEEEccCCCHHHHHHHHcc-
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWN----------ADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~----------~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      ++++||||+|+||.+++++|.+     +|+ .|+++.|+......          ...++.++.+|+++.+++...+.. 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~-----~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   75 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAE-----RGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAI   75 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHH-----hhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            4799999999999999999998     675 68888886543210          113566889999998877665543 


Q ss_pred             ------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           95 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        95 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                            +|.|+|.++......      ++....+++|+.++.++++++.+.  +..+++++|+
T Consensus        76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss  136 (180)
T smart00822       76 PARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSS  136 (180)
T ss_pred             HHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEcc
Confidence                  467888876432111      134667899999999999999764  3566776664

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK05855 short chain dehydrogenase; Validated

Probab=99.13  E-value=5.3e-10  Score=113.78  Aligned_cols=155  Identities=12%  Similarity=0.006  Sum_probs=103.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      .+++|||||+|+||++++++|.+     +|++|++++|+....      . ....++.++.+|++|++++.++++.    
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAR-----EGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999998     899999999975321      0 0113578899999999887776653    


Q ss_pred             ---CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         +|.++|+|+......      ++....+++|+.|+.++++++...   ...-.+|+++||...|...          
T Consensus       390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------  459 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS----------  459 (582)
T ss_pred             cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC----------
Confidence               577888877533211      134566789999999988876432   1112467777754333210          


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 + ....|+..|.        ++... ...|++++.++|+.|-.
T Consensus       460 -----------~-~~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t  500 (582)
T PRK05855        460 -----------R-SLPAYATSKAAVLMLSECLRAEL-AAAGIGVTAICPGFVDT  500 (582)
T ss_pred             -----------C-CCcHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEEeCCCcc
Confidence                       0 0112543322        22222 45689999999998754

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.13  E-value=5.2e-10  Score=105.33  Aligned_cols=116  Identities=16%  Similarity=0.086  Sum_probs=81.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+++||||||+|.||.+++++|++     +|++|++++|+....      . .....+.++.+|++|.+++..+++    
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~-----~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFAR-----RGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            357999999999999999999999     899999999975321      0 011356688999999988877653    


Q ss_pred             ---cCCCeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 ---QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                         .+|.++|+|+.....  .+    .....+++|+.++.++.+++...  ..+..+++.+||
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS  143 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMIS  143 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence               467788887643221  11    33457899999998887776432  111245665553

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.12  E-value=2.9e-10  Score=103.68  Aligned_cols=103  Identities=14%  Similarity=0.091  Sum_probs=76.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      +|+++||||+|+||.+++++|++     .|++|++++|+....  .  .....+..+.+|+.|.+++.++++       .
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVA-----EGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999     899999999975321  0  012357789999999887766554       4


Q ss_pred             CCCeeEEEEeccc--C-CC--------cHHHHHHhHHHHHHHHHHHHccc
Q 015961           95 LTDVTHIFYVTWT--N-RS--------TEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        95 ~~~V~h~a~~~~~--~-~~--------~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                      +|.++|+|+....  . .+        ..+..+++|+.++.++++++...
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  129 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPA  129 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHH
Confidence            5778888764211  1 01        23467899999999999988654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.12  E-value=5.2e-10  Score=115.65  Aligned_cols=159  Identities=11%  Similarity=0.066  Sum_probs=105.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      +..+|++|||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|++|.+++.++++  
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  442 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAE-----AGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDI  442 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            34468999999999999999999998     899999999975321      0 012357889999999998877765  


Q ss_pred             -----cCCCeeEEEEecccC--------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCC
Q 015961           94 -----QLTDVTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                           .+|.++|+|+.....        .++....+++|+.|+.++++++...  .....+++++||...|..       
T Consensus       443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------  515 (657)
T PRK07201        443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN-------  515 (657)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC-------
Confidence                 467788887643111        0134567899999998887766432  123457887775433211       


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                           .         +. ...|+..     .+...+.  ....|+.+++++|+.|..
T Consensus       516 -----~---------~~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T  557 (657)
T PRK07201        516 -----A---------PR-FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRT  557 (657)
T ss_pred             -----C---------CC-cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcc
Confidence                 0         00 1115432     2222211  134689999999999876

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.11  E-value=1.4e-09  Score=99.05  Aligned_cols=116  Identities=13%  Similarity=-0.043  Sum_probs=78.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ..+|++|||||+|.||.+++++|++     +|++|+++.|+....       . ....++.++.+|++|.+++.+.++  
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~-----~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~   79 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGK-----EKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTA   79 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            4568999999999999999999998     899998888854211       0 012356788999999988776654  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHH----cccCCCcceEEEecC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAV----IPNAPNLRHVCLQTG  145 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~~~~~~s~  145 (397)
                           .+|.++|+++......      +..+..+++|+.++.++++++    .+.+ .-.+++++||
T Consensus        80 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS  145 (261)
T PRK08936         80 VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSS  145 (261)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcc
Confidence                 3566888876432211      134456789988876655544    3322 1245666653

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.11  E-value=5.5e-10  Score=99.36  Aligned_cols=112  Identities=15%  Similarity=0.117  Sum_probs=80.1

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHc----cCCCeeEE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS----QLTDVTHI  101 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~----~~~~V~h~  101 (397)
                      +++||||+|.||+++++.|.+     +|++|++++|+....  .....+++++.+|++|++++.++++    .+|.++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRN-----DGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence            699999999999999999998     899999999975321  0011246788999999998877765    46778888


Q ss_pred             EEeccc---C--------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961          102 FYVTWT---N--------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus       102 a~~~~~---~--------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                      ++..+.   .        .++....+++|+.++.++++++...-..-.+++.+|
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~is  130 (223)
T PRK05884         77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVV  130 (223)
T ss_pred             CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Confidence            753211   0        113456679999999999988765411124566555

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.11  E-value=8.2e-10  Score=102.64  Aligned_cols=116  Identities=19%  Similarity=0.075  Sum_probs=82.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .+++||||||+|.||.+++++|.+     .|++|++++|+....      ......+..+.+|++|.+++..+++     
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHA-----RGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            458999999999999999999998     899999999975321      1111245566799999988766654     


Q ss_pred             --cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~  145 (397)
                        .+|.|+|.|+.....  .    +..+..+++|+.++.++++++... ..+..+++.+||
T Consensus        83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS  143 (296)
T PRK05872         83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS  143 (296)
T ss_pred             cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence              467788887653211  1    133567889999999999887643 112346777764

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.10  E-value=7e-10  Score=101.96  Aligned_cols=101  Identities=20%  Similarity=0.162  Sum_probs=76.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      |+|.++|||| |+||++++++|.      +|++|++++|+....      .. ...++.++.+|++|.+++..+++    
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~   73 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT   73 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence            7789999998 799999999994      589999999975321      00 11357789999999988777664    


Q ss_pred             --cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHccc
Q 015961           94 --QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                        .+|.++|+|+.. ....+....+++|+.++.++++++...
T Consensus        74 ~g~id~li~nAG~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~  114 (275)
T PRK06940         74 LGPVTGLVHTAGVS-PSQASPEAILKVDLYGTALVLEEFGKV  114 (275)
T ss_pred             cCCCCEEEECCCcC-CchhhHHHHHHHhhHHHHHHHHHHHHH
Confidence              356678876642 223467788999999999999988654

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.10  E-value=1.6e-09  Score=98.85  Aligned_cols=159  Identities=12%  Similarity=-0.004  Sum_probs=101.0

Q ss_pred             CCCCEEEEEcCCC-hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTG-IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatG-fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ..++++|||||+| -||..+++.|++     +|++|++++|+....      .   ....++.++.+|+++++++..+++
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   89 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALE-----EGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID   89 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence            3468999999998 599999999998     899999998865321      0   111357789999999988776664


Q ss_pred             -------cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccC
Q 015961           94 -------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                             .+|.++|+++.....  .    +.....+++|+.++..+++++...   ...-.+++.+++.         .+
T Consensus        90 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~---------~~  160 (262)
T PRK07831         90 AAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASV---------LG  160 (262)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCch---------hh
Confidence                   357788887642211  1    134556789999999888877543   1112355554431         11


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                      .     .+.      ..  ...|+.     +.+...+..  ...|+++..++|+.+..+
T Consensus       161 ~-----~~~------~~--~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~  206 (262)
T PRK07831        161 W-----RAQ------HG--QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHP  206 (262)
T ss_pred             c-----CCC------CC--CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCc
Confidence            1     000      01  112443     333332221  346899999999998873

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.09  E-value=1.2e-09  Score=95.43  Aligned_cols=102  Identities=16%  Similarity=0.120  Sum_probs=74.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc---cCCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---QLTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~---~~~~V~h~a~  103 (397)
                      +++|||||+|.||.+++++|.+     + ++|++++|++.          .+++|++|.++++.+++   .+|.++|.++
T Consensus         1 ~~vlItGas~giG~~la~~l~~-----~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag   64 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSK-----R-HEVITAGRSSG----------DVQVDITDPASIRALFEKVGKVDAVVSAAG   64 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHh-----c-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcCCCCEEEECCC
Confidence            3799999999999999999998     6 78999998642          46899999998888776   4566777765


Q ss_pred             ecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961          104 VTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus       104 ~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                      ......      ++....+++|+.++.++++++...-.+-..++++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  111 (199)
T PRK07578         65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS  111 (199)
T ss_pred             CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence            422111      13455678999999999998865421224566555

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.08  E-value=1.9e-09  Score=101.31  Aligned_cols=159  Identities=20%  Similarity=0.189  Sum_probs=95.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC----CCCCceEEEccCCCHHHHHHHHccCCC-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN----ADHLVEYVQCDVSDPEETQAKLSQLTD-   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~----~~~~v~~~~~Dl~d~~~l~~~~~~~~~-   97 (397)
                      ...+|||+||||.+|+.+++.|++     +|+.|++++|+....  ..    .+.....+..|.....+....+..... 
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llk-----rgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~  152 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLK-----RGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK  152 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHH-----CCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence            346899999999999999999999     899999999986543  11    234455566665555443333322221 


Q ss_pred             --eeEEEEecccCCC-cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           98 --VTHIFYVTWTNRS-TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        98 --V~h~a~~~~~~~~-~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                        ++...+....+.. +-..-..+...|+.|+++||+.++  ++|++++++          +|...     .  +.+...
T Consensus       153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG--vk~~vlv~s----------i~~~~-----~--~~~~~~  213 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG--VKRVVLVGS----------IGGTK-----F--NQPPNI  213 (411)
T ss_pred             cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC--CceEEEEEe----------ecCcc-----c--CCCchh
Confidence              1222211111111 112334688899999999998765  899998863          22110     0  001000


Q ss_pred             CC-Ccch-hHHHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          175 AP-NFYY-TLEDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       175 ~~-~~~y-~~e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      .. ...+ .....+..+. ++.|++++|+||+...-
T Consensus       214 ~~~~~~~~~~k~~~e~~~-~~Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  214 LLLNGLVLKAKLKAEKFL-QDSGLPYTIIRPGGLEQ  248 (411)
T ss_pred             hhhhhhhhHHHHhHHHHH-HhcCCCcEEEecccccc
Confidence            00 1111 2234444444 78899999999987665

>PRK06484 short chain dehydrogenase; Validated

Probab=99.08  E-value=1e-09  Score=110.32  Aligned_cols=159  Identities=13%  Similarity=0.015  Sum_probs=104.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      ...+|++|||||+|.||.+++++|.+     +|++|++++|+....  .  .....+..+.+|++|++++.++++.    
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAA-----AGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999     899999999975321  0  0113456789999999887766643    


Q ss_pred             ---CCCeeEEEEeccc--C-C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           95 ---LTDVTHIFYVTWT--N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        95 ---~~~V~h~a~~~~~--~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                         +|.++|.|+....  . .    +..+..+++|+.++.++++++...-.+-.+|+++||...+      .+      .
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~------~  408 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL------LA------L  408 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc------CC------C
Confidence               5678888764311  1 1    1345678999999999988876642223467766642211      00      0


Q ss_pred             CCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                            +  .  ...|+.     +.+.....  ....|+++..+.|+.|..
T Consensus       409 ------~--~--~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t  449 (520)
T PRK06484        409 ------P--P--RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIET  449 (520)
T ss_pred             ------C--C--CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccC
Confidence                  0  1  112543     22222221  134689999999999977

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.07  E-value=6.8e-10  Score=101.33  Aligned_cols=116  Identities=17%  Similarity=0.067  Sum_probs=81.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|++|||||+|+||.+++++|++     .|++|++++|++...  .  ....++.++.+|++|.+++..+++       
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLA-----EGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFG   79 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence            357999999999999999999998     899999999975321  0  012357789999999987766654       


Q ss_pred             cCCCeeEEEEeccc--CC-C-c-------HHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961           94 QLTDVTHIFYVTWT--NR-S-T-------EAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  145 (397)
Q Consensus        94 ~~~~V~h~a~~~~~--~~-~-~-------~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  145 (397)
                      .+|.++|.|+....  .. + +       .+..+++|+.++..+++++...- ..-.++++++|
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS  143 (263)
T PRK06200         80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLS  143 (263)
T ss_pred             CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECC
Confidence            35778888764221  11 1 1       33457899999988888776531 11235666654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.06  E-value=7.6e-10  Score=99.78  Aligned_cols=104  Identities=17%  Similarity=0.159  Sum_probs=80.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      +++++|||||+|+||++++++|++     +|++|++++|+.....  ........+.+|++|.+++.+.+..+|.++|+|
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnA   87 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRA-----KGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNH   87 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence            357999999999999999999998     8999999998752211  011123578899999999988888899999998


Q ss_pred             EecccCC---CcHHHHHHhHHHHHHHHHHHHccc
Q 015961          103 YVTWTNR---STEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus       103 ~~~~~~~---~~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                      +......   ++....+++|+.++.++++++...
T Consensus        88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  121 (245)
T PRK12367         88 GINPGGRQDPENINKALEINALSSWRLLELFEDI  121 (245)
T ss_pred             ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            7532211   245677899999999999987653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.04  E-value=9.6e-10  Score=98.77  Aligned_cols=112  Identities=16%  Similarity=0.126  Sum_probs=77.2

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHcc------
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ------   94 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~~------   94 (397)
                      ||||||+|+||.+++++|.+     +|++|++++|+....       . ....++.++.+|++|.+++..+++.      
T Consensus         1 vlItGas~giG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAA-----DGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHG   75 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999998     899999998764221       0 0123588999999999887666543      


Q ss_pred             -CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHc-cc--CCCcceEEEecC
Q 015961           95 -LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVI-PN--APNLRHVCLQTG  145 (397)
Q Consensus        95 -~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~-~~--~~~~~~~~~~s~  145 (397)
                       .|.++|.++.....      .++....+++|+.++.++++++. ..  ..+..+++++||
T Consensus        76 ~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  136 (239)
T TIGR01831        76 AYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLAS  136 (239)
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence             35566765532111      11456678999999999988763 11  112356776664

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.03  E-value=2.1e-09  Score=87.75  Aligned_cols=151  Identities=18%  Similarity=0.229  Sum_probs=102.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  106 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~  106 (397)
                      +..+|.||||-.|+-|++++++.++.+   +|+++.|+..........+.....|....+++...+++.|..|.+-+.+.
T Consensus        19 ~s~fvlGAtG~~G~~llk~~~E~~~FS---KV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTR   95 (238)
T KOG4039|consen   19 MSGFVLGATGLCGGGLLKHAQEAPQFS---KVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTR   95 (238)
T ss_pred             cceEEEeccccccHHHHHHHHhcccce---eEEEEEeccCCCccccceeeeEEechHHHHHHHhhhcCCceEEEeecccc
Confidence            689999999999999999999976655   89999998644333446778889999888888889999987666544332


Q ss_pred             cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh-----
Q 015961          107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT-----  181 (397)
Q Consensus       107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~-----  181 (397)
                      ... ..+.++++..+-...+.+++++.  .+++|+++||...-.|                        +++.|-     
T Consensus        96 gka-GadgfykvDhDyvl~~A~~AKe~--Gck~fvLvSS~GAd~s------------------------SrFlY~k~KGE  148 (238)
T KOG4039|consen   96 GKA-GADGFYKVDHDYVLQLAQAAKEK--GCKTFVLVSSAGADPS------------------------SRFLYMKMKGE  148 (238)
T ss_pred             ccc-ccCceEeechHHHHHHHHHHHhC--CCeEEEEEeccCCCcc------------------------cceeeeeccch
Confidence            211 23334444444444566777764  4899999985432222                        233333     


Q ss_pred             HHHHHHHHHhcCCCe-eEEEEcCCceeeccCC
Q 015961          182 LEDILFEEVEKKEEL-SWSVHRPDTIFGFSPY  212 (397)
Q Consensus       182 ~e~~l~~~~~~~~g~-~~~ilRp~~v~G~~~~  212 (397)
                      .|+-+.+     ..+ .++|+||+.+.|..+.
T Consensus       149 vE~~v~e-----L~F~~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  149 VERDVIE-----LDFKHIIILRPGPLLGERTE  175 (238)
T ss_pred             hhhhhhh-----ccccEEEEecCcceeccccc
Confidence            2444443     233 6899999999995443

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.03  E-value=3.7e-09  Score=96.29  Aligned_cols=116  Identities=6%  Similarity=-0.061  Sum_probs=76.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      ++|+||||||++.||.+++++|++     .|++|+++.|+....       .  ....++.++.+|++|++++.+++.. 
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQ-----SGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            468999999999999999999999     899998887643211       0  0123577899999999877666543 


Q ss_pred             ------CCCeeEEEEeccc-------CC-----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           95 ------LTDVTHIFYVTWT-------NR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        95 ------~~~V~h~a~~~~~-------~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                            +|.++|.|+....       ..     ......+++|+.+...+.+++...  ..+-.+++++||
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  152 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSS  152 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEec
Confidence                  5667887753210       00     123445677887766555544332  112346777664

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.02  E-value=1.1e-09  Score=104.90  Aligned_cols=103  Identities=12%  Similarity=0.104  Sum_probs=80.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C-CCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ++|+|+||||+|+||++++++|.+     +|++|++++|++...   . .....+..+.+|++|.+++.+.+.++|.++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~-----~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQ-----QGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence            468999999999999999999998     899999999875321   0 0112466889999999999999999998899


Q ss_pred             EEEecccCCC---cHHHHHHhHHHHHHHHHHHHcc
Q 015961          101 IFYVTWTNRS---TEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus       101 ~a~~~~~~~~---~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                      .|+.......   +....+++|+.|+.++++++..
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp  286 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT  286 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8764322111   4467789999999999998754

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.02  E-value=2.7e-09  Score=99.63  Aligned_cols=103  Identities=15%  Similarity=-0.029  Sum_probs=76.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++.+|.....       . ....++.++.+|++|.+++..+++   
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~-----~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLAR-----LGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899999988753211       0 012357789999999987766554   


Q ss_pred             ---cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHcc
Q 015961           94 ---QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                         .+|.++|.|+.....    .  .+....+++|+.++.++++++..
T Consensus        86 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~  133 (306)
T PRK07792         86 GLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA  133 (306)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence               467788887653221    1  14566789999999999887753

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.02  E-value=1.3e-08  Score=91.11  Aligned_cols=114  Identities=19%  Similarity=0.157  Sum_probs=76.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH---ccCCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL---SQLTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~---~~~~~V~h~a~  103 (397)
                      |+|+||||+|+||++++++|++..   .++.|+...|..... ...+++.++++|++|.++++...   .++|.|+|+++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~---~~~~v~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG   76 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERY---PDATVHATYRHHKPD-FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVG   76 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhC---CCCEEEEEccCCccc-cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCc
Confidence            479999999999999999999821   145676666654332 12357889999999998766544   45677888877


Q ss_pred             ecccC----C----C----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEec
Q 015961          104 VTWTN----R----S----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQT  144 (397)
Q Consensus       104 ~~~~~----~----~----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s  144 (397)
                      .....    .    .    .....+++|+.++..+.+++...-  .+..+++.+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~is  131 (235)
T PRK09009         77 MLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVIS  131 (235)
T ss_pred             cccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEe
Confidence            54311    0    0    123567899999888877765531  1224555554

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.01  E-value=3.3e-09  Score=104.54  Aligned_cols=118  Identities=14%  Similarity=0.066  Sum_probs=83.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +..++++|||||+|.||..++++|.+     +|++|++++|+....    ....-+..++.+|++|.+++..++.     
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~-----~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLAR-----DGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            34568999999999999999999998     899999998853221    0011234688999999987766554     


Q ss_pred             --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  145 (397)
                        .+|.|+|+++.....      .+..+..+++|+.++.++.+++....  .+-.+|+++||
T Consensus       282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS  343 (450)
T PRK08261        282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS  343 (450)
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence              467788987643211      11345678899999999999887631  12256776664

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.97  E-value=5.9e-09  Score=95.39  Aligned_cols=101  Identities=17%  Similarity=0.139  Sum_probs=70.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC--CCCCceEEEccCCCHHHH----HHHH-
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN--ADHLVEYVQCDVSDPEET----QAKL-   92 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~--~~~~v~~~~~Dl~d~~~l----~~~~-   92 (397)
                      +.++||||+|+||.+++++|++     +|++|+++.|+....       +.  ....+.++.+|++|.+++    ++.+ 
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~   76 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQ-----EGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIID   76 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHh-----CCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHH
Confidence            4799999999999999999999     899999987653211       10  112455789999998644    2222 


Q ss_pred             ------ccCCCeeEEEEecccC----CC-------------cHHHHHHhHHHHHHHHHHHHcc
Q 015961           93 ------SQLTDVTHIFYVTWTN----RS-------------TEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        93 ------~~~~~V~h~a~~~~~~----~~-------------~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                            ..+|.|+|+|+.....    .+             .....+++|+.++..+++++..
T Consensus        77 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  139 (267)
T TIGR02685        77 ACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ  139 (267)
T ss_pred             HHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence                  3467788887642211    01             1345689999999988887654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.97  E-value=7.3e-09  Score=97.19  Aligned_cols=116  Identities=22%  Similarity=0.186  Sum_probs=78.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCC--HHH---HHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSD--PEE---TQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d--~~~---l~~   90 (397)
                      .++.++||||||.||.+++++|.+     +|++|++++|++...      .   .....+..+.+|+++  .+.   +.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~-----~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~  126 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLAR-----KGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKE  126 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHH
Confidence            468999999999999999999998     899999999976421      0   011246678899985  232   334


Q ss_pred             HHccCC--CeeEEEEecccC----CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           91 KLSQLT--DVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        91 ~~~~~~--~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      .+.+.|  .++|.|+.....    .+    .....+++|+.|+.++.+++...  ..+..+++.+||
T Consensus       127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS  193 (320)
T PLN02780        127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS  193 (320)
T ss_pred             HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence            444444  578887653211    11    23457899999999988877543  122456777764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=98.96  E-value=7.2e-09  Score=94.36  Aligned_cols=113  Identities=11%  Similarity=-0.022  Sum_probs=74.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      ++||||||+|.||+.++++|++     +|++|++++|++...      .....++.++.+|++|.+++.++++       
T Consensus         1 m~vlItGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g   75 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLK-----KGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG   75 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999998     899999999975321      1111357789999999988776664       


Q ss_pred             cCCCeeEEEEecccC----CC----cHHHHHHhHHHHHHHHHHH----HcccCCCcceEEEecC
Q 015961           94 QLTDVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRA----VIPNAPNLRHVCLQTG  145 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a----~~~~~~~~~~~~~~s~  145 (397)
                      .+|.++|.|+.....    .+    +....+.+|+.++..+..+    ..+. ..-.+++++||
T Consensus        76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~~g~iv~isS  138 (259)
T PRK08340         76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK-KMKGVLVYLSS  138 (259)
T ss_pred             CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc-CCCCEEEEEeC
Confidence            456678877642111    11    2233456777765444333    2211 12346776664

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.94  E-value=4.8e-09  Score=89.36  Aligned_cols=157  Identities=17%  Similarity=0.134  Sum_probs=102.5

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--CCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ++.+-...+.++.|+.||.|+++++.-..     .++.|-.+.|+..+...  ....+.+.++|.....-+...+.+.-.
T Consensus        46 ~~~dve~e~tlvlggnpfsgs~vlk~A~~-----vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~  120 (283)
T KOG4288|consen   46 DKQDVEVEWTLVLGGNPFSGSEVLKNATN-----VVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTF  120 (283)
T ss_pred             chhhhhHHHHhhhcCCCcchHHHHHHHHh-----hceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcc
Confidence            33333336789999999999999999988     89999999998544321  124678899998877666677776665


Q ss_pred             eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  177 (397)
Q Consensus        98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~  177 (397)
                      ++-+++    ...+...+.++|-....+-.+++.+.+  +++|+|+|..        .||-     .      |..|  .
T Consensus       121 v~e~~g----gfgn~~~m~~ing~ani~a~kaa~~~g--v~~fvyISa~--------d~~~-----~------~~i~--r  173 (283)
T KOG4288|consen  121 VYEMMG----GFGNIILMDRINGTANINAVKAAAKAG--VPRFVYISAH--------DFGL-----P------PLIP--R  173 (283)
T ss_pred             cHHHhc----CccchHHHHHhccHhhHHHHHHHHHcC--CceEEEEEhh--------hcCC-----C------Cccc--h
Confidence            655533    123445566677777777777777654  8899988721        2221     0      1111  2


Q ss_pred             cchh-HHHHHHHHHhcCCCeeEEEEcCCceeec
Q 015961          178 FYYT-LEDILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       178 ~~y~-~e~~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                      .|+. ....-.|.. +.++++-++|||+.|||.
T Consensus       174 GY~~gKR~AE~Ell-~~~~~rgiilRPGFiyg~  205 (283)
T KOG4288|consen  174 GYIEGKREAEAELL-KKFRFRGIILRPGFIYGT  205 (283)
T ss_pred             hhhccchHHHHHHH-HhcCCCceeeccceeecc
Confidence            2333 222222222 456788999999999995

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.92  E-value=1.2e-08  Score=92.43  Aligned_cols=115  Identities=15%  Similarity=0.092  Sum_probs=78.7

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .+|++|||||+  +-||..++++|++     .|++|++..|+....    ......+.++++|++|+++++++++     
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKD-----QGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHH-----CCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            45899999999  7999999999998     899999998863210    0112357789999999987765543     


Q ss_pred             --cCCCeeEEEEeccc-----C-C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961           94 --QLTDVTHIFYVTWT-----N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus        94 --~~~~V~h~a~~~~~-----~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                        .+|.++|.|+....     + .    ++.+..+++|+.++..+++++...-.+-.+++.+|
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~is  143 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLT  143 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEe
Confidence              35667777764321     0 1    13455678999998888877765311123555554

>PRK06125 short chain dehydrogenase; Provisional

Probab=98.92  E-value=2.8e-08  Score=90.41  Aligned_cols=114  Identities=15%  Similarity=0.065  Sum_probs=79.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHcc---
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      +|+||||||+|.||.++++.|++     .|++|++++|+....      ..  ...++.++.+|++|.+++..+++.   
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   81 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAA-----EGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD   81 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence            57999999999999999999998     899999999975321      00  123577899999999988776654   


Q ss_pred             CCCeeEEEEeccc--CCC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 015961           95 LTDVTHIFYVTWT--NRS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT  144 (397)
Q Consensus        95 ~~~V~h~a~~~~~--~~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s  144 (397)
                      +|.++|+++....  ..+    +....+++|+.+..++.+++...  ..+-.+++++|
T Consensus        82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~is  139 (259)
T PRK06125         82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVI  139 (259)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            5557777653211  011    34566789999998888876432  11123566555

>PRK06484 short chain dehydrogenase; Validated

Probab=98.89  E-value=1.4e-08  Score=102.08  Aligned_cols=116  Identities=16%  Similarity=0.053  Sum_probs=82.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC--CCCCceEEEccCCCHHHHHHHHcc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN--ADHLVEYVQCDVSDPEETQAKLSQ------   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~--~~~~v~~~~~Dl~d~~~l~~~~~~------   94 (397)
                      .+|++|||||++.||..++++|.+     .|++|++++|+....  ..  ...++.++.+|++|++++.++++.      
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFAR-----AGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999     899999999975431  00  113466799999999887666543      


Q ss_pred             -CCCeeEEEEeccc------CC--CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecC
Q 015961           95 -LTDVTHIFYVTWT------NR--STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG  145 (397)
Q Consensus        95 -~~~V~h~a~~~~~------~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~  145 (397)
                       +|.++|.|+....      ..  ++....+++|+.++..+++++...-   ..-.+++.+||
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS  141 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS  141 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence             5667887764211      01  1356678999999999888876541   11126666664

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.87  E-value=3.5e-08  Score=89.64  Aligned_cols=117  Identities=10%  Similarity=0.042  Sum_probs=75.9

Q ss_pred             CCCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCC---------C----C----C-CCCCCceEEEccCC
Q 015961           24 SYQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPK---------P----N----W-NADHLVEYVQCDVS   83 (397)
Q Consensus        24 ~~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~---------~----~----~-~~~~~v~~~~~Dl~   83 (397)
                      ..+|+||||||+|  .||.+++++|++     .|++|+++.|...         .    .    . .....+.++.+|++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~-----~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~   78 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAE-----AGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT   78 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            3468999999995  799999999999     8999988754210         0    0    0 01124668899999


Q ss_pred             CHHHHHHHHcc-------CCCeeEEEEecccC---CC---cHHHHHHhHHHHHHHHHHHHccc-C-CCcceEEEecC
Q 015961           84 DPEETQAKLSQ-------LTDVTHIFYVTWTN---RS---TEAENCKINGSMFRNVLRAVIPN-A-PNLRHVCLQTG  145 (397)
Q Consensus        84 d~~~l~~~~~~-------~~~V~h~a~~~~~~---~~---~~~~~~~~nv~gt~~ll~a~~~~-~-~~~~~~~~~s~  145 (397)
                      |.+++.+++..       .|.++|.|+.....   ..   .....+++|+.+...+..++... . ..-.+++++||
T Consensus        79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  155 (256)
T PRK12859         79 QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTS  155 (256)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence            99887666543       45577776542211   11   34456889999988776544332 1 12346776664

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.85  E-value=8e-08  Score=86.59  Aligned_cols=118  Identities=21%  Similarity=0.156  Sum_probs=81.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHH---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL---   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~---   92 (397)
                      .+|.|+|||||.-||.+++.+|.+     .|.+++.+.|+....         .....++.++++|++|.+++..++   
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~-----~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAK-----RGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHh-----CCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            358899999999999999999999     899888787764321         111125899999999999887654   


Q ss_pred             ----ccCCCeeEEEEecccCC-C-----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCc
Q 015961           93 ----SQLTDVTHIFYVTWTNR-S-----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTK  147 (397)
Q Consensus        93 ----~~~~~V~h~a~~~~~~~-~-----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~  147 (397)
                          .++|..++-|+.+.... +     +....+++|+.|+..+..++..+-  .+-.||+.+||+.
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia  152 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA  152 (282)
T ss_pred             HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence                33454444444332111 1     345578999999988888776541  1236777777543

>PRK07791 short chain dehydrogenase; Provisional

Probab=98.84  E-value=2.6e-08  Score=92.04  Aligned_cols=103  Identities=12%  Similarity=-0.028  Sum_probs=73.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC---------CCC------C-CCCCCceEEEccCCCHHH
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP---------KPN------W-NADHLVEYVQCDVSDPEE   87 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~---------~~~------~-~~~~~v~~~~~Dl~d~~~   87 (397)
                      .++|++|||||++.||.+++++|++     .|++|++++|+.         ...      . ....++.++.+|++|.++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~-----~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   78 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAA-----EGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDG   78 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHH
Confidence            3468999999999999999999998     899999888754         110      0 011346688999999987


Q ss_pred             HHHHHc-------cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHc
Q 015961           88 TQAKLS-------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        88 l~~~~~-------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~  131 (397)
                      +.++++       .+|.++|.|+.....  .    +.....+++|+.++..+++++.
T Consensus        79 v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  135 (286)
T PRK07791         79 AANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA  135 (286)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence            766553       356677776643211  1    1456678999999988877664

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.84  E-value=6.8e-08  Score=87.81  Aligned_cols=104  Identities=14%  Similarity=0.115  Sum_probs=73.3

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C--CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W--NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~--~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+++||||  ++-||.+++++|++     +|++|++++|+....    .  .....+.++.+|++|+++++++++   
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~-----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQE-----QGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHH-----CCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            4579999999  89999999999998     899999998753111    0  011246789999999987766543   


Q ss_pred             ----cCCCeeEEEEeccc-----C--CC---cHHHHHHhHHHHHHHHHHHHccc
Q 015961           94 ----QLTDVTHIFYVTWT-----N--RS---TEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~-----~--~~---~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                          .+|.++|.|+....     .  ..   .....+++|+.++..+.+++...
T Consensus        81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  134 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPL  134 (256)
T ss_pred             HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence                35667777764311     0  11   23446789999988887776543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.83  E-value=1.2e-07  Score=86.30  Aligned_cols=116  Identities=15%  Similarity=0.046  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      .+|.++||||+  +-||.+++++|++     .|++|+++.|+....        .....++.++.+|++|++++.++++ 
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHN-----AGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            45899999997  8999999999999     899999887753211        0012357788999999987766553 


Q ss_pred             ------cCCCeeEEEEeccc-----C-CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           94 ------QLTDVTHIFYVTWT-----N-RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~-----~-~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                            .+|.++|+|+....     . .+    .....+++|+.++..+.+++...-.+-.+++.+||
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS  148 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTY  148 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcc
Confidence                  35667777664321     0 11    23445688999988777776553111235666653

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.81  E-value=5.7e-08  Score=88.42  Aligned_cols=115  Identities=14%  Similarity=0.070  Sum_probs=78.1

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|.+|||||+  +-||.+++++|++     +|++|++.+|+....     . .....+.++.+|++|.+++.++++   
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~-----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRA-----LGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHH-----cCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHH
Confidence            35899999998  5999999999998     899999998864321     0 011234578999999987766543   


Q ss_pred             ----cCCCeeEEEEeccc-----C--C---CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961           94 ----QLTDVTHIFYVTWT-----N--R---STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~-----~--~---~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                          .+|.++|.|+....     .  .   ++.+..+++|+.++.++++++...-.+-.+++.+|
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~is  148 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMS  148 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEe
Confidence                35667887764221     0  0   13456789999999998887754311113455554

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.80  E-value=5.4e-08  Score=89.24  Aligned_cols=156  Identities=13%  Similarity=0.039  Sum_probs=96.4

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|.+|||||++  -||..++++|++     .|++|++..|+....     . ........+.+|++|.+++.++++   
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAA-----QGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHh-----CCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHH
Confidence            457899999997  899999999999     899999988863210     0 011123468999999987766553   


Q ss_pred             ----cCCCeeEEEEeccc-----C---C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCC
Q 015961           94 ----QLTDVTHIFYVTWT-----N---R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~-----~---~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                          .+|.++|.|+....     .   .  ++.+..+++|+.++.++++++...-.+-.+++.+||..         +. 
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~---------~~-  150 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG---------ST-  150 (271)
T ss_pred             HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC---------cc-
Confidence                35667777764321     0   0  13455678999999888877654311113455554311         10 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                          .+    .   |. ...|+.        .+.++..+ ...|+++..+.|+.|-.
T Consensus       151 ----~~----~---~~-~~~Y~asKaAl~~l~r~la~el-~~~gIrVn~v~PG~i~T  194 (271)
T PRK06505        151 ----RV----M---PN-YNVMGVAKAALEASVRYLAADY-GPQGIRVNAISAGPVRT  194 (271)
T ss_pred             ----cc----C---Cc-cchhhhhHHHHHHHHHHHHHHH-hhcCeEEEEEecCCccc
Confidence                00    0   10 011432        33333333 45689999999998865

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.80  E-value=7.5e-08  Score=87.61  Aligned_cols=116  Identities=14%  Similarity=0.108  Sum_probs=78.0

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++|.+|||||+  +-||..++++|.+     .|++|++..|+....        .. ....+.++.+|++|++++.++++
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHA-----AGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHH-----CCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHH
Confidence            46899999986  7999999999998     899998876643210        00 11235688999999988766553


Q ss_pred             -------cCCCeeEEEEeccc-----CC-----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           94 -------QLTDVTHIFYVTWT-----NR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~-----~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                             .+|.++|.|+....     ..     +..+..+++|+.++..+.+++...-.+-.+++++||
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS  148 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTY  148 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEec
Confidence                   35667787764321     11     133567789999998888876543111245666653

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.78  E-value=1.1e-07  Score=87.32  Aligned_cols=115  Identities=16%  Similarity=0.059  Sum_probs=77.7

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCceEEEccCCCHHHHHHHHcc--
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      .+|++|||||+  +-||..++++|++     +|++|++..|+..  ..   .. .......+++|++|+++++++++.  
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~-----~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRA-----AGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHH
Confidence            45899999997  8999999999999     8999988877521  10   00 112345789999999887665543  


Q ss_pred             -----CCCeeEEEEeccc-----C-----CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961           95 -----LTDVTHIFYVTWT-----N-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus        95 -----~~~V~h~a~~~~~-----~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                           +|.++|.|+....     .     .+.....+++|+.++..+++++...-.+-.+++.+|
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~is  148 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLT  148 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence                 5667777664321     0     013456779999999999887765421124555555

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.76  E-value=1.4e-07  Score=86.09  Aligned_cols=115  Identities=11%  Similarity=0.059  Sum_probs=75.6

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-C----C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           25 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKP-N----W-NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        25 ~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~----~-~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      .+|++|||||++  -||.++++.|++     +|++|++..|+... .    . ...+.+..+.+|++|+++++.+++.  
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~-----~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELG   79 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHH-----CCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHH
Confidence            357899999985  899999999999     89999988876310 0    1 0113456789999999887766532  


Q ss_pred             -----CCCeeEEEEecccCC-----------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961           95 -----LTDVTHIFYVTWTNR-----------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus        95 -----~~~V~h~a~~~~~~~-----------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                           +|.++|.|+......           +..+..+++|+.+...+.+++...-..-.+++.+|
T Consensus        80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~is  145 (262)
T PRK07984         80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS  145 (262)
T ss_pred             hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEe
Confidence                 566777776422100           12345678899988777776643211113455555

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.75  E-value=1.3e-07  Score=86.31  Aligned_cols=115  Identities=13%  Similarity=0.062  Sum_probs=74.7

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|++|||||  ++-||.+++++|++     +|++|++..|.....     . ........+++|++|+++++.++.   
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACRE-----QGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence            4579999997  67999999999998     899998877642110     1 011234578999999988766553   


Q ss_pred             ----cCCCeeEEEEecccC-------CC----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEec
Q 015961           94 ----QLTDVTHIFYVTWTN-------RS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQT  144 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~-------~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s  144 (397)
                          .+|.++|.|+.....       .+    ..+..+++|+.++..+.+++... ..+-.+++.+|
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~is  146 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALS  146 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEc
Confidence                366688887653210       11    22345678998887777765442 11113566555

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.75  E-value=1.5e-07  Score=85.70  Aligned_cols=115  Identities=14%  Similarity=0.084  Sum_probs=76.2

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|++|||||  ++-||.+++++|++     .|++|++..|...  ..   .. .......+.+|++|++++..+++   
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKR-----EGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHH-----CCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHH
Confidence            4589999996  67999999999998     8999988765421  00   00 11223468999999988766653   


Q ss_pred             ----cCCCeeEEEEecccC---------CC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961           94 ----QLTDVTHIFYVTWTN---------RS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~---------~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                          .+|.++|.|+.....         .+  +.+..+++|+.++..+.+++...-.+-.+++.+|
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~is  145 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS  145 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Confidence                356677777643210         01  3345678999999888887765421124566655

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.73  E-value=3.4e-07  Score=85.35  Aligned_cols=116  Identities=19%  Similarity=0.054  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC---------C-------CC-CCCCceEEEccCCCHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---------N-------WN-ADHLVEYVQCDVSDPEE   87 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~---------~-------~~-~~~~v~~~~~Dl~d~~~   87 (397)
                      .+|.+|||||++.||.+++++|++     .|++|++++|+...         .       .. ....+.++++|++|+++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGA-----AGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            358999999999999999999998     89999999986321         0       00 01245678999999987


Q ss_pred             HHHHHc-------cCCCeeEEE-Eecc-----cCC-----CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961           88 TQAKLS-------QLTDVTHIF-YVTW-----TNR-----STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  145 (397)
Q Consensus        88 l~~~~~-------~~~~V~h~a-~~~~-----~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  145 (397)
                      ++.+++       .+|.++|.| +...     ...     +.....+++|+.++..+.+++...-  ..-.+|+.+||
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS  159 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITD  159 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECC
Confidence            766553       356677766 3210     000     1234567889998877777665431  11245666653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.73  E-value=1.1e-07  Score=87.27  Aligned_cols=114  Identities=15%  Similarity=0.031  Sum_probs=76.7

Q ss_pred             CCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--C---C-CC-CCCceEEEccCCCHHHHHHHHc---
Q 015961           26 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N---W-NA-DHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        26 ~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~---~-~~-~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      +|.+|||||+  +-||..+++.|++     .|++|++..|+...  .   . .. ... ..+.+|++|.+++.++++   
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~-----~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFE-----QGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            5899999997  7999999999999     89999998886310  0   0 00 112 578999999987766553   


Q ss_pred             ----cCCCeeEEEEeccc-----C-C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           94 ----QLTDVTHIFYVTWT-----N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~-----~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                          .+|.++|.|+....     . .    +..+..+++|+.++..+.+++...-..-.+++.+||
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS  144 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSY  144 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEec
Confidence                35667777664211     0 1    134567899999998888776653111135665553

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.72  E-value=1e-07  Score=86.57  Aligned_cols=117  Identities=15%  Similarity=0.004  Sum_probs=76.1

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHccC---
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLSQL---   95 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~~~---   95 (397)
                      .+|||||+|.||.+++++|.+.... .|++|+++.|+....      .   .....+.++.+|++|.+++.++++.+   
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKS-PGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhcc-CCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            5899999999999999999841000 488999999975321      0   01235778999999998876655432   


Q ss_pred             --------CCeeEEEEecccC----C-----CcHHHHHHhHHHHHHHHHHHHcccC----CCcceEEEecC
Q 015961           96 --------TDVTHIFYVTWTN----R-----STEAENCKINGSMFRNVLRAVIPNA----PNLRHVCLQTG  145 (397)
Q Consensus        96 --------~~V~h~a~~~~~~----~-----~~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~~~~~s~  145 (397)
                              +.++|.|+.....    .     +.....+++|+.++..+.+++...-    ..-.+++++||
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS  151 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISS  151 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECC
Confidence                    2477776542110    1     1235678999999877776664431    11246776664

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.69  E-value=3.8e-07  Score=81.31  Aligned_cols=101  Identities=8%  Similarity=-0.055  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|+++||||++-||..++++|.+     +|++|+++.|+....      . ....++..+.+|+.|++++.++++    
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~-----~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFAR-----LGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999875421      0 012346678899999987765542    


Q ss_pred             ----cCCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHH
Q 015961           94 ----QLTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAV  130 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~  130 (397)
                          .+|.++|.++.....   .+    .....+++|+.++-.++.++
T Consensus        79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVA  126 (227)
T ss_pred             HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence                456677776421111   11    22335567777766655544

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.68  E-value=1.3e-07  Score=88.46  Aligned_cols=115  Identities=15%  Similarity=0.126  Sum_probs=78.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCCCCCCCCce------EEEccCCCHHHHHHHHccCCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVE------YVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~------~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      .+|+||||+|++|++++..|+..+...  ++.+|+++++.+..........+      ....|+....++.+.++++|.|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV   82 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA   82 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence            479999999999999999998732221  24589999986532111100111      1123444455677889999999


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEE
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVC  141 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~  141 (397)
                      +|+|+.......+..+.++.|+.-.+.+.+.+.++. +....++
T Consensus        83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiiv  126 (325)
T cd01336          83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLV  126 (325)
T ss_pred             EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            999886544444678899999999999999888874 3444333

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.68  E-value=3.2e-07  Score=83.53  Aligned_cols=116  Identities=9%  Similarity=0.002  Sum_probs=75.6

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|.+|||||++  -||.+++++|.+     +|++|++..|+....     .. ......++++|++|+++++++++   
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~-----~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKK-----HGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHH-----cCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHH
Confidence            457899999997  799999999998     899999888763110     10 11122357899999988766553   


Q ss_pred             ----cCCCeeEEEEeccc-----C-CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           94 ----QLTDVTHIFYVTWT-----N-RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~-----~-~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                          .+|.++|.++....     . .+    +....+++|+.++..+++++...-.+-.+++.+||
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS  147 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTY  147 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEec
Confidence                35666776553211     0 11    34567889999998888876543111135665553

>PRK05599 hypothetical protein; Provisional

Probab=98.68  E-value=4.5e-07  Score=81.87  Aligned_cols=113  Identities=15%  Similarity=0.151  Sum_probs=70.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHc-----
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      |++|||||++-||..++++|.+      |++|++++|+....      ..  ....+.++.+|++|.+++++++.     
T Consensus         1 ~~vlItGas~GIG~aia~~l~~------g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   74 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCH------GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL   74 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhC------CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh
Confidence            4799999999999999999974      78999999975321      10  11247789999999987766543     


Q ss_pred             --cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961           94 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  145 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  145 (397)
                        .+|.++|.|+......  +    ...+..++|+.+..+++.++...   ...-.+++.+||
T Consensus        75 ~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS  137 (246)
T PRK05599         75 AGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSS  137 (246)
T ss_pred             cCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence              3555667665322111  1    12344567887776555444221   111245666664

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.64  E-value=2.3e-07  Score=86.16  Aligned_cols=120  Identities=15%  Similarity=0.054  Sum_probs=83.8

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-C--CCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-N--ADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      |+...++||+|+||+|.||+.++..|....   ...+++++++...... .  .+........+.+|+.++.+.++++|.
T Consensus         3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~---~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDv   79 (321)
T PTZ00325          3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNP---HVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADL   79 (321)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHhcCC---CCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCE
Confidence            344445799999999999999999998521   2458999998322110 0  011112334566665555678999999


Q ss_pred             eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                      |+++++.......+..+.+..|+..++++++++++++  +.++++++|
T Consensus        80 VVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~--~~~iviv~S  125 (321)
T PTZ00325         80 VLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA--PKAIVGIVS  125 (321)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEec
Confidence            9999875433334678889999999999999999875  566766654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.62  E-value=1.6e-07  Score=79.26  Aligned_cols=112  Identities=18%  Similarity=0.213  Sum_probs=79.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCC--CCCC------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARR--PKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~--~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      |++|||||+|-||..++++|++     + +..|+++.|+  ....      . ....++.++++|+++.++++..++.  
T Consensus         1 k~~lItGa~~giG~~~a~~l~~-----~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALAR-----RGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI   75 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHH-----TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----cCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc
Confidence            5799999999999999999998     5 5678888887  1110      0 0125788999999999877766654  


Q ss_pred             -----CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           95 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        95 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                           +|.++|+++......      +.....+++|+.+...+.+++..  ..-.+++++||
T Consensus        76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS  135 (167)
T PF00106_consen   76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISS  135 (167)
T ss_dssp             HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEE
T ss_pred             cccccccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecc
Confidence                 445666655432111      13356789999999999998877  23566776664

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.61  E-value=7.4e-07  Score=82.54  Aligned_cols=119  Identities=16%  Similarity=0.018  Sum_probs=82.0

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      .+..++.++|||||.-||..++++|.+     +|.+|+...|+....         ......+.++++|++|.+++....
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~-----~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa  105 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELAL-----RGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFA  105 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHH
Confidence            344568999999999999999999999     899999999986321         112356778999999998876655


Q ss_pred             cc-------CCCeeEEEEecccCC----CcHHHHHHhHHHHHHHHHHHH----cccCCCcceEEEecCCc
Q 015961           93 SQ-------LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAV----IPNAPNLRHVCLQTGTK  147 (397)
Q Consensus        93 ~~-------~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~~~~~~s~~~  147 (397)
                      +.       .|..++-|+....+.    +..+..+.+|..|...|.+.+    +...  ..+||.+||..
T Consensus       106 ~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~--~~RIV~vsS~~  173 (314)
T KOG1208|consen  106 EEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA--PSRIVNVSSIL  173 (314)
T ss_pred             HHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC--CCCEEEEcCcc
Confidence            43       233344444333222    235667899999976665544    4332  27888887644

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=98.61  E-value=1.2e-06  Score=73.03  Aligned_cols=166  Identities=15%  Similarity=0.137  Sum_probs=102.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      ..|.+..+||||+.-||++++..|.+     .|++|.+.+++...+      +....+-..+.||+.+.++++..++.  
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~-----~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~   85 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAK-----KGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEME   85 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHh-----cCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHH
Confidence            34567899999999999999999999     899999888875432      21222344789999999876654433  


Q ss_pred             -----CCCeeEEEEecc------cCCCcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccccccccccCCC
Q 015961           95 -----LTDVTHIFYVTW------TNRSTEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        95 -----~~~V~h~a~~~~------~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           .+.+++||+.+-      ..+++.++.+.+|+.|+-.+.+++.+.    ..+...++-+||+..-.+   .+|. 
T Consensus        86 k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiG---N~GQ-  161 (256)
T KOG1200|consen   86 KSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIG---NFGQ-  161 (256)
T ss_pred             HhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccc---cccc-
Confidence                 344777776532      123367888999999988777766554    223335665554221111   1221 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                          ..+..+    ....  -+..+.+++.. ...++++-++-|+.|--
T Consensus       162 ----tnYAAs----K~Gv--IgftktaArEl-a~knIrvN~VlPGFI~t  199 (256)
T KOG1200|consen  162 ----TNYAAS----KGGV--IGFTKTAAREL-ARKNIRVNVVLPGFIAT  199 (256)
T ss_pred             ----hhhhhh----cCce--eeeeHHHHHHH-hhcCceEeEeccccccC
Confidence                000000    0000  11244454444 45679999999988876

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.60  E-value=7.9e-08  Score=81.75  Aligned_cols=89  Identities=16%  Similarity=0.081  Sum_probs=64.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccC----C
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQL----T   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~   96 (397)
                      ++++|||||||+|. +++.|.+     .|++|++++|++...      ......+.++.+|++|.+++..+++++    .
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~-----~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g   74 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCE-----KGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNG   74 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHH-----CcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47999999999886 9999998     899999999875321      111246778899999999887777643    2


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  134 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  134 (397)
                      .+..++.             .+++.+++++..+|++.+
T Consensus        75 ~id~lv~-------------~vh~~~~~~~~~~~~~~g   99 (177)
T PRK08309         75 PFDLAVA-------------WIHSSAKDALSVVCRELD   99 (177)
T ss_pred             CCeEEEE-------------eccccchhhHHHHHHHHc
Confidence            2323221             234457778999999875

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.59  E-value=3e-07  Score=78.89  Aligned_cols=112  Identities=30%  Similarity=0.293  Sum_probs=75.7

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC-CCCC---------CCCCCceEEEccCCCHHHHHHHHccC--
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPNW---------NADHLVEYVQCDVSDPEETQAKLSQL--   95 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~~~--   95 (397)
                      ++|||||+|-||..+++.|.+.    ...+|+++.|++ ....         .....+.++.+|++|++++.+++..+  
T Consensus         2 tylitGG~gglg~~la~~La~~----~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAER----GARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT----T-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHc----CCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHh
Confidence            6899999999999999999983    234699999983 2210         01246789999999999999988664  


Q ss_pred             -----CCeeEEEEeccc---CCC---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           96 -----TDVTHIFYVTWT---NRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        96 -----~~V~h~a~~~~~---~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                           +.|+|+++....   ...   .....+.+-+.|+.+|.++....  .+.+++..||
T Consensus        78 ~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SS  136 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSS  136 (181)
T ss_dssp             TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEE
T ss_pred             ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECC
Confidence                 239999875321   111   23455788999999999998763  4788887764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN00015 protochlorophyllide reductase

Probab=98.58  E-value=2.1e-07  Score=87.04  Aligned_cols=115  Identities=11%  Similarity=0.060  Sum_probs=78.5

Q ss_pred             EEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           30 LIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        30 LVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      |||||++.||.+++++|++     +| ++|++..|+....      . .....+.++.+|++|.+++.+++.       .
T Consensus         1 lITGas~GIG~aia~~l~~-----~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~   75 (308)
T PLN00015          1 IITGASSGLGLATAKALAE-----TGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP   75 (308)
T ss_pred             CEeCCCChHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            6999999999999999998     78 9999999865321      1 012357788999999988766553       3


Q ss_pred             CCCeeEEEEecccC--C-----CcHHHHHHhHHHHHHHHHHHHccc--CCC--cceEEEecCCccc
Q 015961           95 LTDVTHIFYVTWTN--R-----STEAENCKINGSMFRNVLRAVIPN--APN--LRHVCLQTGTKHY  149 (397)
Q Consensus        95 ~~~V~h~a~~~~~~--~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~--~~~~~~~s~~~~y  149 (397)
                      +|.++|.|+.....  .     +..+..+++|+.|+..+.+++...  ..+  ..+++.+||...+
T Consensus        76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence            56678877642211  1     134567899999987776655432  111  2467777765443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.53  E-value=4.5e-07  Score=76.62  Aligned_cols=102  Identities=23%  Similarity=0.252  Sum_probs=71.2

Q ss_pred             CCEEEEEcC-CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--CCCCCCCceEEEccCCCHHHHHHHHccC----CC-
Q 015961           26 QSVALIVGV-TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVSDPEETQAKLSQL----TD-   97 (397)
Q Consensus        26 ~~~ILVtGa-tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~-   97 (397)
                      .++|||||+ .|-||.+|+++|.+     +|+.|++..|+-..  ++....++...+.|+++++++.+....+    +. 
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~-----~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFAR-----NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHh-----CCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            368898875 59999999999999     89999999997543  2222357889999999999876655432    22 


Q ss_pred             ---eeEEEEec--ccCCC----cHHHHHHhHHHHHHHHHHHHcc
Q 015961           98 ---VTHIFYVT--WTNRS----TEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        98 ---V~h~a~~~--~~~~~----~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                         .++-|+..  +...+    .-+..+++|+-|..++.++...
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h  125 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSH  125 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHH
Confidence               33333221  11111    3356789999998888777753

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.53  E-value=1.4e-06  Score=74.54  Aligned_cols=115  Identities=14%  Similarity=0.115  Sum_probs=76.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--------CCCCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--------NWNADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--------~~~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      .+|++++||+.|-||..+.++|++     +|..+.++..+.+.        +..+...+-|+++|+++..+++++++.  
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~-----kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLE-----KGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHH-----cCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence            478999999999999999999999     78887777655332        122345788999999999888777654  


Q ss_pred             --CCCeeEEEEecccCCC-cHHHHHHhHHHHH----HHHHHHHccc-CCCcceEEEec
Q 015961           95 --LTDVTHIFYVTWTNRS-TEAENCKINGSMF----RNVLRAVIPN-APNLRHVCLQT  144 (397)
Q Consensus        95 --~~~V~h~a~~~~~~~~-~~~~~~~~nv~gt----~~ll~a~~~~-~~~~~~~~~~s  144 (397)
                        ...|+.+.-.+....+ +.+..+.+|+.|.    ...+.+..+. +..-.-++-+|
T Consensus        79 ~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNms  136 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMS  136 (261)
T ss_pred             HHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEec
Confidence              2334444333444333 6777888887764    4455655543 22333444444

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.53  E-value=1.7e-06  Score=77.85  Aligned_cols=162  Identities=16%  Similarity=0.126  Sum_probs=101.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccC--
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQL--   95 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~--   95 (397)
                      +..+|-|||||+-.-.|..|+++|.+     +|+.|.+-.-.+..+     ....++...++.|++++++++++.+-+  
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~-----~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDK-----KGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHh-----cCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHH
Confidence            34457799999999999999999999     899998887543321     112467888999999999988776431  


Q ss_pred             ----C---CeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCC
Q 015961           96 ----T---DVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        96 ----~---~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                          +   .++|.|+......       ++.....++|+.|+..+..+.... .+.-.+++.+||         +-|.. 
T Consensus       101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS---------~~GR~-  170 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSS---------VLGRV-  170 (322)
T ss_pred             hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecc---------cccCc-
Confidence                1   2778776432221       145667799999976665554332 111234555543         33321 


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH---HHHHHhcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI---LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~---l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                        ..|.     ..|...+.|+.|.+   ++..+ ...|++++++-|| ++-
T Consensus       171 --~~p~-----~g~Y~~SK~aVeaf~D~lR~EL-~~fGV~VsiiePG-~f~  212 (322)
T KOG1610|consen  171 --ALPA-----LGPYCVSKFAVEAFSDSLRREL-RPFGVKVSIIEPG-FFK  212 (322)
T ss_pred             --cCcc-----cccchhhHHHHHHHHHHHHHHH-HhcCcEEEEeccC-ccc
Confidence              1110     11223334554433   33333 5789999999999 444

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.50  E-value=1.9e-06  Score=72.66  Aligned_cols=163  Identities=13%  Similarity=0.078  Sum_probs=102.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      ++.+||||||+.-||..|+++|++     -|-+|++..|+...-   ....+.+.-..||+.|.+..++.++       .
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~e-----lgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLE-----LGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHH-----hCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCc
Confidence            467999999999999999999998     788999999985321   1123678889999999875544332       2


Q ss_pred             CCCeeEEEEeccc----CCC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           95 LTDVTHIFYVTWT----NRS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        95 ~~~V~h~a~~~~~----~~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      .+.+++.|+.-..    ..+    +..+.+++|+.++..|..+...+  ...---++-+||         -.+..     
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSS---------GLafv-----  144 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSS---------GLAFV-----  144 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecc---------ccccC-----
Confidence            4457777765221    111    23456789999998887777654  111223444442         12211     


Q ss_pred             CCCCCCCCCCCCC-cchhHHHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPN-FYYTLEDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~-~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      | .+..|.+...- .-...+..|++.. +..++.+.-+=|+.|--
T Consensus       145 P-m~~~PvYcaTKAaiHsyt~aLR~Ql-k~t~veVIE~~PP~V~t  187 (245)
T COG3967         145 P-MASTPVYCATKAAIHSYTLALREQL-KDTSVEVIELAPPLVDT  187 (245)
T ss_pred             c-ccccccchhhHHHHHHHHHHHHHHh-hhcceEEEEecCCceec
Confidence            1 12222221110 0011366777776 77789999999988876

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.48  E-value=5e-07  Score=81.29  Aligned_cols=97  Identities=20%  Similarity=0.222  Sum_probs=71.3

Q ss_pred             HHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc----CCCeeEEEEecccCCCcHHHHHH
Q 015961           42 LAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ----LTDVTHIFYVTWTNRSTEAENCK  117 (397)
Q Consensus        42 lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~----~~~V~h~a~~~~~~~~~~~~~~~  117 (397)
                      ++++|++     +|++|++++|+....    ...+++++|++|.+++.++++.    +|.++|.|+..  ...+.+..++
T Consensus         1 ~a~~l~~-----~G~~Vv~~~r~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~--~~~~~~~~~~   69 (241)
T PRK12428          1 TARLLRF-----LGARVIGVDRREPGM----TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVP--GTAPVELVAR   69 (241)
T ss_pred             ChHHHHh-----CCCEEEEEeCCcchh----hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCC--CCCCHHHhhh
Confidence            4677887     899999999976442    2246789999999998887764    67788887642  2345678899


Q ss_pred             hHHHHHHHHHHHHcccCCCcceEEEecCCccc
Q 015961          118 INGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY  149 (397)
Q Consensus       118 ~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y  149 (397)
                      +|+.++..+++++...-.+-.+++++||...|
T Consensus        70 vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~  101 (241)
T PRK12428         70 VNFLGLRHLTEALLPRMAPGGAIVNVASLAGA  101 (241)
T ss_pred             hchHHHHHHHHHHHHhccCCcEEEEeCcHHhh
Confidence            99999999999887541122578888776555

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.44  E-value=1.9e-06  Score=77.22  Aligned_cols=120  Identities=16%  Similarity=0.081  Sum_probs=79.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC------CCCCceEEEccCCCHHHHHHHHc---
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      +-.++.||||||.+-+|+.++.++++     +|.++.+.+..+.....      ....+....||++|.+++....+   
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~-----rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAK-----RGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHH-----hCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHH
Confidence            33578999999999999999999999     78888888887643211      11257789999999987655443   


Q ss_pred             ----cCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCc
Q 015961           94 ----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTK  147 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~  147 (397)
                          .++.+++-|+......    +  .-+..+++|+.|.-...++....  ..+=.|++.++|..
T Consensus       110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~a  175 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVA  175 (300)
T ss_pred             HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhh
Confidence                2444666666533211    1  23556789999865544443322  12346778776543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.43  E-value=3.9e-06  Score=75.53  Aligned_cols=159  Identities=19%  Similarity=0.105  Sum_probs=102.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC---CCCCceEEEccCCCHHHHHHHHccC--
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLSQL--   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~l~~~~~~~--   95 (397)
                      ++|+|||++--+|..++.++..     +|++|+++.|+..+.      +.   ....+.+..+|+.|.+++...+++.  
T Consensus        34 ~hi~itggS~glgl~la~e~~~-----~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKR-----EGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHH-----ccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            6899999999999999999998     899999999985431      11   1123668899999998877776654  


Q ss_pred             -----CCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccCCC---cceEEEecCCccccccccccCCCCC
Q 015961           96 -----TDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNAPN---LRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        96 -----~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~~~---~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                           |.++|+|+.+....  +    .-+...++|..|+-|++.++....+.   ..+++.+||.....   ..||..  
T Consensus       109 ~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~---~i~Gys--  183 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML---GIYGYS--  183 (331)
T ss_pred             ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc---Cccccc--
Confidence                 34777776543221  1    23456789999999999877665222   33777776422111   123321  


Q ss_pred             CCCCCCCCCCCCCCCCcchhH---HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL---EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~---e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                  ..+...++.   ...++... ...++.++..-|+.+--
T Consensus       184 ------------aYs~sK~alrgLa~~l~qE~-i~~~v~Vt~~~P~~~~t  220 (331)
T KOG1210|consen  184 ------------AYSPSKFALRGLAEALRQEL-IKYGVHVTLYYPPDTLT  220 (331)
T ss_pred             ------------ccccHHHHHHHHHHHHHHHH-hhcceEEEEEcCCCCCC
Confidence                        111122331   33333333 45589999988887776

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.43  E-value=5.3e-06  Score=71.11  Aligned_cols=100  Identities=17%  Similarity=0.113  Sum_probs=67.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC-CCCC------C-CCCCCceEEEccCCCHHHHHHHHccC---
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR-PKPN------W-NADHLVEYVQCDVSDPEETQAKLSQL---   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~-~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~~---   95 (397)
                      +.|+||||+.-||--|+++|++.    +|.++++..++ ++.+      + ..++++++++.|+++.+++.+..+++   
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~----~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKD----KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcC----CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence            57999999999999999999986    57776666554 4431      1 13689999999999998877665442   


Q ss_pred             ------CCeeEEEEecccCC---C-c---HHHHHHhHHHHHHHHHHHH
Q 015961           96 ------TDVTHIFYVTWTNR---S-T---EAENCKINGSMFRNVLRAV  130 (397)
Q Consensus        96 ------~~V~h~a~~~~~~~---~-~---~~~~~~~nv~gt~~ll~a~  130 (397)
                            +..++.|+......   . +   ..+.+++|..|+..+.+++
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~  127 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF  127 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH
Confidence                  22444444322111   1 1   3456789998876655544

>PLN00106 malate dehydrogenase

Probab=98.42  E-value=1.6e-06  Score=80.64  Aligned_cols=107  Identities=14%  Similarity=0.072  Sum_probs=75.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~  103 (397)
                      +||+||||+|.||+.++..|....   ...+++++++.+...  . ..+........++.+.+++.+++.++|.|+|+|+
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~---~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG   95 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNP---LVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG   95 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence            689999999999999999998622   223799999865211  0 0011111223344444457788999999999987


Q ss_pred             ecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961          104 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus       104 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      ....+..+..+....|+..++++.+++++++++
T Consensus        96 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~  128 (323)
T PLN00106         96 VPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPN  128 (323)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            644433467889999999999999999988643

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.38  E-value=1e-05  Score=73.69  Aligned_cols=160  Identities=16%  Similarity=0.058  Sum_probs=101.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ...+|.+|||||+.-||..++++|.+     .|.+|++..|+....          .....++..+.+|+++.++.++++
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~-----~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~   79 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAK-----AGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLV   79 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHH
Confidence            44678999999999999999999999     899999999976431          111245788999999886543332


Q ss_pred             --------ccCCCeeEEEEecccCC---C----cHHHHHHhHHHH-HHHHHHHHccc--CCCcceEEEecCCcccccccc
Q 015961           93 --------SQLTDVTHIFYVTWTNR---S----TEAENCKINGSM-FRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFE  154 (397)
Q Consensus        93 --------~~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~g-t~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~  154 (397)
                              -.+|.+++.|+......   +    ..+..+++|+.| +.++..++..+  ..+--.++++|+...+..   
T Consensus        80 ~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~---  156 (270)
T KOG0725|consen   80 EFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP---  156 (270)
T ss_pred             HHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC---
Confidence                    33666677666433221   1    456678999995 66666666654  222345555553221110   


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeec
Q 015961          155 AFGKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       155 ~~g~~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                        +               .+.. .+|+.        .+-++... ..+|+++-.+-|+.|..+
T Consensus       157 --~---------------~~~~-~~Y~~sK~al~~ltr~lA~El-~~~gIRvN~v~PG~i~T~  200 (270)
T KOG0725|consen  157 --G---------------PGSG-VAYGVSKAALLQLTRSLAKEL-AKHGIRVNSVSPGLVKTS  200 (270)
T ss_pred             --C---------------CCCc-ccchhHHHHHHHHHHHHHHHH-hhcCcEEEEeecCcEeCC
Confidence              0               0001 22443        23333222 567899999999988874

>PRK09620 hypothetical protein; Provisional

Probab=98.31  E-value=9.8e-07  Score=78.11  Aligned_cols=74  Identities=14%  Similarity=0.024  Sum_probs=51.9

Q ss_pred             CCEEEEEcCC----------------ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHH
Q 015961           26 QSVALIVGVT----------------GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPE   86 (397)
Q Consensus        26 ~~~ILVtGat----------------GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~   86 (397)
                      +|+||||+|.                ||+|++|+++|++     +|++|+++++.....   ......+..+.+|....+
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~-----~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~   77 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELIS-----KGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQD   77 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHH-----CCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHH
Confidence            6899999886                9999999999999     899999998743211   111112334555333335


Q ss_pred             HHHHHHc--cCCCeeEEEEe
Q 015961           87 ETQAKLS--QLTDVTHIFYV  104 (397)
Q Consensus        87 ~l~~~~~--~~~~V~h~a~~  104 (397)
                      .+.+.+.  ++|.|+|+|+.
T Consensus        78 ~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         78 KMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             HHHHHhcccCCCEEEECccc
Confidence            6777774  57889999875

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.28  E-value=1.4e-05  Score=92.03  Aligned_cols=116  Identities=17%  Similarity=0.126  Sum_probs=83.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C------------------------------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W------------------------------   69 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~------------------------------   69 (397)
                      ..++.+|||||+|-||..++++|.+.    .|++|+++.|++...    |                              
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~----~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~ 2070 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQ----CQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVD 2070 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHh----cCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhh
Confidence            35689999999999999999999972    368999999972100    0                              


Q ss_pred             --------------------CCCCCceEEEccCCCHHHHHHHHcc------CCCeeEEEEecccC---C---CcHHHHHH
Q 015961           70 --------------------NADHLVEYVQCDVSDPEETQAKLSQ------LTDVTHIFYVTWTN---R---STEAENCK  117 (397)
Q Consensus        70 --------------------~~~~~v~~~~~Dl~d~~~l~~~~~~------~~~V~h~a~~~~~~---~---~~~~~~~~  117 (397)
                                          .....+.++.+|++|.+++.+++..      +|.|+|.|+.....   .   +.....++
T Consensus      2071 ~~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~ 2150 (2582)
T TIGR02813      2071 ALVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYG 2150 (2582)
T ss_pred             hcccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence                                0012467899999999887766643      57789987753221   1   14566789


Q ss_pred             hHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961          118 INGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus       118 ~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                      +|+.|+.++++++....  ..+|+.+||
T Consensus      2151 ~nv~G~~~Ll~al~~~~--~~~IV~~SS 2176 (2582)
T TIGR02813      2151 TKVDGLLSLLAALNAEN--IKLLALFSS 2176 (2582)
T ss_pred             HHHHHHHHHHHHHHHhC--CCeEEEEec
Confidence            99999999999987642  456776664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.27  E-value=2.1e-05  Score=72.98  Aligned_cols=117  Identities=14%  Similarity=0.020  Sum_probs=72.6

Q ss_pred             CCCCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC----------C-------CCC---CCCceEEEc
Q 015961           23 RSYQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----------N-------WNA---DHLVEYVQC   80 (397)
Q Consensus        23 ~~~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~----------~-------~~~---~~~v~~~~~   80 (397)
                      +.++|.+|||||  +.-||..+++.|.+     .|.+|++ .|....          .       ...   ......+.+
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~-----~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAA-----AGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPL   79 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHH-----CCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeec
Confidence            356789999999  79999999999999     8999887 443110          0       000   011356788


Q ss_pred             cC--CCHH------------------HHHHHH-------ccCCCeeEEEEecc---cC-C----CcHHHHHHhHHHHHHH
Q 015961           81 DV--SDPE------------------ETQAKL-------SQLTDVTHIFYVTW---TN-R----STEAENCKINGSMFRN  125 (397)
Q Consensus        81 Dl--~d~~------------------~l~~~~-------~~~~~V~h~a~~~~---~~-~----~~~~~~~~~nv~gt~~  125 (397)
                      |+  .+++                  ++++++       ..+|.++|.|+...   .+ .    ++....+++|+.++..
T Consensus        80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~  159 (303)
T PLN02730         80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS  159 (303)
T ss_pred             ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence            88  3222                  443333       23677888874211   11 1    1456678999999988


Q ss_pred             HHHHHcccCCCcceEEEecC
Q 015961          126 VLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus       126 ll~a~~~~~~~~~~~~~~s~  145 (397)
                      +++++...-..--+++++||
T Consensus       160 l~~~~~p~m~~~G~II~isS  179 (303)
T PLN02730        160 LLQHFGPIMNPGGASISLTY  179 (303)
T ss_pred             HHHHHHHHHhcCCEEEEEec
Confidence            88877654111145666653

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.21  E-value=4.7e-06  Score=74.02  Aligned_cols=68  Identities=16%  Similarity=0.148  Sum_probs=48.8

Q ss_pred             cCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCC--HHHHHHHHccCCCeeEEEEec
Q 015961           33 GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD--PEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        33 GatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      .+|||+|++|+++|++     +|++|+++.|..........+++++.++-.+  .+.+.+.+.++|.|+|+|+.+
T Consensus        23 ~SSG~iG~aLA~~L~~-----~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs   92 (229)
T PRK06732         23 HSTGQLGKIIAETFLA-----AGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS   92 (229)
T ss_pred             ccchHHHHHHHHHHHh-----CCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence            6799999999999998     8999999997643211112467776654332  245566677888999998754

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.21  E-value=2.8e-06  Score=80.09  Aligned_cols=86  Identities=22%  Similarity=0.144  Sum_probs=68.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ++|||.|| |+||+.++..|++     ++ .+|++.+|+..+.    ....++++.+++|+.|.+++.+++++.|.|+++
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~-----~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~   75 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQ-----NGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINA   75 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHh-----CCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence            68999997 9999999999998     45 7999999986432    112348999999999999999999999989998


Q ss_pred             EEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961          102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  134 (397)
Q Consensus       102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  134 (397)
                      +-..   .             ..+++++|.+.+
T Consensus        76 ~p~~---~-------------~~~i~ka~i~~g   92 (389)
T COG1748          76 APPF---V-------------DLTILKACIKTG   92 (389)
T ss_pred             CCch---h-------------hHHHHHHHHHhC
Confidence            5311   0             115788888865

>cd00704 MDH Malate dehydrogenase

Probab=98.20  E-value=1.1e-05  Score=75.40  Aligned_cols=109  Identities=17%  Similarity=0.192  Sum_probs=77.0

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCCCCCCCCceEEEccCCCH-----------HHHHHHHcc
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-----------EETQAKLSQ   94 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-----------~~l~~~~~~   94 (397)
                      ||.||||+|++|+.++..|...+-..  ..++++.+++....     +..+....|+.|.           ....+.+++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~   76 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----KALEGVVMELQDCAFPLLKGVVITTDPEEAFKD   76 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----CccceeeeehhhhcccccCCcEEecChHHHhCC
Confidence            79999999999999999988632221  12358888886521     1223334444443           245678999


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEE
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVC  141 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~  141 (397)
                      +|.|+|+|+....+..+..+.+..|+.-.+.+.+.+.+.+ +..+.++
T Consensus        77 aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv  124 (323)
T cd00704          77 VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLV  124 (323)
T ss_pred             CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9999999886544444788899999999999999999874 5554443

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06720 hypothetical protein; Provisional

Probab=98.18  E-value=6e-06  Score=69.79  Aligned_cols=76  Identities=17%  Similarity=0.076  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHH-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL-----   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~-----   92 (397)
                      .++.++||||+|.||..+++.|.+     .|++|++++|+....      . .....+.++.+|+++.+++.+.+     
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~-----~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAK-----QGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999998     799999999875321      0 01234567899999998776543     


Q ss_pred             --ccCCCeeEEEEec
Q 015961           93 --SQLTDVTHIFYVT  105 (397)
Q Consensus        93 --~~~~~V~h~a~~~  105 (397)
                        ..+|.++|.|+..
T Consensus        90 ~~G~iDilVnnAG~~  104 (169)
T PRK06720         90 AFSRIDMLFQNAGLY  104 (169)
T ss_pred             HcCCCCEEEECCCcC
Confidence              3467788887653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.18  E-value=1.8e-05  Score=71.52  Aligned_cols=116  Identities=19%  Similarity=0.135  Sum_probs=77.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C--CCC----CCceEEEccCCC-HHHHHHHH
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W--NAD----HLVEYVQCDVSD-PEETQAKL   92 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~--~~~----~~v~~~~~Dl~d-~~~l~~~~   92 (397)
                      .++++||||||++-||..+++.|.+     +|++|+++.|+....    .  ...    ..+.+..+|+++ .++++.++
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~   77 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAR-----EGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALV   77 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHH
Confidence            3458999999999999999999997     899988888865421    0  011    256678899998 76654443


Q ss_pred             c-------cCCCeeEEEEeccc--CC-----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           93 S-------QLTDVTHIFYVTWT--NR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        93 ~-------~~~~V~h~a~~~~~--~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                      .       .+|.+++.|+....  ..     +..+..+++|+.|...+.+++..... -++++.+||
T Consensus        78 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~Iv~isS  143 (251)
T COG1028          78 AAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-KQRIVNISS  143 (251)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-hCeEEEECC
Confidence            2       25656666554221  11     14466789999998888875554321 117776664

>PRK05086 malate dehydrogenase; Provisional

Probab=98.06  E-value=3.1e-05  Score=72.11  Aligned_cols=111  Identities=13%  Similarity=0.064  Sum_probs=73.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C-CCC-CCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-NAD-HLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      +||+|+||||.+|++++..|.....  .++++++++|.+...   . ..+ +....+.+  .+.+++.+.++++|.|+.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~--~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIit   76 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLP--AGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLIS   76 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCC--CccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEc
Confidence            5899999999999999988743100  356888888864321   0 011 11122333  1223445677889988888


Q ss_pred             EEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEe
Q 015961          102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQ  143 (397)
Q Consensus       102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~  143 (397)
                      ++.......++.+.+..|...++++++++++++  +..++.+
T Consensus        77 aG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~--~~~iviv  116 (312)
T PRK05086         77 AGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC--PKACIGI  116 (312)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEE
Confidence            665433333678889999999999999999875  4445444

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.04  E-value=0.00014  Score=67.36  Aligned_cols=36  Identities=17%  Similarity=0.093  Sum_probs=31.1

Q ss_pred             CCCCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           23 RSYQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        23 ~~~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      ..++|.+|||||+  .-||.++++.|.+     +|++|++.+|
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~-----~Ga~Vvv~~~   42 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAE-----AGATILVGTW   42 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHH-----CCCEEEEEec
Confidence            3457899999995  8999999999999     8999988664

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.02  E-value=3e-05  Score=72.45  Aligned_cols=108  Identities=14%  Similarity=0.153  Sum_probs=74.3

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH-----------HHHHHHcc
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE-----------ETQAKLSQ   94 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~-----------~l~~~~~~   94 (397)
                      +|.|+||+|.+|+.++..|.......  +.++++.+++.+...     ..+....|+.|..           ...+.+++
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~   75 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----VLEGVVMELMDCAFPLLDGVVPTHDPAVAFTD   75 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----ccceeEeehhcccchhcCceeccCChHHHhCC
Confidence            58999999999999999998632211  122588888864321     1223344444443           34578899


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-CCcceE
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHV  140 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~  140 (397)
                      +|.|+|+|+.......+..+....|+.-.+.+.+.+.++. +..+.+
T Consensus        76 aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iii  122 (324)
T TIGR01758        76 VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVL  122 (324)
T ss_pred             CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence            9999999875433333578889999999999999998873 444333

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.97  E-value=3.9e-05  Score=69.06  Aligned_cols=90  Identities=13%  Similarity=0.045  Sum_probs=64.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~  103 (397)
                      ++|||+||||. |+.|++.|.+     .|++|++.++..... .....+...+..+..|.+++.+.++.  ++.|++..|
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~-----~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH   74 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIA-----QGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATH   74 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHh-----CCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence            47999999999 9999999998     799999999976432 22222334556777888888888876  455777643


Q ss_pred             ecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961          104 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus       104 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                      .           +  -..-++|+.++|++.+.
T Consensus        75 P-----------f--A~~is~~a~~a~~~~~i   93 (256)
T TIGR00715        75 P-----------F--AAQITTNATAVCKELGI   93 (256)
T ss_pred             H-----------H--HHHHHHHHHHHHHHhCC
Confidence            2           1  12456678899998763

This enzyme was found to be a monomer by gel filtration.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.87  E-value=3.4e-05  Score=72.06  Aligned_cols=160  Identities=13%  Similarity=0.043  Sum_probs=93.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-------EEEEEeCCCCC--C------CCC-----CCCceEEEccCCCH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARRPKP--N------WNA-----DHLVEYVQCDVSDP   85 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-------~V~~l~R~~~~--~------~~~-----~~~v~~~~~Dl~d~   85 (397)
                      ++||.|+||+|++|+.++..|+.     ++.       +++.++.....  .      +..     ..++++.       
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~-----~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------   69 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIAS-----GEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------   69 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHh-----ccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------
Confidence            36899999999999999999986     333       68888874322  1      000     0111111       


Q ss_pred             HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEecCCccccccccccCCCCCCCC
Q 015961           86 EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        86 ~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      ....+.++++|.|+.+|+....+..+..+.+..|+.-.+.+.+.+.++++ ..+. +.+|-      +..+..      .
T Consensus        70 ~~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~ii-ivvsN------PvD~~t------~  136 (322)
T cd01338          70 DDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKV-LVVGN------PCNTNA------L  136 (322)
T ss_pred             cCcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEE-EEecC------cHHHHH------H
Confidence            11246689999888887654333347788899999999999999998763 4443 32331      000000      0


Q ss_pred             CCCCCCC-CCCCCCcchhH--HHHHHHHHhcCCCeeEEEEcCCceeecc
Q 015961          165 PFTEDMP-RLDAPNFYYTL--EDILFEEVEKKEELSWSVHRPDTIFGFS  210 (397)
Q Consensus       165 ~~~E~~p-~~~~~~~~y~~--e~~l~~~~~~~~g~~~~ilRp~~v~G~~  210 (397)
                      -..+..+ ..+...+..+.  +..++...++..+++...+|...|||..
T Consensus       137 ~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         137 IAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             HHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence            0001111 11111211111  2333333347788999999988999943

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.77  E-value=6.8e-05  Score=67.35  Aligned_cols=148  Identities=16%  Similarity=0.142  Sum_probs=93.1

Q ss_pred             cCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHH--------ccCC
Q 015961           33 GVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKL--------SQLT   96 (397)
Q Consensus        33 Gat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~--------~~~~   96 (397)
                      |++  +-||..++++|++     .|++|++++|+....      .....+.+++.+|++|+++++.++        ..+|
T Consensus         1 g~~~s~GiG~aia~~l~~-----~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAE-----EGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHH-----TTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred             CCCCCCChHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence            666  9999999999999     899999999986531      001123457999999998776653        4467


Q ss_pred             CeeEEEEeccc---CCC-------cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           97 DVTHIFYVTWT---NRS-------TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        97 ~V~h~a~~~~~---~~~-------~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      .++|.++....   ..+       .....+++|+.++..+++++.+.-.+-..++++|+..         +     ..+ 
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~---------~-----~~~-  140 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA---------A-----QRP-  140 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG---------G-----TSB-
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh---------h-----ccc-
Confidence            78888775432   111       3455678999999888887755411123455554211         1     000 


Q ss_pred             CCCCCCCCCCCcchhH--------HHHHHHHHhcC-CCeeEEEEcCCceee
Q 015961          167 TEDMPRLDAPNFYYTL--------EDILFEEVEKK-EELSWSVHRPDTIFG  208 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~--------e~~l~~~~~~~-~g~~~~ilRp~~v~G  208 (397)
                            .+. ...|+.        .+.++..+ .. .|+++-.+.|+.|..
T Consensus       141 ------~~~-~~~y~~sKaal~~l~r~lA~el-~~~~gIrVN~V~pG~i~t  183 (241)
T PF13561_consen  141 ------MPG-YSAYSASKAALEGLTRSLAKEL-APKKGIRVNAVSPGPIET  183 (241)
T ss_dssp             ------STT-THHHHHHHHHHHHHHHHHHHHH-GGHGTEEEEEEEESSBSS
T ss_pred             ------Ccc-chhhHHHHHHHHHHHHHHHHHh-ccccCeeeeeecccceec
Confidence                  011 112542        33333333 45 789999999998876

...

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.71  E-value=5.4e-05  Score=65.65  Aligned_cols=72  Identities=22%  Similarity=0.136  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      .+++++|+||+|.+|+.+++.|.+     .|++|++++|+....      .....+.+...+|..+.+++.+.+.++|.|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~-----~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAR-----EGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence            457999999999999999999998     788999999975321      101124556678888998888999999876


Q ss_pred             eEE
Q 015961           99 THI  101 (397)
Q Consensus        99 ~h~  101 (397)
                      ++.
T Consensus       102 i~a  104 (194)
T cd01078         102 FAA  104 (194)
T ss_pred             EEC
Confidence            664

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.70  E-value=6.4e-05  Score=61.73  Aligned_cols=102  Identities=17%  Similarity=0.074  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCC-CceEEEccCCCHHHHHHHHccCCC---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADH-LVEYVQCDVSDPEETQAKLSQLTD---   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~---   97 (397)
                      -++.|++||+.--||+.++..|.+     .|.+|+++.|.+..-.   ...+ -|..+.+|+.+-+.+.+.+..+-+   
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~-----aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAK-----AGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHh-----cCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence            357899999999999999999999     8999999999864320   1223 488999999998888887776544   


Q ss_pred             eeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHc
Q 015961           98 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        98 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~  131 (397)
                      .++-|+.+-...      .+.+..|++|+.+..++.+...
T Consensus        81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~va  120 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVA  120 (245)
T ss_pred             hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHH
Confidence            444444322211      1345567899998877766543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.69  E-value=9.3e-05  Score=66.83  Aligned_cols=158  Identities=15%  Similarity=0.126  Sum_probs=96.9

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHH----HHH
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPE----ETQ   89 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~----~l~   89 (397)
                      ...+++-..|||||.-||+..+++|.+     +|++|+.++|..++-      ..  ..-.+.++..|.++.+    .+.
T Consensus        45 ~~~~g~WAVVTGaTDGIGKayA~eLAk-----rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~  119 (312)
T KOG1014|consen   45 KEKLGSWAVVTGATDGIGKAYARELAK-----RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLL  119 (312)
T ss_pred             HHhcCCEEEEECCCCcchHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHH
Confidence            345667899999999999999999999     899999999986431      11  1135778899998765    466


Q ss_pred             HHHccCCC--eeEEEEecccCCC-----cH---HHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961           90 AKLSQLTD--VTHIFYVTWTNRS-----TE---AENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        90 ~~~~~~~~--V~h~a~~~~~~~~-----~~---~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                      +.+.+.|.  .++.++..+....     +.   .....+|+.++..+.+.....  .++-.-++.++|      +   -|
T Consensus       120 ~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS------~---ag  190 (312)
T KOG1014|consen  120 EKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGS------F---AG  190 (312)
T ss_pred             HHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecc------c---cc
Confidence            66777775  6666665442211     11   233467777766555544332  111223443332      1   11


Q ss_pred             CCCCCCCCCCCCCCCCCCCC-cchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          158 KIKPYDPPFTEDMPRLDAPN-FYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~-~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      -              .|.+. ..|+.        ++.|.+.+ +..|+.+-.+-|..|-.
T Consensus       191 ~--------------~p~p~~s~ysasK~~v~~~S~~L~~Ey-~~~gI~Vq~v~p~~VaT  235 (312)
T KOG1014|consen  191 L--------------IPTPLLSVYSASKAFVDFFSRCLQKEY-ESKGIFVQSVIPYLVAT  235 (312)
T ss_pred             c--------------ccChhHHHHHHHHHHHHHHHHHHHHHH-HhcCeEEEEeehhheec
Confidence            0              11111 12443        44455555 67789888888888877

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=97.68  E-value=3.3e-05  Score=53.08  Aligned_cols=34  Identities=15%  Similarity=0.078  Sum_probs=24.1

Q ss_pred             ccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          360 AKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       360 ~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      .++.|++||++ |||+|+++++++++++.+|++++
T Consensus        24 ~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n   58 (62)
T PF13950_consen   24 HLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN   58 (62)
T ss_dssp             EE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred             hhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence            56789999985 79999999999999999999875

...

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.65  E-value=2.2e-05  Score=73.25  Aligned_cols=72  Identities=17%  Similarity=0.139  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ..+++|+||||+|+||+.++++|.+.    .| .+|+.++|+......  -..++..+++.   ++.+++.++|.|+|++
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~----~gv~~lilv~R~~~rl~~--La~el~~~~i~---~l~~~l~~aDiVv~~t  223 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAK----TGVAELLLVARQQERLQE--LQAELGGGKIL---SLEEALPEADIVVWVA  223 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhh----CCCCEEEEEcCCHHHHHH--HHHHhccccHH---hHHHHHccCCEEEECC
Confidence            45689999999999999999999852    23 479989886432210  01112234443   4667889999999997


Q ss_pred             Ee
Q 015961          103 YV  104 (397)
Q Consensus       103 ~~  104 (397)
                      +.
T Consensus       224 s~  225 (340)
T PRK14982        224 SM  225 (340)
T ss_pred             cC
Confidence            64

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.62  E-value=0.00015  Score=69.71  Aligned_cols=73  Identities=18%  Similarity=0.004  Sum_probs=55.4

Q ss_pred             CCCCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH
Q 015961           23 RSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE   86 (397)
Q Consensus        23 ~~~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~   86 (397)
                      +..+++||||||                +|.+|.+++++|.+     .|++|++++++.....  ..+  +..+|+++.+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~-----~Ga~V~~v~~~~~~~~--~~~--~~~~dv~~~~  255 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAAR-----RGADVTLVSGPVNLPT--PAG--VKRIDVESAQ  255 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHH-----CCCEEEEeCCCccccC--CCC--cEEEccCCHH
Confidence            346789999999                99999999999999     8999999998653211  122  3467999987


Q ss_pred             HHHHHH----ccCCCeeEEEEe
Q 015961           87 ETQAKL----SQLTDVTHIFYV  104 (397)
Q Consensus        87 ~l~~~~----~~~~~V~h~a~~  104 (397)
                      ++.+++    ..+|.++|.|+.
T Consensus       256 ~~~~~v~~~~~~~DilI~~Aav  277 (399)
T PRK05579        256 EMLDAVLAALPQADIFIMAAAV  277 (399)
T ss_pred             HHHHHHHHhcCCCCEEEEcccc
Confidence            766655    346778888764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.53  E-value=0.00013  Score=70.54  Aligned_cols=70  Identities=33%  Similarity=0.423  Sum_probs=53.2

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      |+|.|| |++|+.+++.|.+.    ..+ +|++.+|+....     .....+++.+++|+.|.+++.++++++|.|++++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~----~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARR----GPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCT----TCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcC----CCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence            799999 99999999999984    345 899999986431     1133689999999999999999999999999984


Q ss_pred             E
Q 015961          103 Y  103 (397)
Q Consensus       103 ~  103 (397)
                      .
T Consensus        76 g   76 (386)
T PF03435_consen   76 G   76 (386)
T ss_dssp             S
T ss_pred             c
Confidence            3

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.44  E-value=0.00012  Score=59.86  Aligned_cols=105  Identities=15%  Similarity=0.129  Sum_probs=70.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      +||.|+||+|.+|++++..|...+.   ..+++++++.....           ......+.+..+|       .+.++++
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l---~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~a   70 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGL---ADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDA   70 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTT---SSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC---CCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccc
Confidence            4899999999999999999987432   34799999874321           0011122233322       2346778


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      |.|+-.++....+..+..+.++.|..-.+.+.+.+.+.+++...++
T Consensus        71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~viv  116 (141)
T PF00056_consen   71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIV  116 (141)
T ss_dssp             SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred             cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEE
Confidence            8776665433223346788899999999999999998876554333

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK05442 malate dehydrogenase; Provisional

Probab=97.37  E-value=0.0016  Score=60.91  Aligned_cols=104  Identities=16%  Similarity=0.128  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCCCCCCCCceEEEccCCCH-----------HHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-----------EETQAKL   92 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-----------~~l~~~~   92 (397)
                      ++||.|+||+|++|+.++..|.......  .-.+++.++..+....     .+-...|+.|.           ....+.+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~-----~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~   78 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKA-----LEGVVMELDDCAFPLLAGVVITDDPNVAF   78 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccc-----cceeehhhhhhhhhhcCCcEEecChHHHh
Confidence            4699999999999999999887621110  0116888887532110     00011111110           1224668


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  134 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  134 (397)
                      +++|.|+-.|+....+..+..+.+..|..-.+.+.+.+.++.
T Consensus        79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~  120 (326)
T PRK05442         79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA  120 (326)
T ss_pred             CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            889988777664433334788899999999999999998854

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.37  E-value=0.00062  Score=63.45  Aligned_cols=103  Identities=16%  Similarity=0.162  Sum_probs=66.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCCC-------CC----CCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWN-------AD----HLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~~-------~~----~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +||.|+||||++|..++..|+.     .|+  +|++++|.......       .+    ..... .....  .+. +.+.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~-----~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~--~d~-~~l~   71 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAK-----EDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS--SDL-SDVA   71 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC--CCH-HHhC
Confidence            4899999999999999999998     554  59999995411100       00    00100 11111  112 3488


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      ++|.|+-+++.......+..+..+.|+.-.+.+.+.+.+..++.+
T Consensus        72 ~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~  116 (309)
T cd05294          72 GSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTK  116 (309)
T ss_pred             CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence            899877776543222235577889999999999998887755443

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.30  E-value=0.0014  Score=61.24  Aligned_cols=108  Identities=15%  Similarity=0.095  Sum_probs=68.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCC--CC-----CCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKP--NW-----NADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~--~~-----~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      -||.|+||+|++|+.++..|...+...  ...+++.++.....  ..     ..+... ....+..-.....+.++++|.
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~-~~~~~~~i~~~~~~~~~daDv   82 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAF-PLLAGVVATTDPEEAFKDVDA   82 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccc-cccCCcEEecChHHHhCCCCE
Confidence            589999999999999999998621110  11178888885421  10     000000 000011000123466889998


Q ss_pred             eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961           98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus        98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                      |+..|+....+..+..+.+..|..-.+.+.+.+.++++
T Consensus        83 VVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~  120 (323)
T TIGR01759        83 ALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK  120 (323)
T ss_pred             EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            88887754333447888999999999999999998765

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.26  E-value=0.00039  Score=63.69  Aligned_cols=77  Identities=12%  Similarity=0.011  Sum_probs=57.1

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      -++|.|||||.|.++++++.+.... .+..+-+..|+..+-           ..+.+...++.+|..|++++.+..+.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~-~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVF-EGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcc-cCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence            4899999999999999999873222 466677777764321           0011233389999999999999999999


Q ss_pred             CeeEEEEec
Q 015961           97 DVTHIFYVT  105 (397)
Q Consensus        97 ~V~h~a~~~  105 (397)
                      .|+++++.-
T Consensus        86 vivN~vGPy   94 (423)
T KOG2733|consen   86 VIVNCVGPY   94 (423)
T ss_pred             EEEeccccc
Confidence            899997753

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.19  E-value=0.00021  Score=58.61  Aligned_cols=100  Identities=19%  Similarity=0.140  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHcc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ------   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~~------   94 (397)
                      .+.-.|||||..-+|...++.|.+     +|..|..++-..++.    ..-..++-+...|+++.++++.++..      
T Consensus         8 kglvalvtggasglg~ataerlak-----qgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAK-----QGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHh-----cCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            345679999999999999999999     899999999765432    11124678999999999988877654      


Q ss_pred             -CCCeeEEEEecccCC-----C-------cHHHHHHhHHHHHHHHHHH
Q 015961           95 -LTDVTHIFYVTWTNR-----S-------TEAENCKINGSMFRNVLRA  129 (397)
Q Consensus        95 -~~~V~h~a~~~~~~~-----~-------~~~~~~~~nv~gt~~ll~a  129 (397)
                       .|..++||+.+....     .       +.+..+++|+.||-|++..
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl  130 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRL  130 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeee
Confidence             456788877644211     0       3344567899999887653

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.16  E-value=0.0022  Score=59.51  Aligned_cols=108  Identities=19%  Similarity=0.179  Sum_probs=71.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC----CCCC-CCceEEEccCCCHHHHHHHHccCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----WNAD-HLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      +||.|+||+|++|+.++..|..     ++  .++++++......    +... ....+....  ..+++.+.++++|.|+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~-----~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivv   73 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKL-----NPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVV   73 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEE
Confidence            3799999999999999999987     44  3788888761111    0000 111111110  1122456788999888


Q ss_pred             EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961          100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus       100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      -.|+....+..+..+.++.|..-.+.+.+.+.+++++...++
T Consensus        74 itaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~viv  115 (310)
T cd01337          74 IPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILI  115 (310)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            777654333447888999999999999999998866554443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.07  E-value=0.003  Score=58.76  Aligned_cols=108  Identities=14%  Similarity=0.110  Sum_probs=70.6

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCC-CCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ||.|+||+|.||+.++..|.....   ..++.++++.+...    +.. .....+....  +.+++.+.++++|.|+-.|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~---~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvita   75 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPY---VSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPA   75 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC---CcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence            589999999999999999987321   23799998865211    000 0111111101  1112456789999888877


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  140 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  140 (397)
                      +....+..+..+....|..-.+.+.+.+.+.+++...+
T Consensus        76 G~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iii  113 (312)
T TIGR01772        76 GVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMIL  113 (312)
T ss_pred             CCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEE
Confidence            65433344778889999999999999998876554433

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.04  E-value=0.0078  Score=56.23  Aligned_cols=101  Identities=14%  Similarity=0.057  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++||.|+|| |.+|+.++..|..     .+.  +++.+++.....          .....++.+...   +    .+.++
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~-----~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~----~~~~~   72 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVN-----QGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D----YSDCK   72 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C----HHHhC
Confidence            469999997 9999999999987     454  799999865421          000012333222   2    24578


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH  139 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  139 (397)
                      ++|.|+-.|+....+..+..+.+..|+.-.+.+++.+++.++....
T Consensus        73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~v  118 (315)
T PRK00066         73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIF  118 (315)
T ss_pred             CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence            9998887776543333467888999999999999999887654443

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.02  E-value=0.0014  Score=62.01  Aligned_cols=73  Identities=15%  Similarity=0.116  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCChhHHH--HHHHccCCCCCCCCcEEEEEeCCCC--C-C--------------CCCC--CCceEEEccCCC
Q 015961           26 QSVALIVGVTGIVGNS--LAEILPLPDTPGGPWKVYGVARRPK--P-N--------------WNAD--HLVEYVQCDVSD   84 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~--lv~~L~~~~~~~~g~~V~~l~R~~~--~-~--------------~~~~--~~v~~~~~Dl~d   84 (397)
                      +|++|||||++-+|.+  +++.| +     .|.+|+++++...  . .              ....  ..+..+.+|+++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~-----~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss  114 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-G-----AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS  114 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-H-----cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC
Confidence            5899999999999999  89999 7     7999888885321  1 0              0011  134578999999


Q ss_pred             HHHHHHHHc-------cCCCeeEEEEe
Q 015961           85 PEETQAKLS-------QLTDVTHIFYV  104 (397)
Q Consensus        85 ~~~l~~~~~-------~~~~V~h~a~~  104 (397)
                      .+++.++++       .+|.++|.++.
T Consensus       115 ~E~v~~lie~I~e~~G~IDiLVnSaA~  141 (398)
T PRK13656        115 DEIKQKVIELIKQDLGQVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCcc
Confidence            977655443       36667777653

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.95  E-value=0.0012  Score=56.43  Aligned_cols=65  Identities=15%  Similarity=0.098  Sum_probs=39.5

Q ss_pred             CCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCH--HHHHHHHccCCCeeEEEEec
Q 015961           34 VTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP--EETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        34 atGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~--~~l~~~~~~~~~V~h~a~~~  105 (397)
                      .||-.|..|++++..     .|++|+.+.....-.  .+.+++.+...-.+.  +.+.+.+..+|.++|+|+.+
T Consensus        27 SSG~~G~~lA~~~~~-----~Ga~V~li~g~~~~~--~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   27 SSGKMGAALAEEAAR-----RGAEVTLIHGPSSLP--PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             --SHHHHHHHHHHHH-----TT-EEEEEE-TTS------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             CcCHHHHHHHHHHHH-----CCCEEEEEecCcccc--ccccceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence            489999999999999     899999999874211  224677666543221  34555667788889987653

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.90  E-value=0.0063  Score=59.03  Aligned_cols=109  Identities=17%  Similarity=0.103  Sum_probs=71.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCC--CCc--EEEEEeCCCCCCC-----------CCCCCceEEEccCCCHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPW--KVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~--~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      .-||.|+||+|++|++++..|....-..  ++.  +++.+++......           .....+.+..+   +    .+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye  172 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE  172 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            3589999999999999999998721000  143  6888887654320           00112221122   2    35


Q ss_pred             HHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcc-cCCCcceEE
Q 015961           91 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIP-NAPNLRHVC  141 (397)
Q Consensus        91 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~~~~  141 (397)
                      .++++|.|+-.|+....+..+..+..+.|+.-.+.+.+.+.+ ++++.+.++
T Consensus       173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIV  224 (444)
T PLN00112        173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIV  224 (444)
T ss_pred             HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            678899877776643333347888999999999999999998 565555444

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.89  E-value=0.0027  Score=60.87  Aligned_cols=74  Identities=20%  Similarity=0.016  Sum_probs=54.2

Q ss_pred             CCCCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH
Q 015961           23 RSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE   86 (397)
Q Consensus        23 ~~~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~   86 (397)
                      +..+++||||||                ||.+|..++++|..     .|++|+++.+......  ...  ....|+.+.+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~-----~Ga~V~~~~g~~~~~~--~~~--~~~~~v~~~~  252 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYK-----RGADVTLITGPVSLLT--PPG--VKSIKVSTAE  252 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHH-----CCCEEEEeCCCCccCC--CCC--cEEEEeccHH
Confidence            356789999999                47899999999999     8999999887653321  122  3568888887


Q ss_pred             HH-HHHH----ccCCCeeEEEEec
Q 015961           87 ET-QAKL----SQLTDVTHIFYVT  105 (397)
Q Consensus        87 ~l-~~~~----~~~~~V~h~a~~~  105 (397)
                      ++ +..+    ..+|.+++.|+.+
T Consensus       253 ~~~~~~~~~~~~~~D~~i~~Aavs  276 (390)
T TIGR00521       253 EMLEAALNELAKDFDIFISAAAVA  276 (390)
T ss_pred             HHHHHHHHhhcccCCEEEEccccc
Confidence            76 4344    3467788887753

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=96.87  E-value=0.0011  Score=63.37  Aligned_cols=101  Identities=9%  Similarity=0.165  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHH-HHccCCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQA-KLSQLTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~-~~~~~~~V~h~a  102 (397)
                      ++++|.|.||||++|..|++.|.++    ..++|+.+.++...... .........+|+.+.++++. .++++|.||-+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~h----P~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Al  112 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANH----PDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCL  112 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhC----CCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcC
Confidence            5579999999999999999999984    36689999875432110 00111222345443333322 257777555431


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccc
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY  149 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y  149 (397)
                      .    .            ....+++.++. .+   .+++..|+...+
T Consensus       113 p----~------------~~s~~i~~~~~-~g---~~VIDlSs~fRl  139 (381)
T PLN02968        113 P----H------------GTTQEIIKALP-KD---LKIVDLSADFRL  139 (381)
T ss_pred             C----H------------HHHHHHHHHHh-CC---CEEEEcCchhcc
Confidence            1    0            13344555553 22   457777765544

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.82  E-value=0.012  Score=54.91  Aligned_cols=99  Identities=13%  Similarity=0.043  Sum_probs=69.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCCCC-----------CCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNWN-----------ADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~~~-----------~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++|.|.| +|.+|+.++..|+.     .|  ++|++++|.+.....           ....+.+..   .+.    +.+.
T Consensus         1 ~kI~IIG-aG~vG~~~a~~l~~-----~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~   67 (306)
T cd05291           1 RKVVIIG-AGHVGSSFAYSLVN-----QGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCK   67 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----cCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhC
Confidence            4799999 59999999999987     56  589999997643210           011122221   122    3468


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      ++|.|+.+++....+..+..+.++.|..-.+.+.+.++++++...
T Consensus        68 ~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~  112 (306)
T cd05291          68 DADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGI  112 (306)
T ss_pred             CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            899888886644333346788899999999999999998866543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.71  E-value=0.0018  Score=58.97  Aligned_cols=78  Identities=19%  Similarity=0.052  Sum_probs=56.3

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ++.|...++|-|||||.|..++++|.+     +|.+-....|+..+-.  ...-+.++-..++.++..+++.+...+.|+
T Consensus         2 ~~e~e~d~iiYGAtGy~G~lvae~l~~-----~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl   76 (382)
T COG3268           2 PMEREYDIIIYGATGYAGGLVAEYLAR-----EGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL   76 (382)
T ss_pred             CCCcceeEEEEccccchhHHHHHHHHH-----cCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence            455667899999999999999999998     6777766667653310  000123333445555888999999999999


Q ss_pred             EEEEe
Q 015961          100 HIFYV  104 (397)
Q Consensus       100 h~a~~  104 (397)
                      |+++.
T Consensus        77 ncvGP   81 (382)
T COG3268          77 NCVGP   81 (382)
T ss_pred             ecccc
Confidence            99874

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=96.70  E-value=0.0022  Score=56.87  Aligned_cols=62  Identities=16%  Similarity=0.143  Sum_probs=42.8

Q ss_pred             cCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHH-------HccCCCeeEEEEe
Q 015961           33 GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-------LSQLTDVTHIFYV  104 (397)
Q Consensus        33 GatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-------~~~~~~V~h~a~~  104 (397)
                      .++|.||.+++++|.+     +|++|+++++.....  . .  ....+|+.+.+++.+.       +..+|.++|.|+.
T Consensus        22 ~SSGgIG~AIA~~la~-----~Ga~Vvlv~~~~~l~--~-~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        22 HSTGHLGKIITETFLS-----AGHEVTLVTTKRALK--P-E--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             CcccHHHHHHHHHHHH-----CCCEEEEEcChhhcc--c-c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            4599999999999999     899999987642111  0 0  1235788887655443       2346778888774

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.57  E-value=0.0068  Score=52.47  Aligned_cols=113  Identities=13%  Similarity=0.059  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE--EEEEeCCCCCCCCCCCCceEEEc--------cCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK--VYGVARRPKPNWNADHLVEYVQC--------DVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~--V~~l~R~~~~~~~~~~~v~~~~~--------Dl~d~~~l~~~~~   93 (397)
                      .|.+-|||||++.-||..++..+..     .+.+  +++..|....    ..++....|        |++....+.+..+
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~a-----ed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e   74 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILA-----EDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALRE   74 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHh-----cchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHh
Confidence            4667899999999999998888876     3444  5555554322    134444444        4443333333222


Q ss_pred             c-------CCCeeEEEEecccCC-------C--cHHHHHHhHHHHHHHHHHHHccc-CCC--cceEEEecC
Q 015961           94 Q-------LTDVTHIFYVTWTNR-------S--TEAENCKINGSMFRNVLRAVIPN-APN--LRHVCLQTG  145 (397)
Q Consensus        94 ~-------~~~V~h~a~~~~~~~-------~--~~~~~~~~nv~gt~~ll~a~~~~-~~~--~~~~~~~s~  145 (397)
                      .       -+.|+|-|+......       +  ..+.+++.|+.+...|...+... ...  -+.++.+||
T Consensus        75 ~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS  145 (253)
T KOG1204|consen   75 APRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSS  145 (253)
T ss_pred             hhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecc
Confidence            1       234888877533211       1  45678899999988887755443 111  245555553

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.56  E-value=0.025  Score=55.00  Aligned_cols=106  Identities=7%  Similarity=-0.063  Sum_probs=68.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCC-------------CCCCCCceEEEccCCCHHH
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEE   87 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~   87 (397)
                      ...+-+|+||||+|.||.+|+..|.+-.-.+  +-..++.++......             .+....+.+.. |      
T Consensus       120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~------  192 (452)
T cd05295         120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-D------  192 (452)
T ss_pred             CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-C------
Confidence            3344689999999999999999998732211  112355555531111             01111233322 1      


Q ss_pred             HHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961           88 TQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus        88 l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                      ..+.++++|.|+-+++.......+..+..+.|..-.+.+.+++.+..+
T Consensus       193 ~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~  240 (452)
T cd05295         193 LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAK  240 (452)
T ss_pred             CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            146789999888776643333347888899999999999999988754

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.55  E-value=0.0092  Score=56.50  Aligned_cols=36  Identities=25%  Similarity=0.287  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      |+++|+|.||||++|..+++.|.+.    .+++++++.++
T Consensus         1 ~m~kVaIiGAtG~vG~~l~~~L~~~----p~~elv~v~~~   36 (343)
T PRK00436          1 MMIKVGIVGASGYTGGELLRLLLNH----PEVEIVAVTSR   36 (343)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHcC----CCceEEEEECc
Confidence            3479999999999999999999874    46788777764

>PLN02602 lactate dehydrogenase

Probab=96.51  E-value=0.031  Score=52.89  Aligned_cols=105  Identities=15%  Similarity=0.092  Sum_probs=68.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC----CCCCceEEEccCCCHHHHHHHHccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN----ADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~----~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +||.|+|+ |.+|+.++..|+..+..   .+++.++......      +.    ......+ .++ .|.    +.++++|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~---~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy----~~~~daD  107 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLA---DELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDY----AVTAGSD  107 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC---CEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCH----HHhCCCC
Confidence            59999995 99999999999873322   2799999865322      00    0112222 211 122    3478899


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      .|+-.|+....+..+..+.+..|+.-.+.+.+.+++++++...++
T Consensus       108 iVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~iviv  152 (350)
T PLN02602        108 LCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLI  152 (350)
T ss_pred             EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            877776643333336788899999999999999988765544333

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.49  E-value=0.014  Score=53.75  Aligned_cols=105  Identities=18%  Similarity=0.129  Sum_probs=69.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------C-----CCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------N-----ADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~-----~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      +||.|+|| |+||+.++-.|+...   -+.+++.++.......      .     .... ..+.+| .+    .+.++++
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~---~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~----y~~~~~a   70 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQG---LGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD----YEDLKGA   70 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhccc---ccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC----hhhhcCC
Confidence            47999998 999999999997632   1337999998732210      0     0001 122222 12    3457888


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      |.|+-.|+...-+.....+.++.|..-.+.+.+++.+.++....++
T Consensus        71 DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlV  116 (313)
T COG0039          71 DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLV  116 (313)
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            8777776544333347889999999999999999988765444443

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.46  E-value=0.0034  Score=55.67  Aligned_cols=68  Identities=21%  Similarity=0.203  Sum_probs=53.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAK-LSQLTDVTH  100 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h  100 (397)
                      |+++|.| .|-+|+.+++.|.+     .||+|+++++++....   ........+.+|-+|++.|+++ +..+|.++-
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~-----~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva   72 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSE-----EGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVA   72 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHh-----CCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEE
Confidence            4788988 69999999999999     8999999999865421   1124678899999999998876 565664433

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.44  E-value=0.0075  Score=55.68  Aligned_cols=71  Identities=11%  Similarity=0.055  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC---CCC------CC-CCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP---KPN------WN-ADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~---~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      .+++++|||| |-+|++++..|.+     .|++ |++++|+.   .+.      +. ....+.+..+|+.+.+++...+.
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~-----~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCAL-----DGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc
Confidence            4578999997 8999999999998     7876 99999975   111      00 01234456688888777777777


Q ss_pred             cCCCeeEE
Q 015961           94 QLTDVTHI  101 (397)
Q Consensus        94 ~~~~V~h~  101 (397)
                      .+|.|+++
T Consensus       199 ~~DilINa  206 (289)
T PRK12548        199 SSDILVNA  206 (289)
T ss_pred             cCCEEEEe
Confidence            77777765

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.40  E-value=0.02  Score=54.61  Aligned_cols=102  Identities=16%  Similarity=0.045  Sum_probs=64.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE--EEEE--eCCCCCC----------C-CCCCCceEEEccCCCHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK--VYGV--ARRPKPN----------W-NADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~--V~~l--~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      .-||.|+||+|++|++++-.|..........+  ++.+  ++..+..          . +...++.+..+|       .+
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~-------y~  116 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP-------YE  116 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC-------HH
Confidence            46999999999999999999986322111112  3333  4443221          0 001122222222       35


Q ss_pred             HHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961           91 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  134 (397)
Q Consensus        91 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  134 (397)
                      .++++|.|+-.|+....+..+..+.+..|+.-.+.+.+.+.++.
T Consensus       117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a  160 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVA  160 (387)
T ss_pred             HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            68889987777665433334788899999999999999998853

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.38  E-value=0.039  Score=51.31  Aligned_cols=100  Identities=8%  Similarity=0.020  Sum_probs=67.8

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCC-CCCceEEEccCCCHHHHHHHHccC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNA-DHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~-~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      ||.|.|+ |++|+.++..|+..+..   -+++.++......           .+. ...+++..+|       .+.++++
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~---~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~a   69 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLF---SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADA   69 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCC
Confidence            5889997 99999999999873222   2799999864321           001 1134444333       3567889


Q ss_pred             CCeeEEEEecccCCCc--HHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           96 TDVTHIFYVTWTNRST--EAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      |.|+-.|+....+..+  ..+.+..|..-.+.+.+.+.+++++..
T Consensus        70 DivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i  114 (307)
T cd05290          70 DIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAV  114 (307)
T ss_pred             CEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            9877776643322223  588899999999999999998875544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK04148 hypothetical protein; Provisional

Probab=96.36  E-value=0.0045  Score=49.53  Aligned_cols=67  Identities=13%  Similarity=0.046  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      +++|++.| +| .|.+++..|.+     .|++|++++.++... ......++++.+|+.+++-  +..+++|.|+-+
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~-----~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysi   84 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKE-----SGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSI   84 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEe
Confidence            46899999 78 88899999998     899999999886532 1122467899999998863  456777755554

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.32  E-value=0.0043  Score=61.30  Aligned_cols=69  Identities=22%  Similarity=0.151  Sum_probs=53.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHH-HccCCCeeEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  101 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h~  101 (397)
                      |+|+|+|+ |.+|.++++.|.+     +|++|+++++++...  .....+++++.+|.++...+..+ +.+++.|+-+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~-----~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSG-----ENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            47999996 9999999999998     799999999876431  11114688999999999888776 6667654443

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.30  E-value=0.041  Score=51.29  Aligned_cols=104  Identities=13%  Similarity=0.032  Sum_probs=68.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEE-ccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQ-CDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~-~Dl~d~~~l~~~~~~~   95 (397)
                      .||.|+|+ |++|+.++..|.....   .-+++.++......          ........+.. +|   .    +.++++
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~---~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~d---y----~~~~~a   72 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGL---ADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKD---Y----SVTANS   72 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCC---CCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCC---H----HHhCCC
Confidence            58999995 9999999999886322   23799998765321          00001112222 22   2    237888


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      |.|+-.|+...-+..+..+.+..|+.-.+.+.+.+++++++...++
T Consensus        73 divvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~viv  118 (312)
T cd05293          73 KVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLV  118 (312)
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            8777766643333336788899999999999999998865554333

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=96.21  E-value=0.0089  Score=52.50  Aligned_cols=79  Identities=20%  Similarity=0.181  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCC--CCCceEEEccCCCHHHHHHH--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNA--DHLVEYVQCDVSDPEETQAK--   91 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~--~~~v~~~~~Dl~d~~~l~~~--   91 (397)
                      |.|-+||||++.-+|-.++.+|++....+.-..|+...|.-+++         ...  .-.++++.+|+++..++.++  
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            55778999999999999999998732111123355556754332         112  23577999999998765444  


Q ss_pred             -----HccCCCeeEEEE
Q 015961           92 -----LSQLTDVTHIFY  103 (397)
Q Consensus        92 -----~~~~~~V~h~a~  103 (397)
                           ++..|.|+--|+
T Consensus        82 di~~rf~~ld~iylNAg   98 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAG   98 (341)
T ss_pred             HHHHHhhhccEEEEccc
Confidence                 444554544443

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.16  E-value=0.012  Score=46.78  Aligned_cols=68  Identities=21%  Similarity=0.307  Sum_probs=39.7

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCCCCCC----CCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPNWNAD----HLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~~~~~----~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ||.|.|++|-+|+.+++.+.+.    .++++.+. +|++....-.+    .+..  ...+.-.+++++.+..+|.|+.+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~----~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDf   74 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILES----PGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDF   74 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHS----TTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhc----CCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEc
Confidence            7999999999999999999875    68885555 55542211000    0000  11111114566777778866665

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.14  E-value=0.0063  Score=48.29  Aligned_cols=34  Identities=29%  Similarity=0.377  Sum_probs=26.8

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEE-EEeCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVY-GVARRP   65 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~-~l~R~~   65 (397)
                      ||.|+||||++|+.|++.|.++    ..+++. ++.++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~h----p~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEH----PDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHT----STEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcC----CCccEEEeeeecc
Confidence            6999999999999999999985    355644 445544

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.10  E-value=0.02  Score=51.87  Aligned_cols=65  Identities=15%  Similarity=0.190  Sum_probs=41.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      .+|.|+|++|.+|+.+++.+.+.    .+++++++. +.+.....    .  -..++...+++.++++++|.|+++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~----~~~elvav~d~~~~~~~~----~--~~~~i~~~~dl~~ll~~~DvVid~   67 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAA----EDLELVAAVDRPGSPLVG----Q--GALGVAITDDLEAVLADADVLIDF   67 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEecCCccccc----c--CCCCccccCCHHHhccCCCEEEEC
Confidence            58999999999999999998763    467876655 44322210    0  122333334455666677766665

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.10  E-value=0.013  Score=55.40  Aligned_cols=65  Identities=20%  Similarity=0.118  Sum_probs=41.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc---EEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW---KVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~---~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ++|+|.||||++|..|++.|.+     .+|   ++..+.+...... ....+.+....|+.+.     .+.++|.||-+
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~-----~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A   70 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEE-----RNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFS   70 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEEC
Confidence            5899999999999999999987     444   5677877543211 1112334444555431     34577765543

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.07  E-value=0.014  Score=53.24  Aligned_cols=108  Identities=16%  Similarity=0.060  Sum_probs=69.2

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCC----cEEEEEeCCCCCCCC---CCCC-ceEE-EccCCCHHHHHHHHccCCCee
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGP----WKVYGVARRPKPNWN---ADHL-VEYV-QCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g----~~V~~l~R~~~~~~~---~~~~-v~~~-~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      |.|+||+|.+|..++..|+.     .+    .+|+++++.......   .... .... ...+.-.+++.++++++|.|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~-----~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv   75 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLAD-----GSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVI   75 (263)
T ss_pred             CEEECCCChHHHHHHHHHHh-----CCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEE
Confidence            57899999999999999987     45    689999986533200   0000 0000 111111123457789999877


Q ss_pred             EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961          100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus       100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      -.++..........+....|+.-.+.+.+.+++.+++...++
T Consensus        76 ~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~  117 (263)
T cd00650          76 ITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIV  117 (263)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            765543333335667788899999999999998765554443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.06  E-value=0.0062  Score=65.01  Aligned_cols=75  Identities=29%  Similarity=0.186  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCC---------CCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPG---------GPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~---------~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +++|+|.|| |++|+..++.|.+.+...         ....|++.++......   ...++++.+..|+.|.+++.++++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~  647 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS  647 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence            478999995 999999999998743210         0123666676543210   012467889999999999999889


Q ss_pred             cCCCeeEE
Q 015961           94 QLTDVTHI  101 (397)
Q Consensus        94 ~~~~V~h~  101 (397)
                      ++|.|+.+
T Consensus       648 ~~DaVIsa  655 (1042)
T PLN02819        648 QVDVVISL  655 (1042)
T ss_pred             CCCEEEEC
Confidence            98877776

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.05  E-value=0.039  Score=49.24  Aligned_cols=108  Identities=15%  Similarity=0.113  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ..||.|.||.|-||+.|.-.|..+|.++   +....+-...+-   ...+-+-.......+-.+.+.+++.++|.|+-=|
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK~np~Vs---~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPA  104 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLKLNPLVS---ELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPA  104 (345)
T ss_pred             cceEEEEecCCccCccHHHHHhcCcccc---eeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecC
Confidence            3589999999999999988777665554   333333221110   0000011112233333568999999999766554


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      +...-+.=..++.|++|..-.+.|..++.+.+++
T Consensus       105 GVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~  138 (345)
T KOG1494|consen  105 GVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPN  138 (345)
T ss_pred             CCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCcc
Confidence            4322222268999999999999999999887543

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.03  E-value=0.051  Score=48.75  Aligned_cols=91  Identities=16%  Similarity=0.027  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a  102 (397)
                      |.++|||.|||+ =|+.|++.|.+     .|++|++.+-..... .....+.++.|-+.+.+.+.+.++.  ++.|+.. 
T Consensus         1 ~~~~IlvlgGT~-egr~la~~L~~-----~g~~v~~Svat~~g~-~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA-   72 (248)
T PRK08057          1 MMPRILLLGGTS-EARALARALAA-----AGVDIVLSLAGRTGG-PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDA-   72 (248)
T ss_pred             CCceEEEEechH-HHHHHHHHHHh-----CCCeEEEEEccCCCC-cccCCceEEECCCCCHHHHHHHHHHCCCCEEEEC-
Confidence            457899999987 58999999988     788866655433222 2335778888998899999998875  4446665 


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                        +++..          ..-++|+.++|++.+.
T Consensus        73 --THPfA----------~~is~~a~~ac~~~~i   93 (248)
T PRK08057         73 --THPYA----------AQISANAAAACRALGI   93 (248)
T ss_pred             --CCccH----------HHHHHHHHHHHHHhCC
Confidence              22211          1345678899998753

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.83  E-value=0.027  Score=52.77  Aligned_cols=101  Identities=15%  Similarity=0.106  Sum_probs=66.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCCCC---------CCCCce-EEEccCCCHHHHHHHHcc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWN---------ADHLVE-YVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~~---------~~~~v~-~~~~Dl~d~~~l~~~~~~   94 (397)
                      .+||.|+|| |.+|+.++..|..     .| .+|+.++++......         ...+.. .+.+    ..+.+ .+++
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~-----~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~----~~d~~-~l~~   73 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQ-----KNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG----TNNYE-DIKD   73 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHH-----CCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe----CCCHH-HhCC
Confidence            358999996 9999999998887     55 579999986532100         000110 1111    11233 6788


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      +|.|+-.++..........+....|..-.+.+.+.+.+.+++.
T Consensus        74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a  116 (319)
T PTZ00117         74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNA  116 (319)
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            9987777654333333667788899998999999888876544

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.67  E-value=0.091  Score=49.01  Aligned_cols=97  Identities=21%  Similarity=0.152  Sum_probs=65.6

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC------CCC----CCCceEEEccCCCHHHHHHHHccC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN------WNA----DHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~------~~~----~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      +|.|.|+ |.+|+.++..|..     .|  .+|++++++....      +..    .....+..+   |.    +.++++
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~-----~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d~----~~l~~a   68 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLL-----RGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---DY----ADCKGA   68 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHH-----cCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---CH----HHhCCC
Confidence            7999996 9999999999988     56  5899999875321      000    011222222   22    347889


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      |.|+-+++.......+..+....|+.-.+.+.+.+++.+++.
T Consensus        69 DiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~g  110 (308)
T cd05292          69 DVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDA  110 (308)
T ss_pred             CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            877777654333333667778899999999999888876543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.59  E-value=0.032  Score=52.08  Aligned_cols=103  Identities=19%  Similarity=0.190  Sum_probs=63.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC-----CCCC-CceEEEccCCCHHHHHHHHccCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-----NADH-LVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~-----~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      +||.|+|| |.+|+.++..|..     .|. +|+++++.+....     ..+. ......+.+....+. +.++++|.|+
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~-----~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVi   75 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLAL-----KELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVV   75 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEE
Confidence            68999997 9999999999987     554 8999998653220     0000 000000111101112 3478888777


Q ss_pred             EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961          100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus       100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      ..++.......+..+....|+.-.+.+++.+.+..++
T Consensus        76 i~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~  112 (307)
T PRK06223         76 ITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPD  112 (307)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            6654322222255677788999988898888876544

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.58  E-value=0.018  Score=54.76  Aligned_cols=37  Identities=24%  Similarity=0.341  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |+.+|+|+||||++|+.|++.|.+.    ...+++++.++.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~----p~~el~~~~~s~   38 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANH----PWFEVTALAASE   38 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcC----CCceEEEEEcCh
Confidence            4579999999999999999999974    345888885543

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=95.48  E-value=0.023  Score=49.53  Aligned_cols=111  Identities=14%  Similarity=0.110  Sum_probs=55.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceE----------EEccCCCHHHHHHHHccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEY----------VQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~----------~~~Dl~d~~~l~~~~~~~~   96 (397)
                      -+||||||+|.||.+|+..+.+-.-.+....|+..--+........+++..          ...+.+.  +...++++++
T Consensus         5 irVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvatt--d~~~afkdv~   82 (332)
T KOG1496|consen    5 IRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATT--DEVEAFKDVD   82 (332)
T ss_pred             eEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhccc--ChhhhhccCc
Confidence            489999999999999999998621111111222222211110000011110          0111111  1234667776


Q ss_pred             CeeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccC-CCcceEE
Q 015961           97 DVTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNA-PNLRHVC  141 (397)
Q Consensus        97 ~V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~  141 (397)
                      ..+-+.+.  +...  ...+....|+.-.+.=-.|+.++. +.++.++
T Consensus        83 ~ailvGa~--PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlV  128 (332)
T KOG1496|consen   83 VAILVGAM--PRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLV  128 (332)
T ss_pred             EEEEeccc--cCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEE
Confidence            55555332  2222  567788888877665555555542 3344443

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.45  E-value=0.044  Score=51.02  Aligned_cols=104  Identities=13%  Similarity=0.085  Sum_probs=63.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC-----CCCCC-ceEEEccCCCHHHHHHHHccCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-----NADHL-VEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~-----~~~~~-v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      +||.|.|+ |++|+.++..|+.     .|+ +|++++.......     ...+. .....+.+.-..+..+ +.++|.|+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~-----~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVI   74 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAE-----KELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVV   74 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHH-----cCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEE
Confidence            58999995 9999999999987     565 8999998543210     00000 0000011110111223 67788766


Q ss_pred             EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961          100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus       100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      -.++.......+..+....|..-.+.+++.+.++.++.
T Consensus        75 itag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~  112 (305)
T TIGR01763        75 ITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNP  112 (305)
T ss_pred             EcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            66553222222566788899999999999888875443

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.17  E-value=0.015  Score=59.00  Aligned_cols=68  Identities=21%  Similarity=0.115  Sum_probs=52.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLT   96 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~   96 (397)
                      +.++.+|+|.| .|-+|++++++|.+     +|++|++++++++.. ...+.+++.+.||.+|++.++++ ++++|
T Consensus       414 ~~~~~hiiI~G-~G~~G~~la~~L~~-----~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~  483 (558)
T PRK10669        414 VDICNHALLVG-YGRVGSLLGEKLLA-----AGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCAR  483 (558)
T ss_pred             cccCCCEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccC
Confidence            35567999999 79999999999998     799999999876432 11235788999999999887653 34444

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.10  E-value=0.043  Score=52.67  Aligned_cols=35  Identities=26%  Similarity=0.366  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ..++|.|.||+|.+|+.++..|.+     .|++|++.+|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~-----~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTL-----SGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHH-----CCCeEEEeCCC
Confidence            447899999999999999999998     79999999985

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.08  E-value=0.24  Score=46.49  Aligned_cols=98  Identities=13%  Similarity=0.096  Sum_probs=65.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC-----------CCCCCceEEE-ccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-----------NADHLVEYVQ-CDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~-----------~~~~~v~~~~-~Dl~d~~~l~~~~~   93 (397)
                      +||.|.| +|.+|+.++..|+.     .|. +|+.++.++....           ......++.. .|      . +.++
T Consensus         7 ~KI~IIG-aG~vG~~ia~~la~-----~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d------~-~~l~   73 (321)
T PTZ00082          7 RKISLIG-SGNIGGVMAYLIVL-----KNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNN------Y-EDIA   73 (321)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCC------H-HHhC
Confidence            5899999 69999999998887     564 7999998765220           0001122221 22      2 3578


Q ss_pred             cCCCeeEEEEecccCCC-----cHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961           94 QLTDVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      ++|.|+..++....+..     +..+.+..|+.-.+.+++.+.+.++..
T Consensus        74 ~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a  122 (321)
T PTZ00082         74 GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNA  122 (321)
T ss_pred             CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            99988887654332222     556677889998888999888876544

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.03  E-value=0.028  Score=49.65  Aligned_cols=35  Identities=26%  Similarity=0.151  Sum_probs=31.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|.|+||+|.+|+.++..|.+     .|++|++.+|++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~-----~G~~V~v~~r~~~   35 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAK-----AGNKIIIGSRDLE   35 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHh-----CCCEEEEEEcCHH
Confidence            3799999999999999999998     7899999998753

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.02  E-value=0.04  Score=51.20  Aligned_cols=101  Identities=17%  Similarity=0.075  Sum_probs=67.8

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      |.|.|+ |.+|+.++-.|+.     .|  .+++++++.....          .......++..+  .|    .+.+.++|
T Consensus         1 i~iiGa-G~VG~~~a~~l~~-----~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aD   68 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIA-----KGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADAD   68 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCC
Confidence            468894 9999999999987     45  5899999865421          000011222221  12    24688999


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      .|+.+++....+..+..+....|+.-.+.+.+.+++++++...++
T Consensus        69 iVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv  113 (300)
T cd00300          69 IVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILV  113 (300)
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            888887643333346788889999999999999998865554333

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=94.93  E-value=0.059  Score=49.95  Aligned_cols=36  Identities=22%  Similarity=0.221  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      |+.||.|.||+|+.|..|++.|..+|    ..+++..+.+
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp----~ve~~~~ss~   36 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHP----DVELILISSR   36 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCC----CeEEEEeech
Confidence            45789999999999999999999864    4466666543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.76  E-value=0.11  Score=48.58  Aligned_cols=64  Identities=23%  Similarity=0.195  Sum_probs=46.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ...+++|.|.| .|.||+.+++.|..     -|++|++.+|.....    +++..+    ....++.++++.+|.|+.
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~a-----fG~~V~~~~~~~~~~----~~~~~~----~~~~~l~e~l~~aDvvv~  196 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQT-----WGFPLRCWSRSRKSW----PGVQSF----AGREELSAFLSQTRVLIN  196 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCC----CCceee----cccccHHHHHhcCCEEEE
Confidence            34568999999 89999999999998     899999999854321    122211    124467888999986443

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.74  E-value=0.013  Score=45.99  Aligned_cols=64  Identities=28%  Similarity=0.384  Sum_probs=46.2

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCe
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDV   98 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V   98 (397)
                      |+|.| .|-+|..+++.|.+     .+.+|+++++++... .....++.++.||.+|++.++++ ++.++.|
T Consensus         1 vvI~G-~g~~~~~i~~~L~~-----~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~v   66 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKE-----GGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHH-----TTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEE
T ss_pred             eEEEc-CCHHHHHHHHHHHh-----CCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEE
Confidence            68889 58999999999998     677999999986431 11124688999999999988663 3444433

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.73  E-value=0.092  Score=44.14  Aligned_cols=54  Identities=20%  Similarity=0.155  Sum_probs=42.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ...+++|||+|+.+.+|..+++.|.+     .|.+|+.+.|..                    +++.+.+..+|.|+..
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~-----~g~~V~v~~r~~--------------------~~l~~~l~~aDiVIsa   94 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLN-----RNATVTVCHSKT--------------------KNLKEHTKQADIVIVA   94 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhh-----CCCEEEEEECCc--------------------hhHHHHHhhCCEEEEc
Confidence            45678999999866789999999998     788899888852                    3456788888876665

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=94.68  E-value=0.046  Score=51.66  Aligned_cols=64  Identities=17%  Similarity=0.103  Sum_probs=38.7

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcE---EEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWK---VYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~---V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      +|+|.||||++|..|++.|.+     ++|.   +..+.+..... .....+.+....|+. .    ..+.++|.|+-+
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~-----~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-~----~~~~~~D~v~~a   68 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEE-----RNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-I----ESFEGIDIALFS   68 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHh-----CCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-h----HHhcCCCEEEEC
Confidence            589999999999999999987     4555   34444543221 111123445555653 1    234677754444

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=94.65  E-value=0.19  Score=46.64  Aligned_cols=99  Identities=14%  Similarity=0.015  Sum_probs=65.2

Q ss_pred             EEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           31 IVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        31 VtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      |.| +|.+|+.++..|...+..   -++..++......           ......+++..+   +    .+.++++|.|+
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~daDivV   69 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIA---DEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSG---D----YSDCKDADLVV   69 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCC---CEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecC---C----HHHHCCCCEEE
Confidence            457 599999999999873322   2799999865322           001112333222   2    35688899877


Q ss_pred             EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961          100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  140 (397)
Q Consensus       100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  140 (397)
                      -.|+....+..+..+.++.|+.-.+.+.+.+++++++...+
T Consensus        70 itag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vi  110 (299)
T TIGR01771        70 ITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFL  110 (299)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence            77664333334678889999999999999999876554433

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=94.65  E-value=0.089  Score=51.61  Aligned_cols=74  Identities=12%  Similarity=0.024  Sum_probs=50.6

Q ss_pred             cCCCCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCH
Q 015961           22 ARSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP   85 (397)
Q Consensus        22 ~~~~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~   85 (397)
                      ++..+++||||+|                ||-.|..|++.+..     .|++|+.+.-...  .....+++++..+  ..
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~-----~GA~VtlI~Gp~~--~~~p~~v~~i~V~--ta  322 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAA-----AGAEVTLISGPVD--LADPQGVKVIHVE--SA  322 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHH-----CCCcEEEEeCCcC--CCCCCCceEEEec--CH
Confidence            3467899999987                79999999999999     8999999874321  1122467766554  34


Q ss_pred             HHHHHHHc---cCCCeeEEEEe
Q 015961           86 EETQAKLS---QLTDVTHIFYV  104 (397)
Q Consensus        86 ~~l~~~~~---~~~~V~h~a~~  104 (397)
                      +++.+++.   ..|.+++.|+.
T Consensus       323 ~eM~~av~~~~~~Di~I~aAAV  344 (475)
T PRK13982        323 RQMLAAVEAALPADIAIFAAAV  344 (475)
T ss_pred             HHHHHHHHhhCCCCEEEEeccc
Confidence            44433332   25768887664

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.64  E-value=0.04  Score=54.39  Aligned_cols=69  Identities=20%  Similarity=0.213  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC-CCCCceEEEccCCCHHHHHHH-HccCCCee
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQAK-LSQLTDVT   99 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~   99 (397)
                      .+++|+|.|+ |.+|..+++.|.+     .|++|+++++++...  .. ...++.++.||.++++.+.++ +.+++.|+
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~-----~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi  302 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEK-----EGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFI  302 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence            4578999995 9999999999998     799999999876431  10 113678899999999887543 34455443

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=94.61  E-value=0.045  Score=51.92  Aligned_cols=34  Identities=24%  Similarity=0.284  Sum_probs=27.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~   64 (397)
                      ++|.|.||||++|..+++.|.+.    .+++++.+ +++
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~h----P~~el~~l~~s~   35 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNH----PEVEITYLVSSR   35 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC----CCceEEEEeccc
Confidence            47999999999999999999975    36677744 543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.52  E-value=0.033  Score=54.99  Aligned_cols=67  Identities=19%  Similarity=0.077  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ++|+|+|+|+++ +|..+++.|++     .|++|++.++......      ....+++++.+|..+     +...++|.|
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~-----~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~v   72 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKK-----LGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLV   72 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEE
Confidence            358999999877 99999999999     8999999998642211      112357788888765     234567767


Q ss_pred             eEEE
Q 015961           99 THIF  102 (397)
Q Consensus        99 ~h~a  102 (397)
                      ++.+
T Consensus        73 v~~~   76 (450)
T PRK14106         73 VVSP   76 (450)
T ss_pred             EECC
Confidence            6653

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.38  E-value=0.074  Score=54.44  Aligned_cols=70  Identities=14%  Similarity=0.113  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h  100 (397)
                      .+.+|+|.| .|-+|+.+++.|.+     .|++++++++++... .....+..++.||.+|++.++++ +.+++.|+-
T Consensus       399 ~~~~vII~G-~Gr~G~~va~~L~~-----~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~  470 (601)
T PRK03659        399 DKPQVIIVG-FGRFGQVIGRLLMA-----NKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVI  470 (601)
T ss_pred             ccCCEEEec-CchHHHHHHHHHHh-----CCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEE
Confidence            346899999 79999999999998     799999999886532 11224678999999999988663 444554333

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.27  E-value=0.17  Score=48.97  Aligned_cols=68  Identities=15%  Similarity=0.097  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCee
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT   99 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~   99 (397)
                      ..|+|||+| +|.+|..++..+.+     .|++|++++..+........ -.++..|..|.+.+.+.++  ++|.|+
T Consensus        11 ~~~~ilIiG-~g~~~~~~~~a~~~-----~G~~v~~~~~~~~~~~~~~a-d~~~~~~~~d~~~l~~~~~~~~id~vi   80 (395)
T PRK09288         11 SATRVMLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQVA-HRSHVIDMLDGDALRAVIEREKPDYIV   80 (395)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCchHHhh-hheEECCCCCHHHHHHHHHHhCCCEEE
Confidence            346899999 58999999999888     79999999987643211000 1256788889988888777  555444

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.17  E-value=0.21  Score=47.13  Aligned_cols=36  Identities=33%  Similarity=0.339  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      .+..+|+|.| .|.+|+.++..|..     .|. +|++++++.
T Consensus        22 L~~~~VlVvG-~GglGs~va~~La~-----aGvg~i~lvD~D~   58 (339)
T PRK07688         22 LREKHVLIIG-AGALGTANAEMLVR-----AGVGKVTIVDRDY   58 (339)
T ss_pred             hcCCcEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEEeCCc
Confidence            3457899999 59999999999998     677 699999864

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=94.16  E-value=0.056  Score=50.55  Aligned_cols=72  Identities=22%  Similarity=0.261  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHH-HHHHHHccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPE-ETQAKLSQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~-~l~~~~~~~~~V~h~  101 (397)
                      |+++||+.| +||+...+++.|.++    ...+|++.+|.....  .-...+++.+..|+.+.+ .++...+..|.|+.+
T Consensus         1 ~~~~vlllg-sg~v~~p~~d~ls~~----~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSL   75 (445)
T KOG0172|consen    1 TKKGVLLLG-SGFVSRPVADFLSRK----KDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISL   75 (445)
T ss_pred             CCcceEEec-CccccchHHHHHhhc----CCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeee
Confidence            457899999 799999999999985    455788888754322  223345889999999998 888888888866555

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=94.10  E-value=0.13  Score=48.72  Aligned_cols=23  Identities=39%  Similarity=0.553  Sum_probs=21.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPL   48 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~   48 (397)
                      +.+|.|.||||++|..|++.|.+
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~   29 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTD   29 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHh
Confidence            46899999999999999999987

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.07  E-value=0.061  Score=46.37  Aligned_cols=35  Identities=29%  Similarity=0.304  Sum_probs=28.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      ++|.|.| +|.||+.|+++|.+     .||+|+.-+|+.++
T Consensus         2 ~~~~i~G-tGniG~alA~~~a~-----ag~eV~igs~r~~~   36 (211)
T COG2085           2 MIIAIIG-TGNIGSALALRLAK-----AGHEVIIGSSRGPK   36 (211)
T ss_pred             cEEEEec-cChHHHHHHHHHHh-----CCCeEEEecCCChh
Confidence            4566655 99999999999999     89999888776543

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.97  E-value=0.058  Score=50.78  Aligned_cols=22  Identities=41%  Similarity=0.564  Sum_probs=20.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPL   48 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~   48 (397)
                      .+|.|+||||++|..|++.|.+
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~   26 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEE   26 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhh
Confidence            6899999999999999999996

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=93.82  E-value=0.18  Score=48.38  Aligned_cols=65  Identities=20%  Similarity=0.128  Sum_probs=50.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ++|+|.|+ |.+|.-++..+.+     .|++|++++..+....... --..+.+|..|.+.+.+..+.+|.|
T Consensus         3 ~~igilG~-Gql~~ml~~aa~~-----lG~~v~~~d~~~~~pa~~~-ad~~~~~~~~D~~~l~~~a~~~dvi   67 (372)
T PRK06019          3 KTIGIIGG-GQLGRMLALAAAP-----LGYKVIVLDPDPDSPAAQV-ADEVIVADYDDVAALRELAEQCDVI   67 (372)
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----cCCEEEEEeCCCCCchhHh-CceEEecCCCCHHHHHHHHhcCCEE
Confidence            68999995 8999999999988     8999999998654321100 1135678999999999988888753

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=93.81  E-value=0.66  Score=40.56  Aligned_cols=105  Identities=16%  Similarity=0.143  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ..+|++||+|-.  -.|+..+++.|.+     +|.++...-..+.  +.   +. ....--+++||+++.+++++.+.  
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~-----~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAE-----QGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHH-----cCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence            457999999964  5799999999999     8988654443321  10   10 11223468999999987766554  


Q ss_pred             -----cCCCeeEEEEecccCC------C-cH---HHHHHhHHHHHHHHHHHHccc
Q 015961           94 -----QLTDVTHIFYVTWTNR------S-TE---AENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~-~~---~~~~~~nv~gt~~ll~a~~~~  133 (397)
                           ..|.++|..+.+--..      + +.   ....++..-+...+.++++..
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~l  133 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPL  133 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHh
Confidence                 4677999876532110      0 12   222344455555666666654

>PRK10537 voltage-gated potassium channel; Provisional

Probab=93.64  E-value=0.1  Score=50.32  Aligned_cols=67  Identities=10%  Similarity=-0.008  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHH-HccCCCee
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-LSQLTDVT   99 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~   99 (397)
                      +++|+|.| .|-+|+.++++|.+     +|++|++++.+.... ....++.++.||.+|++.++++ +++++.|+
T Consensus       240 k~HvII~G-~g~lg~~v~~~L~~-----~g~~vvVId~d~~~~-~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI  307 (393)
T PRK10537        240 KDHFIICG-HSPLAINTYLGLRQ-----RGQAVTVIVPLGLEH-RLPDDADLIPGDSSDSAVLKKAGAARARAIL  307 (393)
T ss_pred             CCeEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECchhhh-hccCCCcEEEeCCCCHHHHHhcCcccCCEEE
Confidence            46899999 68999999999987     788888887653221 1235688999999999887653 34455444

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=93.54  E-value=0.11  Score=55.16  Aligned_cols=114  Identities=17%  Similarity=0.130  Sum_probs=75.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCC---------CCCCCCce--EEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN---------WNADHLVE--YVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~---------~~~~~~v~--~~~~Dl~d~~~l~~~~~   93 (397)
                      .|..+|+||-|-.|-.|+..|..     +|.+ ++..+|+.-+.         | ...+|.  +-.-|++..+.-..+++
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~-----RGar~lVLtSRsGirtGYQa~~vrrW-r~~GVqV~vsT~nitt~~ga~~Li~ 1841 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQ-----RGARKLVLTSRSGIRTGYQALMVRRW-RRRGVQVQVSTSNITTAEGARGLIE 1841 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHh-----cCceEEEEeccccchhhHHHHHHHHH-HhcCeEEEEecccchhhhhHHHHHH
Confidence            47899999999999999999998     7877 56566654322         2 123443  34456666555455554


Q ss_pred             cC------CCeeEEEEecc---cCCC---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           94 QL------TDVTHIFYVTW---TNRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        94 ~~------~~V~h~a~~~~---~~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                      .+      -.|||+|..-.   ....   +.++..+.-+.||.||=...|+.++.+..|+..||
T Consensus      1842 ~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSS 1905 (2376)
T KOG1202|consen 1842 ESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSS 1905 (2376)
T ss_pred             HhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEe
Confidence            43      34999875421   1111   44555677888999988888888777888875553

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.46  E-value=0.12  Score=53.08  Aligned_cols=70  Identities=13%  Similarity=0.091  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h  100 (397)
                      ..++|+|.| .|-+|+.+++.|.+     +|+++++++.++... .....+.+++.||.+|++.++++ +++++.|+-
T Consensus       399 ~~~~vII~G-~Gr~G~~va~~L~~-----~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv  470 (621)
T PRK03562        399 QQPRVIIAG-FGRFGQIVGRLLLS-----SGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN  470 (621)
T ss_pred             ccCcEEEEe-cChHHHHHHHHHHh-----CCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEE
Confidence            357899999 69999999999998     799999999886532 11224788999999999987652 344443333

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.34  E-value=0.15  Score=47.43  Aligned_cols=36  Identities=17%  Similarity=0.236  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      |+.+|.|.||||++|..|++.|.+++    ..++..+..+
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp----~~~l~~~~s~   36 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRS----DIELLSIPEA   36 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCC----CeEEEEEecC
Confidence            56789999999999999999999853    4467777654

>PLN02928 oxidoreductase family protein

Probab=93.34  E-value=0.17  Score=48.03  Aligned_cols=70  Identities=17%  Similarity=0.112  Sum_probs=45.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCC-----CCCceEEEccCCCHHHHHHHHccCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-----DHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~-----~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ...+|+|.|.| .|-||+.+++.|..     -|.+|++.+|........     ...+.-+........++.++++.+|.
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~a-----fG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDi  229 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRP-----FGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADI  229 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhh-----CCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCE
Confidence            45679999999 79999999999987     899999999863221000     00111111011134467888999986


Q ss_pred             e
Q 015961           98 V   98 (397)
Q Consensus        98 V   98 (397)
                      |
T Consensus       230 V  230 (347)
T PLN02928        230 V  230 (347)
T ss_pred             E
Confidence            3

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=93.26  E-value=0.055  Score=49.83  Aligned_cols=66  Identities=15%  Similarity=0.091  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      .+++|+|+| .|.+|+.+++.|..     .|++|++.+|++.... ....+...     .+.+++.+.+.++|.|+.+
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~-----~G~~V~v~~R~~~~~~~~~~~g~~~-----~~~~~l~~~l~~aDiVint  216 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSA-----LGARVFVGARSSADLARITEMGLIP-----FPLNKLEEKVAEIDIVINT  216 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHCCCee-----ecHHHHHHHhccCCEEEEC
Confidence            468999999 59999999999998     7899999999754210 00011221     1234567778888876664

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=93.20  E-value=0.72  Score=42.82  Aligned_cols=96  Identities=18%  Similarity=0.155  Sum_probs=61.5

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC------CC-----CCCceEEEccCCCHHHHHHHHccCC
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW------NA-----DHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~------~~-----~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      |.|+|| |.+|+.++..|..     .|. +|+++++++....      ..     .....+ ... .|   . +.++++|
T Consensus         1 I~IIGa-G~vG~~ia~~la~-----~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~-~~l~dAD   68 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLAL-----KELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-ND---Y-EDIAGSD   68 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHh-----CCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---H-HHhCCCC
Confidence            568997 9999999998887     555 9999998754210      00     001111 110 12   2 3478899


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      .|+.+++.......+..+....|+.-.+.+++.+.+..+.
T Consensus        69 iVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~  108 (300)
T cd01339          69 VVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPN  108 (300)
T ss_pred             EEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            8887765432222355667778998888888888887543

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.13  E-value=0.17  Score=47.21  Aligned_cols=34  Identities=26%  Similarity=0.362  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +++|.|.| +|.+|+.++..|.+     .||+|+..+|+.
T Consensus         4 ~m~I~iiG-~G~~G~~lA~~l~~-----~G~~V~~~~r~~   37 (308)
T PRK14619          4 PKTIAILG-AGAWGSTLAGLASA-----NGHRVRVWSRRS   37 (308)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHH-----CCCEEEEEeCCC
Confidence            36899998 79999999999998     899999999864

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=93.08  E-value=0.45  Score=42.50  Aligned_cols=37  Identities=16%  Similarity=0.198  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK   66 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~   66 (397)
                      +.+|.|.||+|-.|+.+++.+.+.    .+++ +-+++|.+.
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~----~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEA----PDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcC----CCceEEEEEecCCc
Confidence            468999999999999999999985    4566 556666643

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=93.06  E-value=0.35  Score=38.98  Aligned_cols=33  Identities=30%  Similarity=0.343  Sum_probs=27.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   64 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~   64 (397)
                      .++|+|.| .|-+|+.+++.|..     .|. +++.++.+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~-----~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLAR-----SGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHH-----HTTSEEEEEESS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHH-----hCCCceeecCCc
Confidence            36899999 69999999999998     576 58888875

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=92.95  E-value=0.27  Score=47.25  Aligned_cols=65  Identities=15%  Similarity=0.103  Sum_probs=48.3

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCee
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT   99 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~   99 (397)
                      ||+|.| +|.+|..+++.+.+     .|++|++++..+........ -+.+.+|..|.+.+.+..+  ++|.|+
T Consensus         1 kililG-~g~~~~~l~~aa~~-----~G~~v~~~d~~~~~~~~~~a-d~~~~~~~~d~~~l~~~~~~~~id~v~   67 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQVA-HRSYVINMLDGDALRAVIEREKPDYIV   67 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEeCCCCCchhhhC-ceEEEcCCCCHHHHHHHHHHhCCCEEE
Confidence            589999 69999999999988     89999999987643211111 1356678889988888777  466544

This enzyme is an alternative to PurN (TIGR00639)

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=92.93  E-value=0.28  Score=45.77  Aligned_cols=62  Identities=19%  Similarity=0.074  Sum_probs=45.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ...+|+|.|.| .|-||+.+++.|..     -|.+|++.+|.....   ...+.        ..+++++++.+|. ++|+
T Consensus       142 ~L~gktvGIiG-~G~IG~~vA~~~~~-----fgm~V~~~d~~~~~~---~~~~~--------~~~l~ell~~sDvv~lh~  204 (311)
T PRK08410        142 EIKGKKWGIIG-LGTIGKRVAKIAQA-----FGAKVVYYSTSGKNK---NEEYE--------RVSLEELLKTSDIISIHA  204 (311)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhh-----cCCEEEEECCCcccc---ccCce--------eecHHHHhhcCCEEEEeC
Confidence            45679999999 89999999999987     799999999853221   11121        2247788888886 5554

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=92.92  E-value=0.073  Score=49.30  Aligned_cols=66  Identities=18%  Similarity=0.096  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      .+++|+|+| .|-+|..++..|..     .|.+|++++|++... .....+.+++     +.+++.+.+.++|.|+++
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~-----~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t  217 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKA-----LGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT  217 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence            468999999 59999999999998     788999999985431 0001122222     234567778888877775

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.83  E-value=0.21  Score=45.94  Aligned_cols=54  Identities=24%  Similarity=0.252  Sum_probs=43.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ..+|+|.|.|.+|.+|+.++..|++     +|+.|++..|...                    ++.+..+.+|.|+-+.
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~-----~gatVtv~~~~t~--------------------~l~e~~~~ADIVIsav  210 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQ-----AHCSVTVVHSRST--------------------DAKALCRQADIVVAAV  210 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEECCCCC--------------------CHHHHHhcCCEEEEec
Confidence            3579999999999999999999998     8999999977532                    2456677788666653

>PRK06849 hypothetical protein; Provisional

Probab=92.81  E-value=0.15  Score=49.33  Aligned_cols=36  Identities=17%  Similarity=0.102  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ++++|||||+...+|..+++.|.+     .|++|++++..+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~-----~G~~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHN-----AGHTVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCc
Confidence            458999999999999999999999     899999998864

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=92.67  E-value=0.9  Score=42.93  Aligned_cols=35  Identities=31%  Similarity=0.294  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      +.++|+|.| .|-+|+++++.|.+     .|+ ++++++++.
T Consensus        23 ~~~~VlIiG-~GglGs~va~~La~-----aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVG-AGALGAANAEALVR-----AGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCCc
Confidence            457899999 57899999999998     687 688888864

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=92.66  E-value=0.18  Score=36.46  Aligned_cols=33  Identities=27%  Similarity=0.359  Sum_probs=29.3

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +|+|.| .|++|-.++..|.+     .|.+|+.+.|++.
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~-----~g~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAE-----LGKEVTLIERSDR   33 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHH-----TTSEEEEEESSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHH-----hCcEEEEEeccch
Confidence            588999 69999999999998     7899999999753

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=92.58  E-value=0.63  Score=41.84  Aligned_cols=89  Identities=19%  Similarity=0.091  Sum_probs=58.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCCC--CCCCCceEEEccCCCHHHHHHHHcc--CCCeeEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHI  101 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~  101 (397)
                      |+|||.|||+ =|+.|++.|.+     .|+ |+.-+ -+.....  ...+.+.++.+-+.+.+.+.+.++.  ++.|+..
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~-----~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA   73 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAE-----AGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDA   73 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHh-----cCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            5899999987 58999999998     777 44322 2211111  1224678888998899999998864  4445555


Q ss_pred             EEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961          102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus       102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                         +++..          ..-++|+.++|++.+.
T Consensus        74 ---THPfA----------~~is~na~~a~~~~~i   94 (249)
T PF02571_consen   74 ---THPFA----------AEISQNAIEACRELGI   94 (249)
T ss_pred             ---CCchH----------HHHHHHHHHHHhhcCc
Confidence               22211          1345678999998763

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=92.54  E-value=0.41  Score=48.66  Aligned_cols=70  Identities=13%  Similarity=0.029  Sum_probs=51.6

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      +..+.|+|+|.| .|.+|.-++..+.+     .|++|++++.++........ -..+.+|..|.+.+.+..+.+|.|
T Consensus        18 ~~~~~k~IgIIG-gGqlg~mla~aA~~-----lG~~Vi~ld~~~~apa~~~A-D~~~v~~~~D~~~l~~~a~~~dvI   87 (577)
T PLN02948         18 HGVSETVVGVLG-GGQLGRMLCQAASQ-----MGIKVKVLDPLEDCPASSVA-ARHVVGSFDDRAAVREFAKRCDVL   87 (577)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCchhhhC-ceeeeCCCCCHHHHHHHHHHCCEE
Confidence            345668999999 58999999999998     79999999886542211001 124568899999888888877643

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=92.54  E-value=0.29  Score=46.45  Aligned_cols=34  Identities=18%  Similarity=0.179  Sum_probs=25.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcE---EEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK---VYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~---V~~l~R~   64 (397)
                      .+|.|.||||++|..|++.|++.    ..+.   ++.++..
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~----~~f~~~~l~~~ss~   38 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEE----NDFDLIEPVFFSTS   38 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhC----CCCCcCcEEEecch
Confidence            58999999999999999966654    3444   6666653

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.47  E-value=0.27  Score=45.01  Aligned_cols=54  Identities=17%  Similarity=0.199  Sum_probs=43.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ..+++|+|+|+++.+|+.++..|.+     .|..|+.+.++.                    .++.+.+..+|.|+...
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~-----~gatVtv~~s~t--------------------~~l~~~~~~ADIVIsAv  209 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQ-----KNASVTILHSRS--------------------KDMASYLKDADVIVSAV  209 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHHHhhCCEEEECC
Confidence            4568999999999999999999998     788999887642                    23567788888766653

>PRK13243 glyoxylate reductase; Reviewed

Probab=92.42  E-value=0.12  Score=48.65  Aligned_cols=65  Identities=17%  Similarity=0.155  Sum_probs=44.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ...+|+|.|.| .|.||+.+++.|..     .|++|++.+|..........++     .   ..++.++++.+|. ++|+
T Consensus       147 ~L~gktvgIiG-~G~IG~~vA~~l~~-----~G~~V~~~d~~~~~~~~~~~~~-----~---~~~l~ell~~aDiV~l~l  212 (333)
T PRK13243        147 DVYGKTIGIIG-FGRIGQAVARRAKG-----FGMRILYYSRTRKPEAEKELGA-----E---YRPLEELLRESDFVSLHV  212 (333)
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCCCChhhHHHcCC-----E---ecCHHHHHhhCCEEEEeC
Confidence            34679999999 69999999999998     7999999998643211000011     1   1246677888886 3443

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=92.41  E-value=0.59  Score=46.94  Aligned_cols=105  Identities=10%  Similarity=0.036  Sum_probs=67.9

Q ss_pred             ccccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCC-CCC-----------CCCCCceEEE
Q 015961           13 RKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK-PNW-----------NADHLVEYVQ   79 (397)
Q Consensus        13 ~~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~-~~~-----------~~~~~v~~~~   79 (397)
                      -.||+.-     ...+|+|.| .|-+|++++..|+.     .|.. |++++-+.. .+.           .-++++.+..
T Consensus       121 ~~rF~~q-----R~akVlVlG-~Gg~~s~lv~sL~~-----sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~  189 (637)
T TIGR03693       121 ALKFELS-----RNAKILAAG-SGDFLTKLVRSLID-----SGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQE  189 (637)
T ss_pred             hhhhhhh-----hcccEEEEe-cCchHHHHHHHHHh-----cCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEe
Confidence            3556533     345899999 78899999999998     5654 777754322 110           0145777777


Q ss_pred             ccCCCHHHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           80 CDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        80 ~Dl~d~~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      .|..+.+++.+.+++.|.|++++-     .        .+....+.+.++|.+.++...-++
T Consensus       190 i~~~~~~dl~ev~~~~DiVi~vsD-----d--------y~~~~Lr~lN~acvkegk~~IPai  238 (637)
T TIGR03693       190 IDFAEDQHLHEAFEPADWVLYVSD-----N--------GDIDDLHALHAFCKEEGKGFIPAI  238 (637)
T ss_pred             ccCCcchhHHHhhcCCcEEEEECC-----C--------CChHHHHHHHHHHHHcCCCeEEEE
Confidence            777888899999999998888732     1        122234456677776654444443

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=92.36  E-value=0.76  Score=39.82  Aligned_cols=37  Identities=24%  Similarity=0.310  Sum_probs=29.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~   65 (397)
                      ..+..+|+|.|+.| +|+.+++.|..     .|.. ++.++.+.
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~-----~GVg~i~lvD~d~   53 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVL-----AGIDSITIVDHRL   53 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHH-----cCCCEEEEEECCc
Confidence            34457899999766 99999999998     5765 88888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.25  E-value=0.34  Score=44.48  Aligned_cols=55  Identities=18%  Similarity=0.154  Sum_probs=42.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ...+|+|+|.|++|.+|+.++..|++     .|..|+++.|+.                    .++.+.++++|.|++..
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~-----~gatVtv~~~~t--------------------~~L~~~~~~aDIvI~At  210 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLN-----ANATVTICHSRT--------------------QNLPELVKQADIIVGAV  210 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHh-----CCCEEEEEeCCc--------------------hhHHHHhccCCEEEEcc
Confidence            34568999999999999999999998     778888887631                    22455667888777763

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=92.15  E-value=0.27  Score=45.46  Aligned_cols=32  Identities=25%  Similarity=0.307  Sum_probs=26.5

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      +|.|.||||+.|..|++.|..+|    ..++..+.-
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP----~~el~~l~s   34 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRD----DIELLSIAP   34 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCC----CeEEEEEec
Confidence            69999999999999999999863    446666653

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=92.14  E-value=0.19  Score=47.58  Aligned_cols=33  Identities=21%  Similarity=0.390  Sum_probs=26.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      .+|.|+||||++|++|++.|.++    ...+|..+.+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~----~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKH----PYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC----CCceEEEEEE
Confidence            37999999999999999999874    3458777743

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=92.14  E-value=0.21  Score=43.32  Aligned_cols=37  Identities=24%  Similarity=0.138  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ...+|+|+|+|. |.+|+++++.|.+     .|++|++.++++
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~-----~G~~Vvv~D~~~   61 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLE-----EGAKLIVADINE   61 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEcCCH
Confidence            345689999995 8999999999998     899999888764

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06436 glycerate dehydrogenase; Provisional

Probab=92.07  E-value=0.39  Score=44.55  Aligned_cols=59  Identities=17%  Similarity=0.135  Sum_probs=42.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ...+|+|.|.| .|.||+.+++.|..     -|++|++.+|....     .++...      ..+++++++.+|.|
T Consensus       119 ~L~gktvgIiG-~G~IG~~vA~~l~a-----fG~~V~~~~r~~~~-----~~~~~~------~~~l~ell~~aDiv  177 (303)
T PRK06436        119 LLYNKSLGILG-YGGIGRRVALLAKA-----FGMNIYAYTRSYVN-----DGISSI------YMEPEDIMKKSDFV  177 (303)
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCCCcc-----cCcccc------cCCHHHHHhhCCEE
Confidence            45679999999 89999999998876     79999999986432     122110      12466778888863

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=91.94  E-value=0.28  Score=41.71  Aligned_cols=39  Identities=28%  Similarity=0.346  Sum_probs=32.9

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ....+++|.|.| .|-||+.+++.|..     -|.+|++.+|...
T Consensus        32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~   70 (178)
T PF02826_consen   32 RELRGKTVGIIG-YGRIGRAVARRLKA-----FGMRVIGYDRSPK   70 (178)
T ss_dssp             S-STTSEEEEES-TSHHHHHHHHHHHH-----TT-EEEEEESSCH
T ss_pred             cccCCCEEEEEE-EcCCcCeEeeeeec-----CCceeEEecccCC
Confidence            344678999999 79999999999998     8999999999764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07877 hypothetical protein; Provisional

Probab=91.93  E-value=0.31  Score=50.55  Aligned_cols=45  Identities=20%  Similarity=0.206  Sum_probs=34.4

Q ss_pred             cccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCC
Q 015961           14 KKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRP   65 (397)
Q Consensus        14 ~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~   65 (397)
                      .+|..++-......+|+|.|+ | +|++++..|..     .|.  ++++++.+.
T Consensus        95 ~~ig~~~Q~~L~~~~V~IvG~-G-lGs~~a~~Lar-----aGvvG~l~lvD~D~  141 (722)
T PRK07877         95 NKITAEEQERLGRLRIGVVGL-S-VGHAIAHTLAA-----EGLCGELRLADFDT  141 (722)
T ss_pred             hhCCHHHHHHHhcCCEEEEEe-c-HHHHHHHHHHH-----ccCCCeEEEEcCCE
Confidence            445555555556789999998 8 99999999998     563  688888753

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=91.86  E-value=0.35  Score=45.28  Aligned_cols=65  Identities=23%  Similarity=0.211  Sum_probs=45.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      +..+|++.|.| .|-||+.+++.|..     -|.+|...+|++........+..+  .+      +.++++.+|. ++||
T Consensus       143 ~l~gktvGIiG-~GrIG~avA~r~~~-----Fgm~v~y~~~~~~~~~~~~~~~~y--~~------l~ell~~sDii~l~~  208 (324)
T COG1052         143 DLRGKTLGIIG-LGRIGQAVARRLKG-----FGMKVLYYDRSPNPEAEKELGARY--VD------LDELLAESDIISLHC  208 (324)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhc-----CCCEEEEECCCCChHHHhhcCcee--cc------HHHHHHhCCEEEEeC
Confidence            34579999999 99999999999996     899999999986421100011222  22      5677888886 4554

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=91.73  E-value=0.22  Score=39.64  Aligned_cols=32  Identities=19%  Similarity=0.395  Sum_probs=26.9

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      |.|.|+||.||+..++-+.+.+   ..++|++++=
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~---d~f~v~~Lsa   32 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHP---DKFEVVALSA   32 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCT---TTEEEEEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCC---CceEEEEEEc
Confidence            6899999999999998888743   4688988884

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=91.71  E-value=0.17  Score=47.15  Aligned_cols=33  Identities=21%  Similarity=0.361  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ++|.|+| +|++|+.++..|++     .|++|++++|++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~-----~G~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFAR-----AGHEVRLWDADP   35 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHH-----CCCeeEEEeCCH
Confidence            4799999 89999999999998     899999999975

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=91.69  E-value=0.2  Score=47.50  Aligned_cols=35  Identities=20%  Similarity=0.217  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |.++|.|.| +|.+|+.++..|.+     .|++|++++|++
T Consensus         1 ~~mkI~IiG-~G~mG~~~A~~L~~-----~G~~V~~~~r~~   35 (341)
T PRK08229          1 MMARICVLG-AGSIGCYLGGRLAA-----AGADVTLIGRAR   35 (341)
T ss_pred             CCceEEEEC-CCHHHHHHHHHHHh-----cCCcEEEEecHH
Confidence            456899999 79999999999998     799999999964

>PRK08655 prephenate dehydrogenase; Provisional

Probab=91.67  E-value=0.2  Score=49.16  Aligned_cols=35  Identities=31%  Similarity=0.368  Sum_probs=31.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|.|+||+|.+|+.+++.|.+     .|++|++++|++.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~-----~G~~V~v~~r~~~   35 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKE-----KGFEVIVTGRDPK   35 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHH-----CCCEEEEEECChH
Confidence            3799999999999999999998     7999999999754

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=91.62  E-value=0.31  Score=45.64  Aligned_cols=66  Identities=17%  Similarity=0.137  Sum_probs=44.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ..++|++-|.| .|-||+++++.|..     -|.+|++.++........  ....     .-.+++++.++.+|. ++|+
T Consensus       139 el~gkTvGIiG-~G~IG~~va~~l~a-----fgm~v~~~d~~~~~~~~~--~~~~-----~~~~~Ld~lL~~sDiv~lh~  205 (324)
T COG0111         139 ELAGKTVGIIG-LGRIGRAVAKRLKA-----FGMKVIGYDPYSPRERAG--VDGV-----VGVDSLDELLAEADILTLHL  205 (324)
T ss_pred             cccCCEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEECCCCchhhhc--cccc-----eecccHHHHHhhCCEEEEcC
Confidence            34689999999 89999999999998     899999999943322110  0001     112346677787876 4444

>PRK07574 formate dehydrogenase; Provisional

Probab=91.52  E-value=0.21  Score=47.96  Aligned_cols=62  Identities=18%  Similarity=0.022  Sum_probs=43.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ..+++|.|.| .|-||+.+++.|..     -|++|++.+|...... ....+++       -..+++++++.+|.|
T Consensus       190 L~gktVGIvG-~G~IG~~vA~~l~~-----fG~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvV  252 (385)
T PRK07574        190 LEGMTVGIVG-AGRIGLAVLRRLKP-----FDVKLHYTDRHRLPEEVEQELGLT-------YHVSFDSLVSVCDVV  252 (385)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCCchhhHhhcCce-------ecCCHHHHhhcCCEE
Confidence            4578999999 79999999999998     7999999998652211 0001111       122467788889863

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=91.39  E-value=0.3  Score=46.70  Aligned_cols=61  Identities=18%  Similarity=0.025  Sum_probs=43.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ..+++|.|.| .|.||+.+++.|..     -|++|++.++.....     ..   ..   ...+++++++.+|. ++|+
T Consensus       114 L~gktvGIIG-~G~IG~~vA~~l~a-----~G~~V~~~dp~~~~~-----~~---~~---~~~~L~ell~~sDiI~lh~  175 (378)
T PRK15438        114 LHDRTVGIVG-VGNVGRRLQARLEA-----LGIKTLLCDPPRADR-----GD---EG---DFRSLDELVQEADILTFHT  175 (378)
T ss_pred             cCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCccccc-----cc---cc---ccCCHHHHHhhCCEEEEeC
Confidence            4578999999 79999999999988     799999998632111     00   01   12346777888886 4454

>PRK06487 glycerate dehydrogenase; Provisional

Probab=91.30  E-value=0.36  Score=45.17  Aligned_cols=60  Identities=15%  Similarity=0.103  Sum_probs=44.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ...+|+|.|.| .|-||+.+++.|..     -|.+|++.+|.....     ...        ..++.++++.+|. ++|+
T Consensus       145 ~l~gktvgIiG-~G~IG~~vA~~l~~-----fgm~V~~~~~~~~~~-----~~~--------~~~l~ell~~sDiv~l~l  205 (317)
T PRK06487        145 ELEGKTLGLLG-HGELGGAVARLAEA-----FGMRVLIGQLPGRPA-----RPD--------RLPLDELLPQVDALTLHC  205 (317)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhh-----CCCEEEEECCCCCcc-----ccc--------ccCHHHHHHhCCEEEECC
Confidence            35678999999 79999999999987     799999998753211     111        1247788888886 4444

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=91.29  E-value=0.35  Score=47.14  Aligned_cols=33  Identities=30%  Similarity=0.350  Sum_probs=30.0

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +|.|.| .|++|..++..|.+     .||+|+++++++.
T Consensus         2 kI~vIG-lG~~G~~lA~~La~-----~G~~V~~~d~~~~   34 (411)
T TIGR03026         2 KIAVIG-LGYVGLPLAALLAD-----LGHEVTGVDIDQE   34 (411)
T ss_pred             EEEEEC-CCchhHHHHHHHHh-----cCCeEEEEECCHH
Confidence            699998 79999999999998     8999999998754

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=91.25  E-value=0.69  Score=40.21  Aligned_cols=38  Identities=26%  Similarity=0.233  Sum_probs=31.2

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      .....++|+|.| .|-+|+.+++.|..     .|. ++++++++.
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~-----~Gv~~i~lvD~d~   55 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAG-----AGVGTIVIVDDDH   55 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEecCCE
Confidence            344557899999 79999999999998     676 699888763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=91.08  E-value=0.5  Score=44.95  Aligned_cols=63  Identities=17%  Similarity=0.007  Sum_probs=47.7

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      +|+|.|+ |.+|..++..+.+     .|++|++++.++........ -+.+.+|..|.+.+.+..+.+|.
T Consensus         1 ~igiiG~-gql~~~l~~aa~~-----lG~~v~~~d~~~~~p~~~~a-d~~~~~~~~d~~~i~~~a~~~dv   63 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARP-----LGIKVHVLDPDANSPAVQVA-DHVVLAPFFDPAAIRELAESCDV   63 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHH-----cCCEEEEECCCCCCChhHhC-ceeEeCCCCCHHHHHHHHhhCCE
Confidence            4889995 8999999999998     89999999886543211001 12457889999999888888874

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=90.99  E-value=0.27  Score=46.28  Aligned_cols=59  Identities=14%  Similarity=0.191  Sum_probs=42.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ..+++|.|.| .|.||+.+++.|..     .|++|++.+|.+....   ..++     .  ..++.++++.+|.|
T Consensus       144 l~g~~VgIIG-~G~IG~~vA~~L~~-----~G~~V~~~d~~~~~~~---~~~~-----~--~~~l~ell~~aDiV  202 (330)
T PRK12480        144 VKNMTVAIIG-TGRIGAATAKIYAG-----FGATITAYDAYPNKDL---DFLT-----Y--KDSVKEAIKDADII  202 (330)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEeCChhHhh---hhhh-----c--cCCHHHHHhcCCEE
Confidence            4567999999 79999999999988     7999999998753311   1111     1  12466788888863

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=90.91  E-value=0.22  Score=42.60  Aligned_cols=33  Identities=30%  Similarity=0.345  Sum_probs=26.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |+|-|.| .||+|..++-.|.+     .||+|++++.++
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~-----~G~~V~g~D~~~   33 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAE-----KGHQVIGVDIDE   33 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHH-----TTSEEEEE-S-H
T ss_pred             CEEEEEC-CCcchHHHHHHHHh-----CCCEEEEEeCCh
Confidence            5899998 89999999999999     899999999864

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.82  E-value=0.48  Score=43.65  Aligned_cols=35  Identities=20%  Similarity=0.229  Sum_probs=31.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   62 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~   62 (397)
                      +..+|+|+|.|.+|.+|..++..|++     .|+.|++..
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~-----~g~tVtv~~  189 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLA-----ANATVTIAH  189 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHh-----CCCEEEEEC
Confidence            34579999999999999999999998     899999885

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=90.74  E-value=0.76  Score=42.07  Aligned_cols=35  Identities=31%  Similarity=0.317  Sum_probs=28.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      .++|+|.| .|.+|+.+++.|.+     .|+.|.++.++..
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~-----~g~~v~i~g~d~~   37 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKE-----AGLVVRIIGRDRS   37 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHH-----cCCeEEEEeecCc
Confidence            45778877 99999999999999     8998877776543

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=90.61  E-value=0.4  Score=45.93  Aligned_cols=62  Identities=21%  Similarity=0.124  Sum_probs=43.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ...+++|.|.| .|.||+.+++.|..     -|++|++.++......   ...     .   ..+++++++.+|. ++|+
T Consensus       113 ~l~gktvGIIG-~G~IG~~va~~l~a-----~G~~V~~~Dp~~~~~~---~~~-----~---~~~l~ell~~aDiV~lh~  175 (381)
T PRK00257        113 DLAERTYGVVG-AGHVGGRLVRVLRG-----LGWKVLVCDPPRQEAE---GDG-----D---FVSLERILEECDVISLHT  175 (381)
T ss_pred             CcCcCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCcccccc---cCc-----c---ccCHHHHHhhCCEEEEeC
Confidence            34568999999 79999999999998     7999999986422110   111     1   1246677888886 5555

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=90.54  E-value=0.72  Score=40.94  Aligned_cols=36  Identities=28%  Similarity=0.284  Sum_probs=29.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   64 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~   64 (397)
                      ..+..+|+|.| .|-+|+++++.|..     .|. ++++++.+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~-----~Gvg~i~lvD~D   54 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAA-----AGVGKLGLVDDD   54 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence            34567999999 79999999999998     566 57777765

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=90.50  E-value=0.74  Score=42.77  Aligned_cols=67  Identities=16%  Similarity=0.190  Sum_probs=44.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC-CCCCceEEE-----ccCCCHHHHHHHHccCCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQ-----CDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~-----~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ++|.|.| +|--|++|+..|.+     +||+|+...|++...  .. ...+.+++.     .++.-..++.++++++|.|
T Consensus         2 ~kI~ViG-aGswGTALA~~la~-----ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~i   75 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLAR-----NGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADII   75 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHh-----cCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEE
Confidence            5899999 69999999999999     789999999975321  00 011222222     2233334677888888854


Q ss_pred             e
Q 015961           99 T   99 (397)
Q Consensus        99 ~   99 (397)
                      +
T Consensus        76 v   76 (329)
T COG0240          76 V   76 (329)
T ss_pred             E
Confidence            3

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=90.46  E-value=0.15  Score=44.36  Aligned_cols=36  Identities=17%  Similarity=0.338  Sum_probs=31.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      .++.++|++||+|..++.++..     .||+|.-+.|+...
T Consensus         3 ~k~~vfgg~gflg~~ic~~a~~-----sgy~vvsvsrsgas   38 (283)
T KOG4288|consen    3 PKLIVFGGNGFLGKRICQEAVT-----SGYQVVSVSRSGAS   38 (283)
T ss_pred             ccceeecccccchhhhhHHHHh-----cCceEEEeccccCC
Confidence            4678999999999999999998     79999999997644

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=90.24  E-value=0.37  Score=38.94  Aligned_cols=68  Identities=18%  Similarity=0.147  Sum_probs=45.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      ...+++++|.|| |-.|+.++..|.+     .|.+ |++++|...+.     ......++++  ++.   ++.+.+..+|
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~-----~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~~---~~~~~~~~~D   77 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAA-----LGAKEITIVNRTPERAEALAEEFGGVNIEAI--PLE---DLEEALQEAD   77 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHH-----TTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EGG---GHCHHHHTES
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHH-----cCCCEEEEEECCHHHHHHHHHHcCcccccee--eHH---HHHHHHhhCC
Confidence            345689999995 9999999999998     6766 99999975432     0011123333  332   3446677888


Q ss_pred             CeeEE
Q 015961           97 DVTHI  101 (397)
Q Consensus        97 ~V~h~  101 (397)
                      .|+++
T Consensus        78 ivI~a   82 (135)
T PF01488_consen   78 IVINA   82 (135)
T ss_dssp             EEEE-
T ss_pred             eEEEe
Confidence            77776

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=90.24  E-value=1.2  Score=38.45  Aligned_cols=36  Identities=22%  Similarity=0.326  Sum_probs=28.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~   65 (397)
                      .+..+|+|.|+.| +|+++++.|..     .|.. ++.++.+.
T Consensus        19 L~~s~VlIiG~gg-lG~evak~La~-----~GVg~i~lvD~d~   55 (197)
T cd01492          19 LRSARILLIGLKG-LGAEIAKNLVL-----SGIGSLTILDDRT   55 (197)
T ss_pred             HHhCcEEEEcCCH-HHHHHHHHHHH-----cCCCEEEEEECCc
Confidence            3457899999655 99999999998     6765 88888763

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=90.20  E-value=0.51  Score=44.10  Aligned_cols=61  Identities=15%  Similarity=0.049  Sum_probs=43.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ...+|+|.|.| .|-||+.+++.|..     -|.+|++.+|......    .     .   ...+++++++.+|. ++|+
T Consensus       144 ~l~gktvgIiG-~G~IG~~va~~l~~-----fg~~V~~~~~~~~~~~----~-----~---~~~~l~ell~~sDiv~l~~  205 (314)
T PRK06932        144 DVRGSTLGVFG-KGCLGTEVGRLAQA-----LGMKVLYAEHKGASVC----R-----E---GYTPFEEVLKQADIVTLHC  205 (314)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhc-----CCCEEEEECCCccccc----c-----c---ccCCHHHHHHhCCEEEEcC
Confidence            35679999999 79999999999987     7999999887432110    0     0   12347788888886 4454

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=90.17  E-value=0.49  Score=39.33  Aligned_cols=33  Identities=24%  Similarity=0.109  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      .+++|+|.| .|-+|...++.|++     .|++|+.++.
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~-----~ga~V~VIsp   44 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKD-----TGAFVTVVSP   44 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEcC
Confidence            468999999 59999999999998     7999998864

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=90.16  E-value=0.39  Score=46.67  Aligned_cols=63  Identities=19%  Similarity=0.106  Sum_probs=44.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ...+|+|.|.| .|-||+.+++.|..     -|.+|++.+|.+....   ..+.       ...+++++++.+|. ++|+
T Consensus       148 ~L~gktvGIiG-~G~IG~~vA~~~~~-----fGm~V~~~d~~~~~~~---~~~~-------~~~~l~ell~~sDiVslh~  211 (409)
T PRK11790        148 EVRGKTLGIVG-YGHIGTQLSVLAES-----LGMRVYFYDIEDKLPL---GNAR-------QVGSLEELLAQSDVVSLHV  211 (409)
T ss_pred             cCCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCCccccc---CCce-------ecCCHHHHHhhCCEEEEcC
Confidence            34679999999 89999999999987     7999999998532211   1111       11246778888886 4454

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=89.96  E-value=0.62  Score=43.84  Aligned_cols=38  Identities=26%  Similarity=0.328  Sum_probs=28.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ++.+|.|.||||++|..|++.|.+...  ...++..+...
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~h--P~~~l~~laS~   40 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQF--PVGELYALASE   40 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCC--CceEEEEEEcc
Confidence            346899999999999999999987311  13366666543

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=89.87  E-value=0.44  Score=44.58  Aligned_cols=34  Identities=24%  Similarity=0.305  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .++|+|.| +|-||+.++..|.+     .|++|+++.|+.
T Consensus         5 ~m~I~IiG-~GaiG~~lA~~L~~-----~g~~V~~~~r~~   38 (313)
T PRK06249          5 TPRIGIIG-TGAIGGFYGAMLAR-----AGFDVHFLLRSD   38 (313)
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEEeCC
Confidence            35899998 79999999999998     799999999975

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=89.81  E-value=0.49  Score=47.63  Aligned_cols=64  Identities=23%  Similarity=0.186  Sum_probs=44.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ..+|+|.|.| .|.||+.+++.|..     .|++|++.+|..........+++..        ++.++++.+|. ++|+
T Consensus       138 l~gktvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~~--------~l~ell~~aDiV~l~l  202 (526)
T PRK13581        138 LYGKTLGIIG-LGRIGSEVAKRAKA-----FGMKVIAYDPYISPERAAQLGVELV--------SLDELLARADFITLHT  202 (526)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCChhHHHhcCCEEE--------cHHHHHhhCCEEEEcc
Confidence            4678999999 79999999999998     8999999998532211111123221        35677888886 3443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=89.69  E-value=0.47  Score=39.03  Aligned_cols=36  Identities=25%  Similarity=0.148  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~   66 (397)
                      .+++|+|+|+ |.+|..+++.|.+     .| ++|++++|++.
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~-----~g~~~v~v~~r~~~   54 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAE-----LGAAKIVIVNRTLE   54 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEcCCHH
Confidence            3578999996 9999999999987     54 78999998753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PLN02306 hydroxypyruvate reductase

Probab=89.52  E-value=0.46  Score=45.68  Aligned_cols=37  Identities=11%  Similarity=0.049  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcc-CCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~-~~~~~~~g~~V~~l~R~~   65 (397)
                      ...+++|.|.| .|.||+.+++.|. .     -|.+|++.+|..
T Consensus       162 ~L~gktvGIiG-~G~IG~~vA~~l~~~-----fGm~V~~~d~~~  199 (386)
T PLN02306        162 LLKGQTVGVIG-AGRIGSAYARMMVEG-----FKMNLIYYDLYQ  199 (386)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhc-----CCCEEEEECCCC
Confidence            34678999999 8999999999986 5     688999999864

>TIGR00518 alaDH alanine dehydrogenase

Probab=89.48  E-value=0.41  Score=45.87  Aligned_cols=71  Identities=13%  Similarity=0.021  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      +.+|+|+|+ |-+|...++.|..     .|.+|++++|++.... .....-..+..+..+.+.+.+.+.++|.|+.++
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~-----lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~  238 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANG-----LGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAV  238 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHH-----CCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcc
Confidence            467999985 9999999999998     7889999998753210 000000123345567788888899898877664

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=89.48  E-value=0.48  Score=44.70  Aligned_cols=33  Identities=27%  Similarity=0.396  Sum_probs=25.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcE---EEEEeC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK---VYGVAR   63 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~---V~~l~R   63 (397)
                      .+|.|.||||++|..|++.|.++    ..++   +..+..
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h----~~f~v~~l~~~aS   41 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKE----TKFNIAEVTLLSS   41 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHC----CCCCcccEEEEEC
Confidence            58999999999999999999854    3444   555554

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=89.46  E-value=0.55  Score=43.15  Aligned_cols=73  Identities=14%  Similarity=0.059  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      .+++|-|+|+.| +|+--++.-..     -|++|++++++..+.  ....-+.+.+..-..|++.++++....|.++|.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKA-----MG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v  254 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKA-----MGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTV  254 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHH-----hCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceee
Confidence            468999999999 99887777766     899999999986321  1111244444444447777777777777788875


Q ss_pred             E
Q 015961          103 Y  103 (397)
Q Consensus       103 ~  103 (397)
                      .
T Consensus       255 ~  255 (360)
T KOG0023|consen  255 S  255 (360)
T ss_pred             e
Confidence            4

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=89.44  E-value=0.22  Score=48.63  Aligned_cols=67  Identities=19%  Similarity=0.092  Sum_probs=44.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ..+++|+|.|+ |-+|..+++.|..     .| .+|++++|+....  ....-+...     .+.+++.+.+.++|.|+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~-----~G~~~V~v~~rs~~ra~~la~~~g~~~-----i~~~~l~~~l~~aDvVi~  246 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLR-----KGVGKILIANRTYERAEDLAKELGGEA-----VKFEDLEEYLAEADIVIS  246 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHcCCeE-----eeHHHHHHHHhhCCEEEE
Confidence            44589999995 9999999999988     67 6799999975432  100001111     123456677788886666


Q ss_pred             E
Q 015961          101 I  101 (397)
Q Consensus       101 ~  101 (397)
                      +
T Consensus       247 a  247 (417)
T TIGR01035       247 S  247 (417)
T ss_pred             C
Confidence            5

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=89.44  E-value=0.47  Score=44.95  Aligned_cols=75  Identities=16%  Similarity=0.054  Sum_probs=43.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc----cCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTD   97 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~----~~~~   97 (397)
                      -..+++|||.||+|-+|+..++.+..     .+ ..|++..+.....+...-+. -...|..+++-.+...+    ++|.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~-----~~~~~v~t~~s~e~~~l~k~lGA-d~vvdy~~~~~~e~~kk~~~~~~Dv  228 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKH-----AGAIKVVTACSKEKLELVKKLGA-DEVVDYKDENVVELIKKYTGKGVDV  228 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHh-----cCCcEEEEEcccchHHHHHHcCC-cEeecCCCHHHHHHHHhhcCCCccE
Confidence            34567999999999999999988877     56 34444443322211110111 12466667544433333    3666


Q ss_pred             eeEEEE
Q 015961           98 VTHIFY  103 (397)
Q Consensus        98 V~h~a~  103 (397)
                      |+++++
T Consensus       229 VlD~vg  234 (347)
T KOG1198|consen  229 VLDCVG  234 (347)
T ss_pred             EEECCC
Confidence            777654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=89.37  E-value=0.98  Score=36.67  Aligned_cols=53  Identities=26%  Similarity=0.273  Sum_probs=41.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+|+|+|.|.+.-+|..|+..|.+     +|..|+...++..                    ++++.++.+|.|+-.
T Consensus        26 ~~gk~v~VvGrs~~vG~pla~lL~~-----~gatV~~~~~~t~--------------------~l~~~v~~ADIVvsA   78 (140)
T cd05212          26 LDGKKVLVVGRSGIVGAPLQCLLQR-----DGATVYSCDWKTI--------------------QLQSKVHDADVVVVG   78 (140)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEeCCCCc--------------------CHHHHHhhCCEEEEe
Confidence            3568999999999999999999998     7889988876431                    245667888865554

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=89.29  E-value=1.3  Score=38.00  Aligned_cols=76  Identities=24%  Similarity=0.211  Sum_probs=47.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCC-HHHHHHHHccCCCeeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD-PEETQAKLSQLTDVTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~~~V~h~  101 (397)
                      +..+|+|+|.|.+..+|.-|+..|++     +|..|+..+.+...................| ...+.+.++.+|.|+-.
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~-----~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsA  133 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLAN-----DGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITG  133 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHH-----CCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEc
Confidence            34579999999999999999999998     7889998864321110000000001111112 22366778888876665


Q ss_pred             EE
Q 015961          102 FY  103 (397)
Q Consensus       102 a~  103 (397)
                      ++
T Consensus       134 vG  135 (197)
T cd01079         134 VP  135 (197)
T ss_pred             cC
Confidence            43

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK06444 prephenate dehydrogenase; Provisional

Probab=89.27  E-value=0.42  Score=41.28  Aligned_cols=28  Identities=32%  Similarity=0.520  Sum_probs=25.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVY   59 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~   59 (397)
                      ++|.|.||+|-+|+.+++.|.+     .|+.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~-----~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDD-----NGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHh-----CCCEEE
Confidence            3799999999999999999998     799986

>PLN03139 formate dehydrogenase; Provisional

Probab=89.26  E-value=0.41  Score=45.96  Aligned_cols=64  Identities=17%  Similarity=0.049  Sum_probs=43.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ...+|+|.|.| .|-||+.+++.|..     -|.+|++.+|..... .....++.       -.+++.++++.+|.|+
T Consensus       196 ~L~gktVGIVG-~G~IG~~vA~~L~a-----fG~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~sDvV~  260 (386)
T PLN03139        196 DLEGKTVGTVG-AGRIGRLLLQRLKP-----FNCNLLYHDRLKMDPELEKETGAK-------FEEDLDAMLPKCDVVV  260 (386)
T ss_pred             CCCCCEEEEEe-ecHHHHHHHHHHHH-----CCCEEEEECCCCcchhhHhhcCce-------ecCCHHHHHhhCCEEE
Confidence            45678999999 79999999999987     799999998864221 10001111       1124667788888633

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=89.22  E-value=0.71  Score=43.33  Aligned_cols=65  Identities=18%  Similarity=0.092  Sum_probs=44.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcc-CCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTH  100 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~-~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h  100 (397)
                      ...+|++.|.| .|-||+.+++.|. .     -|.+|++.+|..........++++        .++.++++.+|. ++|
T Consensus       142 ~L~gktvGIiG-~G~IG~~va~~l~~~-----fgm~V~~~~~~~~~~~~~~~~~~~--------~~l~ell~~sDvv~lh  207 (323)
T PRK15409        142 DVHHKTLGIVG-MGRIGMALAQRAHFG-----FNMPILYNARRHHKEAEERFNARY--------CDLDTLLQESDFVCII  207 (323)
T ss_pred             CCCCCEEEEEc-ccHHHHHHHHHHHhc-----CCCEEEEECCCCchhhHHhcCcEe--------cCHHHHHHhCCEEEEe
Confidence            35679999999 7999999999997 6     688999888764221100112221        236678888986 445


Q ss_pred             E
Q 015961          101 I  101 (397)
Q Consensus       101 ~  101 (397)
                      +
T Consensus       208 ~  208 (323)
T PRK15409        208 L  208 (323)
T ss_pred             C
Confidence            4

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=89.16  E-value=0.23  Score=48.60  Aligned_cols=69  Identities=16%  Similarity=0.095  Sum_probs=45.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+++|+|.| +|-+|..+++.|..     .|. +|++++|++.........+   .++..+.+++.+.+.++|.|+.+
T Consensus       180 ~~~~~vlViG-aG~iG~~~a~~L~~-----~G~~~V~v~~r~~~ra~~la~~~---g~~~~~~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIG-AGEMGELVAKHLAE-----KGVRKITVANRTLERAEELAEEF---GGEAIPLDELPEALAEADIVISS  249 (423)
T ss_pred             ccCCEEEEEC-chHHHHHHHHHHHH-----CCCCeEEEEeCCHHHHHHHHHHc---CCcEeeHHHHHHHhccCCEEEEC
Confidence            4558999999 59999999999987     676 6999999754321000000   11223335566777888866665

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=89.13  E-value=1.1  Score=40.87  Aligned_cols=70  Identities=17%  Similarity=0.147  Sum_probs=50.6

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      +..+...||++.| +|-+|+.++-++.+     -|.+|++++|-....--. -.-.-...|.+|.+.+...++...+
T Consensus         7 ~~~~~a~kvmLLG-SGELGKEvaIe~QR-----LG~eViAVDrY~~APAmq-VAhrs~Vi~MlD~~al~avv~rekP   76 (394)
T COG0027           7 PLRPQATKVMLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQ-VAHRSYVIDMLDGDALRAVVEREKP   76 (394)
T ss_pred             CCCCCCeEEEEec-CCccchHHHHHHHh-----cCCEEEEecCcCCChhhh-hhhheeeeeccCHHHHHHHHHhhCC
Confidence            3333446799999 89999999999998     799999999965431000 0012457899999999888876544

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=89.11  E-value=0.44  Score=46.48  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=31.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|.|.| .|++|..++..|.+     .||+|+++++++.
T Consensus         4 ~kI~VIG-lG~~G~~~A~~La~-----~G~~V~~~D~~~~   37 (415)
T PRK11064          4 ETISVIG-LGYIGLPTAAAFAS-----RQKQVIGVDINQH   37 (415)
T ss_pred             cEEEEEC-cchhhHHHHHHHHh-----CCCEEEEEeCCHH
Confidence            6899999 79999999999998     8999999999764

>PRK08328 hypothetical protein; Provisional

Probab=89.10  E-value=2.6  Score=37.44  Aligned_cols=37  Identities=16%  Similarity=0.268  Sum_probs=29.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      ...+.+|+|.| .|-+|+.+++.|..     .|. ++++++.+.
T Consensus        24 ~L~~~~VlIiG-~GGlGs~ia~~La~-----~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVG-VGGLGSPVAYYLAA-----AGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCCc
Confidence            33457899999 69999999999998     565 488887653

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=89.01  E-value=0.52  Score=47.45  Aligned_cols=66  Identities=18%  Similarity=0.175  Sum_probs=44.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ...+|+|.|.| .|.||+.+++.|..     .|++|++.+|..........+++.  .     ++++++++.+|. ++|+
T Consensus       135 ~l~gktvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~--~-----~~l~ell~~aDvV~l~l  201 (525)
T TIGR01327       135 ELYGKTLGVIG-LGRIGSIVAKRAKA-----FGMKVLAYDPYISPERAEQLGVEL--V-----DDLDELLARADFITVHT  201 (525)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCChhHHHhcCCEE--c-----CCHHHHHhhCCEEEEcc
Confidence            34678999999 79999999999988     799999999853221100112211  1     236677888886 4444

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=88.97  E-value=0.91  Score=40.06  Aligned_cols=68  Identities=19%  Similarity=0.214  Sum_probs=41.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCH--HHHHHHHccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDP--EETQAKLSQLTD   97 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~--~~l~~~~~~~~~   97 (397)
                      ....+|+|.| -|-+|++.++.|.+     .|. ++++++-+.-..-.....+....+|+..+  +.+++.+..+.+
T Consensus        28 l~~~~V~VvG-iGGVGSw~veALaR-----sGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP   98 (263)
T COG1179          28 LKQAHVCVVG-IGGVGSWAVEALAR-----SGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINP   98 (263)
T ss_pred             HhhCcEEEEe-cCchhHHHHHHHHH-----cCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCC
Confidence            3456899999 68899999999998     666 47777765321111112344445555544  334555555444

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=88.90  E-value=0.58  Score=42.96  Aligned_cols=37  Identities=19%  Similarity=0.014  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK   66 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~   66 (397)
                      ..+++++|+|+ |-+|+.++..|..     .| .+|++++|+..
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~-----~g~~~V~v~~R~~~  158 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLD-----LGVAEITIVNRTVE  158 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHH-----cCCCEEEEEeCCHH
Confidence            45578999995 9999999999997     67 68999999753

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=88.88  E-value=0.76  Score=44.61  Aligned_cols=36  Identities=22%  Similarity=0.341  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      .|+|.|.|+||.||+..++-+.+.+   ..++|++++=.
T Consensus        57 ~KkI~ILGSTGSIGtqtLdVI~~~p---d~f~vvaLaag   92 (454)
T PLN02696         57 PKPISLLGSTGSIGTQTLDIVAENP---DKFKVVALAAG   92 (454)
T ss_pred             ccEEEEecCCcHhhHHHHHHHHhCc---cccEEEEEECC
Confidence            3799999999999999999887643   46889888754

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=88.88  E-value=0.49  Score=44.87  Aligned_cols=35  Identities=20%  Similarity=0.381  Sum_probs=29.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      |+|.|.|+||.||+..++-+.+.+   ..++|++++=.
T Consensus         2 k~i~IlGsTGSIG~qtL~Vi~~~~---~~f~v~~Laa~   36 (389)
T TIGR00243         2 KQIVILGSTGSIGKSTLDVVRHNP---DHFQVVALSAG   36 (389)
T ss_pred             ceEEEEecChHHHHHHHHHHHhCc---cccEEEEEEcC
Confidence            789999999999999988876543   46899999854

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=88.85  E-value=0.62  Score=43.28  Aligned_cols=22  Identities=36%  Similarity=0.517  Sum_probs=20.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPL   48 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~   48 (397)
                      ++|.|.||||.+|+.+++.|.+
T Consensus         2 ~~VavvGATG~VG~~~~~~L~e   23 (334)
T COG0136           2 LNVAVLGATGAVGQVLLELLEE   23 (334)
T ss_pred             cEEEEEeccchHHHHHHHHHHh
Confidence            5899999999999999999987

>PLN02735 carbamoyl-phosphate synthase

Probab=88.84  E-value=1.2  Score=48.89  Aligned_cols=70  Identities=14%  Similarity=0.187  Sum_probs=43.9

Q ss_pred             CccCCCCCEEEEEcCCCh-h---------HHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHH
Q 015961           20 EPARSYQSVALIVGVTGI-V---------GNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ   89 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGf-i---------G~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~   89 (397)
                      +|.....|||||+|+... |         |..+++.|.+     .|++|++++.++........-...+..+..+.+.+.
T Consensus        17 ~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke-----~G~~Vi~vd~np~t~~~~~~~aD~~yi~p~~~e~v~   91 (1102)
T PLN02735         17 AGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKE-----EGYEVVLINSNPATIMTDPETADRTYIAPMTPELVE   91 (1102)
T ss_pred             CCcccCCCEEEEECCCccccccceeecchHHHHHHHHHH-----cCCEEEEEeCCcccccCChhhCcEEEeCCCCHHHHH
Confidence            455555689999995431 2         8889999999     899999999876321100011112233445667676


Q ss_pred             HHHcc
Q 015961           90 AKLSQ   94 (397)
Q Consensus        90 ~~~~~   94 (397)
                      +.++.
T Consensus        92 ~ii~~   96 (1102)
T PLN02735         92 QVIAK   96 (1102)
T ss_pred             HHHHH
Confidence            65554

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=88.73  E-value=0.48  Score=39.60  Aligned_cols=34  Identities=24%  Similarity=0.339  Sum_probs=29.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|-+.| .|-+|+.+++.|++     .||+|++.+|++.
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~-----~g~~v~~~d~~~~   35 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAK-----AGYEVTVYDRSPE   35 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHH-----TTTEEEEEESSHH
T ss_pred             CEEEEEc-hHHHHHHHHHHHHh-----cCCeEEeeccchh
Confidence            6899999 79999999999998     8999999999753

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=88.73  E-value=0.89  Score=34.73  Aligned_cols=35  Identities=26%  Similarity=0.159  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++|||+|| |-+|.+-++.|++     .|.+|+.++...
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~-----~gA~v~vis~~~   40 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLE-----AGAKVTVISPEI   40 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCC-----CTBEEEEEESSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEECCch
Confidence            4689999995 9999999999999     799999999874

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=88.59  E-value=0.58  Score=43.67  Aligned_cols=37  Identities=24%  Similarity=0.284  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..+.+|||+||+|.+|..+++.+..     .|.+|+++++++
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~-----~g~~v~~~~~~~  197 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKA-----LGARVIAVTRSP  197 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----cCCeEEEEeCCH
Confidence            3457899999999999999999988     799999998865

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=88.58  E-value=0.62  Score=40.49  Aligned_cols=35  Identities=20%  Similarity=0.060  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++|||.|| |-+|...++.|++     .|++|+++++..
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~-----~ga~V~VIs~~~   43 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLK-----YGAHIVVISPEL   43 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCeEEEEcCCC
Confidence            4689999995 9999999999998     789999998653

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=88.57  E-value=0.49  Score=43.82  Aligned_cols=36  Identities=19%  Similarity=0.340  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      |.++|.|.| .|.+|..+++.|.+     .|++|++.+|++.
T Consensus         1 ~~~~IgviG-~G~mG~~~a~~l~~-----~g~~v~~~d~~~~   36 (296)
T PRK11559          1 MTMKVGFIG-LGIMGKPMSKNLLK-----AGYSLVVYDRNPE   36 (296)
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHH-----CCCeEEEEcCCHH
Confidence            446899999 79999999999998     7999999998753

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=88.41  E-value=0.28  Score=45.86  Aligned_cols=68  Identities=16%  Similarity=0.099  Sum_probs=44.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+++|+|.|+ |-+|..+++.|...    .+.+|++++|++...  ....-+.     +..+.+++.+.+..+|.|+.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~----g~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVi~a  245 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAK----GVAEITIANRTYERAEELAKELGG-----NAVPLDELLELLNEADVVISA  245 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHc----CCCEEEEEeCCHHHHHHHHHHcCC-----eEEeHHHHHHHHhcCCEEEEC
Confidence            34679999995 99999999999862    346799999976432  1000011     222334566777778766655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08605 D-lactate dehydrogenase; Validated

Probab=88.32  E-value=0.6  Score=44.03  Aligned_cols=62  Identities=19%  Similarity=0.180  Sum_probs=41.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ..+++|.|.| .|.||+.+++.|.+.    .|++|++.+|.......  ..+     ..  ..++.++++.+|.|+
T Consensus       144 l~g~~VgIIG-~G~IG~~vA~~L~~~----~g~~V~~~d~~~~~~~~--~~~-----~~--~~~l~ell~~aDvIv  205 (332)
T PRK08605        144 IKDLKVAVIG-TGRIGLAVAKIFAKG----YGSDVVAYDPFPNAKAA--TYV-----DY--KDTIEEAVEGADIVT  205 (332)
T ss_pred             eCCCEEEEEC-CCHHHHHHHHHHHhc----CCCEEEEECCCccHhHH--hhc-----cc--cCCHHHHHHhCCEEE
Confidence            4568999999 799999999999431    58899998876433210  111     11  124667788888644

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=88.28  E-value=0.55  Score=35.11  Aligned_cols=33  Identities=33%  Similarity=0.399  Sum_probs=27.6

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCC---cEEEEE-eCCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGV-ARRPK   66 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g---~~V~~l-~R~~~   66 (397)
                      ||.|.| +|.+|+.|++.|++     .|   ++|+.. +|++.
T Consensus         1 kI~iIG-~G~mg~al~~~l~~-----~g~~~~~v~~~~~r~~~   37 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLA-----SGIKPHEVIIVSSRSPE   37 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHH-----TTS-GGEEEEEEESSHH
T ss_pred             CEEEEC-CCHHHHHHHHHHHH-----CCCCceeEEeeccCcHH
Confidence            577886 89999999999998     67   899855 77764

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=88.18  E-value=1.7  Score=40.79  Aligned_cols=66  Identities=17%  Similarity=0.102  Sum_probs=50.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ++|.|.| .|.+|+=++..-..     -|++|+.++-.+...-.. -.-..+..+..|++++.++...||.|.
T Consensus         2 ~tvgIlG-GGQLgrMm~~aa~~-----lG~~v~vLdp~~~~PA~~-va~~~i~~~~dD~~al~ela~~~DViT   67 (375)
T COG0026           2 KTVGILG-GGQLGRMMALAAAR-----LGIKVIVLDPDADAPAAQ-VADRVIVAAYDDPEALRELAAKCDVIT   67 (375)
T ss_pred             CeEEEEc-CcHHHHHHHHHHHh-----cCCEEEEecCCCCCchhh-cccceeecCCCCHHHHHHHHhhCCEEE
Confidence            6899999 59999999988887     799999999765432100 012467788889999999999998643

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=88.09  E-value=2.4  Score=38.09  Aligned_cols=34  Identities=21%  Similarity=0.209  Sum_probs=28.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   64 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~   64 (397)
                      ..++|+|.|+ |-+|+.+++.|..     .|. ++++++.+
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~-----~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAA-----AGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence            4579999996 9999999999998     565 58888765

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=87.96  E-value=7  Score=32.31  Aligned_cols=34  Identities=15%  Similarity=0.297  Sum_probs=30.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+|+|-||-|-+|++.++.+..     ++|-|.-++-..
T Consensus         4 grVivYGGkGALGSacv~~Fka-----nnywV~siDl~e   37 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKA-----NNYWVLSIDLSE   37 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHh-----cCeEEEEEeecc
Confidence            5899999999999999999998     799888887654

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.96  E-value=0.92  Score=41.45  Aligned_cols=55  Identities=16%  Similarity=0.103  Sum_probs=41.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~  103 (397)
                      ..+|+|.|.|.+|.+|..++..|++     +|+.|++...+.       .             ++.+..+.+|.|+-+.+
T Consensus       156 l~Gk~v~vIG~S~ivG~Pla~lL~~-----~gatVtv~~s~t-------~-------------~l~~~~~~ADIVI~avg  210 (284)
T PRK14179        156 LEGKHAVVIGRSNIVGKPMAQLLLD-----KNATVTLTHSRT-------R-------------NLAEVARKADILVVAIG  210 (284)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHH-----CCCEEEEECCCC-------C-------------CHHHHHhhCCEEEEecC
Confidence            4579999999999999999999998     799998872111       0             24566788887666543

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=87.88  E-value=1.3  Score=36.78  Aligned_cols=53  Identities=21%  Similarity=0.128  Sum_probs=37.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+|+|+|.|.++.+|..|+..|.+     +|..|+......                    .++++..+.+|.|+-.
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~-----~~atVt~~h~~T--------------------~~l~~~~~~ADIVVsa   86 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLN-----KGATVTICHSKT--------------------KNLQEITRRADIVVSA   86 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHH-----TT-EEEEE-TTS--------------------SSHHHHHTTSSEEEE-
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHh-----CCCeEEeccCCC--------------------CcccceeeeccEEeee
Confidence            4578999999999999999999998     788888766542                    1245667777765554

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=87.68  E-value=0.58  Score=46.10  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +++|+|||++| +|...++.|++     .|++|++.++..
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~-----~G~~V~~~d~~~   38 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHK-----LGANVTVNDGKP   38 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHH-----CCCEEEEEcCCC
Confidence            57899999987 99999999998     899999998764

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=87.65  E-value=0.89  Score=39.62  Aligned_cols=53  Identities=15%  Similarity=0.108  Sum_probs=40.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVS   83 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~   83 (397)
                      .+++|||.| .|-+|..-++.|++     .|.+|++++......   +....+++++..+..
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~-----~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~   63 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLK-----AGAQLRVIAEELESELTLLAEQGGITWLARCFD   63 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHH-----CCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCC
Confidence            467999999 59999999999999     799999998754322   112247888888875

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02775 Probable dihydrodipicolinate reductase

Probab=87.62  E-value=9  Score=35.07  Aligned_cols=41  Identities=17%  Similarity=0.208  Sum_probs=32.3

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEE-EeCCC
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRP   65 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~-l~R~~   65 (397)
                      .+++.+..+|+|.|++|-+|+.+++.+.+     .+.++++ +++.+
T Consensus         5 ~~~~~~~i~V~V~Ga~G~MG~~~~~av~~-----~~~~Lv~~~~~~~   46 (286)
T PLN02775          5 ASPPGSAIPIMVNGCTGKMGHAVAEAAVS-----AGLQLVPVSFTGP   46 (286)
T ss_pred             CCCcCCCCeEEEECCCChHHHHHHHHHhc-----CCCEEEEEecccc
Confidence            34556667999999999999999999998     6788555 44443

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=87.57  E-value=3  Score=36.49  Aligned_cols=35  Identities=20%  Similarity=0.106  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~   65 (397)
                      ...+|+|.| .|-+|+.+++.|.+     .|.. +++++.+.
T Consensus        27 ~~~~V~ViG-~GglGs~ia~~La~-----~Gvg~i~lvD~D~   62 (212)
T PRK08644         27 KKAKVGIAG-AGGLGSNIAVALAR-----SGVGNLKLVDFDV   62 (212)
T ss_pred             hCCCEEEEC-cCHHHHHHHHHHHH-----cCCCeEEEEeCCE
Confidence            457899999 69999999999998     6664 88888863

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=87.55  E-value=2  Score=40.92  Aligned_cols=37  Identities=11%  Similarity=0.156  Sum_probs=30.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      ..+..+|+|.| .|-+|+.+++.|..     .|. ++++++.+.
T Consensus        25 ~L~~~~VlivG-~GGlGs~~a~~La~-----~Gvg~i~lvD~D~   62 (355)
T PRK05597         25 SLFDAKVAVIG-AGGLGSPALLYLAG-----AGVGHITIIDDDT   62 (355)
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEEeCCE
Confidence            34557999999 59999999999998     676 488888764

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=87.44  E-value=1.4  Score=42.59  Aligned_cols=55  Identities=18%  Similarity=0.212  Sum_probs=37.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCCCCCCCCceEEEccCCCHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPNWNADHLVEYVQCDVSDPE   86 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~   86 (397)
                      +.+|||.| +|-||..|++-|+.     .|++ |++++-+.-........+=|.+-|+..+.
T Consensus        12 ~~riLvVG-aGGIGCELLKnLal-----~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsK   67 (603)
T KOG2013|consen   12 SGRILVVG-AGGIGCELLKNLAL-----TGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSK   67 (603)
T ss_pred             cCeEEEEe-cCcccHHHHHHHHH-----hcCCeeEEEeccceeccchhhhheeehhhcCchH
Confidence            46899999 58899999999987     6765 88888765332111123345566676654

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=87.35  E-value=0.66  Score=39.53  Aligned_cols=33  Identities=21%  Similarity=0.469  Sum_probs=28.2

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +|.|.|| |.+|+.++..++.     .|++|+.+++++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~-----~G~~V~l~d~~~~   33 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFAR-----AGYEVTLYDRSPE   33 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHH-----TTSEEEEE-SSHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHh-----CCCcEEEEECChH
Confidence            6899995 9999999999998     8999999999753

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=87.33  E-value=3.8  Score=33.21  Aligned_cols=32  Identities=25%  Similarity=0.236  Sum_probs=27.1

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      +|+|.| .|-+|+.+++.|..     .|. ++++++.+.
T Consensus         1 ~VliiG-~GglGs~ia~~L~~-----~Gv~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLAR-----SGVGKITLIDFDT   33 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEEcCCC
Confidence            589999 59999999999998     677 588888763

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=87.32  E-value=0.73  Score=44.76  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=30.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+|+|.| +|++|..++.+|.+     .|++|+++.|..
T Consensus         2 ~~vvIIG-aG~~G~~~A~~La~-----~g~~V~vle~~~   34 (410)
T PRK12409          2 SHIAVIG-AGITGVTTAYALAQ-----RGYQVTVFDRHR   34 (410)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEeCCC
Confidence            4899999 59999999999998     799999999975

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=87.21  E-value=0.87  Score=35.86  Aligned_cols=30  Identities=33%  Similarity=0.491  Sum_probs=25.8

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV   61 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l   61 (397)
                      +|.|+|++|.+|..+++.|.+.    .+++|+++
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~----~~~~l~av   30 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEH----PDFEVVAL   30 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcC----CCceEEEE
Confidence            5889999999999999999874    47787777

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=87.17  E-value=0.44  Score=44.19  Aligned_cols=33  Identities=15%  Similarity=0.224  Sum_probs=29.9

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +|.|.| .|.+|+.+++.|.+     .|++|++.+|++.
T Consensus         2 ~Ig~IG-lG~mG~~la~~L~~-----~g~~V~~~dr~~~   34 (298)
T TIGR00872         2 QLGLIG-LGRMGANIVRRLAK-----RGHDCVGYDHDQD   34 (298)
T ss_pred             EEEEEc-chHHHHHHHHHHHH-----CCCEEEEEECCHH
Confidence            699999 79999999999998     7999999999764

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=86.90  E-value=0.82  Score=43.58  Aligned_cols=33  Identities=18%  Similarity=0.382  Sum_probs=28.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   62 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~   62 (397)
                      |+|.|.|+||.||...++.+.+.+   +.++|++++
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p---~~f~VvaLa   34 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNP---DRFRVVALS   34 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCc---cccEEEEEE
Confidence            789999999999999998887643   478999997

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=86.82  E-value=0.71  Score=42.00  Aligned_cols=36  Identities=11%  Similarity=0.076  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCC---cEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g---~~V~~l~R~~~   66 (397)
                      |+++|.|.| +|.+|+.++..|.+     .|   ++|++++|++.
T Consensus         1 ~mm~I~iIG-~G~mG~~la~~l~~-----~g~~~~~v~v~~r~~~   39 (267)
T PRK11880          1 MMKKIGFIG-GGNMASAIIGGLLA-----SGVPAKDIIVSDPSPE   39 (267)
T ss_pred             CCCEEEEEe-chHHHHHHHHHHHh-----CCCCcceEEEEcCCHH
Confidence            456899999 69999999999987     56   67999999753

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.82  E-value=1.4  Score=40.29  Aligned_cols=54  Identities=20%  Similarity=0.183  Sum_probs=40.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ..+++|+|.|.++.+|+.|+..|.+     +|..|+...+..                    .++.+.++.+|.|+-.+
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~-----~~atVt~~hs~t--------------------~~l~~~~~~ADIVV~av  209 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQ-----AGATVTICHSKT--------------------RDLAAHTRQADIVVAAV  209 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEecCCC--------------------CCHHHHhhhCCEEEEcC
Confidence            3568999999999999999999998     788998764321                    12456677788665553

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=86.74  E-value=1.3  Score=32.52  Aligned_cols=35  Identities=29%  Similarity=0.378  Sum_probs=28.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      ...++++|.|+ |.+|..++..|.+.    .+.+|++.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~----~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADE----GGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHc----CCCEEEEEcC
Confidence            45579999996 99999999999982    2567888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=86.71  E-value=0.79  Score=42.48  Aligned_cols=33  Identities=30%  Similarity=0.359  Sum_probs=29.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ++|+|.| +|-+|+.++..|.+     .|++|++++|++
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~-----~g~~V~~~~r~~   33 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQ-----AGHDVTLVARRG   33 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEEECCh
Confidence            3799999 59999999999998     799999999954

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=86.64  E-value=0.9  Score=42.80  Aligned_cols=39  Identities=18%  Similarity=0.256  Sum_probs=32.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+.+|||+||+|-+|..+++.+..     .|.+|+++++++.
T Consensus       149 ~~~g~~VlI~Ga~G~vG~~aiqlAk~-----~G~~Vi~~~~~~~  187 (338)
T cd08295         149 PKKGETVFVSAASGAVGQLVGQLAKL-----KGCYVVGSAGSDE  187 (338)
T ss_pred             CCCCCEEEEecCccHHHHHHHHHHHH-----cCCEEEEEeCCHH
Confidence            34568999999999999999988777     7899999887653

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK08818 prephenate dehydrogenase; Provisional

Probab=86.64  E-value=0.86  Score=43.49  Aligned_cols=35  Identities=34%  Similarity=0.336  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ..+|.|.|.+|.||..+++.|.+.    .+++|+++++.
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~----~~~~V~g~D~~   38 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTR----MQLEVIGHDPA   38 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhc----CCCEEEEEcCC
Confidence            368999999999999999999862    37899999874

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=86.57  E-value=0.76  Score=38.15  Aligned_cols=32  Identities=25%  Similarity=0.280  Sum_probs=29.5

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ||.|.| +|..|++++..|.+     +|++|+...|++
T Consensus         1 KI~ViG-aG~~G~AlA~~la~-----~g~~V~l~~~~~   32 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLAD-----NGHEVTLWGRDE   32 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHH-----CTEEEEEETSCH
T ss_pred             CEEEEC-cCHHHHHHHHHHHH-----cCCEEEEEeccH
Confidence            689999 69999999999998     899999999974

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=86.51  E-value=0.68  Score=42.68  Aligned_cols=34  Identities=18%  Similarity=0.424  Sum_probs=30.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|.|.| .|.+|..++..|++     .|++|+++++++.
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~-----~G~~V~~~d~~~~   35 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAV-----SGFQTTLVDIKQE   35 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHh-----CCCcEEEEeCCHH
Confidence            5799999 59999999999998     7999999999753

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=86.38  E-value=5.5  Score=35.62  Aligned_cols=35  Identities=23%  Similarity=0.185  Sum_probs=28.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      ...+|+|.| .|-+|+.++..|..     .|. ++++++++.
T Consensus        23 ~~~~VlvvG-~GglGs~va~~La~-----~Gvg~i~lvD~D~   58 (240)
T TIGR02355        23 KASRVLIVG-LGGLGCAASQYLAA-----AGVGNLTLLDFDT   58 (240)
T ss_pred             hCCcEEEEC-cCHHHHHHHHHHHH-----cCCCEEEEEeCCc
Confidence            346899999 69999999999998     565 588888764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK06545 prephenate dehydrogenase; Validated

Probab=86.16  E-value=0.55  Score=44.85  Aligned_cols=34  Identities=32%  Similarity=0.488  Sum_probs=29.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|.|.| +|.+|..++..|.+     .|++|.+.++++.
T Consensus         1 ~~I~iIG-~GliG~siA~~L~~-----~G~~v~i~~~~~~   34 (359)
T PRK06545          1 RTVLIVG-LGLIGGSLALAIKA-----AGPDVFIIGYDPS   34 (359)
T ss_pred             CeEEEEE-eCHHHHHHHHHHHh-----cCCCeEEEEeCCC
Confidence            4689998 79999999999998     7888888887654

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=86.12  E-value=1.1  Score=39.37  Aligned_cols=36  Identities=28%  Similarity=0.181  Sum_probs=30.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      +.++++|+|.| -|.+|+++++.|.+     .|.+|++++-.
T Consensus        20 ~l~g~~vaIqG-fGnVG~~~a~~L~~-----~G~~vV~vsD~   55 (217)
T cd05211          20 SLEGLTVAVQG-LGNVGWGLAKKLAE-----EGGKVLAVSDP   55 (217)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEEcC
Confidence            45678999999 79999999999998     78888777754

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PLN00203 glutamyl-tRNA reductase

Probab=86.07  E-value=0.39  Score=48.03  Aligned_cols=69  Identities=20%  Similarity=0.128  Sum_probs=44.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC--CC-CCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ..+++|+|.|+ |-+|..+++.|..     .|. +|++++|.....  .. ..+++...   ....+++.+++.++|.|+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~-----~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVI  334 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVS-----KGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVF  334 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHh-----CCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEE
Confidence            34579999996 9999999999997     676 699999975432  10 00122211   122344566778888666


Q ss_pred             EE
Q 015961          100 HI  101 (397)
Q Consensus       100 h~  101 (397)
                      .+
T Consensus       335 sA  336 (519)
T PLN00203        335 TS  336 (519)
T ss_pred             Ec
Confidence            54

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=86.07  E-value=0.87  Score=41.77  Aligned_cols=33  Identities=42%  Similarity=0.516  Sum_probs=29.8

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +|.|.| .|.+|..++..|.+     .|++|++.+|++.
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~-----~g~~V~~~d~~~~   34 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRS-----LGHTVYGVSRRES   34 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHH-----CCCEEEEEECCHH
Confidence            699999 89999999999998     7999999998753

>PLN02712 arogenate dehydrogenase

Probab=86.03  E-value=1.1  Score=46.49  Aligned_cols=52  Identities=25%  Similarity=0.265  Sum_probs=39.7

Q ss_pred             ccccccccccCccCcc-----CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961            7 GAIGAARKKFEEDEPA-----RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus         7 ~~~~~~~~~~~~~~~~-----~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ++++++|+ |+-+.+.     ..++++|.|.| .|.+|..+++.|.+     .|++|++.+|+.
T Consensus       346 ~~~~~~~~-~~~~~~~~~~~~~~~~~kIgIIG-lG~mG~slA~~L~~-----~G~~V~~~dr~~  402 (667)
T PLN02712        346 RFQGVAQK-YEYNAQVSGCVNDGSKLKIAIVG-FGNFGQFLAKTMVK-----QGHTVLAYSRSD  402 (667)
T ss_pred             hhhcccCC-CCccchhhhccCCCCCCEEEEEe-cCHHHHHHHHHHHH-----CcCEEEEEECCh
Confidence            55677774 4333332     22557999999 89999999999998     789999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	397
2v6f_A	364	Structure Of Progesterone 5beta-Reductase From Digi		1e-158

>pdb|2V6F|A Chain A, Structure Of Progesterone 5beta-Reductase From Digitalis Lanata Length = 364

Iteration: 1
 Score =  553 bits (1424), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 264/372 (70%), Positives = 299/372 (80%), Gaps = 8/372 (2%)
Query: 26  QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP 85
            SVALIVGVTGI+GNSLAEILPL DTPGGPWKVYGVARR +P W+ D+ + YVQCD+SDP
Sbjct: 1   SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDP 60
Query: 86  EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145
           +++QAKLS LTDVTH+FYVTW NRSTE ENC+ N  MFRNVL AVIPN PNL+H+ LQTG
Sbjct: 61  DDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 120
Query: 146 TKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDT 205
            KHY+GPFE++GKI+ +DPP+TED+PRL   NFYY LEDI+ EEVEKKE L+WSVHRP  
Sbjct: 121 RKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGN 180
Query: 206 IFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 265
           IFGFSPYS+MNLVG LCVYAA+CKHEG  LRF G KAAW+ YS  SDADLIAEH IWAAV
Sbjct: 181 IFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAV 240
Query: 266 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQRVKLAEFMKGK 325
           DPYAKNEAFN +NGDVFKWKH WKVLAEQF                    +KL + MKGK
Sbjct: 241 DPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGV--------DLKLQDLMKGK 292
Query: 326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFIT 385
           E VWEEIVREN L PT+L +VG WWF D++L  E  L SMNKSKEHGF GFRNSKN+FI+
Sbjct: 293 EPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFIS 352
Query: 386 WIDKVKGFKIVP 397
           WIDK K +KIVP
Sbjct: 353 WIDKAKAYKIVP 364

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	397
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-139
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-06
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	6e-05
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-04
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	2e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score =  400 bits (1028), Expect = e-139
 Identities = 267/371 (71%), Positives = 303/371 (81%), Gaps = 8/371 (2%)

Query: 27  SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE 86
           SVALIVGVTGI+GNSLAEILPL DTPGGPWKVYGVARR +P W+ D+ + YVQCD+SDP+
Sbjct: 2   SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPD 61

Query: 87  ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT 146
           ++QAKLS LTDVTH+FYVTW NRSTE ENC+ N  MFRNVL AVIPN PNL+H+ LQTG 
Sbjct: 62  DSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGR 121

Query: 147 KHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTI 206
           KHY+GPFE++GKI+ +DPP+TED+PRL   NFYY LEDI+ EEVEKKE L+WSVHRP  I
Sbjct: 122 KHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNI 181

Query: 207 FGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD 266
           FGFSPYS+MNLVG LCVYAA+CKHEG  LRF G KAAW+ YS  SDADLIAEH IWAAVD
Sbjct: 182 FGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVD 241

Query: 267 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE 326
           PYAKNEAFN +NGDVFKWKH WKVLAEQFG+E     E           +KL + MKGKE
Sbjct: 242 PYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGV--------DLKLQDLMKGKE 293

Query: 327 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITW 386
            VWEEIVREN L PT+L +VG WWF D++L  E  L SMNKSKEHGF GFRNSKN+FI+W
Sbjct: 294 PVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISW 353

Query: 387 IDKVKGFKIVP 397
           IDK K +KIVP
Sbjct: 354 IDKAKAYKIVP 364

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 34/281 (12%), Positives = 78/281 (27%), Gaps = 49/281 (17%)

Query: 29  ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL-VEYVQCDVSDPEE 87
             ++G TG++G+  A  +       G   +  + R         +L  E    ++ D   
Sbjct: 16  YAVLGATGLLGHHAARAI----RAAG-HDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAG 70

Query: 88  TQAKLSQLTDVTHIFYV---TWTNRSTEAENCKIN--GSMFRNVLRAVIPNAPNLRHVCL 142
            +     L  +  + +      +      E        +       A +     +  +  
Sbjct: 71  LER---ALRGLDGVIFSAGYYPSRPRRWQEEVASALGQT--NPFYAACL--QARVPRILY 123

Query: 143 QTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF--YYTL-----EDILFEEVEKKEE 195
             G+ + +          P   P  E +     P+    Y L     ++   E+   +  
Sbjct: 124 -VGSAYAMPR-------HPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQA--RNG 173

Query: 196 LSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL 255
           L   +  P  + G     +    G +          G    +   +          DA  
Sbjct: 174 LPVVIGIPGMVLG--ELDIGPTTGRVITAIG----NGEMTHYVAGQRNV------IDAAE 221

Query: 256 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG 296
                +  A++     E +     ++ +   L + +AE  G
Sbjct: 222 AGRGLL-MALERGRIGERYLLTGHNL-EMADLTRRIAELLG 260

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 14/91 (15%)

Query: 30  LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL----VEYVQCDVSDP 85
           ++ G TG  G S+A  L L D   G +KV  V R P+    A  L     E VQ D  D 
Sbjct: 9   VVFGGTGAQGGSVARTL-LED---GTFKVRVVTRNPRKK-AAKELRLQGAEVVQGDQDDQ 63

Query: 86  EETQAKLSQLTDVTHIFYVT--WTNRSTEAE 114
              +     L      F VT  W + S E E
Sbjct: 64  VIMEL---ALNGAYATFIVTNYWESCSQEQE 91

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 10/87 (11%)

Query: 21  PARSYQSVALIVGVT-GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL----- 74
           P  S+ +  LI G   G+ G  L + L     P     ++   R  +     + L     
Sbjct: 16  PRGSHMNSILITGCNRGL-GLGLVKALLNLPQPP--QHLFTTCRNREQAKELEDLAKNHS 72

Query: 75  -VEYVQCDVSDPEETQAKLSQLTDVTH 100
            +  ++ D+ + +     ++ +  VT 
Sbjct: 73  NIHILEIDLRNFDAYDKLVADIEGVTK 99

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 28/152 (18%)

Query: 28  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE 87
            ALI GV G VG  LA  L   +      +V+G +R  +      ++ E +  D+ D + 
Sbjct: 14  RALITGVAGFVGKYLANHLTEQN-----VEVFGTSRNNEA--KLPNV-EMISLDIMDSQR 65

Query: 88  TQAKLSQLTDVTHIF--------YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH 139
            +  +S      +IF          +W N+        + G++  +VL AV  +  + R 
Sbjct: 66  VKKVISD-IKPDYIFHLAAKSSVKDSWLNKKGTFST-NVFGTL--HVLDAVRDSNLDCRI 121

Query: 140 VCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 171
             L  G+       E +G I P + P +E+  
Sbjct: 122 --LTIGSS------EEYGMILPEESPVSEENQ 145

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 22/179 (12%)

Query: 30  LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ 89
            I+G TG  G+ + E         G  +V  + R           +  +Q D+ D   T 
Sbjct: 4   GIIGATGRAGSRILEEA----KNRG-HEVTAIVRNAGKITQTHKDINILQKDIFDL--TL 56

Query: 90  AKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY 149
           + LS    V   + ++         +         +++  +         V     +   
Sbjct: 57  SDLSDQNVVVDAYGISPDEAEKHVTS-------LDHLISVLNGTVSPRLLVVGGAASLQI 109

Query: 150 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 208
                  G          E      A      LE +   +     E SW+   P  +F 
Sbjct: 110 DED----GNTLLESKGLREAPYYPTARAQAKQLEHLKSHQ----AEFSWTYISPSAMFE 160

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 58/358 (16%), Positives = 97/358 (27%), Gaps = 109/358 (30%)

Query: 70  NADHLVEYVQC-DVSD-------PEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGS 121
             D  V+   C DV D        EE    +     V+    + WT  S + E  +    
Sbjct: 25  FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ---K 81

Query: 122 MFRNVLRAVIPN----APNLRHVCLQTG--TKHYLGPFEAFGKIKPYDPPFTE-DMPRLD 174
               VLR    N       ++    Q    T+ Y+   E   ++   +  F + ++ RL 
Sbjct: 82  FVEEVLR---INYKFLMSPIKTEQRQPSMMTRMYI---EQRDRLYNDNQVFAKYNVSRLQ 135

Query: 175 APNFYYTLEDILFEEVEKKEELSWSVHRPD---TIFGFSPYSLMNLVGALCVYAAVCKHE 231
               Y  L   L        EL     RP     I G      +   G   V   VC   
Sbjct: 136 P---YLKLRQAL-------LEL-----RPAKNVLIDG------VLGSGKTWVALDVCLSY 174

Query: 232 GIPLRFPGTKAAW----ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHL 287
            +  +    K  W     C S   +  L    ++   +DP                    
Sbjct: 175 KVQCKMDF-KIFWLNLKNCNS--PETVLEMLQKLLYQIDPN------------------- 212

Query: 288 WKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVG 347
           W   ++        +   + E         L   +K K      +V         L  V 
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAE---------LRRLLKSKPYENCLLV---------LLNVQ 254

Query: 348 AWWFVD--------LVLTGEAKLASM-------NKSKEHGFSGF--RNSKNSFITWID 388
                +        L+ T   ++          + S +H          K+  + ++D
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	397
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.98
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.98
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.98
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.97
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.96
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.96
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.96
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.95
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.95
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.95
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.94
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.92
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.91
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.91
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.91
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.91
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.91
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.9
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.9
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.89
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.89
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.88
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.88
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.87
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.87
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.87
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.86
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.82
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.82
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.78
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.77
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.76
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.74
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.73
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.72
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.72
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.71
1spx_A	278	Short-chain reductase family member (5L265); paral	99.7
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.68
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.67
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.67
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.66
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.66
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.66
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.66
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.66
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.65
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.64
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.64
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.64
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.63
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.63
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.63
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.63
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.63
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.62
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.62
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.62
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.62
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.62
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.62
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.62
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.61
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.61
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.61
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.61
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.6
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.6
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.6
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.6
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.6
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.6
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.6
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.59
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.59
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.59
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.59
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.59
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.58
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.58
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.58
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.58
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.58
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.58
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.58
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.58
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.58
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.58
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.58
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.58
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.58
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.58
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.58
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.57
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.57
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.57
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.57
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.57
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.57
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.57
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.57
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.57
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.56
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.56
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.56
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.56
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.56
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.56
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.56
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.56
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.56
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.55
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.55
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.55
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.55
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.55
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.55
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.55
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.55
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.55
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.55
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.55
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.54
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.54
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.54
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.54
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.54
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.54
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.54
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.53
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.53
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.53
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.53
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.53
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.53
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.53
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.53
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.53
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.53
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.52
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.52
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.52
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.52
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.52
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.52
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.52
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.52
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.52
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.52
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.51
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.51
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.51
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.51
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.51
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.51
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.51
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.5
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.5
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.5
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.5
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.5
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.49
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.49
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.49
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.49
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.49
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.49
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.48
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.48
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.48
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.48
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.47
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.47
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.47
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.47
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.47
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.47
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.47
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.46
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.46
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.46
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.46
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.46
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.45
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.45
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.45
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.45
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.45
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.44
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.44
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.44
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.44
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.43
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.43
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.43
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.43
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.43
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.43
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.42
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.41
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.41
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.41
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.41
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.4
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.39
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.39
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.39
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.38
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.38
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.38
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.37
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.35
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.35
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.35
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.34
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.34
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.34
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.34
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.33
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.3
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.3
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.3
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.3
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.29
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.28
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.27
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.27
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.25
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.24
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.21
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.2
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.15
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.08
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.08
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.07
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.04
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.03
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.02
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.01
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.99
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.92
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.79
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.75
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.72
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.69
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.69
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.64
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.64
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.62
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.6
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.52
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.51
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.45
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.41
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.21
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.17
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.13
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.08
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.08
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.06
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.06
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.99
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	97.96
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.94
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.93
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.91
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.89
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.89
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.75
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.73
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.7
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.66
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.62
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.58
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.55
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.55
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.43
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.31
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.24
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.24
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.95
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.93
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.79
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.75
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.65
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.62
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.37
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.25
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.24
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.24
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.21
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.16
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.12
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.11
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.09
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.07
1lnq_A	336	MTHK channels, potassium channel related protein;	96.04
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	95.99
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.98
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.92
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.92
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.91
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.91
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.8
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	95.75
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.74
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	95.47
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.46
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.45
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.32
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.32
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.28
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.24
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.17
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	95.06
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.03
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.03
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.91
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.76
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	94.75
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	94.68
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	94.64
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	94.55
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	94.55
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	94.53
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.45
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	94.35
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.35
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	94.27
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	94.2
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	94.12
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.11
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	94.11
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	94.07
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	93.99
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	93.92
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	93.87
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	93.79
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	93.78
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	93.74
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	93.57
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	93.53
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	93.51
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	93.47
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	93.43
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	93.39
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	93.39
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	93.32
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	93.18
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	93.03
3qha_A	296	Putative oxidoreductase; seattle structural genomi	93.02
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	92.78
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	92.72
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	92.67
4eye_A	342	Probable oxidoreductase; structural genomics, niai	92.51
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	92.47
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	92.46
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	92.44
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	92.43
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	92.27
4ezb_A	317	Uncharacterized conserved protein; structural geno	92.17
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	92.16
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	92.15
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	92.14
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	92.11
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	91.98
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	91.97
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	91.97
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	91.96
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	91.84
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	91.84
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	91.84
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	91.8
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	91.8
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	91.74
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	91.55
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	91.55
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	91.54
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	91.52
3gms_A	340	Putative NADPH:quinone reductase; structural genom	91.48
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	91.48
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	91.44
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	91.41
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	91.3
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	91.28
3aw8_A	369	PURK, phosphoribosylaminoimidazole carboxylase, AT	91.26
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	91.25
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	91.23
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	91.2
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	91.19
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	91.15
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	91.13
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	91.02
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	90.95
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	90.89
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	90.89
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	90.77
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	90.68
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	90.6
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	90.58
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	90.5
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	90.44
4g6h_A	502	Rotenone-insensitive NADH-ubiquinone oxidoreducta	90.43
4g65_A	461	TRK system potassium uptake protein TRKA; structur	90.37
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	90.36
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	90.32
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	90.3
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	90.26
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	90.25
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	90.23
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	90.17
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	90.09
3l07_A	285	Bifunctional protein fold; structural genomics, ID	90.04
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	89.91
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	89.9
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	89.87
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	89.75
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	89.61
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	89.58
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	89.45
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	89.43
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	89.43
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	89.33
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	89.31
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	89.22
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	89.21
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	89.12
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	88.81
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	88.8
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	88.78
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	88.76
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	88.68
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	88.59
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	88.59
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	88.58
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	88.5
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	88.42
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	88.41
2y1e_A	398	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	88.41
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	88.31

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=2.3e-44  Score=343.20  Aligned_cols=352  Identities=70%  Similarity=1.216  Sum_probs=273.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC-----cEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc---CCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP-----WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ---LTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g-----~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V   98 (397)
                      |+|||||||||||++|+++|++     +|     ++|++++|++........+++++.+|++|.+++.+++++   +|.|
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~-----~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~v   76 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPL-----ADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHV   76 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTS-----TTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHh-----CCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEE
Confidence            6899999999999999999998     78     999999998654322335789999999999999999998   8889


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCc
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  178 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~  178 (397)
                      +|+|+..   ..++.+.+++|+.++.+++++|++.+.+++++++.++..+|.||..+||.......+++|++|..|....
T Consensus        77 ih~a~~~---~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~  153 (364)
T 2v6g_A           77 FYVTWAN---RSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNF  153 (364)
T ss_dssp             EECCCCC---CSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCH
T ss_pred             EECCCCC---cchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchh
Confidence            9987643   3467888999999999999999986446889998888778888877888642234678898877664455


Q ss_pred             chhHHHHHHHHHhcCCC-eeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHH
Q 015961          179 YYTLEDILFEEVEKKEE-LSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIA  257 (397)
Q Consensus       179 ~y~~e~~l~~~~~~~~g-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la  257 (397)
                      ||..|+++.++. +..+ ++++++||+.|||+......+.......+..+.+..+.++.++|++.+++.+.++.|++++|
T Consensus       154 y~~~E~~~~~~~-~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva  232 (364)
T 2v6g_A          154 YYDLEDIMLEEV-EKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIA  232 (364)
T ss_dssp             HHHHHHHHHHHH-TTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHH
T ss_pred             hHHHHHHHHHHh-hcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHH
Confidence            688899998876 5566 99999999999996544332322222122222212366767788887777778888888889


Q ss_pred             HHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCC-CchhhcCCCCccccCHHHHhccchHHHHHHHHHh
Q 015961          258 EHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGL-SEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVREN  336 (397)
Q Consensus       258 ~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (397)
                      ++++.++.++...+++||+++++.+|++|+++.+++.+|.+...+ ..         .|..+..+++...+.|..+.+.+
T Consensus       233 ~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------~p~~~~~~~~~~~~~~~~~~~~~  303 (364)
T 2v6g_A          233 EHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEG---------VDLKLQDLMKGKEPVWEEIVREN  303 (364)
T ss_dssp             HHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTT---------CCCCHHHHTTTCHHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCC---------CCccHHHHHhhhHHHHHHHHHHh
Confidence            999888876555688999999999999999999999999876543 11         56778888887777888887777


Q ss_pred             CCCcccccccccchhhhhhhcCcc-cccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961          337 QLQPTRLDEVGAWWFVDLVLTGEA-KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                      ++.+..+..+..|.+.++.+.. + ..+|++|++++||+|.++++|+|+++++||++.|+||
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp  364 (364)
T 2v6g_A          304 GLTPTKLKDVGIWWFGDVILGN-ECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP  364 (364)
T ss_dssp             TCCCCCHHHHCCHHHHHHHHTS-CCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCccccccccccchhhhcccc-chhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7665444332345444443322 5 4789999999999999999999999999999999998

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=4.3e-38  Score=293.47  Aligned_cols=294  Identities=19%  Similarity=0.186  Sum_probs=215.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  104 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~  104 (397)
                      |+++|||||||||||++|+++|++     +|++|++++|++....  ..+++++.+|++ .+++.++++++|.|+|+|+.
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~--~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~   72 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKN-----DGNTPIILTRSIGNKA--INDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT   72 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCCC-------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-----CCCEEEEEeCCCCccc--CCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence            568999999999999999999999     8999999999843322  248899999999 99999999999999999875


Q ss_pred             cccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH--
Q 015961          105 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--  182 (397)
Q Consensus       105 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~--  182 (397)
                      ....  ++...+++|+.++.+++++|++.+  +++++++||..+|+..         ...+++|+++..|...  |+.  
T Consensus        73 ~~~~--~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vyg~~---------~~~~~~E~~~~~p~~~--Y~~sK  137 (311)
T 3m2p_A           73 RGSQ--GKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAYSDE---------TSLPWNEKELPLPDLM--YGVSK  137 (311)
T ss_dssp             CCSS--SCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCCCG---------GGCSBCTTSCCCCSSH--HHHHH
T ss_pred             CCCC--ChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhCCC---------CCCCCCCCCCCCCCch--hHHHH
Confidence            4332  667788999999999999999864  7889988876655432         2467788888766544  654  


Q ss_pred             ---HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961          183 ---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  259 (397)
Q Consensus       183 ---e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  259 (397)
                         |+++.++. ++.+++++++||+.|||+..... ++...+...  +  ..+.++.++|++.+.+.++++.|+   |++
T Consensus       138 ~~~E~~~~~~~-~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~--~--~~~~~~~~~g~~~~~~~~v~v~Dv---a~a  208 (311)
T 3m2p_A          138 LACEHIGNIYS-RKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQ--A--FHGEQLTLHANSVAKREFLYAKDA---AKS  208 (311)
T ss_dssp             HHHHHHHHHHH-HHSCCEEEEEEECEEECSCC--C-CHHHHHHHH--H--HTCCCEEESSBCCCCEEEEEHHHH---HHH
T ss_pred             HHHHHHHHHHH-HHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHH--H--HcCCCeEEecCCCeEEceEEHHHH---HHH
Confidence               56666554 55799999999999999533211 222222111  1  136677777877776666666554   888


Q ss_pred             HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCC
Q 015961          260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  339 (397)
Q Consensus       260 ~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (397)
                      ++.++..+. .+++||+++++.+|+.|+++.+++.+|.+......          +..                      
T Consensus       209 ~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~----------~~~----------------------  255 (311)
T 3m2p_A          209 VIYALKQEK-VSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVK----------NPN----------------------  255 (311)
T ss_dssp             HHHHTTCTT-CCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEEC----------SSS----------------------
T ss_pred             HHHHHhcCC-CCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceec----------CCC----------------------
Confidence            887776654 78999999999999999999999999986432110          000                      


Q ss_pred             cccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961          340 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                       .. .            ...+..+|++|+++ |||+|.++++++|+++++|+++.+-.|
T Consensus       256 -~~-~------------~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~  300 (311)
T 3m2p_A          256 -AN-E------------GIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDVP  300 (311)
T ss_dssp             -BC-C------------SCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-----
T ss_pred             -CC-C------------CcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccCc
Confidence             00 0            00145689999997 799999999999999999999887654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.5e-38  Score=300.08  Aligned_cols=301  Identities=15%  Similarity=0.108  Sum_probs=218.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC------CC------CCceEEEccCCCHHHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------AD------HLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~------~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ++++|||||||||||++|+++|++     +|++|++++|++.....      ..      .+++++.+|+.|.+++.+++
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLK-----LNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            458999999999999999999998     89999999997643210      00      57899999999999999999


Q ss_pred             ccCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961           93 SQLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      +++|.|+|+|+......  .++...+++|+.++.+++++|++.+  +++|+++||..+|+..         ...+++|++
T Consensus        99 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg~~---------~~~~~~E~~  167 (351)
T 3ruf_A           99 KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYGDH---------PALPKVEEN  167 (351)
T ss_dssp             TTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTC---------CCSSBCTTC
T ss_pred             cCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcCCC---------CCCCCccCC
Confidence            99999999987432221  2567788999999999999999864  7899998876655432         246788988


Q ss_pred             CCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc---hhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          171 PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       171 p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                      +..|...  |+.     |+++..+. ++.|++++++||+.|||+......   .+...+..  .+.  .+.++.++|++.
T Consensus       168 ~~~p~~~--Y~~sK~~~E~~~~~~~-~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~g~g~  240 (351)
T 3ruf_A          168 IGNPLSP--YAVTKYVNEIYAQVYA-RTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTA--AML--KGDDVYINGDGE  240 (351)
T ss_dssp             CCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHH--HHH--HTCCCEEESSSC
T ss_pred             CCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHH--HHH--cCCCcEEeCCCC
Confidence            8766543  654     55555554 456899999999999995432211   22222211  111  255667777777


Q ss_pred             ccceeeecccHHHHHHHHHHHhcC-CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHH
Q 015961          243 AWECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  321 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~-~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  321 (397)
                      +.+.++++.|   +|.+++.++.. +...+++||+++++.+|++|+++.+++.+|.+......          +...   
T Consensus       241 ~~~~~i~v~D---va~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~----------~~~~---  304 (351)
T 3ruf_A          241 TSRDFCYIDN---VIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKL----------SIKY---  304 (351)
T ss_dssp             CEECCEEHHH---HHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC---------------EE---
T ss_pred             eEEeeEEHHH---HHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccc----------cccc---
Confidence            6666666555   48887777765 35678999999999999999999999999984332110          0000   


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          322 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                    ....+..               ..+..+|++|+++ |||+|.++++++|+++++||+++
T Consensus       305 --------------~~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          305 --------------REFRSGD---------------VRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF  348 (351)
T ss_dssp             --------------ECCCTTC---------------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             --------------cCCCCCc---------------cceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence                          0000000               0145689999987 79999999999999999999864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=8.4e-37  Score=284.98  Aligned_cols=293  Identities=15%  Similarity=0.163  Sum_probs=208.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-CCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-NWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |+|||||||||||++|+++|++     +| .|++++++... ......+++++.+|++| +++.++++++|.|+|+|+..
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~-----~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~   74 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSE-----SN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANP   74 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTT-----TS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHh-----CC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCC
Confidence            5899999999999999999998     78 55555554322 21123578999999999 88999999999999998754


Q ss_pred             ccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH-
Q 015961          106 WTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-  182 (397)
Q Consensus       106 ~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-  182 (397)
                      ...  ..++...+++|+.++.+++++|++.+  +++++++||..+|+..         ...+++|+.|..|...  |+. 
T Consensus        75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~vyg~~---------~~~~~~E~~~~~~~~~--Y~~s  141 (313)
T 3ehe_A           75 DVRIGAENPDEIYRNNVLATYRLLEAMRKAG--VSRIVFTSTSTVYGEA---------KVIPTPEDYPTHPISL--YGAS  141 (313)
T ss_dssp             CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGGCSC---------SSSSBCTTSCCCCCSH--HHHH
T ss_pred             ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeCchHHhCcC---------CCCCCCCCCCCCCCCH--HHHH
Confidence            332  34678899999999999999998864  6789988876655432         2467788887666443  654 


Q ss_pred             ----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 015961          183 ----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  258 (397)
Q Consensus       183 ----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  258 (397)
                          |+++..+. ++.+++++++||+.|||+  +........+..  .+.+ ...++...|++.+.+.++++.|+   |.
T Consensus       142 K~~~e~~~~~~~-~~~g~~~~ilRp~~v~G~--~~~~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~i~v~Dv---a~  212 (313)
T 3ehe_A          142 KLACEALIESYC-HTFDMQAWIYRFANVIGR--RSTHGVIYDFIM--KLKR-NPEELEILGNGEQNKSYIYISDC---VD  212 (313)
T ss_dssp             HHHHHHHHHHHH-HHTTCEEEEEECSCEEST--TCCCSHHHHHHH--HHHH-CTTEEEESTTSCCEECCEEHHHH---HH
T ss_pred             HHHHHHHHHHHH-HhcCCCEEEEeeccccCc--CCCcChHHHHHH--HHHc-CCCceEEeCCCCeEEeEEEHHHH---HH
Confidence                55555554 567999999999999994  322222222211  1111 22455667887776666666555   78


Q ss_pred             HHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCC
Q 015961          259 HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQL  338 (397)
Q Consensus       259 ~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (397)
                      +++.++. ....+++||+++++.+|++|+++.+++.+|.+.....           +.....        |.        
T Consensus       213 a~~~~~~-~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-----------~~~~~~--------~~--------  264 (313)
T 3ehe_A          213 AMLFGLR-GDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRF-----------TGGDRG--------WK--------  264 (313)
T ss_dssp             HHHHHTT-CCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEE-----------C-----------------------
T ss_pred             HHHHHhc-cCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEE-----------CCCccC--------Cc--------
Confidence            8777765 4566789999999999999999999999998642210           000000        00        


Q ss_pred             CcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          339 QPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                        ..               .....+|++|+++|||+|.++++|+|+++++||++.
T Consensus       265 --~~---------------~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~  302 (313)
T 3ehe_A          265 --GD---------------VPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVED  302 (313)
T ss_dssp             ----------------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHH
T ss_pred             --cc---------------cceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence              00               013457999999999999999999999999999875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=3.9e-37  Score=291.37  Aligned_cols=295  Identities=16%  Similarity=0.132  Sum_probs=216.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ...+|+|||||||||||++|+++|++     +|++|++++|++..     .+++++.+|++|.+++.++++++|.|+|+|
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   85 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRT-----QGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLG   85 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHH-----TTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHh-----CCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence            34567999999999999999999998     89999999998644     578899999999999999999999999998


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      +............+++|+.++.+++++|++.+  +++|+++||..+|+..       .....+++|+++..|...  |+.
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~V~~SS~~vyg~~-------~~~~~~~~E~~~~~~~~~--Y~~  154 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAG--VRRFVFASSGEVYPEN-------RPEFLPVTEDHPLCPNSP--YGL  154 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGTTTT-------SCSSSSBCTTSCCCCCSH--HHH
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEECCHHHhCCC-------CCCCCCcCCCCCCCCCCh--HHH
Confidence            75444444557889999999999999998854  7899998876666431       123567888888766444  654


Q ss_pred             -----HHHHHHHHhcCCCeeEEEEcCCcee-------------eccCCCc----------chhHHHHHHHHHHhhhcCCC
Q 015961          183 -----EDILFEEVEKKEELSWSVHRPDTIF-------------GFSPYSL----------MNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       183 -----e~~l~~~~~~~~g~~~~ilRp~~v~-------------G~~~~~~----------~~~~~~~~~~~~i~~~~~~~  234 (397)
                           |+++..+. ++.+++++++||+.||             |+.....          ..+..   .++. ....+.+
T Consensus       155 sK~~~E~~~~~~~-~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~  229 (347)
T 4id9_A          155 TKLLGEELVRFHQ-RSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIA---ELLQ-SRDIGEP  229 (347)
T ss_dssp             HHHHHHHHHHHHH-HHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHH---HHHH-HHCCSSC
T ss_pred             HHHHHHHHHHHHH-HhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHH---HHHH-HHHcCCC
Confidence                 55555554 5678999999999999             7321100          11111   1111 1123556


Q ss_pred             ceecCCcccccee-eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCc
Q 015961          235 LRFPGTKAAWECY-SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGT  313 (397)
Q Consensus       235 ~~~~g~~~~~~~~-~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~  313 (397)
                      +.+.|++.+.+.+ .++.+++++|.+++.++..+...+++||+++++.+|+.|+++.+++.+|.+.....          
T Consensus       230 ~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~----------  299 (347)
T 4id9_A          230 SHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVD----------  299 (347)
T ss_dssp             CEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEE----------
T ss_pred             eEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceee----------
Confidence            5666666665555 23345555688888888776567899999999999999999999999998643210          


Q ss_pred             cccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          314 QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                        .                      ...+.                ...+|++|+++ |||+|.++++|+|+++++|+++
T Consensus       300 --~----------------------p~~~~----------------~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~  339 (347)
T 4id9_A          300 --F----------------------PGDGV----------------YYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQ  339 (347)
T ss_dssp             --C----------------------SSCCC----------------BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             --C----------------------CCccc----------------ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence              0                      00000                34579999986 7999999999999999999986


Q ss_pred             C
Q 015961          393 F  393 (397)
Q Consensus       393 ~  393 (397)
                      .
T Consensus       340 ~  340 (347)
T 4id9_A          340 R  340 (347)
T ss_dssp             H
T ss_pred             h
Confidence            4

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.5e-36  Score=287.17  Aligned_cols=295  Identities=13%  Similarity=0.089  Sum_probs=213.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      +|+|||||||||||++|+++|++     .|  ++|++++|.....       ....++++++.+|++|.+.+.+++++  
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           24 AMNILVTGGAGFIGSNFVHYMLQ-----SYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHH-----HCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             CCeEEEECCccHHHHHHHHHHHh-----hCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence            46899999999999999999998     67  7899999865221       11235899999999999999999988  


Q ss_pred             CCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  172 (397)
Q Consensus        95 ~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~  172 (397)
                      +|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  +++|+++||..+|+..        ....+++|++|.
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vy~~~--------~~~~~~~E~~~~  168 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP--HIKLVQVSTDEVYGSL--------GKTGRFTEETPL  168 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST--TSEEEEEEEGGGGCCC--------CSSCCBCTTSCC
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeCchHHhCCC--------CcCCCcCCCCCC
Confidence            88999998754332  23567789999999999999999864  7889988876666432        124678898887


Q ss_pred             CCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961          173 LDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  247 (397)
Q Consensus       173 ~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  247 (397)
                      .|...  |+.     |+++..+. ++.+++++++||+.|||+... ...+...+..  .+.  .+.++.+.|++.+.+.+
T Consensus       169 ~p~~~--Y~~sK~~~E~~~~~~~-~~~g~~~~ilRp~~v~G~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~  240 (346)
T 4egb_A          169 APNSP--YSSSKASADMIALAYY-KTYQLPVIVTRCSNNYGPYQY-PEKLIPLMVT--NAL--EGKKLPLYGDGLNVRDW  240 (346)
T ss_dssp             CCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEESTTCC-TTSHHHHHHH--HHH--TTCCCEEETTSCCEECE
T ss_pred             CCCCh--hHHHHHHHHHHHHHHH-HHhCCCEEEEeecceeCcCCC-ccchHHHHHH--HHH--cCCCceeeCCCCeEEee
Confidence            66544  654     55555554 456899999999999994322 1222222211  111  35566677777766666


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  327 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (397)
                      +++.|+   |.+++.++..+. .+++||+++++.+|+.|+++.+++.+|.+...+..           ..          
T Consensus       241 i~v~Dv---a~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------~~----------  295 (346)
T 4egb_A          241 LHVTDH---CSAIDVVLHKGR-VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEY-----------VT----------  295 (346)
T ss_dssp             EEHHHH---HHHHHHHHHHCC-TTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEE-----------EC----------
T ss_pred             EEHHHH---HHHHHHHHhcCC-CCCEEEECCCCceeHHHHHHHHHHHhCCCcccccc-----------cC----------
Confidence            666655   777777766544 78899999999999999999999999986432110           00          


Q ss_pred             HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                   .....            ..++.+|++|+++ |||+|.++++|+|+++++||++.
T Consensus       296 -------------~~~~~------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (346)
T 4egb_A          296 -------------DRLGH------------DRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKN  337 (346)
T ss_dssp             -------------C--CC------------CSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             -------------CCCCC------------cceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence                         00000            0144589999985 79999999999999999999875

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=4.8e-37  Score=286.38  Aligned_cols=299  Identities=15%  Similarity=0.059  Sum_probs=210.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |+|||||||||||++|+++|++     +|++|++++|.+.... ....+++++.+|+.|.+ +.+++++ |.|+|+|+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVE-----LGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHh-----CCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCC
Confidence            4799999999999999999998     8999999999765421 12367899999999998 8777777 8899998743


Q ss_pred             ccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH-
Q 015961          106 WTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-  182 (397)
Q Consensus       106 ~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-  182 (397)
                      ...  ..++...+++|+.++.+++++|++.+  +++++++||..+|+..         ...+++|+.|..|...  |+. 
T Consensus        74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~vyg~~---------~~~~~~e~~~~~p~~~--Y~~s  140 (312)
T 3ko8_A           74 EVRLSTTEPIVHFNENVVATFNVLEWARQTG--VRTVVFASSSTVYGDA---------DVIPTPEEEPYKPISV--YGAA  140 (312)
T ss_dssp             SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSC---------SSSSBCTTSCCCCCSH--HHHH
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeCcHHHhCCC---------CCCCCCCCCCCCCCCh--HHHH
Confidence            322  23677889999999999999998864  6789988876666432         2467788887666543  654 


Q ss_pred             ----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 015961          183 ----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  258 (397)
Q Consensus       183 ----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  258 (397)
                          |+++..+. ++.+++++++||++|||+  +...+....+..  .+.+ ...++...|++.+.+.++++.|+   |+
T Consensus       141 K~~~e~~~~~~~-~~~g~~~~~lrp~~v~g~--~~~~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~i~v~Dv---a~  211 (312)
T 3ko8_A          141 KAAGEVMCATYA-RLFGVRCLAVRYANVVGP--RLRHGVIYDFIM--KLRR-NPNVLEVLGDGTQRKSYLYVRDA---VE  211 (312)
T ss_dssp             HHHHHHHHHHHH-HHHCCEEEEEEECEEECT--TCCSSHHHHHHH--HHHH-CTTEEEEC----CEECEEEHHHH---HH
T ss_pred             HHHHHHHHHHHH-HHhCCCEEEEeeccccCc--CCCCChHHHHHH--HHHh-CCCCeEEcCCCCeEEeeEEHHHH---HH
Confidence                55555554 456899999999999994  322222222211  1111 22345567777766667666655   77


Q ss_pred             HHHHHhcC---CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHH
Q 015961          259 HQIWAAVD---PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRE  335 (397)
Q Consensus       259 ~~~~~~~~---~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (397)
                      +++.++..   +...+++||+++++.+|+.|+++.+++.+|.+.....          .+...    .           .
T Consensus       212 a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~----~-----------~  266 (312)
T 3ko8_A          212 ATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRL----------VPSTP----D-----------G  266 (312)
T ss_dssp             HHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEE----------C---------------------
T ss_pred             HHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceee----------cCccc----c-----------c
Confidence            77777665   4567889999999999999999999999998643210          00000    0           0


Q ss_pred             hCCCcccccccccchhhhhhhcCcccccchhhHH-HcCCCCccCCHHHHHHHHHHHhcCCC
Q 015961          336 NQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFKI  395 (397)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~~~~~~~  395 (397)
                      .+. +..               .....+|++|++ +|||+|.++++|+|+++++|++++||
T Consensus       267 ~~~-~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~  311 (312)
T 3ko8_A          267 RGW-PGD---------------VKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKELW  311 (312)
T ss_dssp             -----CC---------------CSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred             cCC-CCC---------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhc
Confidence            000 000               013468999996 57999999999999999999998876

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=6.6e-37  Score=292.59  Aligned_cols=311  Identities=13%  Similarity=0.186  Sum_probs=214.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC--CCCCCCceEEEccCC-CHHHHHHHHccCCCee
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--WNADHLVEYVQCDVS-DPEETQAKLSQLTDVT   99 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~-d~~~l~~~~~~~~~V~   99 (397)
                      .++++|||||||||||++|+++|++     + |++|++++|++...  ....++++++.+|++ |.+.+.++++++|.|+
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~-----~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vi   96 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILE-----TTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVIL   96 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHH-----HSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHh-----CCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEE
Confidence            3457999999999999999999998     6 89999999986542  112368999999999 9999999999999999


Q ss_pred             EEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC---C
Q 015961          100 HIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL---D  174 (397)
Q Consensus       100 h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~---~  174 (397)
                      |+|+......  .++.+.+++|+.++.+++++|++.+   ++++++||..+|+..         ...++.|+++..   |
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS~~vyg~~---------~~~~~~e~~~~~~~~p  164 (372)
T 3slg_A           97 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGMC---------ADEQFDPDASALTYGP  164 (372)
T ss_dssp             ECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECCGGGGBSC---------CCSSBCTTTCCEEECC
T ss_pred             EcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCcHHHhCCC---------CCCCCCccccccccCC
Confidence            9987543221  2567888999999999999999864   788988876655432         234566666431   1


Q ss_pred             --CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-------cchhHHHHHHHHHHhhhcCCCceecCC
Q 015961          175 --APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-------LMNLVGALCVYAAVCKHEGIPLRFPGT  240 (397)
Q Consensus       175 --~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~g~  240 (397)
                        .+...|+.     |+++..+. ++ +++++++||++|||+....       ...+...+..  .+.  .+.++.++++
T Consensus       165 ~~~p~~~Y~~sK~~~E~~~~~~~-~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~  238 (372)
T 3slg_A          165 INKPRWIYACSKQLMDRVIWGYG-ME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLG--HIV--RGENISLVDG  238 (372)
T ss_dssp             TTCTTHHHHHHHHHHHHHHHHHH-TT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHH--HHH--HTCCEEEGGG
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHH-HC-CCCEEEEccccccCCCcccccccccccchHHHHHHH--HHH--cCCCcEEeCC
Confidence              12234664     55555554 44 9999999999999964321       1112222211  111  3567777777


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCC-CeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccC
Q 015961          241 KAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK  317 (397)
Q Consensus       241 ~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  317 (397)
                      +.+.+.++++.|   +|++++.++..+.  ..+++||++++ +.+|+.|+++.+++.+|.+......             
T Consensus       239 g~~~~~~i~v~D---va~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~-------------  302 (372)
T 3slg_A          239 GSQKRAFTYVDD---GISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADS-------------  302 (372)
T ss_dssp             GCCEEECEEHHH---HHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHH-------------
T ss_pred             CceEEEEEEHHH---HHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccc-------------
Confidence            776666666555   4888888777654  57899999994 8999999999999999976432110             


Q ss_pred             HHHHhccchHHHHHHHHHhCCCcccccccccchhhhhh-hcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          318 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLV-LTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                       .....              +.+...     ..+.... .......+|++|+++ |||+|.++++|+|+++++|++++
T Consensus       303 -~~~~~--------------~~~~~~-----~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          303 -AKRVK--------------LVETTS-----GAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             -HHTCC--------------EEEC------------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             -cccce--------------eeeccc-----cccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence             00000              000000     0000000 000145689999986 79999999999999999999865

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=6.9e-36  Score=282.07  Aligned_cols=299  Identities=17%  Similarity=0.115  Sum_probs=212.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--------CCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------ADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .++++|||||||||||++|+++|++     +|++|++++|+......        ...+++++.+|++|++++.++++  
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (341)
T 3enk_A            3 STKGTILVTGGAGYIGSHTAVELLA-----HGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAH   77 (341)
T ss_dssp             CSSCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHS
T ss_pred             CCCcEEEEecCCcHHHHHHHHHHHH-----CCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhcc
Confidence            3457999999999999999999999     89999999997644210        02478899999999999999998  


Q ss_pred             cCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      ++|.|+|+|+.....  ...+.+.+++|+.++.+++++|++.+  +.+++++||..+|+..         ...+++|+.|
T Consensus        78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~g~~---------~~~~~~e~~~  146 (341)
T 3enk_A           78 PITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA--VKRIVFSSSATVYGVP---------ERSPIDETFP  146 (341)
T ss_dssp             CCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGBCSC---------SSSSBCTTSC
T ss_pred             CCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC--CCEEEEEecceEecCC---------CCCCCCCCCC
Confidence            788899997653221  12456788999999999999998864  6788888876655432         2467788887


Q ss_pred             CCCCCCcchhH-----HHHHHHHHhcCC-CeeEEEEcCCceeeccCCC---------cchhHHHHHHHHHHhhhcCCCce
Q 015961          172 RLDAPNFYYTL-----EDILFEEVEKKE-ELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKHEGIPLR  236 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~~~~-g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~  236 (397)
                      ..|...  |+.     |+++..+. ++. +++++++||++|||+.+..         ..++...+   .....+...++.
T Consensus       147 ~~~~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  220 (341)
T 3enk_A          147 LSATNP--YGQTKLMAEQILRDVE-AADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYV---AQVAVGKLEKLR  220 (341)
T ss_dssp             CBCSSH--HHHHHHHHHHHHHHHH-HHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHH---HHHHHTSSSCEE
T ss_pred             CCCCCh--hHHHHHHHHHHHHHHh-hcCCCceEEEEeeccccCCccccccCCCcccCccchHHHH---HHHHhcCCCceE
Confidence            665443  664     55555544 334 5999999999999964321         01222111   111222234455


Q ss_pred             ecC------CccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhc
Q 015961          237 FPG------TKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEE  308 (397)
Q Consensus       237 ~~g------~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~  308 (397)
                      ..|      ++.+.++++|+.|+   |++++.++..  +...+++||+++++.+|++|+++.+++.+|.+.+....    
T Consensus       221 ~~g~~~~~~~g~~~~~~i~v~Dv---a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~----  293 (341)
T 3enk_A          221 VFGSDYPTPDGTGVRDYIHVVDL---ARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELV----  293 (341)
T ss_dssp             EECSCSSSTTSSCEECEEEHHHH---HHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEE----
T ss_pred             EeCCccCCCCCCeeEeeEEHHHH---HHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeC----
Confidence            555      56666666666555   7776666654  23568999999999999999999999999976432100    


Q ss_pred             CCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHH
Q 015961          309 GGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWI  387 (397)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~  387 (397)
                            +.                      .+..               .....+|++|+++ |||+|+++++|+|++++
T Consensus       294 ------~~----------------------~~~~---------------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~  330 (341)
T 3enk_A          294 ------AR----------------------RPGD---------------VAECYANPAAAAETIGWKAERDLERMCADHW  330 (341)
T ss_dssp             ------CC----------------------CTTC---------------CSEECBCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_pred             ------CC----------------------CCCC---------------ccccccCHHHHHHHcCCCCCCCHHHHHHHHH
Confidence                  00                      0000               0144589999985 79999999999999999


Q ss_pred             HHHhcCC
Q 015961          388 DKVKGFK  394 (397)
Q Consensus       388 ~~~~~~~  394 (397)
                      +|+++..
T Consensus       331 ~~~~~~~  337 (341)
T 3enk_A          331 RWQENNP  337 (341)
T ss_dssp             HHHHHST
T ss_pred             HHHHhcC
Confidence            9998864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.4e-35  Score=278.40  Aligned_cols=318  Identities=14%  Similarity=0.082  Sum_probs=204.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      ++|||||||||||++|+++|++     +|++|++++|++.... ....+++++.+|++|.+++.++++++|.|+|+|+..
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   88 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRA-----AGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYY   88 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC----
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccC
Confidence            5899999999999999999998     8999999999765421 112378899999999999999999999999998854


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC--CcchhH-
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP--NFYYTL-  182 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~--~~~y~~-  182 (397)
                      .....++.+.+++|+.++.+++++|++.+  +++++++||..+|+..       .....+ +|++|..|..  ...|+. 
T Consensus        89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~~~-------~~~~~~-~E~~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           89 PSRPRRWQEEVASALGQTNPFYAACLQAR--VPRILYVGSAYAMPRH-------PQGLPG-HEGLFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHT--CSCEEEECCGGGSCCC-------TTSSCB-CTTCCCSSCCTTSCHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEECCHHhhCcC-------CCCCCC-CCCCCCCccccccChHHHH
Confidence            33334667788999999999999999864  7889988877666432       100134 7887766621  233664 


Q ss_pred             ----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 015961          183 ----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  258 (397)
Q Consensus       183 ----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  258 (397)
                          |+++..+. +. +++++++||+.|||+..... .. ..+..  .+.  .+.++.+   +.+...++++   +++|+
T Consensus       159 K~~~e~~~~~~~-~~-g~~~~ilrp~~v~g~~~~~~-~~-~~~~~--~~~--~~~~~~~---~~~~~~~i~v---~Dva~  224 (342)
T 2x4g_A          159 KWALDEQAREQA-RN-GLPVVIGIPGMVLGELDIGP-TT-GRVIT--AIG--NGEMTHY---VAGQRNVIDA---AEAGR  224 (342)
T ss_dssp             HHHHHHHHHHHH-HT-TCCEEEEEECEEECSCCSSC-ST-THHHH--HHH--TTCCCEE---ECCEEEEEEH---HHHHH
T ss_pred             HHHHHHHHHHHh-hc-CCcEEEEeCCceECCCCccc-cH-HHHHH--HHH--cCCCccc---cCCCcceeeH---HHHHH
Confidence                55555544 34 89999999999999533111 11 11111  112  2434333   2333445544   45577


Q ss_pred             HHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCC
Q 015961          259 HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQL  338 (397)
Q Consensus       259 ~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (397)
                      +++.++.++.. +++||++++. +|+.|+++.+.+.+|.+... .          .+......+....+....   ..+.
T Consensus       225 ~~~~~~~~~~~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~----------~p~~~~~~~~~~~~~~~~---~~~~  288 (342)
T 2x4g_A          225 GLLMALERGRI-GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-P----------MSMAMARALATLGRLRYR---VSGQ  288 (342)
T ss_dssp             HHHHHHHHSCT-TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-E----------ECHHHHHHHHHHHHC----------
T ss_pred             HHHHHHhCCCC-CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-c----------CCHHHHHHHHHHHHHHHH---hhCC
Confidence            77777765444 8899999988 99999999999999986432 1          121111111110000000   0010


Q ss_pred             CcccccccccchhhhhhhcCcccccchhhHHH-cCC-CCccCCHHHHHHHHHHHhcCCCCC
Q 015961          339 QPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGF-SGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~-~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                       +..+..    +...  ....+..+|++|+++ +|| +| ++++|+|+++++|++++|+|+
T Consensus       289 -~~~~~~----~~~~--~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          289 -LPLLDE----TAIE--VMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             --------------C--CTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred             -CCCCCH----HHHH--HHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCCC
Confidence             000000    0000  001156689999987 799 99 999999999999999999985

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=8.4e-35  Score=277.01  Aligned_cols=295  Identities=13%  Similarity=0.116  Sum_probs=207.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC------------CC--CCCCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK------------PN--WNADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~------------~~--~~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      ++++|||||||||||++|+++|++.+   .|++|++++|...            ..  .....+++++.+|++|++++.+
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENH---PKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHC---TTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhC---CCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            35799999999999999999998621   3899999999654            11  0122467899999999999998


Q ss_pred             H-HccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           91 K-LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        91 ~-~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      + ..++|.|+|+|+.......++...+++|+.++.+++++|++.+  ++ |+++||..+|       |..   ..+++|+
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~~-~V~~SS~~vy-------g~~---~~~~~E~  152 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK--AK-VIYASSAGVY-------GNT---KAPNVVG  152 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT--CE-EEEEEEGGGG-------CSC---CSSBCTT
T ss_pred             hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC--Cc-EEEeCcHHHh-------CCC---CCCCCCC
Confidence            8 7889999999875444445788899999999999999998864  45 8888765555       432   3378888


Q ss_pred             CCCCCCCCcchhHHHHHHHHHhcCCC--eeEEEEcCCceeeccCCCcc---hhHHHHHHHHHHhhhcCCCceecCCcccc
Q 015961          170 MPRLDAPNFYYTLEDILFEEVEKKEE--LSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIPLRFPGTKAAW  244 (397)
Q Consensus       170 ~p~~~~~~~~y~~e~~l~~~~~~~~g--~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  244 (397)
                      ++..|...  |+..|...+.+.+...  ++++++||++|||++.....   .+...+   +... ..+.++...+++.+.
T Consensus       153 ~~~~p~~~--Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~g~~~  226 (362)
T 3sxp_A          153 KNESPENV--YGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQL---ALGA-MAFKEVKLFEFGEQL  226 (362)
T ss_dssp             SCCCCSSH--HHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHH---HHHH-HTTSEEECSGGGCCE
T ss_pred             CCCCCCCh--hHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHH---HHHH-HhCCCeEEECCCCeE
Confidence            87766543  7765555444322222  89999999999995332111   222222   1111 125555566776666


Q ss_pred             ceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhcc
Q 015961          245 ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKG  324 (397)
Q Consensus       245 ~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (397)
                      +.++++.|   +|++++.++..+ ..| +||++++..+|+.|+++.+++.+| +.....          .+..       
T Consensus       227 ~~~i~v~D---va~ai~~~~~~~-~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~----------~~~~-------  283 (362)
T 3sxp_A          227 RDFVYIED---VIQANVKAMKAQ-KSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVTY----------IKNP-------  283 (362)
T ss_dssp             EECEEHHH---HHHHHHHHTTCS-SCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEEC----------CC---------
T ss_pred             EccEEHHH---HHHHHHHHHhcC-CCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceEE----------CCCC-------
Confidence            66665555   588888777654 345 999999999999999999999999 432210          0000       


Q ss_pred             chHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHH-HcCCCCccCCHHHHHHHHHHHhcC
Q 015961          325 KEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                 +     ..             ...+..+|++|++ .|||+|.++++|+|+++++|+++.
T Consensus       284 -----------~-----~~-------------~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          284 -----------Y-----AF-------------FQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             ----------------------------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred             -----------C-----cC-------------cccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence                       0     00             0014568999996 579999999999999999999865

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-35  Score=272.29  Aligned_cols=280  Identities=14%  Similarity=0.119  Sum_probs=201.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~  101 (397)
                      .|+++|||||||||||++|+++|++     +|++|++++|.              .+|++|.+.+.++++  ++|.|+|+
T Consensus         3 ~M~m~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~--------------~~D~~d~~~~~~~~~~~~~d~vi~~   63 (287)
T 3sc6_A            3 AMKERVIITGANGQLGKQLQEELNP-----EEYDIYPFDKK--------------LLDITNISQVQQVVQEIRPHIIIHC   63 (287)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHSCT-----TTEEEEEECTT--------------TSCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cceeEEEEECCCCHHHHHHHHHHHh-----CCCEEEEeccc--------------ccCCCCHHHHHHHHHhcCCCEEEEC
Confidence            3545999999999999999999999     89999999993              489999999999998  58899999


Q ss_pred             EEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcc
Q 015961          102 FYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  179 (397)
Q Consensus       102 a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~  179 (397)
                      |+......  .++...+++|+.++.+++++|++.+  + +++++||..+|+..         ...+++|+++..|..  .
T Consensus        64 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~v~~SS~~vy~~~---------~~~~~~E~~~~~p~~--~  129 (287)
T 3sc6_A           64 AAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG--A-KLVYISTDYVFQGD---------RPEGYDEFHNPAPIN--I  129 (287)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT--C-EEEEEEEGGGSCCC---------CSSCBCTTSCCCCCS--H
T ss_pred             CcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEchhhhcCCC---------CCCCCCCCCCCCCCC--H
Confidence            87543222  3678889999999999999999875  3 58888876555432         246788988876644  3


Q ss_pred             hhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961          180 YTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  259 (397)
Q Consensus       180 y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  259 (397)
                      |+..|...+...+..+.+++++||+.|||+...   ++...+   +.... .+.++...|+  +...+++   ++++|++
T Consensus       130 Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~---~~~~~~---~~~~~-~~~~~~~~~~--~~~~~i~---v~Dva~~  197 (287)
T 3sc6_A          130 YGASKYAGEQFVKELHNKYFIVRTSWLYGKYGN---NFVKTM---IRLGK-EREEISVVAD--QIGSPTY---VADLNVM  197 (287)
T ss_dssp             HHHHHHHHHHHHHHHCSSEEEEEECSEECSSSC---CHHHHH---HHHHT-TCSEEEEECS--CEECCEE---HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCC---cHHHHH---HHHHH-cCCCeEeecC--cccCceE---HHHHHHH
Confidence            776666555443444558899999999995322   222222   11111 2445555554  3444554   4555888


Q ss_pred             HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCC
Q 015961          260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  339 (397)
Q Consensus       260 ~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (397)
                      ++.++.++.  +++||+++++.+|+.|+++.+++.+|.+...            .+.+..++               ...
T Consensus       198 ~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~------------~~~~~~~~---------------~~~  248 (287)
T 3sc6_A          198 INKLIHTSL--YGTYHVSNTGSCSWFEFAKKIFSYANMKVNV------------LPVSTEEF---------------GAA  248 (287)
T ss_dssp             HHHHHTSCC--CEEEECCCBSCEEHHHHHHHHHHHHTCCCEE------------EEECHHHH---------------CCS
T ss_pred             HHHHHhCCC--CCeEEEcCCCcccHHHHHHHHHHHcCCCcce------------eeeehhhc---------------Ccc
Confidence            888776654  7799999999999999999999999986432            12222211               000


Q ss_pred             cccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhc
Q 015961          340 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                      ..   +            ..+..+|++|++++||+|.++++|+|+++++|+++
T Consensus       249 ~~---~------------~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          249 AA---R------------PKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             SC---C------------CSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred             cC---C------------CCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence            00   0            01456899999988999999999999999999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-35  Score=274.77  Aligned_cols=304  Identities=14%  Similarity=0.115  Sum_probs=207.7

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHH
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      -++++++++|||||||||||++|+++|++     +|++|++++|++....       ....+++++.+|++|.+++.+++
T Consensus         8 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   82 (335)
T 1rpn_A            8 HHHGSMTRSALVTGITGQDGAYLAKLLLE-----KGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAV   82 (335)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHH
T ss_pred             ccccccCCeEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHH
Confidence            34677889999999999999999999998     7999999999764311       01246889999999999999998


Q ss_pred             cc--CCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961           93 SQ--LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  168 (397)
Q Consensus        93 ~~--~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E  168 (397)
                      ++  +|.|+|+|+.....  ..++...+++|+.++.+++++|++.+. ..+++++||..+|+..         ...+++|
T Consensus        83 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~v~~SS~~v~g~~---------~~~~~~E  152 (335)
T 1rpn_A           83 IKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMFGLI---------QAERQDE  152 (335)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGGCSC---------SSSSBCT
T ss_pred             HHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeCHHHhCCC---------CCCCCCc
Confidence            86  58899997643321  236778899999999999999988641 2788888876555432         1346788


Q ss_pred             CCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHH-HHHHHHH-HhhhcCC-CceecCC
Q 015961          169 DMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVG-ALCVYAA-VCKHEGI-PLRFPGT  240 (397)
Q Consensus       169 ~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~-i~~~~~~-~~~~~g~  240 (397)
                      ++|..|...  |+.     |+++..+. ++.+++++++||+.+||+..  ..++.. .+..++. +.  .+. +....|+
T Consensus       153 ~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~r~~~v~Gp~~--~~~~~~~~~~~~~~~~~--~g~~~~~~~g~  225 (335)
T 1rpn_A          153 NTPFYPRSP--YGVAKLYGHWITVNYR-ESFGLHASSGILFNHESPLR--GIEFVTRKVTDAVARIK--LGKQQELRLGN  225 (335)
T ss_dssp             TSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTS--CTTSHHHHHHHHHHHHH--TTSCSCEEESC
T ss_pred             ccCCCCCCh--hHHHHHHHHHHHHHHH-HHcCCcEEEEeeCcccCCCC--CCCcchHHHHHHHHHHH--cCCCceEEeCC
Confidence            887665433  664     55555443 45589999999999999532  222211 1211111 11  233 3344566


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961          241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  320 (397)
Q Consensus       241 ~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
                      +.+.+.++++.|   +|++++.++..+.  +++||+++++.+|++|+++.+.+.+|.+....           .++..  
T Consensus       226 g~~~~~~i~v~D---va~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-----------~~~~~--  287 (335)
T 1rpn_A          226 VDAKRDWGFAGD---YVEAMWLMLQQDK--ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDF-----------LKIDP--  287 (335)
T ss_dssp             TTCEEECEEHHH---HHHHHHHHHHSSS--CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGT-----------EEECG--
T ss_pred             CcceeceEEHHH---HHHHHHHHHhcCC--CCEEEEeCCCCccHHHHHHHHHHHhCCCcccc-----------ccccc--
Confidence            666666665555   5788777776543  47899999999999999999999999753210           00000  


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                     ....+..               .....+|++|+++ |||+|.++++|+|+++++|+++.
T Consensus       288 ---------------~~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  331 (335)
T 1rpn_A          288 ---------------AFFRPAE---------------VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR  331 (335)
T ss_dssp             ---------------GGCCSSC---------------CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ---------------cccCCCc---------------chhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence                           0000000               0134579999986 79999999999999999999763

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1.2e-34  Score=271.32  Aligned_cols=299  Identities=16%  Similarity=0.122  Sum_probs=209.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~  101 (397)
                      +..++|||||||||||++|+++|++     +|++|++++|++....   .+++++.+|++|++++.+++++  +|.|+|+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   81 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTE-----QNVEVFGTSRNNEAKL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHL   81 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCTTCCC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHH-----CCCEEEEEecCCcccc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEc
Confidence            3457999999999999999999998     8999999999865421   2788999999999999999887  8889999


Q ss_pred             EEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcc
Q 015961          102 FYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  179 (397)
Q Consensus       102 a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~  179 (397)
                      |+.....  ..++...+++|+.|+.+++++|++.. ++.+++++||..+|+..       .+...+++|++|..|...  
T Consensus        82 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~-------~~~~~~~~E~~~~~~~~~--  151 (321)
T 2pk3_A           82 AAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSN-LDCRILTIGSSEEYGMI-------LPEESPVSEENQLRPMSP--  151 (321)
T ss_dssp             CSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CCCEEEEEEEGGGTBSC-------CGGGCSBCTTSCCBCCSH--
T ss_pred             CcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEccHHhcCCC-------CCCCCCCCCCCCCCCCCc--
Confidence            7643321  23577889999999999999997642 47889988876666431       001457788887655433  


Q ss_pred             hhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhh-hcC--CCceecCCccccceeeecc
Q 015961          180 YTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK-HEG--IPLRFPGTKAAWECYSIAS  251 (397)
Q Consensus       180 y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~-~~~--~~~~~~g~~~~~~~~~~~~  251 (397)
                      |+.     |+++..+. ++.|++++++||++|||+.... ..+...+...  +.+ ..+  .++...+++.+...++++.
T Consensus       152 Y~~sK~~~E~~~~~~~-~~~gi~~~ilrp~~v~g~~~~~-~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~v~v~  227 (321)
T 2pk3_A          152 YGVSKASVGMLARQYV-KAYGMDIIHTRTFNHIGPGQSL-GFVTQDFAKQ--IVDIEMEKQEPIIKVGNLEAVRDFTDVR  227 (321)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECTTCCT-TSHHHHHHHH--HHHHHTTSSCSEEEESCSSCEEEEEEHH
T ss_pred             cHHHHHHHHHHHHHHH-HHcCCCEEEEEeCcccCcCCCC-CchHHHHHHH--HHHHhcCCCCCeEEeCCCCcEEeeEEHH
Confidence            664     45554443 4458999999999999953321 1122222111  111 114  4555566666555566555


Q ss_pred             cHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHH
Q 015961          252 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  331 (397)
Q Consensus       252 da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (397)
                      |   +|.+++.++..+ ..+++||++++..+|++|+++.+.+.+|.+.....          .|.    +          
T Consensus       228 D---va~a~~~~~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~p~----~----------  279 (321)
T 2pk3_A          228 D---IVQAYWLLSQYG-KTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTEL----------NPL----Q----------  279 (321)
T ss_dssp             H---HHHHHHHHHHHC-CTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEE----------CGG----G----------
T ss_pred             H---HHHHHHHHHhCC-CCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceee----------ccc----c----------
Confidence            5   477777776554 45789999999999999999999999997532210          000    0          


Q ss_pred             HHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          332 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                            ..+..               ..+..+|++|+++ |||+|.++++|+|+++++|++++
T Consensus       280 ------~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  321 (321)
T 2pk3_A          280 ------LRPSE---------------VPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQA  321 (321)
T ss_dssp             ------CCSSC---------------CSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred             ------CCCcc---------------cchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhcC
Confidence                  00000               0145689999987 69999999999999999999863

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=7e-35  Score=271.69  Aligned_cols=292  Identities=18%  Similarity=0.202  Sum_probs=205.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHc--cCCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~a~  103 (397)
                      |+|||||||||||++|+++|++     +|++|++++|...... ....+++++.+|++|++++.++++  ++|.|+|+|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLA-----RGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHT-----TTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHH-----CCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            3799999999999999999999     8999999998543211 111467899999999999998888  7888999976


Q ss_pred             ecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCC-ccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961          104 VTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT-KHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  180 (397)
Q Consensus       104 ~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~-~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y  180 (397)
                      .....  ..++...+++|+.|+.+++++|++.+  +++++++||. .+|+.       . ....+.+|++|..|...  |
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iv~~SS~~~~~g~-------~-~~~~~~~E~~~~~~~~~--Y  143 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG--VEKLVFASTGGAIYGE-------V-PEGERAEETWPPRPKSP--Y  143 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEHHHHHCC-------C-CTTCCBCTTSCCCCCSH--H
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCEEEEeCCChhhcCC-------C-CCCCCcCCCCCCCCCCh--H
Confidence            43221  12567788999999999999998753  6788888865 54532       0 01356778877655433  6


Q ss_pred             hH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--chhHHHHHHHHHHhhhcCCCceec-----CCccccceee
Q 015961          181 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--MNLVGALCVYAAVCKHEGIPLRFP-----GTKAAWECYS  248 (397)
Q Consensus       181 ~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~-----g~~~~~~~~~  248 (397)
                      +.     |+++..+. ++.+++++++||++|||+.....  ..+...+..  .+.  .+.++...     |++.+.+.++
T Consensus       144 ~~sK~~~e~~~~~~~-~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~g~~~~~~i  218 (311)
T 2p5y_A          144 AASKAAFEHYLSVYG-QSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAE--RVL--KGLPVTLYARKTPGDEGCVRDYV  218 (311)
T ss_dssp             HHHHHHHHHHHHHHH-HHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHH--HHH--HTCCEEEECSSSTTSCCCEECEE
T ss_pred             HHHHHHHHHHHHHHH-HHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHH--HHH--cCCCcEEEecccCCCCCeEEeeE
Confidence            64     55555443 45689999999999999543211  111111111  111  24554444     6666656666


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHH
Q 015961          249 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  328 (397)
Q Consensus       249 ~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (397)
                      ++.|+   |.+++.++..+   +++||++++..+|++|+++.+++.+|.+.....          .+.            
T Consensus       219 ~v~Dv---a~a~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~------------  270 (311)
T 2p5y_A          219 YVGDV---AEAHALALFSL---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQP----------APP------------  270 (311)
T ss_dssp             EHHHH---HHHHHHHHHHC---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEE----------ECC------------
T ss_pred             EHHHH---HHHHHHHHhCC---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCcee----------CCC------------
Confidence            65554   77777766543   789999999999999999999999997643210          000            


Q ss_pred             HHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          329 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                .+...               ....+|++|++++||+|.++++|+|+++++|++++
T Consensus       271 ----------~~~~~---------------~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~  310 (311)
T 2p5y_A          271 ----------RPGDL---------------ERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGA  310 (311)
T ss_dssp             ----------CTTCC---------------SBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHTC
T ss_pred             ----------Cccch---------------hhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHhh
Confidence                      00000               13458999998899999999999999999999864

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=8.6e-35  Score=275.87  Aligned_cols=297  Identities=16%  Similarity=0.117  Sum_probs=211.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CC----------CCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NA----------DHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~----------~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +++|||||||||||++|+++|++     .|++|++++|++....  ..          ..+++++.+|++|.+++.++++
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLK-----LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence            47899999999999999999998     8999999999754210  00          1578899999999999999999


Q ss_pred             cCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      ++|.|+|+|+.....  ..++...+++|+.++.+++++|++.  ++++|+++||..+|+..         ...+++|+++
T Consensus       102 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~---------~~~~~~E~~~  170 (352)
T 1sb8_A          102 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDH---------PGLPKVEDTI  170 (352)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTC---------CCSSBCTTCC
T ss_pred             CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCC---------CCCCCCCCCC
Confidence            999999997643211  1256778899999999999999875  37889988876665432         1356788887


Q ss_pred             CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc---chhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961          172 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  243 (397)
                      ..|..  .|+.     |+++..+. ++.+++++++||+.|||+.....   ..+...+..  .+.  .+.++.++|++.+
T Consensus       171 ~~~~~--~Y~~sK~~~e~~~~~~~-~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~g~g~~  243 (352)
T 1sb8_A          171 GKPLS--PYAVTKYVNELYADVFS-RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTS--SMI--QGDDVYINGDGET  243 (352)
T ss_dssp             CCCCS--HHHHHHHHHHHHHHHHH-HHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHH--HHH--HTCCCEEESSSCC
T ss_pred             CCCCC--hhHHHHHHHHHHHHHHH-HHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHH--HHH--CCCCcEEeCCCCc
Confidence            65543  3664     55555443 45589999999999999543211   122222211  112  2556566777766


Q ss_pred             cceeeecccHHHHHHHHHHHhcC-CCCCCCceeccCCCeeehHHHHHHHHHHh---CCCCCCCCchhhcCCCCccccCHH
Q 015961          244 WECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWKHLWKVLAEQF---GIEDYGLSEEEEEGGGGTQRVKLA  319 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~-~~~~g~~yni~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~  319 (397)
                      .+.++++.|   +|++++.++.. +...+++||+++++.+|++|+++.+++.+   |.+....+.          ..   
T Consensus       244 ~~~~i~v~D---va~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~----------~~---  307 (352)
T 1sb8_A          244 SRDFCYIEN---TVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV----------YR---  307 (352)
T ss_dssp             EECCEEHHH---HHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCE----------EE---
T ss_pred             eEeeEEHHH---HHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCce----------ec---
Confidence            666666555   47777776654 23568899999999999999999999999   876432110          00   


Q ss_pred             HHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          320 EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                       ...+..               ..+..+|++|+++ +||+|.++++|+|+++++||+++
T Consensus       308 -----------------~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          308 -----------------DFREGD---------------VRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             -----------------CCCTTC---------------CSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCccc---------------hhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence                             000000               0134579999986 79999999999999999999753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.3e-34  Score=272.08  Aligned_cols=295  Identities=15%  Similarity=0.095  Sum_probs=207.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHHHHc--cCCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~a~  103 (397)
                      |+|||||||||||++|+++|++     .|++|++++|....... ...+++++.+|++|.+++.++++  ++|.|+|+|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~   76 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVD-----EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAA   76 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHh-----CCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCc
Confidence            6899999999999999999998     79999999997543210 11378899999999999999998  7888999976


Q ss_pred             ecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh
Q 015961          104 VTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  181 (397)
Q Consensus       104 ~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~  181 (397)
                      .....  ..++...+++|+.++.+++++|++.+  +++++++||..+|+..         ...+++|++|..|...  |+
T Consensus        77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~Ss~~~~~~~---------~~~~~~E~~~~~~~~~--Y~  143 (330)
T 2c20_A           77 DSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK--VDKFIFSSTAATYGEV---------DVDLITEETMTNPTNT--YG  143 (330)
T ss_dssp             CCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGGCSC---------SSSSBCTTSCCCCSSH--HH
T ss_pred             ccCccccccCHHHHHHHHhHHHHHHHHHHHHcC--CCEEEEeCCceeeCCC---------CCCCCCcCCCCCCCCh--HH
Confidence            43221  12567788999999999999998753  7889988876655432         2457788887655433  65


Q ss_pred             H-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC--------cchhHHHHHHHHHHhhhcCCCceecC------Ccc
Q 015961          182 L-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS--------LMNLVGALCVYAAVCKHEGIPLRFPG------TKA  242 (397)
Q Consensus       182 ~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~g------~~~  242 (397)
                      .     |+++..+. ++.+++++++||+.|||+.+..        ..++...+   .....+.+.++.+.|      ++.
T Consensus       144 ~sK~~~e~~~~~~~-~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~g~  219 (330)
T 2c20_A          144 ETKLAIEKMLHWYS-QASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLV---LQVALGQREKIMMFGDDYNTPDGT  219 (330)
T ss_dssp             HHHHHHHHHHHHHH-HTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHH---HHHHTTSSSCEEEECSCCSSSSSS
T ss_pred             HHHHHHHHHHHHHH-HHhCCcEEEEecCcccCCCCcCccccccccccchHHHH---HHHHhhcCCCeEEeCCccccCCCc
Confidence            4     55555554 5568999999999999964321        11222222   111122233455554      444


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  320 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
                      +.+.++++.|+   |++++.++..+.  ..+++||+++++.+|++|+++.+++.+|.+.+...            .+   
T Consensus       220 ~~~~~v~v~Dv---a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~------------~~---  281 (330)
T 2c20_A          220 CIRDYIHVEDL---VAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEV------------AP---  281 (330)
T ss_dssp             CEECEEEHHHH---HHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEE------------EC---
T ss_pred             eeEeeEeHHHH---HHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceee------------CC---
Confidence            45555555554   777666655432  23689999999999999999999999997633210            00   


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCcc-CCHHHHHHHHHHHhcC
Q 015961          321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVKGF  393 (397)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~e~~~~~~~~~~~~  393 (397)
                                       ....   .            .....+|++|+++ |||+|.+ +++|+|+++++|++++
T Consensus       282 -----------------~~~~---~------------~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~  324 (330)
T 2c20_A          282 -----------------RRAG---D------------PARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQ  324 (330)
T ss_dssp             -----------------CCSS---C------------CSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHC
T ss_pred             -----------------CCCC---c------------ccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHh
Confidence                             0000   0            0134589999985 7999998 9999999999999876

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=6.5e-35  Score=268.71  Aligned_cols=273  Identities=18%  Similarity=0.166  Sum_probs=203.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc-CCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-LTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-~~~V~h~a~~~  105 (397)
                      ++||||| +||||++|+++|++     .|++|++++|++...   .++++++.+|++|.+++.+++++ +|.|+|+|+..
T Consensus         4 ~~ilVtG-aG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~   74 (286)
T 3gpi_A            4 SKILIAG-CGDLGLELARRLTA-----QGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAAS   74 (286)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred             CcEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence            6899999 59999999999998     899999999986542   26899999999999999888888 89999997542


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  185 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~  185 (397)
                         ..++...+++|+.++.+++++|++.  ++++|+++||..+|+..         ...+++|++|..|..  .|+..|.
T Consensus        75 ---~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~---------~~~~~~E~~~~~p~~--~Y~~sK~  138 (286)
T 3gpi_A           75 ---EYSDEHYRLSYVEGLRNTLSALEGA--PLQHVFFVSSTGVYGQE---------VEEWLDEDTPPIAKD--FSGKRML  138 (286)
T ss_dssp             ---HHC-----CCSHHHHHHHHHHTTTS--CCCEEEEEEEGGGCCCC---------CSSEECTTSCCCCCS--HHHHHHH
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHhhC--CCCEEEEEcccEEEcCC---------CCCCCCCCCCCCCCC--hhhHHHH
Confidence               2355677899999999999999974  47899988876655432         245678888876643  4888888


Q ss_pred             HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 015961          186 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  265 (397)
Q Consensus       186 l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~  265 (397)
                      ..+.. ... ++++++||+.|||+  +.. .+...+      .   . . ..++.+.+...++++.|   +|++++.++.
T Consensus       139 ~~E~~-~~~-~~~~ilR~~~v~G~--~~~-~~~~~~------~---~-~-~~~~~~~~~~~~i~v~D---va~~~~~~~~  199 (286)
T 3gpi_A          139 EAEAL-LAA-YSSTILRFSGIYGP--GRL-RMIRQA------Q---T-P-EQWPARNAWTNRIHRDD---GAAFIAYLIQ  199 (286)
T ss_dssp             HHHHH-GGG-SSEEEEEECEEEBT--TBC-HHHHHT------T---C-G-GGSCSSBCEECEEEHHH---HHHHHHHHHH
T ss_pred             HHHHH-Hhc-CCeEEEecccccCC--Cch-hHHHHH------H---h-c-ccCCCcCceeEEEEHHH---HHHHHHHHHh
Confidence            87776 555 99999999999994  322 111111      1   1 1 22355555555655555   4777777776


Q ss_pred             CC--CCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccc
Q 015961          266 DP--YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL  343 (397)
Q Consensus       266 ~~--~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (397)
                      .+  ...+++||+++++.+|+.|+++.+++.+|.+.+....                                   +.. 
T Consensus       200 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------------------------------~~~-  243 (286)
T 3gpi_A          200 QRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGAT-----------------------------------PPV-  243 (286)
T ss_dssp             HHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCC-----------------------------------CCB-
T ss_pred             hhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCC-----------------------------------ccc-
Confidence            54  5668999999999999999999999999986543110                                   000 


Q ss_pred             cccccchhhhhhhcCcccccchhhHHHcCCCCcc-CCHHHHHHHHHHHhcC
Q 015961          344 DEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFR-NSKNSFITWIDKVKGF  393 (397)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~-~~~e~~~~~~~~~~~~  393 (397)
                                    ..+..+|++|++++||+|++ +++|+|+++++|+...
T Consensus       244 --------------~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~~  280 (286)
T 3gpi_A          244 --------------QGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMREG  280 (286)
T ss_dssp             --------------CSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC-
T ss_pred             --------------CCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhcc
Confidence                          01445899999988999999 6999999999998753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.6e-34  Score=273.41  Aligned_cols=298  Identities=14%  Similarity=0.089  Sum_probs=207.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC------CCC--------CCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP------NWN--------ADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~------~~~--------~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      |+|+|||||||||||++|+++|++     .|++|++++|....      ...        ...+++++.+|++|.+++.+
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   75 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLE-----AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR   75 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHH-----TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHH
Confidence            678999999999999999999998     79999999986432      100        02468899999999999999


Q ss_pred             HHc--cCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           91 KLS--QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        91 ~~~--~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      +++  ++|.|+|+|+.....  ..++.+.+++|+.++.+++++|++.+  +++|+++||..+|+..         ...++
T Consensus        76 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~g~~---------~~~~~  144 (348)
T 1ek6_A           76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVYGNP---------QYLPL  144 (348)
T ss_dssp             HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGGCSC---------SSSSB
T ss_pred             HHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHhCCC---------CCCCc
Confidence            988  788899997643211  12567788999999999999998753  6789988876655431         24577


Q ss_pred             CCCCCCCCCCCcchhH-----HHHHHHHHhcC-CCeeEEEEcCCceeeccCCC---------cchhHHHHHHHHHHhhhc
Q 015961          167 TEDMPRLDAPNFYYTL-----EDILFEEVEKK-EELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~-----e~~l~~~~~~~-~g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~~  231 (397)
                      +|+++..|. ...|+.     |+++..+. ++ .+++++++||++|||+.+..         ..++...+   .....+.
T Consensus       145 ~E~~~~~p~-~~~Y~~sK~~~e~~~~~~~-~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~---~~~~~~~  219 (348)
T 1ek6_A          145 DEAHPTGGC-TNPYGKSKFFIEEMIRDLC-QADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYV---SQVAIGR  219 (348)
T ss_dssp             CTTSCCCCC-SSHHHHHHHHHHHHHHHHH-HHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH---HHHHHTS
T ss_pred             CCCCCCCCC-CCchHHHHHHHHHHHHHHH-hcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHH---HHHHHhc
Confidence            888876552 223664     55555543 33 34999999999999964311         12222222   1112223


Q ss_pred             CCCceecC------CccccceeeecccHHHHHHHHHHHhcCCC-CCC-CceeccCCCeeehHHHHHHHHHHhCCCCCCCC
Q 015961          232 GIPLRFPG------TKAAWECYSIASDADLIAEHQIWAAVDPY-AKN-EAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLS  303 (397)
Q Consensus       232 ~~~~~~~g------~~~~~~~~~~~~da~~la~~~~~~~~~~~-~~g-~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~  303 (397)
                      +.++.+.|      ++.+.+.++|+.|   +|.+++.++..+. ..+ ++||+++++.+|++|+++.+++.+|.+.+...
T Consensus       220 ~~~~~~~g~~~~~~~g~~~~~~i~v~D---va~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~  296 (348)
T 1ek6_A          220 REALNVFGNDYDTEDGTGVRDYIHVVD---LAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV  296 (348)
T ss_dssp             SSCEEEECSCSSSSSSSCEECEEEHHH---HHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCeEEeCCcccCCCCceEEeeEEHHH---HHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceee
Confidence            44555554      3444555555555   4777776665432 344 89999999999999999999999997633210


Q ss_pred             chhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHH
Q 015961          304 EEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNS  382 (397)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~  382 (397)
                                  .+                    ....   .            .....+|++|+++ |||+|.++++|+
T Consensus       297 ------------~~--------------------~~~~---~------------~~~~~~d~~k~~~~lG~~p~~~l~~~  329 (348)
T 1ek6_A          297 ------------VA--------------------RREG---D------------VAACYANPSLAQEELGWTAALGLDRM  329 (348)
T ss_dssp             ------------EC--------------------CCTT---C------------CSEECBCCHHHHHTTCCCCCCCHHHH
T ss_pred             ------------CC--------------------CCCc---c------------chhhccCHHHHHHhcCCCCCCCHHHH
Confidence                        00                    0000   0            0134589999975 799999999999


Q ss_pred             HHHHHHHHhcC
Q 015961          383 FITWIDKVKGF  393 (397)
Q Consensus       383 ~~~~~~~~~~~  393 (397)
                      |+++++|++++
T Consensus       330 l~~~~~w~~~~  340 (348)
T 1ek6_A          330 CEDLWRWQKQN  340 (348)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhc
Confidence            99999999875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=7.5e-34  Score=267.01  Aligned_cols=291  Identities=13%  Similarity=0.074  Sum_probs=205.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHHHc--cCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS--QLTD   97 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~   97 (397)
                      +..+|+|||||||||||++|+++|++     .|++|++++|+.....   ....+++++.+|++|.+++.++++  ++|.
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLP-----QGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGG-----GTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            44567999999999999999999998     8999999999653321   112578899999999999999998  8999


Q ss_pred             eeEEEEecccC-CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN-RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  176 (397)
Q Consensus        98 V~h~a~~~~~~-~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~  176 (397)
                      |+|+|+..... ..++.  +++|+.++.+++++|.+.+  +.+|+++||..+|+..       ...+.+++|++  .+  
T Consensus        92 vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~--~~~iV~~SS~~~~~~~-------~~~~~~~~E~~--~~--  156 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKAG--VKRLLNFQTALCYGRP-------ATVPIPIDSPT--AP--  156 (330)
T ss_dssp             EEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHHT--CSEEEEEEEGGGGCSC-------SSSSBCTTCCC--CC--
T ss_pred             EEECCccCCCccccChh--HHHHHHHHHHHHHHHHHcC--CCEEEEecCHHHhCCC-------ccCCCCcCCCC--CC--
Confidence            99998754332 12333  8999999999999998754  6789988876655421       00011667766  22  


Q ss_pred             CcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHH
Q 015961          177 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLI  256 (397)
Q Consensus       177 ~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~l  256 (397)
                      ...|+..|...+.+.+..+++++++||+++||++  ...++...+..  .+.+  +.  ...+++. ...+++   ++++
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~--~~~~~~~~~~~--~~~~--~~--~~~~~~~-~~~~i~---~~Dv  224 (330)
T 2pzm_A          157 FTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPR--LAIGPIPTFYK--RLKA--GQ--KCFCSDT-VRDFLD---MSDF  224 (330)
T ss_dssp             CSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTT--CCSSHHHHHHH--HHHT--TC--CCCEESC-EECEEE---HHHH
T ss_pred             CChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcC--CCCCHHHHHHH--HHHc--CC--EEeCCCC-Eeccee---HHHH
Confidence            2348887777766545568999999999999954  32222222211  1112  22  2233333 344444   4455


Q ss_pred             HH-HHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHH
Q 015961          257 AE-HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRE  335 (397)
Q Consensus       257 a~-~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (397)
                      |. +++.++..+.  +++||++++..+|++|+++.+++.+|.+ ....          .+..                  
T Consensus       225 a~~a~~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~----------~~~~------------------  273 (330)
T 2pzm_A          225 LAIADLSLQEGRP--TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEP----------VPVV------------------  273 (330)
T ss_dssp             HHHHHHHTSTTCC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSC----------CCEE------------------
T ss_pred             HHHHHHHHhhcCC--CCEEEeCCCCCCCHHHHHHHHHHHhCCC-Ccee----------CCCC------------------
Confidence            88 7777665543  8999999999999999999999999987 2110          0000                  


Q ss_pred             hCCCcccccccccchhhhhhhcCcccccchhhH-----HHcCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961          336 NQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKS-----KEHGFSGFRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~lG~~p~~~~~e~~~~~~~~~~~~~~~  396 (397)
                            .  ..            ....+|++|+     +++||+|.++++|+|+++++|+++.|++
T Consensus       274 ------~--~~------------~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~  319 (330)
T 2pzm_A          274 ------A--PG------------ADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGVT  319 (330)
T ss_dssp             ------C--CC------------TTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred             ------c--ch------------hhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhCcc
Confidence                  0  00            0334688888     8899999999999999999999999886

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=9.3e-35  Score=271.04  Aligned_cols=292  Identities=18%  Similarity=0.141  Sum_probs=204.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~  101 (397)
                      .++++|||||||||||++|+++|++     .|+      +...    ....++++.+|++|++++.+++++  +|.|+|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~------~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~   68 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVAD-----GAG------LPGE----DWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL   68 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHT-----TTC------CTTC----EEEECCTTTCCTTSHHHHHHHHHHSCCSEEEEC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHh-----cCC------cccc----cccccCceecccCCHHHHHHHHhhcCCCEEEEC
Confidence            3458999999999999999999998     677      2111    112445568999999999999988  8889999


Q ss_pred             EEeccc---CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC----CCCC
Q 015961          102 FYVTWT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM----PRLD  174 (397)
Q Consensus       102 a~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~----p~~~  174 (397)
                      |+....   ...++.+.+++|+.|+.+++++|++.+  +++++++||..+|+..         ...|++|++    +..|
T Consensus        69 A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~v~~SS~~vyg~~---------~~~~~~E~~~~~~~~~p  137 (319)
T 4b8w_A           69 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG--ARKVVSCLSTCIFPDK---------TTYPIDETMIHNGPPHN  137 (319)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSCSS---------CCSSBCGGGGGBSCCCS
T ss_pred             ceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEcchhhcCCC---------CCCCccccccccCCCCC
Confidence            875321   224677889999999999999999864  7899988876655421         245778876    3333


Q ss_pred             CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc---chhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961          175 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  246 (397)
Q Consensus       175 ~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  246 (397)
                      . .+.|+.     |+++..+. ++.+++++++||++|||+.....   ..+...+...+......+.++.++|++.+.+.
T Consensus       138 ~-~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  215 (319)
T 4b8w_A          138 S-NFGYSYAKRMIDVQNRAYF-QQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQ  215 (319)
T ss_dssp             S-SHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEEC
T ss_pred             C-cchHHHHHHHHHHHHHHHH-HhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEE
Confidence            2 223664     55555544 55689999999999999543211   12222221111000123667777787777666


Q ss_pred             eeecccHHHHHHHHHHHhcCC-CCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961          247 YSIASDADLIAEHQIWAAVDP-YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~-~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      ++++.|+   |++++.++..+ ...+++||+++++.+|+.|+++.+.+.+|.+......          +.         
T Consensus       216 ~i~v~Dv---a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~----------~~---------  273 (319)
T 4b8w_A          216 FIYSLDL---AQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFD----------TT---------  273 (319)
T ss_dssp             EEEHHHH---HHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEE----------TT---------
T ss_pred             EEeHHHH---HHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeC----------CC---------
Confidence            7666655   77777777653 3457799999999999999999999999976432100          00         


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                   .+..               .....+|++|+++ |||.|.++++|+|+++++|+++.
T Consensus       274 -------------~~~~---------------~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~  314 (319)
T 4b8w_A          274 -------------KSDG---------------QFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDN  314 (319)
T ss_dssp             -------------SCCC---------------CSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred             -------------CCcC---------------cccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence                         0000               0134589999997 79999999999999999999875

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=9e-34  Score=271.54  Aligned_cols=298  Identities=12%  Similarity=0.020  Sum_probs=209.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~  103 (397)
                      ++++|||||||||||++|+++|++     +|++|++++|++..... ...+++++.+|++|.+++.++++++|.|+|+|+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~  102 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKH-----EGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA  102 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHH-----CCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence            347999999999999999999998     79999999998654321 124789999999999999999999999999987


Q ss_pred             ecccC---CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC--CCCCCCCc
Q 015961          104 VTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM--PRLDAPNF  178 (397)
Q Consensus       104 ~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~--p~~~~~~~  178 (397)
                      .....   ..++.+.+++|+.++.+++++|++.+  +++|+++||..+|+....  .  .+...+++|++  +..|  ..
T Consensus       103 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~--~~~~V~~SS~~v~~~~~~--~--~~~~~~~~E~~~~~~~~--~~  174 (379)
T 2c5a_A          103 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARING--IKRFFYASSACIYPEFKQ--L--ETTNVSLKESDAWPAEP--QD  174 (379)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEEEGGGSCGGGS--S--SSSSCEECGGGGSSBCC--SS
T ss_pred             ecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeehheeCCCCC--C--CccCCCcCcccCCCCCC--CC
Confidence            53221   34678889999999999999998753  778999988766653210  0  00123466665  3333  23


Q ss_pred             chhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc---hhHHHHHHHHHHhhhcCCC-ceecCCccccceeee
Q 015961          179 YYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIP-LRFPGTKAAWECYSI  249 (397)
Q Consensus       179 ~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~-~~~~g~~~~~~~~~~  249 (397)
                      .|+.     |+++..+. ++.+++++++||+.|||+......   .....+..  .+.  .+.+ +.++|++.+.+.+++
T Consensus       175 ~Y~~sK~~~E~~~~~~~-~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~g~g~~~~~~i~  249 (379)
T 2c5a_A          175 AFGLEKLATEELCKHYN-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCR--KAQ--TSTDRFEMWGDGLQTRSFTF  249 (379)
T ss_dssp             HHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHH--HHH--HCSSCEEEESCSCCEECCEE
T ss_pred             hhHHHHHHHHHHHHHHH-HHHCCCEEEEEeCceeCcCCCcccccccHHHHHHH--HHH--hCCCceEEeCCCCeeEEEEE
Confidence            3664     55555443 456899999999999995432111   12222211  111  2444 566677666666655


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHH
Q 015961          250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW  329 (397)
Q Consensus       250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (397)
                      +.|   +|.+++.++..+  .+++||+++++.+|++|+++.+.+.+|.+....            ..+.           
T Consensus       250 v~D---va~ai~~~l~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~------------~~p~-----------  301 (379)
T 2c5a_A          250 IDE---CVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH------------HIPG-----------  301 (379)
T ss_dssp             HHH---HHHHHHHHHHSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE------------EECC-----------
T ss_pred             HHH---HHHHHHHHhhcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCcee------------eCCC-----------
Confidence            554   578877777654  578999999999999999999999999764321            0000           


Q ss_pred             HHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          330 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                  +. .            .....+|++|+++ |||+|.++++|+|+++++|++++
T Consensus       302 ------------~~-~------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  341 (379)
T 2c5a_A          302 ------------PE-G------------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ  341 (379)
T ss_dssp             ------------CC-C------------CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ------------CC-C------------cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence                        00 0            0023579999986 79999999999999999999754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=7.2e-34  Score=267.67  Aligned_cols=294  Identities=14%  Similarity=0.114  Sum_probs=206.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ++|||||||||||++|+++|++     +|  ++|++++|.....       .....+++++.+|++|.+++.+++.++|.
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~-----~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   78 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILE-----KHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDG   78 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----HCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHH-----hCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCE
Confidence            5899999999999999999998     54  8999999964211       11134788999999999999999999999


Q ss_pred             eeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        98 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      |+|+|+.....  ..++...+++|+.|+.+++++|.+.+ ...+|+++||..+|+..         ...+++|+.+..+.
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~---------~~~~~~E~~~~~~~  148 (336)
T 2hun_A           79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVYGDI---------LKGSFTENDRLMPS  148 (336)
T ss_dssp             EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCCC---------SSSCBCTTBCCCCC
T ss_pred             EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHHCCC---------CCCCcCCCCCCCCC
Confidence            99998753211  12567788999999999999999863 23688988876655432         13567888776554


Q ss_pred             CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeec
Q 015961          176 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIA  250 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~  250 (397)
                      ..  |+.     |+++..+. ++.+++++++||+.|||+... ...+...+..  .+.  .+.++.+.+++.+...++++
T Consensus       149 ~~--Y~~sK~~~e~~~~~~~-~~~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~i~v  220 (336)
T 2hun_A          149 SP--YSATKAASDMLVLGWT-RTYNLNASITRCTNNYGPYQF-PEKLIPKTII--RAS--LGLKIPIYGTGKNVRDWLYV  220 (336)
T ss_dssp             SH--HHHHHHHHHHHHHHHH-HHTTCEEEEEEECEEESTTCC-TTSHHHHHHH--HHH--TTCCEEEETC---CEEEEEH
T ss_pred             Cc--cHHHHHHHHHHHHHHH-HHhCCCEEEEeeeeeeCcCCC-cCchHHHHHH--HHH--cCCCceEeCCCCceeeeEEH
Confidence            33  664     55555544 457899999999999995321 1122222211  111  24556666776666666666


Q ss_pred             ccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHH
Q 015961          251 SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWE  330 (397)
Q Consensus       251 ~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (397)
                      .|+   |.+++.++.. ...|++||++++..+|++|+++.+++.+|.+.+.+..           .              
T Consensus       221 ~Dv---a~~~~~~~~~-~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------~--------------  271 (336)
T 2hun_A          221 EDH---VRAIELVLLK-GESREIYNISAGEEKTNLEVVKIILRLMGKGEELIEL-----------V--------------  271 (336)
T ss_dssp             HHH---HHHHHHHHHH-CCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEE-----------E--------------
T ss_pred             HHH---HHHHHHHHhC-CCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccc-----------c--------------
Confidence            554   7777766654 3467899999999999999999999999976332100           0              


Q ss_pred             HHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          331 EIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                               +.....            .....+|++|+++ |||+|.++++|+|+++++|+++.
T Consensus       272 ---------~~~~~~------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          272 ---------EDRPGH------------DLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             ---------CCCTTC------------CCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred             ---------CCCCCc------------hhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence                     000000            0134579999986 79999999999999999999865

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=6.5e-34  Score=272.33  Aligned_cols=295  Identities=15%  Similarity=0.093  Sum_probs=203.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      +|+|||||||||||++|+++|++     .| ++|++++|++...   .....+++++.+|++|++++.++++++|.|+|+
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~-----~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~  106 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLE-----LGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHL  106 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEEC
T ss_pred             CCEEEEECCccHHHHHHHHHHHH-----cCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEEC
Confidence            46899999999999999999998     78 9999999976432   111357899999999999999999999999999


Q ss_pred             EEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC--CCC---CC-C
Q 015961          102 FYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT--EDM---PR-L  173 (397)
Q Consensus       102 a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~--E~~---p~-~  173 (397)
                      |+.....  ..++.+.+++|+.++.+++++|++.. .+++|+++||..+|+..         ...+++  |+.   |. .
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~V~~SS~~vyg~~---------~~~~~~~~E~~~~~~~~~  176 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFK-RLKKVVYSAAGCSIAEK---------TFDDAKATEETDIVSLHN  176 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCS-SCCEEEEEEEC-----------------------CCCCCCCSSC
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHcCCC---------CCCCcCcccccccccccC
Confidence            7643221  12567788999999999999998751 37889988876655432         133566  776   44 3


Q ss_pred             CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCC--------Cc----chhHHHHHHHHHHhhhcCCCce
Q 015961          174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPY--------SL----MNLVGALCVYAAVCKHEGIPLR  236 (397)
Q Consensus       174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~--------~~----~~~~~~~~~~~~i~~~~~~~~~  236 (397)
                      |.  ..|+.     |+++..+. ++.+++++++||+.|||+...        ..    .++...+..  .+.  .+.++.
T Consensus       177 ~~--~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~--~g~~~~  249 (377)
T 2q1s_A          177 ND--SPYSMSKIFGEFYSVYYH-KQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIY--KAL--KGMPLP  249 (377)
T ss_dssp             CC--SHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHH--HHH--TTCCCC
T ss_pred             CC--CchHHHHHHHHHHHHHHH-HHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHH--HHH--cCCCeE
Confidence            33  23654     55555543 445899999999999995430        11    122222211  111  255555


Q ss_pred             ecCCccccceeeecccHHHHHHH-HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 015961          237 FPGTKAAWECYSIASDADLIAEH-QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR  315 (397)
Q Consensus       237 ~~g~~~~~~~~~~~~da~~la~~-~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~  315 (397)
                      ++|++.+.+.++++.|   +|++ ++.++..+. .| +||+++++.+|++|+++.+.+.+|.+.....          .+
T Consensus       250 ~~g~g~~~~~~i~v~D---va~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~p  314 (377)
T 2q1s_A          250 LENGGVATRDFIFVED---VANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNTELDR----------LP  314 (377)
T ss_dssp             CSGGGCCEECCEEHHH---HHHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCC----------CC
T ss_pred             EeCCCCeEEeeEEHHH---HHHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCcee----------CC
Confidence            6676666666665555   5888 777776644 56 9999999999999999999999998643211          11


Q ss_pred             cCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          316 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      ..                      +...   .           ....+|++|+++ |||+|.++++|+|+++++|++++
T Consensus       315 ~~----------------------~~~~---~-----------~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          315 KR----------------------PWDN---S-----------GKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             CC----------------------GGGC---C------------CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             CC----------------------cccc---c-----------cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence            00                      0000   0           034579999975 79999999999999999999865

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=9.8e-34  Score=266.57  Aligned_cols=295  Identities=13%  Similarity=0.094  Sum_probs=203.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHcc--CCCeeE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTH  100 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h  100 (397)
                      +++|||||||||||++|+++|++     +|++|++++|++...   .....+++++.+|++|.+++.+++++  +|.|+|
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih   95 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLE-----RGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVH   95 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHH-----CCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence            47899999999999999999998     799999999975432   11114788999999999999999988  999999


Q ss_pred             EEEecccCC-CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcc
Q 015961          101 IFYVTWTNR-STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  179 (397)
Q Consensus       101 ~a~~~~~~~-~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~  179 (397)
                      +|+...... .++.  +++|+.++.+++++|.+.+  +++|+++||..+|+..  .. ..  .. +++|++  .|. ...
T Consensus        96 ~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~--~~~iV~~SS~~~~g~~--~~-~~--~~-~~~E~~--~p~-~~~  162 (333)
T 2q1w_A           96 TAASYKDPDDWYND--TLTNCVGGSNVVQAAKKNN--VGRFVYFQTALCYGVK--PI-QQ--PV-RLDHPR--NPA-NSS  162 (333)
T ss_dssp             CCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGCSC--CC-SS--SB-CTTSCC--CCT-TCH
T ss_pred             CceecCCCccCChH--HHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHhCCC--cc-cC--CC-CcCCCC--CCC-CCc
Confidence            987543321 2333  8999999999999998853  6789988876655410  00 11  12 667765  232 134


Q ss_pred             hhHHHHHHHHHhcC-CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 015961          180 YTLEDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  258 (397)
Q Consensus       180 y~~e~~l~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  258 (397)
                      |+..|...+.+.+. .. +++++||+++||+.  ....+...+..  .+.+  +.+  +.+ +.+...+++   ++++|.
T Consensus       163 Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~--~~~~~~~~~~~--~~~~--~~~--~~~-~~~~~~~i~---v~Dva~  229 (333)
T 2q1w_A          163 YAISKSANEDYLEYSGL-DFVTFRLANVVGPR--NVSGPLPIFFQ--RLSE--GKK--CFV-TKARRDFVF---VKDLAR  229 (333)
T ss_dssp             HHHHHHHHHHHHHHHTC-CEEEEEESEEESTT--CCSSHHHHHHH--HHHT--TCC--CEE-EECEECEEE---HHHHHH
T ss_pred             hHHHHHHHHHHHHhhhC-CeEEEeeceEECcC--CcCcHHHHHHH--HHHc--CCe--eeC-CCceEeeEE---HHHHHH
Confidence            88766666654333 33 89999999999954  22222222211  1112  222  233 343444444   455588


Q ss_pred             HHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCC
Q 015961          259 HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQL  338 (397)
Q Consensus       259 ~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (397)
                      +++.++..+.  +++||++++..+|++|+++.+++.+|.+ ....          .+...                    
T Consensus       230 ai~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~----------~~~~~--------------------  276 (333)
T 2q1w_A          230 ATVRAVDGVG--HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPE----------PEIRE--------------------  276 (333)
T ss_dssp             HHHHHHTTCC--CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCC----------CEEEE--------------------
T ss_pred             HHHHHHhcCC--CCEEEeCCCCCccHHHHHHHHHHHhCCC-Ccee----------CCCCC--------------------
Confidence            8888776544  8899999999999999999999999987 2211          11100                    


Q ss_pred             CcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961          339 QPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                        ...   ..+        ..+..+|++|++++||+|.++++|+|+++++|+++.|++|
T Consensus       277 --~~~---~~~--------~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~~~  322 (333)
T 2q1w_A          277 --LGP---DDA--------PSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSG  322 (333)
T ss_dssp             --CCT---TSC--------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred             --ccc---ccc--------cccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHCCCC
Confidence              000   000        0145689999997799999999999999999999999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=7.5e-34  Score=268.84  Aligned_cols=301  Identities=11%  Similarity=0.046  Sum_probs=209.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCC----C--CCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPN----W--NADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~----~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      |+|||||||||||++|+++|++     .  |++|++++|.+...    .  ...++++++.+|++|.+++.++++++|.|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYN-----NHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAI   79 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHH-----HCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             cEEEEeCCccHHHHHHHHHHHH-----hCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEE
Confidence            6899999999999999999998     6  89999999965321    1  01257889999999999999999999999


Q ss_pred             eEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccccccc---ccCCCCCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFE---AFGKIKPYDPPFTEDMPRL  173 (397)
Q Consensus        99 ~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~---~~g~~~~~~~~~~E~~p~~  173 (397)
                      +|+|+.....  ..++...+++|+.++.+++++|.+.+  + +|+++||..+|+....   ..+.......+++|++|..
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~--~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (348)
T 1oc2_A           80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN  156 (348)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred             EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC--C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCC
Confidence            9997643211  12457788999999999999999864  4 8888888777753210   0000001125778887765


Q ss_pred             CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceee
Q 015961          174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYS  248 (397)
Q Consensus       174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~  248 (397)
                      +...  |+.     |+++..+. ++.+++++++||+.|||+... ..++...+..  .+.  .+.++.+.+++.+...++
T Consensus       157 ~~~~--Y~~sK~~~e~~~~~~~-~~~gi~~~ilrp~~v~G~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~i  228 (348)
T 1oc2_A          157 PSSP--YSSTKAASDLIVKAWV-RSFGVKATISNCSNNYGPYQH-IEKFIPRQIT--NIL--AGIKPKLYGEGKNVRDWI  228 (348)
T ss_dssp             CCSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEESTTCC-TTSHHHHHHH--HHH--HTCCCEEETTSCCEEECE
T ss_pred             CCCc--cHHHHHHHHHHHHHHH-HHhCCCEEEEeeceeeCCCCC-ccchHHHHHH--HHH--cCCCceEecCCCceEeeE
Confidence            5433  654     55555543 455899999999999995322 1122222211  111  245555566666555565


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHH
Q 015961          249 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  328 (397)
Q Consensus       249 ~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (397)
                      ++.|   +|.+++.++.. ...|++||++++..+|++|+++.+.+.+|.+.+.+..           .      .     
T Consensus       229 ~v~D---va~~~~~~~~~-~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------~------~-----  282 (348)
T 1oc2_A          229 HTND---HSTGVWAILTK-GRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH-----------V------T-----  282 (348)
T ss_dssp             EHHH---HHHHHHHHHHH-CCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEE-----------E------C-----
T ss_pred             EHHH---HHHHHHHHhhC-CCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcccccc-----------C------C-----
Confidence            5555   47777776654 3467899999999999999999999999976432110           0      0     


Q ss_pred             HHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccC-CHHHHHHHHHHHhcC
Q 015961          329 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRN-SKNSFITWIDKVKGF  393 (397)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~-~~e~~~~~~~~~~~~  393 (397)
                               ..+.               ......+|++|+++ |||+|.++ ++|+|+++++|+++.
T Consensus       283 ---------~~~~---------------~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          283 ---------DRAG---------------HDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN  325 (348)
T ss_dssp             ---------CCTT---------------CCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             ---------CCCC---------------cccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence                     0000               00134579999986 79999998 999999999999875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=7.2e-34  Score=267.80  Aligned_cols=293  Identities=13%  Similarity=0.118  Sum_probs=207.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCC---C---cEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGG---P---WKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~---g---~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      |+|||||||||||++|+++|++     +   |   ++|++++|.....       .....+++++.+|++|++++.+++.
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~-----~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLA-----GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR   75 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT
T ss_pred             CeEEEECCccHHHHHHHHHHHh-----hhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc
Confidence            3799999999999999999997     5   7   9999999964211       1112578899999999999999999


Q ss_pred             cCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      ++|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  +++|+++||..+|+..         ...+++|+.|
T Consensus        76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vyg~~---------~~~~~~E~~~  144 (337)
T 1r6d_A           76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSI---------DSGSWTESSP  144 (337)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCC---------SSSCBCTTSC
T ss_pred             CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHhCCC---------CCCCCCCCCC
Confidence            999999997643211  12456788999999999999999864  6789988876655432         1356788877


Q ss_pred             CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961          172 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  246 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  246 (397)
                      ..|...  |+.     |+++..+. ++.+++++++||+.|||+... ..++...+..  .+.  .+.++.+.+++.+.+.
T Consensus       145 ~~~~~~--Y~~sK~~~e~~~~~~~-~~~g~~~~ilrp~~v~G~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~  216 (337)
T 1r6d_A          145 LEPNSP--YAASKAGSDLVARAYH-RTYGLDVRITRCCNNYGPYQH-PEKLIPLFVT--NLL--DGGTLPLYGDGANVRE  216 (337)
T ss_dssp             CCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEECTTCC-TTSHHHHHHH--HHH--TTCCEEEETTSCCEEE
T ss_pred             CCCCCc--hHHHHHHHHHHHHHHH-HHHCCCEEEEEeeeeECCCCC-CCChHHHHHH--HHh--cCCCcEEeCCCCeeEe
Confidence            655433  664     55555443 456899999999999995322 1222222211  111  2555566677666666


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccch
Q 015961          247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE  326 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (397)
                      ++++.|+   |.+++.++..+ ..+++||++++..+|+.|+++.+++.+|.+.+.+..                 .    
T Consensus       217 ~i~v~Dv---a~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------------~----  271 (337)
T 1r6d_A          217 WVHTDDH---CRGIALVLAGG-RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK-----------------V----  271 (337)
T ss_dssp             EEEHHHH---HHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEE-----------------E----
T ss_pred             eEeHHHH---HHHHHHHHhCC-CCCCEEEeCCCCCccHHHHHHHHHHHhCCCccccee-----------------c----
Confidence            6665554   77777666543 467899999999999999999999999976321100                 0    


Q ss_pred             HHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          327 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                  ...+ ..            ..++.+|++|+++ |||+|.++++|+|+++++|++++
T Consensus       272 ------------~~~~-~~------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  314 (337)
T 1r6d_A          272 ------------ADRK-GH------------DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN  314 (337)
T ss_dssp             ------------CCCT-TC------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             ------------CCCC-CC------------cceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence                        0000 00            0134579999986 79999999999999999999865

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.2e-34  Score=270.18  Aligned_cols=295  Identities=11%  Similarity=0.052  Sum_probs=204.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h  100 (397)
                      |+|+|||||||||||++|+++|++     +  |++|++++|++.... ..++++++.+|++|.+++.++++  ++|.|+|
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            1 MNPKILIIGACGQIGTELTQKLRK-----LYGTENVIASDIRKLNTD-VVNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHH-----HHCGGGEEEEESCCCSCH-HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCceEEEECCccHHHHHHHHHHHH-----hCCCCEEEEEcCCCcccc-ccCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            567899999999999999999998     7  899999999764421 11357899999999999999998  7899999


Q ss_pred             EEEecccC-CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcc
Q 015961          101 IFYVTWTN-RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  179 (397)
Q Consensus       101 ~a~~~~~~-~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~  179 (397)
                      +|+..... ..++...+++|+.++.+++++|++.+  +++++++||..+|+..        ....+.+|+.|..|...  
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~--------~~~~~~~e~~~~~~~~~--  142 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK--IKKIFWPSSIAVFGPT--------TPKENTPQYTIMEPSTV--  142 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS--CSEEECCEEGGGCCTT--------SCSSSBCSSCBCCCCSH--
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHHhCCC--------CCCCCccccCcCCCCch--
Confidence            98643221 13567789999999999999998753  7789988876655432        11245677776555433  


Q ss_pred             hhH-----HHHHHHHHhcCCCeeEEEEcCCceeecc--CCCc-chhHHHHHHHHHHhhhcCCCceecCCccccceeeecc
Q 015961          180 YTL-----EDILFEEVEKKEELSWSVHRPDTIFGFS--PYSL-MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIAS  251 (397)
Q Consensus       180 y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~--~~~~-~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~  251 (397)
                      |+.     |+++..+. ++.+++++++||+.|||+.  ++.. .+.....  +....  .+.++..++++.+.++++++.
T Consensus       143 Y~~sK~~~e~~~~~~~-~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~i~v~  217 (312)
T 2yy7_A          143 YGISKQAGERWCEYYH-NIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDI--FYKAI--ADKKYECFLSSETKMPMMYMD  217 (312)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHCCEEECEEECEEECSSSCCCSCTTTHHHHH--HHHHH--HTSEEEESSCTTCCEEEEEHH
T ss_pred             hHHHHHHHHHHHHHHH-HhcCCcEEEEeCCeEecCCCCCCCchhhhHHHH--HHHHH--cCCCeEEecCCCceeeeeeHH
Confidence            664     55554443 4558999999999999964  2211 1222111  11111  123345566666666666655


Q ss_pred             cHHHHHHHHHHHhcCCCC---CCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHH
Q 015961          252 DADLIAEHQIWAAVDPYA---KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  328 (397)
Q Consensus       252 da~~la~~~~~~~~~~~~---~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (397)
                      |+   |++++.++..+..   .+++||+++ +.+|++|+++.+.+.+|.....+           .+. ...        
T Consensus       218 Dv---a~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~~i~~-----------~~~-~~~--------  273 (312)
T 2yy7_A          218 DA---IDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITY-----------EPD-FRQ--------  273 (312)
T ss_dssp             HH---HHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTTCEEEE-----------CCC-THH--------
T ss_pred             HH---HHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCCCceEe-----------ccC-ccc--------
Confidence            54   7787777766443   248999996 88999999999999988321110           000 000        


Q ss_pred             HHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHh
Q 015961          329 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  391 (397)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~  391 (397)
                        ..           .  ..|          ...+|++|+++ |||+|.++++|+|+++++||+
T Consensus       274 --~~-----------~--~~~----------~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          274 --KI-----------A--DSW----------PASIDDSQAREDWDWKHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             --HH-----------H--TTS----------CSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred             --cc-----------c--ccc----------cccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence              00           0  000          23579999986 799999999999999999985

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=4.3e-34  Score=267.48  Aligned_cols=287  Identities=13%  Similarity=0.061  Sum_probs=202.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCeeEEEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIFY  103 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~a~  103 (397)
                      +|+|||||||||||++|+++|++     .|++|++++|+.             .+|+.|.+++.++++  ++|.|+|+|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~~v~~~~r~~-------------~~D~~d~~~~~~~~~~~~~d~vih~a~   64 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGDVELVLRTRD-------------ELNLLDSRAVHDFFASERIDQVYLAAA   64 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTT-----CTTEEEECCCTT-------------TCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHh-----CCCeEEEEecCc-------------cCCccCHHHHHHHHHhcCCCEEEEcCe
Confidence            46899999999999999999999     899999988752             379999999999998  8999999976


Q ss_pred             eccc---CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC----CCCCC
Q 015961          104 VTWT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP----RLDAP  176 (397)
Q Consensus       104 ~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p----~~~~~  176 (397)
                      ....   ...++.+.+++|+.++.+++++|++.+  +++++++||..+|+..         ...+++|+++    ..|. 
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~vyg~~---------~~~~~~E~~~~~~~~~p~-  132 (321)
T 1e6u_A           65 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIYPKL---------AKQPMAESELLQGTLEPT-  132 (321)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGSCTT---------CCSSBCGGGTTSSCCCGG-
T ss_pred             ecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEccHHHcCCC---------CCCCcCccccccCCCCCC-
Confidence            4321   112567788999999999999998854  7799999876666432         1356677763    2221 


Q ss_pred             CcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc---chhHHHHHHHHHHhhhcC-CCceecCCcccccee
Q 015961          177 NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEG-IPLRFPGTKAAWECY  247 (397)
Q Consensus       177 ~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~-~~~~~~g~~~~~~~~  247 (397)
                      ...|+.     |+++..+. ++.+++++++||+.|||+.....   .++...+...+...+..| .++.+++++.+.+++
T Consensus       133 ~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~  211 (321)
T 1e6u_A          133 NEPYAIAKIAGIKLCESYN-RQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREF  211 (321)
T ss_dssp             GHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECE
T ss_pred             CCccHHHHHHHHHHHHHHH-HHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEe
Confidence            124664     45554443 44589999999999999543211   122222211111000123 455666777666666


Q ss_pred             eecccHHHHHHHHHHHhcCCCC--------CCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHH
Q 015961          248 SIASDADLIAEHQIWAAVDPYA--------KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLA  319 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~--------~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  319 (397)
                      +++.|+   |++++.++.++..        .+++||+++++.+|++|+++.+.+.+|.+.....          .+.   
T Consensus       212 i~v~Dv---a~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~---  275 (321)
T 1e6u_A          212 LHVDDM---AAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF----------DAS---  275 (321)
T ss_dssp             EEHHHH---HHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEE----------ETT---
T ss_pred             EEHHHH---HHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEe----------CCC---
Confidence            665554   7777777765443        2689999999999999999999999997642110          000   


Q ss_pred             HHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          320 EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                         .  +..             ..+..+|++|+++|||+|.++++|+|+++++|++++
T Consensus       276 -------------------~--~~~-------------~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~  315 (321)
T 1e6u_A          276 -------------------K--PDG-------------TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN  315 (321)
T ss_dssp             -------------------S--CCC-------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             -------------------C--CCC-------------cccccCCHHHHHhcCCccCCcHHHHHHHHHHHHHHH
Confidence                               0  000             013458999998899999999999999999999865

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-33  Score=269.45  Aligned_cols=323  Identities=15%  Similarity=0.044  Sum_probs=206.6

Q ss_pred             cccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CC---------CCCCceEEEc
Q 015961           14 KKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN---------ADHLVEYVQC   80 (397)
Q Consensus        14 ~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~---------~~~~v~~~~~   80 (397)
                      +||.    ...|+++|||||||||||++|+++|++     +|++|++++|++...    ..         ...+++++.+
T Consensus        16 ~~~~----~~~M~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   86 (375)
T 1t2a_A           16 NKYF----QGHMRNVALITGITGQDGSYLAEFLLE-----KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG   86 (375)
T ss_dssp             ------------CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCTTTGGGC---------CEEEEEC
T ss_pred             chhh----HhhcCcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEc
Confidence            5555    333557999999999999999999998     799999999975431    00         1246889999


Q ss_pred             cCCCHHHHHHHHcc--CCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEecCCccccccccc
Q 015961           81 DVSDPEETQAKLSQ--LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEA  155 (397)
Q Consensus        81 Dl~d~~~l~~~~~~--~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~  155 (397)
                      |++|.+++.+++++  +|.|+|+|+.....  ..++...+++|+.++.+++++|++.+. +..+|+++||..+|+..   
T Consensus        87 Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~---  163 (375)
T 1t2a_A           87 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKV---  163 (375)
T ss_dssp             CTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSC---
T ss_pred             cCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCC---
Confidence            99999999998886  58899997643221  125677889999999999999988641 12688888876555422   


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHH-Hh
Q 015961          156 FGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAA-VC  228 (397)
Q Consensus       156 ~g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~-i~  228 (397)
                            ...+++|+++..|..  .|+.     |.++..+. ++.+++++++||+.+||+..  ..++. ..+..++. +.
T Consensus       164 ------~~~~~~E~~~~~~~~--~Y~~sK~~~e~~~~~~~-~~~~~~~~i~r~~~~~gp~~--~~~~~~~~~~~~~~~~~  232 (375)
T 1t2a_A          164 ------QEIPQKETTPFYPRS--PYGAAKLYAYWIVVNFR-EAYNLFAVNGILFNHESPRR--GANFVTRKISRSVAKIY  232 (375)
T ss_dssp             ------SSSSBCTTSCCCCCS--HHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTS--CTTSHHHHHHHHHHHHH
T ss_pred             ------CCCCCCccCCCCCCC--hhHHHHHHHHHHHHHHH-HHhCCCEEEEecccccCCCC--CCCcchHHHHHHHHHHH
Confidence                  135678888765543  3665     44444443 45689999999999999532  22221 11111111 12


Q ss_pred             hhcCC-CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhh
Q 015961          229 KHEGI-PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEE  307 (397)
Q Consensus       229 ~~~~~-~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~  307 (397)
                      +  +. +....|++.+.+.++++.|   +|++++.++..+.  +++||+++++.+|++|+++.+++.+|.+......+  
T Consensus       233 ~--g~~~~~~~g~~~~~~~~i~v~D---va~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--  303 (375)
T 1t2a_A          233 L--GQLECFSLGNLDAKRDWGHAKD---YVEAMWLMLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKN--  303 (375)
T ss_dssp             H--TSCSCEEESCTTCEECCEEHHH---HHHHHHHHHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCG--
T ss_pred             c--CCCceeEeCCCCceeeeEEHHH---HHHHHHHHHhcCC--CceEEEeCCCcccHHHHHHHHHHHhCCCccccccc--
Confidence            2  32 3344566666666665544   5788777776543  47899999999999999999999999764210000  


Q ss_pred             cCCCCccccCHH-HHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHH
Q 015961          308 EGGGGTQRVKLA-EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFIT  385 (397)
Q Consensus       308 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~  385 (397)
                            .|..+. .++....         ..+.+..+..          .......+|++|+++ |||+|.++++|+|++
T Consensus       304 ------~p~~~~~~~~~~~~---------~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~  358 (375)
T 1t2a_A          304 ------ENEVGRCKETGKVH---------VTVDLKYYRP----------TEVDFLQGDCTKAKQKLNWKPRVAFDELVRE  358 (375)
T ss_dssp             ------GGCEEEETTTCCEE---------EEECGGGSCS----------SCCCBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             ------ccccccccccccce---------eecCcccCCc----------ccchhhcCCHHHHHHhcCCCccCCHHHHHHH
Confidence                  000000 0000000         0000000000          000145679999986 799999999999999


Q ss_pred             HHHHHhcC
Q 015961          386 WIDKVKGF  393 (397)
Q Consensus       386 ~~~~~~~~  393 (397)
                      +++|+++.
T Consensus       359 ~~~~~~~~  366 (375)
T 1t2a_A          359 MVHADVEL  366 (375)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99999764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.8e-34  Score=262.40  Aligned_cols=287  Identities=14%  Similarity=0.088  Sum_probs=189.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  106 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~  106 (397)
                      |||||||||||||++|+++|++     +||+|++++|++...        .+..|    +...+.+.++|.|+|+|+...
T Consensus         1 MkILVTGatGfIG~~L~~~L~~-----~G~~V~~l~R~~~~~--------~~~~~----~~~~~~l~~~d~vihla~~~i   63 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNA-----RGHEVTLVSRKPGPG--------RITWD----ELAASGLPSCDAAVNLAGENI   63 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCTT--------EEEHH----HHHHHCCCSCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCCCcC--------eeecc----hhhHhhccCCCEEEEeccCcc
Confidence            4799999999999999999999     899999999975431        12222    223456788999999986422


Q ss_pred             cC----CC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961          107 TN----RS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  180 (397)
Q Consensus       107 ~~----~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y  180 (397)
                      ..    ..  ......++|+.+|++|+++++..+.+...+++.||+.+|+.+         ...+.+|++|..+...+.+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~---------~~~~~~E~~p~~~~~~~~~  134 (298)
T 4b4o_A           64 LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPS---------LTAEYDEDSPGGDFDFFSN  134 (298)
T ss_dssp             SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCC---------SSCCBCTTCCCSCSSHHHH
T ss_pred             cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCC---------CCCcccccCCccccchhHH
Confidence            11    11  345678899999999999998876666777777766555432         2567788887655432212


Q ss_pred             hHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 015961          181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  260 (397)
Q Consensus       181 ~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  260 (397)
                      ...+...+......+++++++||+.|||  ++..  ....+   ....+ .+.. ...|++.++++++|+.|+   |+++
T Consensus       135 ~~~~~e~~~~~~~~~~~~~~~r~~~v~g--~~~~--~~~~~---~~~~~-~~~~-~~~g~g~~~~~~ihv~Dv---a~a~  202 (298)
T 4b4o_A          135 LVTKWEAAARLPGDSTRQVVVRSGVVLG--RGGG--AMGHM---LLPFR-LGLG-GPIGSGHQFFPWIHIGDL---AGIL  202 (298)
T ss_dssp             HHHHHHHHHCCSSSSSEEEEEEECEEEC--TTSH--HHHHH---HHHHH-TTCC-CCBTTSCSBCCEEEHHHH---HHHH
T ss_pred             HHHHHHHHHHhhccCCceeeeeeeeEEc--CCCC--chhHH---HHHHh-cCCc-ceecccCceeecCcHHHH---HHHH
Confidence            2222222222356789999999999999  4321  11111   11111 2333 346788888888777665   7777


Q ss_pred             HHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCc
Q 015961          261 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQP  340 (397)
Q Consensus       261 ~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (397)
                      ++++.++.. +++||+++++++|++|+++.+++.+|++... +          .|    .|+.+.      +   +|-  
T Consensus       203 ~~~~~~~~~-~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~-p----------vP----~~~~~~------~---~g~--  255 (298)
T 4b4o_A          203 THALEANHV-HGVLNGVAPSSATNAEFAQTFGAALGRRAFI-P----------LP----SAVVQA------V---FGR--  255 (298)
T ss_dssp             HHHHHCTTC-CEEEEESCSCCCBHHHHHHHHHHHHTCCCCC-C----------BC----HHHHHH------H---HCH--
T ss_pred             HHHHhCCCC-CCeEEEECCCccCHHHHHHHHHHHhCcCCcc-c----------CC----HHHHHH------H---hcc--
Confidence            777776554 4599999999999999999999999976432 1          11    222110      0   000  


Q ss_pred             ccccccccchhhhhhhcCcccccchhhHHHcCCCCcc-CCHHHHHHHHHH
Q 015961          341 TRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFR-NSKNSFITWIDK  389 (397)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~-~~~e~~~~~~~~  389 (397)
                               .....++.  +.-.+.+|++++||++++ +++++|++.++.
T Consensus       256 ---------~~~~~~l~--~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~~  294 (298)
T 4b4o_A          256 ---------QRAIMLLE--GQKVIPRRTLATGYQYSFPELGAALKEIAEN  294 (298)
T ss_dssp             ---------HHHHHHHC--CCCBCCHHHHHTTCCCSCCSHHHHHHHHHHC
T ss_pred             ---------hhHHHhhC--CCEEcHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence                     00001111  233588999999999998 589999888773

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=2.7e-33  Score=265.99  Aligned_cols=298  Identities=14%  Similarity=0.068  Sum_probs=204.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC------CCCCceEEEccCCCHHHHHHHHcc--CCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLSQ--LTD   97 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~~--~~~   97 (397)
                      +++|||||||||||++|+++|++     .|++|++++|++.....      ...+++++.+|++|++++.+++++  +|.
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   83 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQT-----MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEI   83 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHh-----CCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence            47899999999999999999998     89999999997643210      124789999999999999998887  788


Q ss_pred             eeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        98 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      |+|+|+.....  ..++...+++|+.++.+++++|++.+ .+.+++++||..+|+..        ....+++|+++..+.
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~vyg~~--------~~~~~~~E~~~~~~~  154 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDKCYDNK--------EWIWGYRENEAMGGY  154 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGGGBCCC--------CSSSCBCTTSCBCCS
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEecCHHHhCCC--------CcCCCCCCCCCCCCC
Confidence            99997632211  12567788999999999999998753 37899999876666432        012356777765543


Q ss_pred             CCcchhH-----HHHHHHHHhc--------CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          176 PNFYYTL-----EDILFEEVEK--------KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~~~--------~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                      ..  |+.     |+++..+..+        ..+++++++||+.|||+......++...+..  .+.  .+.++.+. ++.
T Consensus       155 ~~--Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~--~~~--~g~~~~~~-~~~  227 (357)
T 1rkx_A          155 DP--YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILR--AFE--QSQPVIIR-NPH  227 (357)
T ss_dssp             SH--HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHH--HHH--TTCCEECS-CTT
T ss_pred             Cc--cHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHH--HHh--cCCCEEEC-CCC
Confidence            33  664     4444444311        1289999999999999532211222222211  111  24554443 344


Q ss_pred             ccceeeecccHHHHHHHHHHHhcC----CCCCCCceeccCC--CeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcccc
Q 015961          243 AWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNG--DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRV  316 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~----~~~~g~~yni~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  316 (397)
                      +.+.++++.|+   |.+++.++..    +...+++||++++  +.+|++|+++.+.+.+|.+.....            .
T Consensus       228 ~~~~~v~v~Dv---a~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~------------~  292 (357)
T 1rkx_A          228 AIRPWQHVLEP---LSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL------------D  292 (357)
T ss_dssp             CEECCEETHHH---HHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------------
T ss_pred             CeeccEeHHHH---HHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcccc------------C
Confidence            45556666554   6666665542    2345789999984  579999999999999997643200            0


Q ss_pred             CHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          317 KLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      +.               .    .+..               .....+|++|+++ |||+|.++++|+|+++++|+++.
T Consensus       293 ~~---------------~----~~~~---------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          293 GN---------------A----HPHE---------------AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             -------------------------C---------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CC---------------C----CCcC---------------cccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence            00               0    0000               0134589999986 79999999999999999999764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=9.4e-35  Score=271.72  Aligned_cols=284  Identities=15%  Similarity=0.122  Sum_probs=200.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC---CCC------CCCCceEEEccCCCHHHHHHHHcc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---NWN------ADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~---~~~------~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      .|+++|||||||||||++|+++|++     .|++|++++|++..   ...      ...+++++.+|+.          +
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~   69 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVA-----SGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------D   69 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHH-----TTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------T
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHH-----CCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------c
Confidence            3568999999999999999999999     89999999997651   110      1134556666654          6


Q ss_pred             CCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  172 (397)
Q Consensus        95 ~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~  172 (397)
                      +|.|+|+|+.....  ..++...++ |+.++.+++++|++.+  +++++++||..+|+..         ...+++|++|.
T Consensus        70 ~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~--v~~~v~~SS~~v~~~~---------~~~~~~E~~~~  137 (321)
T 3vps_A           70 VRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG--VPKVVVGSTCEVYGQA---------DTLPTPEDSPL  137 (321)
T ss_dssp             EEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSC---------SSSSBCTTSCC
T ss_pred             CCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC--CCeEEEecCHHHhCCC---------CCCCCCCCCCC
Confidence            78899997654321  234556677 9999999999999875  7899988876666432         24578888887


Q ss_pred             CCCCCcchhH-----HHHHHHHHhcCCCe-eEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961          173 LDAPNFYYTL-----EDILFEEVEKKEEL-SWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  246 (397)
Q Consensus       173 ~~~~~~~y~~-----e~~l~~~~~~~~g~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  246 (397)
                      .|...  |+.     |+++..+. ++.++ +++++||+.|||+.... ..+...+...  +.  .+.++..+|++.+.+.
T Consensus       138 ~p~~~--Y~~sK~~~E~~~~~~~-~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~  209 (321)
T 3vps_A          138 SPRSP--YAASKVGLEMVAGAHQ-RASVAPEVGIVRFFNVYGPGERP-DALVPRLCAN--LL--TRNELPVEGDGEQRRD  209 (321)
T ss_dssp             CCCSH--HHHHHHHHHHHHHHHH-HSSSSCEEEEEEECEEECTTCCT-TSHHHHHHHH--HH--HHSEEEEETTSCCEEC
T ss_pred             CCCCh--hHHHHHHHHHHHHHHH-HHcCCCceEEEEeccccCcCCCC-CChHHHHHHH--HH--cCCCeEEeCCCCceEc
Confidence            66543  554     56666655 56788 99999999999953322 2222222111  11  2445566777776666


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccch
Q 015961          247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE  326 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (397)
                      ++++.|   +|++++.++..+.. | +||+++++.+|+.|+++.+. .+|.+......          +.          
T Consensus       210 ~v~v~D---va~~~~~~~~~~~~-g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~----------~~----------  263 (321)
T 3vps_A          210 FTYITD---VVDKLVALANRPLP-S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARK----------QP----------  263 (321)
T ss_dssp             EEEHHH---HHHHHHHGGGSCCC-S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEE----------CC----------
T ss_pred             eEEHHH---HHHHHHHHHhcCCC-C-eEEecCCCcccHHHHHHHHH-HhCCCCccccC----------CC----------
Confidence            666555   48888877766544 6 99999999999999999999 99876432100          00          


Q ss_pred             HHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCC-ccCCHHHHHHHHHHHhcCCC
Q 015961          327 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSG-FRNSKNSFITWIDKVKGFKI  395 (397)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p-~~~~~e~~~~~~~~~~~~~~  395 (397)
                                  .+..               ..+..+|++|+++ |||+| .++++|+|+++++|++++++
T Consensus       264 ------------~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          264 ------------RPNE---------------ITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDL  307 (321)
T ss_dssp             ------------CTTC---------------CSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred             ------------CCCC---------------cceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence                        0000               0145689999997 79999 99999999999999998875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-34  Score=269.48  Aligned_cols=292  Identities=9%  Similarity=0.085  Sum_probs=188.5

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHcc-----CCCeeE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ-----LTDVTH  100 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~-----~~~V~h  100 (397)
                      +|||||||||||++|+++|++     +| ++|++++|.+... .....++. +.+|+.|.+.+..++++     +|.|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~-----~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHT-----TTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHH-----CCCcEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccccCCCcEEEE
Confidence            589999999999999999999     78 8999999975432 10012334 67999999999888875     888999


Q ss_pred             EEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961          101 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  180 (397)
Q Consensus       101 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y  180 (397)
                      +|+.......++.+.+++|+.++.+++++|++.+  + +++++||..+|+..         ...+++|+++..|...  |
T Consensus        75 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~-~~v~~SS~~v~g~~---------~~~~~~E~~~~~p~~~--Y  140 (310)
T 1eq2_A           75 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATYGGR---------TSDFIESREYEKPLNV--Y  140 (310)
T ss_dssp             CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT--C-CEEEEEEGGGGTTC---------CSCBCSSGGGCCCSSH--H
T ss_pred             CcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEeeHHHhCCC---------CCCCCCCCCCCCCCCh--h
Confidence            9875443334678889999999999999999864  5 88888876555421         1346778777655433  6


Q ss_pred             hH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc---chhHHHHHHHHHHhhhcCCCceecCCccc-cceeeecc
Q 015961          181 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEGIPLRFPGTKAA-WECYSIAS  251 (397)
Q Consensus       181 ~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~g~~~~-~~~~~~~~  251 (397)
                      +.     |+++..+. ++.+++++++||+.|||+.....   .++...+..  .+.  .+.++...+++.+ .+.++++.
T Consensus       141 ~~sK~~~e~~~~~~~-~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~g~~~~~~~i~v~  215 (310)
T 1eq2_A          141 GYSKFLFDEYVRQIL-PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNT--QLN--NGESPKLFEGSENFKRDFVYVG  215 (310)
T ss_dssp             HHHHHHHHHHHHHHG-GGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHH--HHH--C-------------CBCEEEHH
T ss_pred             HHHHHHHHHHHHHHH-HHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHH--HHH--cCCCcEEecCCCcceEccEEHH
Confidence            54     55555554 56789999999999999532211   122222211  111  2445455666665 56666655


Q ss_pred             cHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHH
Q 015961          252 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  331 (397)
Q Consensus       252 da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (397)
                      |+   |.+++.++..+.  +++||+++++.+|++|+++.+.+.+|.+...+             .+...++.        
T Consensus       216 Dv---a~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-------------~~~~~~~~--------  269 (310)
T 1eq2_A          216 DV---ADVNLWFLENGV--SGIFNLGTGRAESFQAVADATLAYHKKGQIEY-------------IPFPDKLK--------  269 (310)
T ss_dssp             HH---HHHHHHHHHHCC--CEEEEESCSCCBCHHHHHHHC----------------------------------------
T ss_pred             HH---HHHHHHHHhcCC--CCeEEEeCCCccCHHHHHHHHHHHcCCCCcee-------------CCCChhhh--------
Confidence            54   777777766544  88999999999999999999999998761110             01000000        


Q ss_pred             HHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCC-CCccCCHHHHHHHHHHHhcC
Q 015961          332 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGF-SGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~-~p~~~~~e~~~~~~~~~~~~  393 (397)
                        .       .      +        .....+|++|++++|| .|.++++|+|+++++|++++
T Consensus       270 --~-------~------~--------~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          270 --G-------R------Y--------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             -----------------C--------CCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC--
T ss_pred             --c-------c------c--------ccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHHhc
Confidence              0       0      0        0134579999999999 89999999999999999763

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=3.8e-34  Score=271.93  Aligned_cols=294  Identities=9%  Similarity=0.061  Sum_probs=203.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHc-----cCCCe
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLS-----QLTDV   98 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~-----~~~~V   98 (397)
                      +++|||||||||||++|+++|++     .| ++|++++|.+... .....++. +.+|+.|.+.+..+++     ++|.|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHH-----TTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEE
Confidence            36899999999999999999998     78 8999999975431 11112344 7899999999988887     48889


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCc
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  178 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~  178 (397)
                      +|+|+.......++.+.+++|+.++.+++++|++.+  + +++++||..+|+..         ...+++|+.+..|... 
T Consensus       120 ih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~-r~V~~SS~~v~g~~---------~~~~~~E~~~~~p~~~-  186 (357)
T 2x6t_A          120 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATYGGR---------TSDFIESREYEKPLNV-  186 (357)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT--C-CEEEEEEGGGGCSC---------SSCCCSSGGGCCCSSH-
T ss_pred             EECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEcchHHhCCC---------CCCCcCCcCCCCCCCh-
Confidence            999875433334678889999999999999999864  5 88888876655421         1346788877665433 


Q ss_pred             chhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc---chhHHHHHHHHHHhhhcCCCceecCCccc-cceeee
Q 015961          179 YYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEGIPLRFPGTKAA-WECYSI  249 (397)
Q Consensus       179 ~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~g~~~~-~~~~~~  249 (397)
                       |+.     |+++..+. ++.+++++++||+.|||+.....   .+....+..  .+.  .+.++...+++.+ ...+++
T Consensus       187 -Y~~sK~~~E~~~~~~~-~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~i~  260 (357)
T 2x6t_A          187 -FGYSKFLFDEYVRQIL-PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNT--QLN--NGESPKLFEGSENFKRDFVY  260 (357)
T ss_dssp             -HHHHHHHHHHHHHHHG-GGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHH--HHH--TTCCCEEETTGGGCEECEEE
T ss_pred             -hHHHHHHHHHHHHHHH-HHcCCCEEEEecCeEECCCCCCCcccchHHHHHHH--HHH--cCCCcEEeCCCCcceEccEE
Confidence             654     55555554 56689999999999999543211   122222211  111  2445555666665 555555


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHH
Q 015961          250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW  329 (397)
Q Consensus       250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (397)
                      +.|   +|.+++.++..+.  +++||+++++.+|++|+++.+.+.+|.+ . +..         .+.+.  ++       
T Consensus       261 v~D---va~ai~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~-~~~---------~~~~~--~~-------  315 (357)
T 2x6t_A          261 VGD---VADVNLWFLENGV--SGIFNLGTGRAESFQAVADATLAYHKKG-Q-IEY---------IPFPD--KL-------  315 (357)
T ss_dssp             HHH---HHHHHHHHHHHCC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-C-CEE---------ECCCG--GG-------
T ss_pred             HHH---HHHHHHHHHhcCC--CCeEEecCCCcccHHHHHHHHHHHcCCC-C-cee---------cCCCc--cc-------
Confidence            544   5778777776544  8899999999999999999999999986 1 110         11110  00       


Q ss_pred             HHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCC-CCccCCHHHHHHHHHHHhcC
Q 015961          330 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGF-SGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~-~p~~~~~e~~~~~~~~~~~~  393 (397)
                                    .  ..        ......+|++|++++|| .|.++++|+|+++++|++++
T Consensus       316 --------------~--~~--------~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          316 --------------K--GR--------YQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD  356 (357)
T ss_dssp             --------------T--TS--------CCSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC--
T ss_pred             --------------c--cc--------cccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHhhc
Confidence                          0  00        00134579999999999 89999999999999999763

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=3.3e-33  Score=263.95  Aligned_cols=311  Identities=16%  Similarity=0.187  Sum_probs=207.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC--CCCCCCceEEEccCCCH-HHHHHHHccCCCeeEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--WNADHLVEYVQCDVSDP-EETQAKLSQLTDVTHIF  102 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~~V~h~a  102 (397)
                      |+|||||||||||++|+++|++     . |++|++++|++...  .....+++++.+|++|. +.+.++++++|.|+|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A   75 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLR-----EDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHH-----STTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CeEEEECCCcHHHHHHHHHHHH-----hCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence            4799999999999999999998     6 89999999976432  11235789999999984 56888889999999997


Q ss_pred             EecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC---CC--
Q 015961          103 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL---DA--  175 (397)
Q Consensus       103 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~---~~--  175 (397)
                      +.....  ..++.+.+++|+.++.+++++|++.+   ++++++||..+|+..         ...+++|+++..   |.  
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~SS~~v~g~~---------~~~~~~e~~~~~~~~~~~~  143 (345)
T 2bll_A           76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVYGMC---------SDKYFDEDHSNLIVGPVNK  143 (345)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGGBTC---------CCSSBCTTTCCCBCCCTTC
T ss_pred             cccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC---CeEEEEecHHHcCCC---------CCCCcCCcccccccCcccC
Confidence            643321  12566788999999999999998753   688988876655432         134566766432   11  


Q ss_pred             CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc-------chhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961          176 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-------MNLVGALCVYAAVCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  243 (397)
                      +...|+.     |+++..+. ++.+++++++||+.|||+.....       ......+..  .+.  .+.++.+++++.+
T Consensus       144 ~~~~Y~~sK~~~e~~~~~~~-~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~g~~  218 (345)
T 2bll_A          144 PRWIYSVSKQLLDRVIWAYG-EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL--NLV--EGSPIKLIDGGKQ  218 (345)
T ss_dssp             GGGHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHH--HHH--HTCCEEEGGGSCC
T ss_pred             cccccHHHHHHHHHHHHHHH-HhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHH--HHH--cCCCcEEECCCCE
Confidence            1224664     55555443 45689999999999999543211       112222211  111  2556666666666


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC-eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961          244 WECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  320 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
                      .+.++++.|   +|.+++.++..+.  ..+++||+++++ .+|++|+++.+.+.+|.+......          +.....
T Consensus       219 ~~~~i~v~D---va~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~----------~~~~~~  285 (345)
T 2bll_A          219 KRCFTDIRD---GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHF----------PPFAGF  285 (345)
T ss_dssp             EEECEEHHH---HHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGS----------CCCCCE
T ss_pred             EEEEEEHHH---HHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccC----------cccccc
Confidence            656665555   4788777776543  467899999986 899999999999999876432110          000000


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCC
Q 015961          321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK  394 (397)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~  394 (397)
                      ........+       +.   ..        .+    ..+..+|++|+++ |||+|.++++|+|+++++|+++..
T Consensus       286 ~~~~~~~~~-------~~---~~--------~~----~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  338 (345)
T 2bll_A          286 RVVESSSYY-------GK---GY--------QD----VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (345)
T ss_dssp             EEC----------------------------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             ccccchhhc-------cc---cc--------cc----hhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence            000000000       00   00        00    0145679999986 799999999999999999998654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=6.2e-34  Score=268.38  Aligned_cols=307  Identities=15%  Similarity=0.130  Sum_probs=192.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHccC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      .|+|+|||||||||||++|+++|++     +||+|++++|++....        ....+++++.+|++|.+++.++++++
T Consensus         7 ~~~~~vlVTGatGfIG~~l~~~Ll~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   81 (338)
T 2rh8_A            7 IGKKTACVVGGTGFVASLLVKLLLQ-----KGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGC   81 (338)
T ss_dssp             --CCEEEEECTTSHHHHHHHHHHHH-----TTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTC
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCC
Confidence            3678999999999999999999998     8999999999754311        01136889999999999999999999


Q ss_pred             CCeeEEEEecccCCCcH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCc-cccccccccCCCCCCCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTK-HYLGPFEAFGKIKPYDPPFTEDMPRL  173 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~-~y~ss~~~~g~~~~~~~~~~E~~p~~  173 (397)
                      |.|+|+|+.......++ .+.+++|+.|+.+++++|++.+ .+++|+++||.. +|+..  .++.    ..+++|+.+..
T Consensus        82 D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~--~~~~----~~~~~E~~~~~  154 (338)
T 2rh8_A           82 DFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQ--LDGT----GLVVDEKNWTD  154 (338)
T ss_dssp             SEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHH--HTCS----CCCCCTTTTTC
T ss_pred             CEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCC--cCCC----CcccChhhccc
Confidence            99999986432222233 3478999999999999998753 378999998765 33221  1111    12556654211


Q ss_pred             -----CC--CCcchh-----HHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec-CC
Q 015961          174 -----DA--PNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP-GT  240 (397)
Q Consensus       174 -----~~--~~~~y~-----~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-g~  240 (397)
                           |.  ..+.|+     .|+++.++. +..|++++++||++|||+........  .+.......  .+.+..+. +.
T Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~~lrp~~v~Gp~~~~~~~~--~~~~~~~~~--~g~~~~~~~~~  229 (338)
T 2rh8_A          155 IEFLTSAKPPTWGYPASKTLAEKAAWKFA-EENNIDLITVIPTLMAGSSLTSDVPS--SIGLAMSLI--TGNEFLINGMK  229 (338)
T ss_dssp             C-------CCCCCCTTSCCHHHHHHHHHH-HHHTCCEEEEEECEEESCCSSSSCCH--HHHHHHHHH--HTCHHHHHHHH
T ss_pred             hhhccccCCccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCceECCCCCCCCCc--hHHHHHHHH--cCCcccccccc
Confidence                 11  011243     477776654 45689999999999999543221111  111111111  12221111 00


Q ss_pred             cccc-ceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHH
Q 015961          241 KAAW-ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLA  319 (397)
Q Consensus       241 ~~~~-~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  319 (397)
                      ..+. ....+..+++++|.+++.++..+. .++.||+++ ..+|++|+++.+.+.++....+              ..+.
T Consensus       230 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~--------------~~~~  293 (338)
T 2rh8_A          230 GMQMLSGSVSIAHVEDVCRAHIFVAEKES-ASGRYICCA-ANTSVPELAKFLSKRYPQYKVP--------------TDFG  293 (338)
T ss_dssp             HHHHHHSSEEEEEHHHHHHHHHHHHHCTT-CCEEEEECS-EEECHHHHHHHHHHHCTTSCCC--------------CCCT
T ss_pred             ccccccCcccEEEHHHHHHHHHHHHcCCC-cCCcEEEec-CCCCHHHHHHHHHHhCCCCCCC--------------CCCC
Confidence            0000 001133444555777777775543 345788875 5699999999999887531111              0000


Q ss_pred             HHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961          320 EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                                       .. +..                ....+|++|+++|||+|.++++|+|+++++|+++.|++|
T Consensus       294 -----------------~~-~~~----------------~~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~~~~~~  337 (338)
T 2rh8_A          294 -----------------DF-PPK----------------SKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ  337 (338)
T ss_dssp             -----------------TS-CSS----------------CSCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHHTTCC-
T ss_pred             -----------------CC-CcC----------------cceeechHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence                             00 000                023579999988999999999999999999999999886

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=2.3e-33  Score=270.28  Aligned_cols=305  Identities=12%  Similarity=0.072  Sum_probs=205.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcc-CCCCCCCCcEEEEEeCCCCCC-----------C-------CC---CCC---ceEEEcc
Q 015961           27 SVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPKPN-----------W-------NA---DHL---VEYVQCD   81 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~-~~~~~~~g~~V~~l~R~~~~~-----------~-------~~---~~~---v~~~~~D   81 (397)
                      |+|||||||||||++|+++|+ +     .|++|++++|.....           .       ..   ..+   ++++.+|
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRD-----TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH-----CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHh-----CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECC
Confidence            589999999999999999999 8     799999999875431           0       00   124   8899999


Q ss_pred             CCCHHHHHHHHc--c-CCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccccccccc
Q 015961           82 VSDPEETQAKLS--Q-LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        82 l~d~~~l~~~~~--~-~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                      ++|++++.++++  + +|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  +++|+++||..+|+...  .
T Consensus        78 l~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~--~~~iv~~SS~~v~g~~~--~  153 (397)
T 1gy8_A           78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK--CDKIIFSSSAAIFGNPT--M  153 (397)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGTBSCC--C
T ss_pred             CCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC--CCEEEEECCHHHhCCCC--c
Confidence            999999999887  6 88899997643221  12567789999999999999998753  67899888776664321  0


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC--------cchhHHHHH-
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS--------LMNLVGALC-  222 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~--------~~~~~~~~~-  222 (397)
                      +...+...+++|+++..|..  .|+.     |+++..+. ++.+++++++||++|||+.+..        ..++...+. 
T Consensus       154 ~~~~~~~~~~~E~~~~~p~~--~Y~~sK~~~e~~~~~~~-~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~  230 (397)
T 1gy8_A          154 GSVSTNAEPIDINAKKSPES--PYGESKLIAERMIRDCA-EAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG  230 (397)
T ss_dssp             -----CCCCBCTTSCCBCSS--HHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred             ccccccccCcCccCCCCCCC--chHHHHHHHHHHHHHHH-HHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHH
Confidence            00001145778888765543  3664     45555443 4458999999999999964311        122222221 


Q ss_pred             HHH-HHhhhcC----------CCceecC------CccccceeeecccHHHHHHHHHHHhcCCCCC-----C---Cceecc
Q 015961          223 VYA-AVCKHEG----------IPLRFPG------TKAAWECYSIASDADLIAEHQIWAAVDPYAK-----N---EAFNCN  277 (397)
Q Consensus       223 ~~~-~i~~~~~----------~~~~~~g------~~~~~~~~~~~~da~~la~~~~~~~~~~~~~-----g---~~yni~  277 (397)
                      .++ .+.++..          .++.+.|      ++.+.++++|+.|+   |.+++.++..+...     +   ++||++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv---a~a~~~~l~~~~~~~~~~~~~~~~~~ni~  307 (397)
T 1gy8_A          231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDL---ASAHILALDYVEKLGPNDKSKYFSVFNLG  307 (397)
T ss_dssp             HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHH---HHHHHHHHHHHHTCCTTTGGGSEEEEEES
T ss_pred             HHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHH---HHHHHHHHhcccccccccccCCCcEEEeC
Confidence            000 1111111          2455555      45555566655554   77776665432222     3   799999


Q ss_pred             CCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhc
Q 015961          278 NGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLT  357 (397)
Q Consensus       278 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (397)
                      +++.+|++|+++.+.+.+|.+.+..            ..+                    ....   .            
T Consensus       308 ~~~~~s~~e~~~~i~~~~g~~~~~~------------~~~--------------------~~~~---~------------  340 (397)
T 1gy8_A          308 TSRGYSVREVIEVARKTTGHPIPVR------------ECG--------------------RREG---D------------  340 (397)
T ss_dssp             CSCCEEHHHHHHHHHHHHCCCCCEE------------EEC--------------------CCTT---C------------
T ss_pred             CCCcccHHHHHHHHHHHhCCCCCee------------eCC--------------------CCCC---c------------
Confidence            9999999999999999999753220            000                    0000   0            


Q ss_pred             CcccccchhhHHH-cCCCCcc-CCHHHHHHHHHHHhcC
Q 015961          358 GEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVKGF  393 (397)
Q Consensus       358 ~~~~~~d~~k~~~-lG~~p~~-~~~e~~~~~~~~~~~~  393 (397)
                      .....+|++|+++ |||+|.+ +++|+|+++++|+++.
T Consensus       341 ~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          341 PAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             ccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            0134579999975 7999999 9999999999999876

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-33  Score=259.66  Aligned_cols=281  Identities=14%  Similarity=0.042  Sum_probs=196.2

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCe
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDV   98 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V   98 (397)
                      ++++..++|||||||||||++|+++|++     +|++|++++|+              .+|++|.+++.++++  ++|.|
T Consensus         7 ~~~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~--------------~~Dl~d~~~~~~~~~~~~~d~v   67 (292)
T 1vl0_A            7 HHHHHHMKILITGANGQLGREIQKQLKG-----KNVEVIPTDVQ--------------DLDITNVLAVNKFFNEKKPNVV   67 (292)
T ss_dssp             -----CEEEEEESTTSHHHHHHHHHHTT-----SSEEEEEECTT--------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             ccccccceEEEECCCChHHHHHHHHHHh-----CCCeEEeccCc--------------cCCCCCHHHHHHHHHhcCCCEE
Confidence            3566778999999999999999999999     89999999986              389999999999998  78999


Q ss_pred             eEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  176 (397)
Q Consensus        99 ~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~  176 (397)
                      +|+|+.....  ..++...+++|+.++.+++++|++.+  + +++++||..+|+..         ...+++|+++..|..
T Consensus        68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~--~-~iv~~SS~~v~~~~---------~~~~~~E~~~~~~~~  135 (292)
T 1vl0_A           68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--A-EIVQISTDYVFDGE---------AKEPITEFDEVNPQS  135 (292)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--C-EEEEEEEGGGSCSC---------CSSCBCTTSCCCCCS
T ss_pred             EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEechHHeECCC---------CCCCCCCCCCCCCcc
Confidence            9997643221  13567789999999999999999864  4 88888876555432         135778888766543


Q ss_pred             CcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHH
Q 015961          177 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLI  256 (397)
Q Consensus       177 ~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~l  256 (397)
                        .|+..|...+.+.+..+.+++++||+.|||+  +  .++...+..  .+.  .+.++...|+  +...+++   ++++
T Consensus       136 --~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~--~--~~~~~~~~~--~~~--~~~~~~~~~~--~~~~~i~---v~Dv  200 (292)
T 1vl0_A          136 --AYGKTKLEGENFVKALNPKYYIVRTAWLYGD--G--NNFVKTMIN--LGK--THDELKVVHD--QVGTPTS---TVDL  200 (292)
T ss_dssp             --HHHHHHHHHHHHHHHHCSSEEEEEECSEESS--S--SCHHHHHHH--HHH--HCSEEEEESS--CEECCEE---HHHH
T ss_pred             --HHHHHHHHHHHHHHhhCCCeEEEeeeeeeCC--C--cChHHHHHH--HHh--cCCcEEeecC--eeeCCcc---HHHH
Confidence              4777666655543444557999999999995  2  122222211  111  2444444443  3334444   4555


Q ss_pred             HHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHh
Q 015961          257 AEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVREN  336 (397)
Q Consensus       257 a~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (397)
                      |.+++.++..+  .+++||+++++.+|+.|+++.+.+.+|.+.....          .+...                 +
T Consensus       201 a~~~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~-----------------~  251 (292)
T 1vl0_A          201 ARVVLKVIDEK--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTP----------CTTEE-----------------F  251 (292)
T ss_dssp             HHHHHHHHHHT--CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEE----------ECSTT-----------------S
T ss_pred             HHHHHHHHhcC--CCcEEEecCCCCccHHHHHHHHHHHhCCCCceee----------ccccc-----------------c
Confidence            78877776654  6889999999999999999999999997642210          00000                 0


Q ss_pred             CCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          337 QLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                      ..   ....            ..+..+|++|+++ |||+|. +++|+|+++++||++
T Consensus       252 ~~---~~~~------------~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~  292 (292)
T 1vl0_A          252 PR---PAKR------------PKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM  292 (292)
T ss_dssp             CC---SSCC------------CSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred             Cc---ccCC------------CccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence            00   0000            0145689999997 699998 999999999999974

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=5.2e-33  Score=268.41  Aligned_cols=297  Identities=17%  Similarity=0.131  Sum_probs=201.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------C---------------CCCCCceEEEc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W---------------NADHLVEYVQC   80 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~---------------~~~~~v~~~~~   80 (397)
                      .+++|||||||||||++|+++|++     +|++|++++|.....         .               ....+++++.+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~   84 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSK-----KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVG   84 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEES
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHh-----CCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEEC
Confidence            347999999999999999999998     899999998853110         0               01247889999


Q ss_pred             cCCCHHHHHHHHcc--CCCeeEEEEecccC--CCcH---HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccc
Q 015961           81 DVSDPEETQAKLSQ--LTDVTHIFYVTWTN--RSTE---AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPF  153 (397)
Q Consensus        81 Dl~d~~~l~~~~~~--~~~V~h~a~~~~~~--~~~~---~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~  153 (397)
                      |++|.+++.+++++  +|.|+|+|+.....  ..++   ...+++|+.|+.+++++|++.+. .++++++||..+|+.. 
T Consensus        85 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~~~~V~~SS~~vyg~~-  162 (404)
T 1i24_A           85 DICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTMGEYGTP-  162 (404)
T ss_dssp             CTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCGGGGCCC-
T ss_pred             CCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC-CcEEEEeCcHHHhCCC-
Confidence            99999999999988  89999998753221  1123   24779999999999999988641 2588988876655432 


Q ss_pred             cccCCCCCCCCCCCCC--------------CCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc
Q 015961          154 EAFGKIKPYDPPFTED--------------MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL  214 (397)
Q Consensus       154 ~~~g~~~~~~~~~~E~--------------~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~  214 (397)
                               ..+++|+              .+..|.  ..|+.     |+++..+. +..|++++++||+.|||++....
T Consensus       163 ---------~~~~~E~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~~~e~~~~~~~-~~~gi~~~ivrp~~v~Gp~~~~~  230 (404)
T 1i24_A          163 ---------NIDIEEGYITITHNGRTDTLPYPKQAS--SFYHLSKVHDSHNIAFTC-KAWGIRATDLNQGVVYGVKTDET  230 (404)
T ss_dssp             ---------SSCBCSSEEEEEETTEEEEEECCCCCC--SHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECSCCTTG
T ss_pred             ---------CCCCCccccccccccccccccCCCCCC--ChhHHHHHHHHHHHHHHH-HhcCCeEEEEecceeeCCCCCcc
Confidence                     2344554              233332  33665     44444443 44589999999999999543110


Q ss_pred             ----------------chhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCC--Cceec
Q 015961          215 ----------------MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKN--EAFNC  276 (397)
Q Consensus       215 ----------------~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g--~~yni  276 (397)
                                      ......+..  .+.  .+.++.+.|++.+.++++|+.|+   |.+++.++..+...+  ++||+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~g~~~~~~g~g~~~~~~i~v~Dv---a~a~~~~l~~~~~~g~~~~yni  303 (404)
T 1i24_A          231 EMHEELRNRLDYDAVFGTALNRFCV--QAA--VGHPLTVYGKGGQTRGYLDIRDT---VQCVEIAIANPAKAGEFRVFNQ  303 (404)
T ss_dssp             GGSGGGCCCCCCSTTTCCHHHHHHH--HHH--HTCCEEEETTSCCEEEEEEHHHH---HHHHHHHHHSCCCTTCEEEEEE
T ss_pred             ccccccccccccccchhhHHHHHHH--HHH--cCCeeEEeCCCCceECcEEHHHH---HHHHHHHHhCcccCCCceEEEE
Confidence                            112222211  112  25566666777666666666554   888887776655456  79999


Q ss_pred             cCCCeeehHHHHHHHHHH---hCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhh
Q 015961          277 NNGDVFKWKHLWKVLAEQ---FGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVD  353 (397)
Q Consensus       277 ~~~~~~s~~el~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (397)
                      ++ ..+|++|+++.+++.   +|.+......          +..                        ....        
T Consensus       304 ~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~----------p~~------------------------~~~~--------  340 (404)
T 1i24_A          304 FT-EQFSVNELASLVTKAGSKLGLDVKKMTV----------PNP------------------------RVEA--------  340 (404)
T ss_dssp             CS-EEEEHHHHHHHHHHHHHTTTCCCCEEEE----------CCS------------------------SCSC--------
T ss_pred             CC-CCCcHHHHHHHHHHHHHhhCCCcccccc----------Ccc------------------------cCcc--------
Confidence            98 889999999999998   6665321100          000                        0000        


Q ss_pred             hhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          354 LVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       354 ~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                         ....+.+|++|+++|||+|.++++++++++++|++..
T Consensus       341 ---~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~  377 (404)
T 1i24_A          341 ---EEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF  377 (404)
T ss_dssp             ---SSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             ---ccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhh
Confidence               0013457999999899999999999999999998643

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=9.4e-34  Score=264.50  Aligned_cols=292  Identities=12%  Similarity=0.074  Sum_probs=178.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a  102 (397)
                      |+|+|||||||||||++|+++|++     +|++|++++|+...     ++  ++.+|++|++++.+++++  +|.|+|+|
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~-----~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQ-----NNWHAVGCGFRRAR-----PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEC-------------------------CHHHHHHHCCSEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHh-----CCCeEEEEccCCCC-----CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            568999999999999999999999     89999999986533     22  788999999998888876  78899998


Q ss_pred             EecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961          103 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  180 (397)
Q Consensus       103 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y  180 (397)
                      +.....  ..++...+++|+.++.+++++|.+.+  + +++++||..+|+.          ...+++|++|..|.  ..|
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~-~~v~~SS~~v~~~----------~~~~~~E~~~~~~~--~~Y  133 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVG--A-FLIYISSDYVFDG----------TNPPYREEDIPAPL--NLY  133 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHT--C-EEEEEEEGGGSCS----------SSCSBCTTSCCCCC--SHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEchHHHcCC----------CCCCCCCCCCCCCc--CHH
Confidence            754332  23567788999999999999999864  3 7888887665542          14567888876554  348


Q ss_pred             hHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 015961          181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  260 (397)
Q Consensus       181 ~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  260 (397)
                      +..|...+...+..+++++++||+.|||+......++...+..  .+. ..+.++...+  .+...++++   +++|.++
T Consensus       134 ~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~--~~~~~~i~v---~Dva~a~  205 (315)
T 2ydy_A          134 GKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFD--KVQ-FSNKSANMDH--WQQRFPTHV---KDVATVC  205 (315)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHH--HHH-CCSSCEEEEC--SSBBCCEEH---HHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHH--HHH-hcCCCeeecc--CceECcEEH---HHHHHHH
Confidence            7766666554444567889999999999543211122222211  011 0244444433  333445544   4457777


Q ss_pred             HHHhcCC---CCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhC
Q 015961          261 IWAAVDP---YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQ  337 (397)
Q Consensus       261 ~~~~~~~---~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (397)
                      +.++.++   ...+++||+++++.+|+.|+++.+.+.+|.+...+.           +.+.  +..              
T Consensus       206 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-----------~~~~--~~~--------------  258 (315)
T 2ydy_A          206 RQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLR-----------PITD--SPV--------------  258 (315)
T ss_dssp             HHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEE-----------EECS--CCC--------------
T ss_pred             HHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhhee-----------cccc--ccc--------------
Confidence            7666542   356789999999999999999999999998643211           1110  000              


Q ss_pred             CCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          338 LQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      .   ...+            ..+..+|++|++++||+|.++++|+|+++++|++++
T Consensus       259 ~---~~~~------------~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~  299 (315)
T 2ydy_A          259 L---GAQR------------PRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID  299 (315)
T ss_dssp             S---SSCC------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred             c---ccCC------------CcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence            0   0000            014458999999889999999999999999999876

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=6e-33  Score=263.94  Aligned_cols=310  Identities=13%  Similarity=0.073  Sum_probs=208.5

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc--cCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS--QLTD   97 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~   97 (397)
                      +|||||||||||++|+++|++     . |++|++++|.....       .....+++++.+|++|.+++.++++  ++|.
T Consensus         2 kvlVTGasG~iG~~l~~~L~~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIK-----NTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHH-----HCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             EEEEECCCchHhHHHHHHHHh-----cCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCE
Confidence            799999999999999999998     5 79999999965211       1112478899999999999999998  8999


Q ss_pred             eeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcc-------eEEEecCCccccccccccC-CCCCCCCCCC
Q 015961           98 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLR-------HVCLQTGTKHYLGPFEAFG-KIKPYDPPFT  167 (397)
Q Consensus        98 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~-------~~~~~s~~~~y~ss~~~~g-~~~~~~~~~~  167 (397)
                      |+|+|+.....  ..++...+++|+.|+.+++++|.+...+++       +|+++||..+|+......+ .......+++
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~  156 (361)
T 1kew_A           77 VMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT  156 (361)
T ss_dssp             EEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred             EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence            99997643211  125677889999999999999987611254       8898887766653210000 0000112678


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          168 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       168 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                      |+.|..+...  |+.     |+++..+. ++.+++++++||+.|||+... ...+...+..  .+.  .+.++.+.+++.
T Consensus       157 E~~~~~~~~~--Y~~sK~~~e~~~~~~~-~~~gi~~~~vrp~~v~G~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~~~  228 (361)
T 1kew_A          157 ETTAYAPSSP--YSASKASSDHLVRAWR-RTYGLPTIVTNCSNNYGPYHF-PEKLIPLVIL--NAL--EGKPLPIYGKGD  228 (361)
T ss_dssp             TTSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEESTTCC-TTSHHHHHHH--HHH--HTCCEEEETTSC
T ss_pred             CCCCCCCCCc--cHHHHHHHHHHHHHHH-HHhCCcEEEEeeceeECCCCC-cccHHHHHHH--HHH--cCCCceEcCCCc
Confidence            8877655433  664     55555543 445899999999999995321 1122222211  111  255556667666


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  322 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (397)
                      +...++++.|   +|.+++.++.. ...|++||++++..+|+.|+++.+++.+|.+.+..           .  ++.+.+
T Consensus       229 ~~~~~i~v~D---va~a~~~~~~~-~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~-----------~--p~~~~~  291 (361)
T 1kew_A          229 QIRDWLYVED---HARALHMVVTE-GKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKA-----------T--SYREQI  291 (361)
T ss_dssp             CEEEEEEHHH---HHHHHHHHHHH-CCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCS-----------S--CGGGGE
T ss_pred             eeEeeEEHHH---HHHHHHHHHhC-CCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccc-----------c--ccccce
Confidence            6666665555   47777776654 34688999999999999999999999998754321           1  110000


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      .            +  .+..    ..        ....+.+|++|+++ |||+|.++++|+|+++++|++++
T Consensus       292 ~------------~--~~~~----~~--------~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          292 T------------Y--VADR----PG--------HDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             E------------E--ECCC----TT--------CCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             e------------e--cCCC----Cc--------ccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence            0            0  0000    00        00144689999986 79999999999999999999875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=5.9e-33  Score=262.26  Aligned_cols=301  Identities=17%  Similarity=0.152  Sum_probs=198.2

Q ss_pred             cccccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCH
Q 015961           12 ARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDP   85 (397)
Q Consensus        12 ~~~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~   85 (397)
                      ++++++...-++.++++|||||||||||++|+++|++     .|++|++++|.....      +....+++++.+|+.+.
T Consensus        13 ~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~   87 (343)
T 2b69_A           13 GRENLYFQGHMEKDRKRILITGGAGFVGSHLTDKLMM-----DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP   87 (343)
T ss_dssp             --------------CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC
T ss_pred             cccccccccccccCCCEEEEEcCccHHHHHHHHHHHH-----CCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh
Confidence            3455554454555568999999999999999999998     799999999964321      11235789999999885


Q ss_pred             HHHHHHHccCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           86 EETQAKLSQLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        86 ~~l~~~~~~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                      .     +.++|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  + +++++||..+|+..         ..
T Consensus        88 ~-----~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~-~~v~~SS~~v~g~~---------~~  150 (343)
T 2b69_A           88 L-----YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--A-RLLLASTSEVYGDP---------EV  150 (343)
T ss_dssp             C-----CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--C-EEEEEEEGGGGBSC---------SS
T ss_pred             h-----hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--C-cEEEECcHHHhCCC---------CC
Confidence            3     56788899997643221  23567788999999999999998864  3 78888876655432         13


Q ss_pred             CCCCCCC-----CCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc-chhHHHHHHHHHHhhhcC
Q 015961          164 PPFTEDM-----PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEG  232 (397)
Q Consensus       164 ~~~~E~~-----p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~  232 (397)
                      .+++|+.     |..|  ...|+.     |+++..+. ++.+++++++||+.|||+..... ......+..  .+.  .+
T Consensus       151 ~~~~E~~~~~~~~~~~--~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~--~~~--~~  223 (343)
T 2b69_A          151 HPQSEDYWGHVNPIGP--RACYDEGKRVAETMCYAYM-KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFIL--QAL--QG  223 (343)
T ss_dssp             SSBCTTCCCBCCSSST--THHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTCCTTCCCHHHHHHH--HHH--HT
T ss_pred             CCCcccccccCCCCCC--CCchHHHHHHHHHHHHHHH-HHhCCcEEEEEEcceeCcCCCCCcccHHHHHHH--HHH--cC
Confidence            4556653     3222  234664     45554443 45689999999999999543211 122222211  111  25


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCC
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGG  312 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  312 (397)
                      .++.+.+++.+.+.++++.|   +|++++.++..+  .+++||+++++.+|++|+++.+++.+|.+.....         
T Consensus       224 ~~~~~~~~~~~~~~~v~v~D---va~a~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~---------  289 (343)
T 2b69_A          224 EPLTVYGSGSQTRAFQYVSD---LVNGLVALMNSN--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQF---------  289 (343)
T ss_dssp             CCEEEESSSCCEEECEEHHH---HHHHHHHHHTSS--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEE---------
T ss_pred             CCceEcCCCCeEEeeEeHHH---HHHHHHHHHhcC--CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCcee---------
Confidence            56566677666666665554   577777766543  3679999999999999999999999997643210         


Q ss_pred             ccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHh
Q 015961          313 TQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  391 (397)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~  391 (397)
                       .+..                      ..   .            .....+|++|+++ |||+|.++++|+|+++++|++
T Consensus       290 -~p~~----------------------~~---~------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~  331 (343)
T 2b69_A          290 -LSEA----------------------QD---D------------PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR  331 (343)
T ss_dssp             -ECCC----------------------TT---C------------CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             -CCCC----------------------CC---C------------CceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence             0000                      00   0            0034579999985 799999999999999999997


Q ss_pred             cC
Q 015961          392 GF  393 (397)
Q Consensus       392 ~~  393 (397)
                      ++
T Consensus       332 ~~  333 (343)
T 2b69_A          332 KE  333 (343)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=1.5e-32  Score=263.32  Aligned_cols=299  Identities=14%  Similarity=0.093  Sum_probs=203.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCC--------CC-CceEEEccCCCHHHHH
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNA--------DH-LVEYVQCDVSDPEETQ   89 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~--------~~-~v~~~~~Dl~d~~~l~   89 (397)
                      ..|+++|||||||||||++|+++|++     .|++|++++|+....    ...        .+ +++++.+|++|.+++.
T Consensus        25 ~~M~k~vlVtGatG~IG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   99 (381)
T 1n7h_A           25 VEPRKIALITGITGQDGSYLTEFLLG-----KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLR   99 (381)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHH
T ss_pred             hhhCCeEEEEcCCchHHHHHHHHHHH-----CCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHH
Confidence            34557999999999999999999998     799999999976431    110        12 7889999999999999


Q ss_pred             HHHcc--CCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcc-----eEEEecCCccccccccccCCCC
Q 015961           90 AKLSQ--LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLR-----HVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        90 ~~~~~--~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~-----~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                      +++++  +|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  ++     +|+++||..+|+..        
T Consensus       100 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~--~~~~~~~~~v~~SS~~vyg~~--------  169 (381)
T 1n7h_A          100 RWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT--IDSGRTVKYYQAGSSEMFGST--------  169 (381)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH--HHHCCCCEEEEEEEGGGGTTS--------
T ss_pred             HHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC--CccCCccEEEEeCcHHHhCCC--------
Confidence            98886  58899997643221  12567788999999999999998753  33     88888876555432        


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHH-HHHHHH-HhhhcCC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA-LCVYAA-VCKHEGI  233 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~-i~~~~~~  233 (397)
                       .. +++|+++..|..  .|+.     |+++..+. ++.+++++++|+.++||++  ...++... +..++. +.+  +.
T Consensus       170 -~~-~~~E~~~~~~~~--~Y~~sK~~~E~~~~~~~-~~~~~~~~~~r~~~~~gp~--~~~~~~~~~~~~~~~~~~~--g~  240 (381)
T 1n7h_A          170 -PP-PQSETTPFHPRS--PYAASKCAAHWYTVNYR-EAYGLFACNGILFNHESPR--RGENFVTRKITRALGRIKV--GL  240 (381)
T ss_dssp             -CS-SBCTTSCCCCCS--HHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTT--SCTTSHHHHHHHHHHHHHH--TS
T ss_pred             -CC-CCCCCCCCCCCC--chHHHHHHHHHHHHHHH-HHhCCcEEEEEeCceeCCC--CCCcchhHHHHHHHHHHHc--CC
Confidence             12 778887765543  3665     44444443 4558999999999999953  32222111 111111 122  32


Q ss_pred             -CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCC
Q 015961          234 -PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGG  312 (397)
Q Consensus       234 -~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  312 (397)
                       +....|++.+.+.++++   +++|.+++.++..+.  +++||+++++.+|++|+++.+.+.+|.+....          
T Consensus       241 ~~~~~~g~~~~~~~~v~v---~Dva~a~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~----------  305 (381)
T 1n7h_A          241 QTKLFLGNLQASRDWGFA---GDYVEAMWLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDY----------  305 (381)
T ss_dssp             CCCEEESCTTCEEECEEH---HHHHHHHHHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGT----------
T ss_pred             CCeEEeCCCCceeeeEEH---HHHHHHHHHHHhCCC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccc----------
Confidence             23345666655555555   445888887776533  48999999999999999999999999753210          


Q ss_pred             ccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHh
Q 015961          313 TQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  391 (397)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~  391 (397)
                       ..+..                 ....+..               .....+|++|+++ |||+|.++++|+|+++++|++
T Consensus       306 -~~~~~-----------------~~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~  352 (381)
T 1n7h_A          306 -VEIDQ-----------------RYFRPAE---------------VDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDL  352 (381)
T ss_dssp             -EEECG-----------------GGSCSSC---------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             -cccCc-----------------ccCCccc---------------cccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHH
Confidence             00000                 0000000               0134579999986 799999999999999999987


Q ss_pred             cC
Q 015961          392 GF  393 (397)
Q Consensus       392 ~~  393 (397)
                      ++
T Consensus       353 ~~  354 (381)
T 1n7h_A          353 EL  354 (381)
T ss_dssp             HH
T ss_pred             hh
Confidence            64

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=4e-33  Score=263.64  Aligned_cols=305  Identities=15%  Similarity=0.143  Sum_probs=205.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHcc--CCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQ--LTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~   97 (397)
                      |+|||||||||||++|+++|++     .|++|++++|.....       .....+++++.+|++|.+++.+++++  +|.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALS-----QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHh-----CCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCE
Confidence            5899999999999999999998     899999999853211       00123588999999999999999988  999


Q ss_pred             eeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCc-ceEEEecCCccccccccc-cCCC------CCCCCCCC
Q 015961           98 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNL-RHVCLQTGTKHYLGPFEA-FGKI------KPYDPPFT  167 (397)
Q Consensus        98 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~~~~~s~~~~y~ss~~~-~g~~------~~~~~~~~  167 (397)
                      |+|+|+.....  ..++...+++|+.++.+++++|++.+  + .+|+++||..+|+..... +...      .....+++
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~--~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~  154 (347)
T 1orr_A           77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN--SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD  154 (347)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred             EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCceEEEeccHHHhCCCCcCCcccccccccccccccCcc
Confidence            99998643221  12567788999999999999999865  4 388888877766532100 0000      00012356


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--chhHHHHHHHHHHhhhc-C--CCcee
Q 015961          168 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--MNLVGALCVYAAVCKHE-G--IPLRF  237 (397)
Q Consensus       168 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~i~~~~-~--~~~~~  237 (397)
                      |+.+..+.  ..|+.     |+++..+. ++.|++++++||+.|||+.....  ......+..  .+.++. +  .++..
T Consensus       155 e~~~~~~~--~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  229 (347)
T 1orr_A          155 ESTQLDFH--SPYGCSKGAADQYMLDYA-RIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQ--KAVEIKNGINKPFTI  229 (347)
T ss_dssp             TTSCCCCC--HHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHH--HHHHHHTTCCCCEEE
T ss_pred             ccCCCCCC--CchHHHHHHHHHHHHHHH-HHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHH--HHHhCcccCCCCeEE
Confidence            66654443  33664     55555543 44589999999999999543211  111211111  111211 1  15556


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcC-CCCCCCceeccCCC--eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGD--VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ  314 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~-~~~~g~~yni~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~  314 (397)
                      .|++.+.+.++++.|+   |.+++.++.. ....|++||++++.  .+|++|+++.+.+.+|.+.....          .
T Consensus       230 ~g~g~~~~~~i~v~Dv---a~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~  296 (347)
T 1orr_A          230 SGNGKQVRDVLHAEDM---ISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTN----------L  296 (347)
T ss_dssp             ESSSCCEEECEEHHHH---HHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEE----------E
T ss_pred             ecCCcceEeeEEHHHH---HHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCcee----------C
Confidence            7777766666665554   7777776654 23467899999886  59999999999999997643210          0


Q ss_pred             ccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          315 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      +.                      .+..               .....+|++|+++ |||+|.++++|+|+++++|+++.
T Consensus       297 ~~----------------------~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  339 (347)
T 1orr_A          297 PV----------------------RESD---------------QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI  339 (347)
T ss_dssp             CC----------------------CSSC---------------CSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             CC----------------------CCCC---------------cceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHH
Confidence            00                      0000               0134579999975 79999999999999999999864

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=6.5e-33  Score=256.83  Aligned_cols=291  Identities=13%  Similarity=0.069  Sum_probs=199.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV  104 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~~  104 (397)
                      |+|||||||||||++|+++|++      |++|++++|++.          ++.+|++|.+++.+++++  +|.|+|+|+.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~------g~~V~~~~r~~~----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   64 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLAP------VGNLIALDVHSK----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTT------TSEEEEECTTCS----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhhc------CCeEEEeccccc----------cccccCCCHHHHHHHHHhcCCCEEEECccc
Confidence            3799999999999999999993      789999999741          347999999999999987  8889999875


Q ss_pred             ccc--CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          105 TWT--NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       105 ~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      ...  ...++.+.+++|+.++.+++++|++.+  + +++++||..+|+..         ...+++|+++..|..  .|+.
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~-~~v~~SS~~vy~~~---------~~~~~~E~~~~~p~~--~Y~~  130 (299)
T 1n2s_A           65 TAVDKAESEPELAQLLNATSVEAIAKAANETG--A-WVVHYSTDYVFPGT---------GDIPWQETDATSPLN--VYGK  130 (299)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--C-EEEEEEEGGGSCCC---------TTCCBCTTSCCCCSS--HHHH
T ss_pred             CCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC--C-cEEEEecccEEeCC---------CCCCCCCCCCCCCcc--HHHH
Confidence            332  124678889999999999999998764  4 68888876555432         245778888766543  4776


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961          183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  262 (397)
Q Consensus       183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~  262 (397)
                      .|...+...+....+++++||+.+||+...   ++...+...  +.  .+.++...|+  +...++++   +++|++++.
T Consensus       131 sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~---~~~~~~~~~--~~--~~~~~~~~~~--~~~~~i~v---~Dva~~~~~  198 (299)
T 1n2s_A          131 TKLAGEKALQDNCPKHLIFRTSWVYAGKGN---NFAKTMLRL--AK--ERQTLSVIND--QYGAPTGA---ELLADCTAH  198 (299)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEECSEECSSSC---CHHHHHHHH--HH--HCSEEEEECS--CEECCEEH---HHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCeEEEeeeeecCCCcC---cHHHHHHHH--Hh--cCCCEEeecC--cccCCeeH---HHHHHHHHH
Confidence            665555443333458999999999995322   222222111  11  2445444554  34445544   555777777


Q ss_pred             HhcCC--CC-CCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCC
Q 015961          263 AAVDP--YA-KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  339 (397)
Q Consensus       263 ~~~~~--~~-~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (397)
                      ++.++  .. .+++||+++++.+|++|+++.+.+.+|.+.+.++.+.      -.+.+..               .++. 
T Consensus       199 ~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~---------------~~~~-  256 (299)
T 1n2s_A          199 AIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTE------LNAVPTS---------------AYPT-  256 (299)
T ss_dssp             HHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCE------EEEECST---------------TSCC-
T ss_pred             HHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCcccccccc------ccccccc---------------cccC-
Confidence            66553  22 4789999999999999999999999987643211000      0000000               0000 


Q ss_pred             cccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961          340 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~~  396 (397)
                        ...            ...+..+|++|+++ |||+|. +++|+|+++++|+++.+.|
T Consensus       257 --~~~------------~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~~i  299 (299)
T 1n2s_A          257 --PAS------------RPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTTTTI  299 (299)
T ss_dssp             --SSC------------CCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCCC-
T ss_pred             --cCC------------CCCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Confidence              000            00145689999986 699997 8999999999999987754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.5e-32  Score=258.90  Aligned_cols=296  Identities=15%  Similarity=0.084  Sum_probs=199.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--------CCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------ADHLVEYVQCDVSDPEETQAKLSQ--LT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~~~~v~~~~~Dl~d~~~l~~~~~~--~~   96 (397)
                      ++|||||||||||++|+++|++     +|++|++++|.......        ...+++++.+|++|++++.+++++  +|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D   75 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQ-----NGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAID   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCC
Confidence            3799999999999999999998     89999999875322100        013578899999999999888874  78


Q ss_pred             CeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+.....  ..++.+.+++|+.++.+++++|++.+  +++++++||..+|+..         ...+++|+.+..|
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~g~~---------~~~~~~e~~~~~~  144 (338)
T 1udb_A           76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGDN---------PKIPYVESFPTGT  144 (338)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSC---------CSSSBCTTSCCCC
T ss_pred             EEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEEccHHHhCCC---------CCCCcCcccCCCC
Confidence            899997643211  12456788999999999999998754  6788888876655431         2456778776544


Q ss_pred             CCCcchhH-----HHHHHHHHhcCC-CeeEEEEcCCceeeccCCC---------cchhHHHHHHHHHHhhhcCCCceecC
Q 015961          175 APNFYYTL-----EDILFEEVEKKE-ELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKHEGIPLRFPG  239 (397)
Q Consensus       175 ~~~~~y~~-----e~~l~~~~~~~~-g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~g  239 (397)
                      . ...|+.     |+++..+. ++. +++++++||+++||+.+..         ..++...+   .....+.+.++...|
T Consensus       145 ~-~~~Y~~sK~~~e~~~~~~~-~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g  219 (338)
T 1udb_A          145 P-QSPYGKSKLMVEQILTDLQ-KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI---AQVAVGRRDSLAIFG  219 (338)
T ss_dssp             C-SSHHHHHHHHHHHHHHHHH-HHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHH---HHHHHTSSSCEEEEC
T ss_pred             C-CChHHHHHHHHHHHHHHHH-HhcCCCceEEEeeceecCCCcccccccccccchhhHHHHH---HHHHHhcCCCcEEec
Confidence            2 223664     45554443 333 7999999999999964311         11222222   111222233343333


Q ss_pred             ------CccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCC
Q 015961          240 ------TKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGG  311 (397)
Q Consensus       240 ------~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  311 (397)
                            ++.+.++++|+.|   +|.+++.++...  ...+++||+++++.+|++|+++.+++.+|.+.+...        
T Consensus       220 ~~~~~~~g~~~~~~i~v~D---va~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~--------  288 (338)
T 1udb_A          220 NDYPTEDGTGVRDYIHVMD---LADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF--------  288 (338)
T ss_dssp             SCSSSSSSSCEECEEEHHH---HHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEE--------
T ss_pred             CcccCCCCceeeeeEEHHH---HHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCccee--------
Confidence                  3344455555555   467666655432  222479999999999999999999999997532100        


Q ss_pred             CccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHH
Q 015961          312 GTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV  390 (397)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~  390 (397)
                          .+                    ..+.   .            .....+|++|+++ |||+|.++++|+|+++++|+
T Consensus       289 ----~~--------------------~~~~---~------------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~  329 (338)
T 1udb_A          289 ----AP--------------------RREG---D------------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQ  329 (338)
T ss_dssp             ----EC--------------------CCTT---C------------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred             ----CC--------------------CCCC---c------------hhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHH
Confidence                00                    0000   0            0134579999975 79999999999999999999


Q ss_pred             hcC
Q 015961          391 KGF  393 (397)
Q Consensus       391 ~~~  393 (397)
                      +++
T Consensus       330 ~~~  332 (338)
T 1udb_A          330 SRH  332 (338)
T ss_dssp             HHC
T ss_pred             Hhc
Confidence            875

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-32  Score=257.78  Aligned_cols=314  Identities=16%  Similarity=0.095  Sum_probs=203.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CC--------CCCCceEEEccCCCHHHHHHHHcc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN--------ADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~--------~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      |+|||||||||||++|+++|++     +|++|++++|++...    ..        ...+++++.+|++|.+++.+++++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLE-----KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE   76 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHH-----CCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHh
Confidence            6899999999999999999998     799999999975421    10        024688999999999999998886


Q ss_pred             --CCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           95 --LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        95 --~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                        +|.|+|+|+.....  ..++...+++|+.++.+++++|++.+. +..+|+++||..+|+..         ...+++|+
T Consensus        77 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~---------~~~~~~E~  147 (372)
T 1db3_A           77 VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLV---------QEIPQKET  147 (372)
T ss_dssp             HCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTC---------CSSSBCTT
T ss_pred             cCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCC---------CCCCCCcc
Confidence              58899998754332  235677889999999999999988631 11688888876555432         13467888


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHH-HhhhcCC-CceecCCc
Q 015961          170 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAA-VCKHEGI-PLRFPGTK  241 (397)
Q Consensus       170 ~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~-i~~~~~~-~~~~~g~~  241 (397)
                      .+..|..  .|+.     |.++..+. ++.+++++++|+..+||+..+  .++. ..+..++. +.  .+. +....|++
T Consensus       148 ~~~~~~~--~Y~~sK~~~e~~~~~~~-~~~~~~~~~~r~~~~~gp~~~--~~~~~~~~~~~~~~~~--~g~~~~~~~g~~  220 (372)
T 1db3_A          148 TPFYPRS--PYAVAKLYAYWITVNYR-ESYGMYACNGILFNHESPRRG--ETFVTRKITRAIANIA--QGLESCLYLGNM  220 (372)
T ss_dssp             SCCCCCS--HHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTSC--TTSHHHHHHHHHHHHH--TTSCCCEEESCT
T ss_pred             CCCCCCC--hHHHHHHHHHHHHHHHH-HHhCCCeEEEEECCccCCCCC--CcchhhHHHHHHHHHH--cCCCCceeecCC
Confidence            7766543  3664     44444443 456899999999999995332  2221 11111111 12  233 33446666


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccC-H--
Q 015961          242 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK-L--  318 (397)
Q Consensus       242 ~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~--  318 (397)
                      .+.++++++.|   +|++++.++..+.  +++||+++++.+|+.|+++.+.+.+|.+......+        .|.. +  
T Consensus       221 ~~~~~~i~v~D---va~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--------~p~~~~~~  287 (372)
T 1db3_A          221 DSLRDWGHAKD---YVKMQWMMLQQEQ--PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTG--------VEEKGIVV  287 (372)
T ss_dssp             TCEECCEEHHH---HHHHHHHTTSSSS--CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCG--------GGCEEEEE
T ss_pred             CceeeeeEHHH---HHHHHHHHHhcCC--CceEEEcCCCceeHHHHHHHHHHHhCCCccccccc--------cccccccc
Confidence            66666665555   5788777665432  57899999999999999999999999753210000        0000 0  


Q ss_pred             ----HH----HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHH
Q 015961          319 ----AE----FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDK  389 (397)
Q Consensus       319 ----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~  389 (397)
                          .+    ++....         ..+.+..+..          .......+|++|+++ |||+|.++++|+|+++++|
T Consensus       288 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~  348 (372)
T 1db3_A          288 SVTGHDAPGVKPGDVI---------IAVDPRYFRP----------AEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAN  348 (372)
T ss_dssp             EECSSSCTTCCTTCEE---------EEECGGGCCC----------CC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred             ccccccccccccccce---------eeccccccCC----------CchhhhccCHHHHHHHhCCccccCHHHHHHHHHHH
Confidence                00    000000         0000000000          000145679999986 7999999999999999999


Q ss_pred             HhcC
Q 015961          390 VKGF  393 (397)
Q Consensus       390 ~~~~  393 (397)
                      ++++
T Consensus       349 ~~~~  352 (372)
T 1db3_A          349 DLEA  352 (372)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.4e-32  Score=257.95  Aligned_cols=304  Identities=13%  Similarity=0.066  Sum_probs=205.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCC-------cEEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHHHHc-cC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-------WKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLS-QL   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-------~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~-~~   95 (397)
                      ++|+|||||||||||++|+++|++     +|       ++|++++|+...... ...+++++.+|++|.+++.+++. ++
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~-----~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   87 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVK-----DGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARP   87 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHH-----HCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCC
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHh-----cCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCC
Confidence            446899999999999999999998     78       899999997643211 23468899999999999998884 89


Q ss_pred             CCeeEEEEecccC-CCcHHHHHHhHHHHHHHHHHHHcccCC---CcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTN-RSTEAENCKINGSMFRNVLRAVIPNAP---NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        96 ~~V~h~a~~~~~~-~~~~~~~~~~nv~gt~~ll~a~~~~~~---~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      |.|+|+|+..... ..++...+++|+.|+.+++++|++.+.   .+.+|+++||..+|+..         ...+++|++|
T Consensus        88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---------~~~~~~E~~~  158 (342)
T 2hrz_A           88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP---------LPYPIPDEFH  158 (342)
T ss_dssp             SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS---------CCSSBCTTCC
T ss_pred             CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC---------CCCCcCCCCC
Confidence            9999998743211 125677889999999999999987531   26788888876555321         1356788887


Q ss_pred             CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceee-ccCCC-c-chhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961          172 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFG-FSPYS-L-MNLVGALCVYAAVCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G-~~~~~-~-~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  243 (397)
                      ..|...  |+.     |+++.++. ++.+++.+++|++.||| ++... . ..+...+   +... ..+.++.+++.+..
T Consensus       159 ~~~~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~  231 (342)
T 2hrz_A          159 TTPLTS--YGTQKAICELLLSDYS-RRGFFDGIGIRLPTICIRPGKPNAAASGFFSNI---LREP-LVGQEAVLPVPESI  231 (342)
T ss_dssp             CCCSSH--HHHHHHHHHHHHHHHH-HTTSCEEEEEEECEETTCCSSCCCSGGGHHHHH---HHHH-HTTCCEEECSCTTC
T ss_pred             CCCcch--HHHHHHHHHHHHHHHH-HhcCCCceeEEeeeEEecCCCCcchhHHHHHHH---HHHH-hcCCCeeccCCCcc
Confidence            665433  654     55555554 55689999999999998 43211 1 1122211   1101 12455445554443


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCC---CCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961          244 WECYSIASDADLIAEHQIWAAVDPYA---KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  320 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~~~~---~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
                      ...++   +++++|++++.++..+..   .+++||++ +..+|++|+++.+.+.+|.+......         ..... .
T Consensus       232 ~~~~~---~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~---------~~~~~-~  297 (342)
T 2hrz_A          232 RHWHA---SPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIR---------REPNE-M  297 (342)
T ss_dssp             EEEEE---CHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEE---------ECCCH-H
T ss_pred             ceeeE---ehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCccccccee---------eccCc-c
Confidence            33344   455557787777765432   57899996 57899999999999999975321000         00000 0


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCC
Q 015961          321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKI  395 (397)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~  395 (397)
                              ...+   .          ..|          ...+|++|+++|||+|.++++|+|+++++|++ -|.
T Consensus       298 --------~~~~---~----------~~~----------~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~-~~~  340 (342)
T 2hrz_A          298 --------IMRM---C----------EGW----------APGFEAKRARELGFTAESSFEEIIQVHIEDEL-GGS  340 (342)
T ss_dssp             --------HHHH---H----------TTS----------CCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS-TTC
T ss_pred             --------hhhh---h----------ccc----------ccccChHHHHHcCCCCCCCHHHHHHHHHHHhc-CCC
Confidence                    0000   0          000          22479999988999999999999999999998 444

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=5.1e-32  Score=253.39  Aligned_cols=299  Identities=12%  Similarity=0.062  Sum_probs=190.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC-CCCC--CC-----CC--CCCceEEEccCCCHHHHHHHHccC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR-RPKP--NW-----NA--DHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R-~~~~--~~-----~~--~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      +|+|||||||||||++|+++|++     +|++|++++| ++..  ..     ..  ..+++++.+|++|++++.++++++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   75 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLE-----NGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGC   75 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC
T ss_pred             CCEEEEECChhHHHHHHHHHHHH-----CCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCC
Confidence            47899999999999999999998     8999999998 5422  00     00  024678899999999999999999


Q ss_pred             CCeeEEEEecccCCCc-HHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNRST-EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~-~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      |.|+|+|+.......+ ..+.+++|+.|+.+++++|++. .++++|+++||...+.      +.. ....+++|+.+..+
T Consensus        76 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~-~~~~~iV~~SS~~~~~------~~~-~~~~~~~e~~~~~~  147 (322)
T 2p4h_X           76 VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNS-KTVKRFIYTSSGSAVS------FNG-KDKDVLDESDWSDV  147 (322)
T ss_dssp             SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTC-SSCCEEEEEEEGGGTS------CSS-SCCSEECTTCCCCH
T ss_pred             CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccHHHcc------cCC-CCCeecCCccccch
Confidence            9999998532111112 2348899999999999999875 2378899888754321      110 01234566543210


Q ss_pred             ------CCC-cchhHHH-----HHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          175 ------APN-FYYTLED-----ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       175 ------~~~-~~y~~e~-----~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                            .+. ..|+..|     ++.++. +..|++++++||++|||+.......  ..+.......  .+.+..++.  .
T Consensus       148 ~~~~~~~p~~~~Y~~sK~~~e~~~~~~~-~~~gi~~~~lrp~~v~g~~~~~~~~--~~~~~~~~~~--~g~~~~~~~--~  220 (322)
T 2p4h_X          148 DLLRSVKPFGWNYAVSKTLAEKAVLEFG-EQNGIDVVTLILPFIVGRFVCPKLP--DSIEKALVLV--LGKKEQIGV--T  220 (322)
T ss_dssp             HHHHHHCCTTHHHHHHHHHHHHHHHHHH-HHTTCCEEEEEECEEESCCCSSSCC--HHHHHHTHHH--HSCGGGCCE--E
T ss_pred             hhhcccCcccccHHHHHHHHHHHHHHHH-HhcCCcEEEEcCCceECCCCCCCCC--chHHHHHHHH--hCCCccCcC--C
Confidence                  111 1376544     444443 4578999999999999953221111  1111111111  132222221  1


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  322 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (397)
                      + .   +..+++++|.+++.++..+...| .|| +++..+|++|+++.+.+.++..  .++            ...    
T Consensus       221 ~-~---~~i~v~Dva~a~~~~~~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~~~--~~~------------~~~----  276 (322)
T 2p4h_X          221 R-F---HMVHVDDVARAHIYLLENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYPEY--QIL------------TVD----  276 (322)
T ss_dssp             E-E---EEEEHHHHHHHHHHHHHSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCTTS--CCC------------CTT----
T ss_pred             C-c---CEEEHHHHHHHHHHHhhCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCCCC--CCC------------CCc----
Confidence            1 1   44455556888887776544445 499 5678899999999998876421  111            000    


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961          323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~  396 (397)
                       .           +  ..  ...           . .+..+|++|+++|||+|.++++|+|+++++|+++.|+|
T Consensus       277 -~-----------~--~~--~~~-----------~-~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  322 (322)
T 2p4h_X          277 -E-----------L--KE--IKG-----------A-RLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL  322 (322)
T ss_dssp             -T-----------T--TT--CCC-----------E-ECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred             -c-----------c--cC--CCC-----------C-cceecccHHHHHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence             0           0  00  000           0 13457999998899999999999999999999998875

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=7.9e-32  Score=251.61  Aligned_cols=291  Identities=13%  Similarity=0.112  Sum_probs=199.8

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCeeEEEE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIFY  103 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~a~  103 (397)
                      +|||||||||||++|+++|++     .  |++|++++|+....    .+++++.+|++|.+++.++++  ++|.|+|+|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~   71 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAE-----KYGKKNVIASDIVQRDT----GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAG   71 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHH-----HHCGGGEEEEESSCCCC----TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHH-----hcCCCEEEEecCCCccc----cCceEEEecCCCHHHHHHHHhhcCCcEEEECCc
Confidence            599999999999999999998     6  78999999975432    267899999999999999988  7889999976


Q ss_pred             ecccC-CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          104 VTWTN-RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       104 ~~~~~-~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      ..... ..++...+++|+.++.+++++|++.+  +++++++||..+|+..       . ...+..|+.+..|...  |+.
T Consensus        72 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~~~-------~-~~~~~~e~~~~~p~~~--Y~~  139 (317)
T 3ajr_A           72 ILSAKGEKDPALAYKVNMNGTYNILEAAKQHR--VEKVVIPSTIGVFGPE-------T-PKNKVPSITITRPRTM--FGV  139 (317)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCCTT-------S-CSSSBCSSSCCCCCSH--HHH
T ss_pred             ccCCccccChHHHhhhhhHHHHHHHHHHHHcC--CCEEEEecCHHHhCCC-------C-CCCCccccccCCCCch--HHH
Confidence            43221 13567788999999999999998753  7789988876665432       0 1235567666555433  664


Q ss_pred             -----HHHHHHHHhcCCCeeEEEEcCCceeecc--CCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 015961          183 -----EDILFEEVEKKEELSWSVHRPDTIFGFS--PYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD  254 (397)
Q Consensus       183 -----e~~l~~~~~~~~g~~~~ilRp~~v~G~~--~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~  254 (397)
                           |+++..+. ++.+++++++||+.+||+.  ++. ..++....  +....  .+.++..++++.+.+.++++.|  
T Consensus       140 sK~~~e~~~~~~~-~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~i~v~D--  212 (317)
T 3ajr_A          140 TKIAAELLGQYYY-EKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEI--FYYAV--KREKYKCYLAPNRALPMMYMPD--  212 (317)
T ss_dssp             HHHHHHHHHHHHH-HHHCCEEEEEEECEEECSSSCCCSCSSTHHHHH--HHHHH--TTCCEEECSCTTCCEEEEEHHH--
T ss_pred             HHHHHHHHHHHHH-HhcCCeEEEEecCcEeccCCCCCCcchhHHHHH--HHHHH--hCCCceeecCccceeeeeEHHH--
Confidence                 45554443 4568999999999999953  221 11222111  11111  1234444555555566666555  


Q ss_pred             HHHHHHHHHhcCCCC---CCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHH
Q 015961          255 LIAEHQIWAAVDPYA---KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  331 (397)
Q Consensus       255 ~la~~~~~~~~~~~~---~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (397)
                       +|++++.++..+..   .+++||+++ ..+|++|+++.+.+.+|.....+           .+ ....          .
T Consensus       213 -va~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~i~~-----------~~-~~~~----------~  268 (317)
T 3ajr_A          213 -ALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPEFEIEY-----------KE-DFRD----------K  268 (317)
T ss_dssp             -HHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCSCCEEE-----------CC-CHHH----------H
T ss_pred             -HHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCcccccc-----------cc-ccch----------h
Confidence             47777777665432   358999986 68999999999999887321110           00 0000          0


Q ss_pred             HHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          332 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      + .            ..+          ...+|++|+++ |||+|.++++|+++++++|++++
T Consensus       269 ~-~------------~~~----------~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  308 (317)
T 3ajr_A          269 I-A------------ATW----------PESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEK  308 (317)
T ss_dssp             H-H------------TTS----------CSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             h-c------------ccc----------ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence            0 0            000          23479999986 79999999999999999999765

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=2.1e-31  Score=251.53  Aligned_cols=314  Identities=13%  Similarity=0.079  Sum_probs=206.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLSQ--LT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~~--~~   96 (397)
                      +|+|||||||||||++|+++|++     +|++|++++|++....       ....+++++.+|++|.+++.+++++  +|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   77 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLE-----KGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPD   77 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCC
Confidence            47899999999999999999998     8999999999764321       0123688999999999999998886  48


Q ss_pred             CeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+.....  ..++...+++|+.|+.+++++|.+.+. ..+|+++||..+|+..         ...+++|+.+..|
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~vyg~~---------~~~~~~e~~~~~~  147 (345)
T 2z1m_A           78 EVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKP-DTKFYQASTSEMFGKV---------QEIPQTEKTPFYP  147 (345)
T ss_dssp             EEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TCEEEEEEEGGGGCSC---------SSSSBCTTSCCCC
T ss_pred             EEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCC---------CCCCCCccCCCCC
Confidence            899998753321  235778899999999999999987541 2788888876655432         1346778777655


Q ss_pred             CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHH-HhhhcCC-CceecCCccccce
Q 015961          175 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAA-VCKHEGI-PLRFPGTKAAWEC  246 (397)
Q Consensus       175 ~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~-i~~~~~~-~~~~~g~~~~~~~  246 (397)
                      ...  |+.     |+++..+. ++.+++++++|+.++||+  +...+.. ..+..++. +.  .+. +....+++.+.++
T Consensus       148 ~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~r~~~~~gp--g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  220 (345)
T 2z1m_A          148 RSP--YAVAKLFGHWITVNYR-EAYNMFACSGILFNHESP--LRGIEFVTRKITYSLARIK--YGLQDKLVLGNLNAKRD  220 (345)
T ss_dssp             CSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECT--TSCTTSHHHHHHHHHHHHH--TTSCSCEEESCTTCEEC
T ss_pred             CCh--hHHHHHHHHHHHHHHH-HHhCCceEeeeeeeecCC--CCCCcchhHHHHHHHHHHH--cCCCCeeeeCCCCceee
Confidence            433  664     44444443 455899999999999995  4322211 11111111 11  132 2234565555555


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccch
Q 015961          247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE  326 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (397)
                      ++++   +++|++++.++..+.  +++||+++++.+|++|+++.+++.+|.+.....            .++..++....
T Consensus       221 ~~~v---~Dva~a~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~------------~~~p~~~~~~~  283 (345)
T 2z1m_A          221 WGYA---PEYVEAMWLMMQQPE--PDDYVIATGETHTVREFVEKAAKIAGFDIEWVG------------EGINEKGIDRN  283 (345)
T ss_dssp             CEEH---HHHHHHHHHHHTSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEES------------CGGGCEEEETT
T ss_pred             eEEH---HHHHHHHHHHHhCCC--CceEEEeCCCCccHHHHHHHHHHHhCCCccccc------------ccccccccccc
Confidence            5555   445888887775533  478999999999999999999999998642100            00000110000


Q ss_pred             HHHHHHHHH-hCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          327 GVWEEIVRE-NQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       327 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                           +... ....+.....          .......+|++|+++ |||+|.++++|+|+++++|+++.
T Consensus       284 -----~~~~~~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          284 -----TGKVIVEVSEEFFRP----------AEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             -----TCCEEEEECGGGSCS----------SCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             -----ccccccccCcccCCC----------CCcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence                 0000 0000000000          000144579999986 79999999999999999999753

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.98  E-value=3.7e-32  Score=250.16  Aligned_cols=278  Identities=16%  Similarity=0.096  Sum_probs=191.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      .|+++|||||| ||||++|+++|++     +|++|++++|++.... ....+++++.+|+.|.+     +.++|.|+|+|
T Consensus         3 ~m~~~ilVtGa-G~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a   71 (286)
T 3ius_A            3 AMTGTLLSFGH-GYTARVLSRALAP-----QGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLIST   71 (286)
T ss_dssp             --CCEEEEETC-CHHHHHHHHHHGG-----GTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred             CCcCcEEEECC-cHHHHHHHHHHHH-----CCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECC
Confidence            46689999998 9999999999999     8999999999864321 11257899999999954     78889999997


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      +....  ..         ..+++++++|++...++++++++||..+|+..         ...+++|+++..|..  .|+.
T Consensus        72 ~~~~~--~~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~---------~~~~~~E~~~~~p~~--~Y~~  129 (286)
T 3ius_A           72 APDSG--GD---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDH---------DGAWVDETTPLTPTA--ARGR  129 (286)
T ss_dssp             CCBTT--BC---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCC---------TTCEECTTSCCCCCS--HHHH
T ss_pred             Ccccc--cc---------HHHHHHHHHHHhhcCCceEEEEeecceecCCC---------CCCCcCCCCCCCCCC--HHHH
Confidence            64221  11         13568899998743357899988876655432         245678888876653  4887


Q ss_pred             HHHHHHHHhcCC-CeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 015961          183 EDILFEEVEKKE-ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI  261 (397)
Q Consensus       183 e~~l~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~  261 (397)
                      .|...+...+.. +++++++||+.+||+..+...    .+      .  .+.++.+.+. .+.+.++++.|   +|++++
T Consensus       130 sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~----~~------~--~~~~~~~~~~-~~~~~~i~v~D---va~a~~  193 (286)
T 3ius_A          130 WRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFS----KL------G--KGGIRRIIKP-GQVFSRIHVED---IAQVLA  193 (286)
T ss_dssp             HHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSST----TS------S--SSCCCEEECT-TCCBCEEEHHH---HHHHHH
T ss_pred             HHHHHHHHHHhhcCCCEEEEeccceECCCchHHH----HH------h--cCCccccCCC-CcccceEEHHH---HHHHHH
Confidence            666666554444 899999999999995422211    11      1  2444444444 34555655555   588888


Q ss_pred             HHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcc
Q 015961          262 WAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPT  341 (397)
Q Consensus       262 ~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (397)
                      .++.++. .+++||+++++.+|+.|+++.+++.+|.+.+...           +...    ....+.    ...      
T Consensus       194 ~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-----------~~~~----~~~~~~----~~~------  247 (286)
T 3ius_A          194 ASMARPD-PGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAV-----------DFDK----ADLTPM----ARS------  247 (286)
T ss_dssp             HHHHSCC-TTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEE-----------EGGG----SCCCHH----HHH------
T ss_pred             HHHhCCC-CCCEEEEeCCCCccHHHHHHHHHHHcCCCCCccc-----------chhh----hccChh----HHH------
Confidence            8777655 6789999999999999999999999998744210           0000    000000    000      


Q ss_pred             cccccccchhhhhhhcCcccccchhhHHH-cCCCCcc-CCHHHHHHHHHHH
Q 015961          342 RLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKV  390 (397)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~e~~~~~~~~~  390 (397)
                                    +...+..+|++|+++ |||+|.+ +++|+|+++++.+
T Consensus       248 --------------~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~~  284 (286)
T 3ius_A          248 --------------FYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQADA  284 (286)
T ss_dssp             --------------TTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHTC
T ss_pred             --------------hhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHhc
Confidence                          001145689999997 6999999 7999999998753

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.98  E-value=6e-32  Score=254.72  Aligned_cols=300  Identities=14%  Similarity=0.154  Sum_probs=193.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCC-CCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNA-DHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +++|||||||||||++|+++|++     +|++|++++|++...        ... ..+++++.+|++|.+++.++++++|
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   79 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLE-----RGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCT   79 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCS
T ss_pred             CCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCC
Confidence            47899999999999999999998     899999999976421        110 1247889999999999999999999


Q ss_pred             CeeEEEEecccCCCcH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC-
Q 015961           97 DVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD-  174 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~-  174 (397)
                      .|+|+|+.......++ .+.+++|+.|+.+++++|++.+ .+++|+++||...|      |+.. ....+++|+.+... 
T Consensus        80 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~------~~~~-~~~~~~~E~~~~~~~  151 (337)
T 2c29_D           80 GVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTV------NIQE-HQLPVYDESCWSDME  151 (337)
T ss_dssp             EEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGT------SCSS-SCCSEECTTCCCCHH
T ss_pred             EEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhc------ccCC-CCCcccCcccCCchh
Confidence            9999986432222233 4578999999999999998763 37889988875422      2210 01234556543210 


Q ss_pred             ------CCCcchhHHHH-----HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961          175 ------APNFYYTLEDI-----LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       175 ------~~~~~y~~e~~-----l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  243 (397)
                            .+...|+..|.     +.++. +..|++++++||++|||+.......  ..+.......  .+.+..+ +....
T Consensus       152 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~~lrp~~v~Gp~~~~~~~--~~~~~~~~~~--~g~~~~~-~~~~~  225 (337)
T 2c29_D          152 FCRAKKMTAWMYFVSKTLAEQAAWKYA-KENNIDFITIIPTLVVGPFIMSSMP--PSLITALSPI--TGNEAHY-SIIRQ  225 (337)
T ss_dssp             HHHHHCCTTHHHHHHHHHHHHHHHHHH-HHHTCCEEEEEECEEESCCSCSSCC--HHHHHHTHHH--HTCGGGH-HHHTE
T ss_pred             hhcccCCccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCceECCCCCCCCC--chHHHHHHHH--cCCCccc-cccCC
Confidence                  12234765444     43433 4468999999999999953222111  1111100001  1222111 11111


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhc
Q 015961          244 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  323 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (397)
                       ..++|   ++++|.++++++..+.. ++.|++++ ..+|++|+++.+.+.++....+              ..+    .
T Consensus       226 -~~~i~---v~Dva~a~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~--------------~~~----~  281 (337)
T 2c29_D          226 -GQFVH---LDDLCNAHIYLFENPKA-EGRYICSS-HDCIILDLAKMLREKYPEYNIP--------------TEF----K  281 (337)
T ss_dssp             -EEEEE---HHHHHHHHHHHHHCTTC-CEEEEECC-EEEEHHHHHHHHHHHCTTSCCC--------------SCC----T
T ss_pred             -CCEEE---HHHHHHHHHHHhcCccc-CceEEEeC-CCCCHHHHHHHHHHHCCCccCC--------------CCC----C
Confidence             12444   45557787777765433 45687654 5699999999999987421110              000    0


Q ss_pred             cchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961          324 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  397 (397)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~  397 (397)
                                   +.. ..               ..+..+|++|+++|||+|.++++|+++++++|+++.|++|
T Consensus       282 -------------~~~-~~---------------~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  326 (337)
T 2c29_D          282 -------------GVD-EN---------------LKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP  326 (337)
T ss_dssp             -------------TCC-TT---------------CCCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHTTSSC
T ss_pred             -------------ccc-CC---------------CccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHcCCCC
Confidence                         000 00               0134579999988999999999999999999999999875

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.98  E-value=2.2e-31  Score=274.39  Aligned_cols=303  Identities=15%  Similarity=0.117  Sum_probs=206.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc--c
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--Q   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~--~   94 (397)
                      ++|+|||||||||||++|+++|++     +|++|++++|......        ....+++++.+|++|++++.++++  +
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~   84 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIE-----NGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYK   84 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCC
Confidence            357999999999999999999998     8999999999754321        012468899999999999999988  7


Q ss_pred             CCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  172 (397)
Q Consensus        95 ~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~  172 (397)
                      +|.|+|+|+.....  ...+.+.+++|+.++.+++++|++.+  +++++++||..+|+... ..    +...+++|+.+.
T Consensus        85 ~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~~iV~~SS~~vyg~~~-~~----~~~~~~~E~~~~  157 (699)
T 1z45_A           85 IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDAT-RF----PNMIPIPEECPL  157 (699)
T ss_dssp             CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGG-GS----TTCCSBCTTSCC
T ss_pred             CCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECcHHHhCCCc-cc----cccCCccccCCC
Confidence            88899997643211  12456788999999999999998764  67899888777665321 00    112466777765


Q ss_pred             CCCCCcchhH-----HHHHHHHHhcC--CCeeEEEEcCCceeeccCCCc---------chhHHHHHHHHHHhhhcCCCce
Q 015961          173 LDAPNFYYTL-----EDILFEEVEKK--EELSWSVHRPDTIFGFSPYSL---------MNLVGALCVYAAVCKHEGIPLR  236 (397)
Q Consensus       173 ~~~~~~~y~~-----e~~l~~~~~~~--~g~~~~ilRp~~v~G~~~~~~---------~~~~~~~~~~~~i~~~~~~~~~  236 (397)
                      .|..  .|+.     |+++..+. ++  .+++++++||+.|||+.+...         .++...+   .....+.+.++.
T Consensus       158 ~p~~--~Y~~sK~~~E~~~~~~~-~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  231 (699)
T 1z45_A          158 GPTN--PYGHTKYAIENILNDLY-NSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYM---AQVAVGRREKLY  231 (699)
T ss_dssp             CCCS--HHHHHHHHHHHHHHHHH-HHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH---HHHHTTSSSCCC
T ss_pred             CCCC--hHHHHHHHHHHHHHHHH-HhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHH---HHHHhcCCCceE
Confidence            5543  3664     45554443 23  689999999999999754311         1222211   112222223444


Q ss_pred             ecC------CccccceeeecccHHHHHHHHHHHhcCC------CCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCc
Q 015961          237 FPG------TKAAWECYSIASDADLIAEHQIWAAVDP------YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSE  304 (397)
Q Consensus       237 ~~g------~~~~~~~~~~~~da~~la~~~~~~~~~~------~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~  304 (397)
                      +.|      ++.+.++++++.|+   |++++.++...      ...+++||+++++.+|++|+++.+++.+|.+.+... 
T Consensus       232 ~~g~~~~~~~g~~~~~~i~v~Dv---a~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~-  307 (699)
T 1z45_A          232 IFGDDYDSRDGTPIRDYIHVVDL---AKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV-  307 (699)
T ss_dssp             CC------CCSSCEECEEEHHHH---HHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---
T ss_pred             EeCCcccCCCCCeeEeeEEHHHH---HHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCcee-
Confidence            444      45555556655554   66666655421      223579999999999999999999999997643210 


Q ss_pred             hhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHH
Q 015961          305 EEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSF  383 (397)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~  383 (397)
                                 .+                ..    ....               ....+|++|+++ |||+|.++++|+|
T Consensus       308 -----------~~----------------~~----~~~~---------------~~~~~d~~ka~~~LG~~p~~~l~egl  341 (699)
T 1z45_A          308 -----------TG----------------RR----AGDV---------------LNLTAKPDRAKRELKWQTELQVEDSC  341 (699)
T ss_dssp             --------------------------------------C---------------CCCCBCCHHHHHHTCCCCCCCHHHHH
T ss_pred             -----------cC----------------CC----CCcc---------------ccccCCHHHHHHhcCCCCCCCHHHHH
Confidence                       00                00    0000               134579999985 7999999999999


Q ss_pred             HHHHHHHhcCCC
Q 015961          384 ITWIDKVKGFKI  395 (397)
Q Consensus       384 ~~~~~~~~~~~~  395 (397)
                      +++++|+++++.
T Consensus       342 ~~~~~w~~~~~~  353 (699)
T 1z45_A          342 KDLWKWTTENPF  353 (699)
T ss_dssp             HHHHHHHHHCTT
T ss_pred             HHHHHHHHhCCc
Confidence            999999987753

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.97  E-value=7.8e-31  Score=268.30  Aligned_cols=314  Identities=16%  Similarity=0.178  Sum_probs=210.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHH-HHHHHccCCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEE-TQAKLSQLTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~-l~~~~~~~~~V~h  100 (397)
                      ++++|||||||||||++|+++|++     . |++|++++|++...  .....+++++.+|++|.++ +..+++++|.|+|
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~-----~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLR-----EDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHH-----SSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHh-----cCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            457899999999999999999998     5 89999999976432  1123578999999999765 7778889999999


Q ss_pred             EEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC---CC-
Q 015961          101 IFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR---LD-  174 (397)
Q Consensus       101 ~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~---~~-  174 (397)
                      +|+.....  ..++.+.+++|+.++.+++++|++.+   ++++++||..+|+..         ...+++|+++.   .| 
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~r~V~~SS~~vyg~~---------~~~~~~E~~~~~~~~p~  456 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVYGMC---------SDKYFDEDHSNLIVGPV  456 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGGBTC---------CSSSBCTTTCCEEECCT
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC---CEEEEEecHHHcCCC---------CCcccCCCccccccCcc
Confidence            98753321  12567788999999999999998853   788988876666432         13456777652   11 


Q ss_pred             -CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc-------chhHHHHHHHHHHhhhcCCCceecCCc
Q 015961          175 -APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-------MNLVGALCVYAAVCKHEGIPLRFPGTK  241 (397)
Q Consensus       175 -~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~g~~  241 (397)
                       .+...|+.     |+++..+. ++.+++++++||++|||+.....       ......+..  .+.  .+.++..++++
T Consensus       457 ~~p~~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~--~~~--~g~~~~~~g~g  531 (660)
T 1z7e_A          457 NKPRWIYSVSKQLLDRVIWAYG-EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL--NLV--EGSPIKLIDGG  531 (660)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHH--HHH--HTCCEEEEGGG
T ss_pred             cCCCCCcHHHHHHHHHHHHHHH-HHcCCCEEEECCCcccCCCccccccccccccchHHHHHH--HHH--cCCCcEEeCCC
Confidence             12234665     44444443 45689999999999999543210       111212211  112  25566666666


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC-eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCH
Q 015961          242 AAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL  318 (397)
Q Consensus       242 ~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  318 (397)
                      .+.+.++++.|+   |.+++.++..+.  ..+++||+++++ .+|+.|+++.+.+.+|.+.....          .+...
T Consensus       532 ~~~~~~i~v~Dv---a~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~----------~p~~~  598 (660)
T 1z7e_A          532 KQKRCFTDIRDG---IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH----------FPPFA  598 (660)
T ss_dssp             CCEEECEEHHHH---HHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGG----------SCCCC
T ss_pred             CeEEEEEEHHHH---HHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccc----------cCccc
Confidence            666666665554   777777776543  467899999986 89999999999999986532210          00000


Q ss_pred             HHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCC
Q 015961          319 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI  395 (397)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~  395 (397)
                      ........       ..++..   ...            ..+..+|++|+++ |||+|.++++|+|+++++|++++.-
T Consensus       599 ~~~~~~~~-------~~~~~~---~~~------------~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~  654 (660)
T 1z7e_A          599 GFRVVESS-------SYYGKG---YQD------------VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_dssp             CEEEECTH-------HHHCTT---CCC------------CSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred             cccchhcc-------cccccc---ccc------------hhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence            00000000       000000   000            0145679999986 7999999999999999999998764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=1e-29  Score=252.66  Aligned_cols=288  Identities=14%  Similarity=0.079  Sum_probs=183.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      +|+|||||||||||++|+++|++     .|++|++++|++...       +.+.+|+.+.  +.+++.++|.|+|+|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~-----~G~~V~~l~R~~~~~-------~~v~~d~~~~--~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQT-----GGHEVIQLVRKEPKP-------GKRFWDPLNP--ASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESSSCCT-------TCEECCTTSC--CTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCCCCc-------cceeecccch--hHHhcCCCCEEEECCCCc
Confidence            46899999999999999999998     899999999986542       2367888654  345678899999998754


Q ss_pred             cc---CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          106 WT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       106 ~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      ..   ...++...+++|+.++.+|++++.+. .++++|+++||..+|+..      .  ...+++|+.+. +  ..+|+.
T Consensus       213 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~------~--~~~~~~E~~~~-~--~~~y~~  280 (516)
T 3oh8_A          213 IFGRFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHD------R--GDEILTEESES-G--DDFLAE  280 (516)
T ss_dssp             ----CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSE------E--EEEEECTTSCC-C--SSHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCC------C--CCCccCCCCCC-C--cChHHH
Confidence            32   12356778899999999999994332 247899999887766511      0  13466777765 2  233553


Q ss_pred             -----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHH
Q 015961          183 -----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIA  257 (397)
Q Consensus       183 -----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la  257 (397)
                           |+.+.. . +..|++++++||++|||+  +.  +....+   ....+ .+.. ...|++.+...++++.|+   |
T Consensus       281 ~~~~~E~~~~~-~-~~~gi~~~ilRp~~v~Gp--~~--~~~~~~---~~~~~-~g~~-~~~g~g~~~~~~i~v~Dv---a  346 (516)
T 3oh8_A          281 VCRDWEHATAP-A-SDAGKRVAFIRTGVALSG--RG--GMLPLL---KTLFS-TGLG-GKFGDGTSWFSWIAIDDL---T  346 (516)
T ss_dssp             HHHHHHHTTHH-H-HHTTCEEEEEEECEEEBT--TB--SHHHHH---HHTTC----C-CCCTTSCCEECEEEHHHH---H
T ss_pred             HHHHHHHHHHH-H-HhCCCCEEEEEeeEEECC--CC--ChHHHH---HHHHH-hCCC-cccCCCCceEceEeHHHH---H
Confidence                 333322 2 467899999999999994  32  122222   11111 1222 245667666666666554   7


Q ss_pred             HHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhC
Q 015961          258 EHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQ  337 (397)
Q Consensus       258 ~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (397)
                      .+++.++.++. .+++||+++++.+|++|+++.+++.+|.+...               .+..+....      .   ++
T Consensus       347 ~ai~~~l~~~~-~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~---------------~~p~~~~~~------~---~g  401 (516)
T 3oh8_A          347 DIYYRAIVDAQ-ISGPINAVAPNPVSNADMTKILATSMHRPAFI---------------QIPSLGPKI------L---LG  401 (516)
T ss_dssp             HHHHHHHHCTT-CCEEEEESCSCCEEHHHHHHHTTC--------------------------------------------
T ss_pred             HHHHHHHhCcc-cCCcEEEECCCCCCHHHHHHHHHHHhCCCCCC---------------CCCHHHHHH------H---hC
Confidence            88877776654 45689999999999999999999999976421               111111100      0   00


Q ss_pred             CCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccC-CHHHHHHHHHHH
Q 015961          338 LQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRN-SKNSFITWIDKV  390 (397)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~e~~~~~~~~~  390 (397)
                      -.       ..   ...  ...+...+.+|++++||+|.++ ++++|+++++..
T Consensus       402 ~~-------~~---~~~--~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~~  443 (516)
T 3oh8_A          402 SQ-------GA---EEL--ALASQRTAPAALENLSHTFRYTDIGAAIAHELGYE  443 (516)
T ss_dssp             -C-------CG---GGG--GGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTCC
T ss_pred             Cc-------hh---HHH--hhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCcc
Confidence            00       00   000  1113456889999999999998 999999988643

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.96  E-value=1.9e-29  Score=250.53  Aligned_cols=311  Identities=14%  Similarity=0.026  Sum_probs=198.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------------------CCCCCCceEEEccCCCHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------------WNADHLVEYVQCDVSDPE   86 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~~~~v~~~~~Dl~d~~   86 (397)
                      +++|||||||||||++|+++|++     .|++|++++|++...                   .....+++++.+|+.|++
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~-----~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  224 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQG-----YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  224 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBT-----TEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCS
T ss_pred             CCeEEEECCccchHHHHHHHHHh-----cCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccc
Confidence            47899999999999999999987     899999999986510                   001258999999999987


Q ss_pred             HHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           87 ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        87 ~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      .+. +..++|.|+|+|+... ...++...+++|+.++.+++++|++   +.++++++||..+ +.    +........++
T Consensus       225 ~l~-~~~~~D~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~v-G~----~~~~~~~~~~~  294 (508)
T 4f6l_B          225 DVV-LPENMDTIIHAGARTD-HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GT----YFDIDTEDVTF  294 (508)
T ss_dssp             SCC-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCT-TS----EECTTCSCCEE
T ss_pred             cCC-CccCCCEEEECCceec-CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhh-cc----CCccCCcCccc
Confidence            776 6678888999976432 2235677889999999999999987   3678888887665 21    11111235677


Q ss_pred             CCCCCCCCC-CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc--hhH-HHHHHHHHHhhhc-CCCce
Q 015961          167 TEDMPRLDA-PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM--NLV-GALCVYAAVCKHE-GIPLR  236 (397)
Q Consensus       167 ~E~~p~~~~-~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~--~~~-~~~~~~~~i~~~~-~~~~~  236 (397)
                      +|+++..+. +...|+.     |+++.++.  +.|++++|+||+.|||+..+...  +.. ..+..++  .... +..++
T Consensus       295 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~  370 (508)
T 4f6l_B          295 SEADVYKGQLLTSPYTRSKFYSELKVLEAV--NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVM--NDLLQLDCIG  370 (508)
T ss_dssp             CTTCSCSSBCCCSHHHHHHHHHHHHHHHHH--HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHH--HHHTTCSEEE
T ss_pred             ccccccccccCCCcHHHHHHHHHHHHHHHH--HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHH--HHHHHcCCCC
Confidence            888764321 3344765     45555432  36899999999999996543321  110 0111111  1111 22222


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcccc
Q 015961          237 FPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRV  316 (397)
Q Consensus       237 ~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  316 (397)
                       .+.+.+..   +..+++++|+++++++..+. .+++||+++++.+|+.|+++.+++.. .                ..+
T Consensus       371 -~~~g~~~~---~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~-~----------------~~~  428 (508)
T 4f6l_B          371 -VSMAEMPV---DFSFVDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE-I----------------ELV  428 (508)
T ss_dssp             -TTGGGSEE---ECEEHHHHHHHHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC-C----------------EEE
T ss_pred             -CCccCceE---EEEcHHHHHHHHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC-C----------------ccc
Confidence             23334444   44555666999988887655 78999999999999999999998754 1                234


Q ss_pred             CHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccch----hhHHHcCCCCccCCHHHHHHHHHHHhc
Q 015961          317 KLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASM----NKSKEHGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~k~~~lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                      +..+|....        .+.++.+  +   ..+..... .. ....+|.    ++++++||.+....++.+++.++++++
T Consensus       429 ~~~~w~~~l--------~~~~~~~--~---~~~~~~~~-~~-~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~  493 (508)
T 4f6l_B          429 SDESFNEIL--------QKQDMYE--T---IGLTSVDR-EQ-QLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT  493 (508)
T ss_dssp             CHHHHHHHH--------HTTCCHH--H---HHHHHTGG-GS-EECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHH--------HhcCCcc--c---hhcccccc-cC-cceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence            555555432        2112111  0   00000000 00 0223444    445678999888889999999998875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.96  E-value=1.2e-29  Score=239.16  Aligned_cols=298  Identities=15%  Similarity=0.111  Sum_probs=194.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--C------CCCCceEE-EccCCCHHHHHHHHcc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N------ADHLVEYV-QCDVSDPEETQAKLSQ   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~------~~~~v~~~-~~Dl~d~~~l~~~~~~   94 (397)
                      .++++|||||||||||++|+++|++     +|++|++++|+.....  .      ...+++++ .+|++|.+++.+++++
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   83 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLE-----HGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcC
Confidence            3457999999999999999999998     8999999999743210  0      01468888 8999999998888889


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC--
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR--  172 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~--  172 (397)
                      +|.|+|+|+.... ..++...+++|+.++.+++++|.+. .++++++++||..+|+...  -+   ....+++|+++.  
T Consensus        84 ~d~vih~A~~~~~-~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~~~~~~--~~---~~~~~~~E~~~~~~  156 (342)
T 1y1p_A           84 AAGVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPK--PN---VEGIYLDEKSWNLE  156 (342)
T ss_dssp             CSEEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCC--TT---CCCCEECTTCCCHH
T ss_pred             CCEEEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHHhcCCC--CC---CCCcccCccccCch
Confidence            9999999875432 2467788999999999999999853 2478999998766553210  00   002456776521  


Q ss_pred             -----------CC-CCCcchhH-----HHHHHHHHhcC--CCeeEEEEcCCceeeccCCCcc--hhHHHHHHHHHHhhhc
Q 015961          173 -----------LD-APNFYYTL-----EDILFEEVEKK--EELSWSVHRPDTIFGFSPYSLM--NLVGALCVYAAVCKHE  231 (397)
Q Consensus       173 -----------~~-~~~~~y~~-----e~~l~~~~~~~--~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~i~~~~  231 (397)
                                 .+ .+...|+.     |+++..+. ++  .+++++++||+.|||+......  +....+..  .+.  .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~--~~~--~  231 (342)
T 1y1p_A          157 SIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM-DENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMM--SLF--N  231 (342)
T ss_dssp             HHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHH-HHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHH--HHH--T
T ss_pred             hhhhhccccccccccchHHHHHHHHHHHHHHHHHH-HhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHH--HHH--c
Confidence                       01 11233664     44444443 22  3789999999999995332111  12222211  111  2


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCC
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGG  311 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  311 (397)
                      +.++.+.+.. +.+.++++.   ++|++++.++..+...|+.+ ++++..+|+.|+++.+.+.+|.+...  .       
T Consensus       232 ~~~~~~~~~~-~~~~~v~v~---Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~~~~--~-------  297 (342)
T 1y1p_A          232 GEVSPALALM-PPQYYVSAV---DIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSKTFP--A-------  297 (342)
T ss_dssp             TCCCHHHHTC-CSEEEEEHH---HHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTSCCC--C-------
T ss_pred             CCCccccccC-CcCCEeEHH---HHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCccCC--C-------
Confidence            4443333332 334555554   45788777776654455544 45667899999999999999865111  0       


Q ss_pred             CccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCC---CCccCCHHHHHHHH
Q 015961          312 GTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGF---SGFRNSKNSFITWI  387 (397)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~---~p~~~~~e~~~~~~  387 (397)
                         ..                      .. .     ..         ....+|++|+++ |||   .+.++++|+|++++
T Consensus       298 ---~~----------------------~~-~-----~~---------~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~  337 (342)
T 1y1p_A          298 ---DF----------------------PD-Q-----GQ---------DLSKFDTAPSLEILKSLGRPGWRSIEESIKDLV  337 (342)
T ss_dssp             ---CC----------------------CC-C-----CC---------CCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHH
T ss_pred             ---CC----------------------Cc-c-----cc---------ccccCChHHHHHHHhhcccCCcCCHHHHHHHHH
Confidence               00                      00 0     00         023469999986 587   57889999999999


Q ss_pred             HHHhc
Q 015961          388 DKVKG  392 (397)
Q Consensus       388 ~~~~~  392 (397)
                      +|+++
T Consensus       338 ~~~~~  342 (342)
T 1y1p_A          338 GSETA  342 (342)
T ss_dssp             CCSCC
T ss_pred             HHhhC
Confidence            98763

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=7.8e-29  Score=240.99  Aligned_cols=316  Identities=13%  Similarity=-0.004  Sum_probs=196.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------------------CCCCCCceEEEccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------------WNADHLVEYVQCDVSD   84 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~~~~v~~~~~Dl~d   84 (397)
                      ..+++|||||||||||++|+++|++     .|++|++++|++...                   .....++.++.+|++|
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d  141 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQG-----YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFEC  141 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTT-----TEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC--
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHc-----CCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCC
Confidence            3457899999999999999999988     899999999986510                   0012578999999999


Q ss_pred             HHHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           85 PEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        85 ~~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      ++.+. .+.++|.|+|+|+.... ..++...+++|+.|+.+++++|.+   .+++++++||..+ +..    ........
T Consensus       142 ~~~l~-~~~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~-G~~----~~~~~~~~  211 (427)
T 4f6c_A          142 MDDVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTY----FDIDTEDV  211 (427)
T ss_dssp             -CCCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGG-GSE----ECSSCSCC
T ss_pred             cccCC-CcCCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHh-CCC----ccCCCCCc
Confidence            87777 67788889999764322 235677889999999999999987   3678898887665 221    11112356


Q ss_pred             CCCCCCCCCCC-CCcchhHHHHHHHHHh---cCCCeeEEEEcCCceeeccCCCcc--hhH-HHHHHHHHHhhhcCCCcee
Q 015961          165 PFTEDMPRLDA-PNFYYTLEDILFEEVE---KKEELSWSVHRPDTIFGFSPYSLM--NLV-GALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       165 ~~~E~~p~~~~-~~~~y~~e~~l~~~~~---~~~g~~~~ilRp~~v~G~~~~~~~--~~~-~~~~~~~~i~~~~~~~~~~  237 (397)
                      +++|+++..+. +...|+..|...+...   .+.|++++++||++|||+......  +.. ..+..++.... .+.+++.
T Consensus       212 ~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  290 (427)
T 4f6c_A          212 TFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL-QLDCIGV  290 (427)
T ss_dssp             EECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHH-HSSEEEH
T ss_pred             cccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHH-hcCCCCC
Confidence            78888764322 3344765444433221   237899999999999996443221  110 01111111111 1222222


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccC
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK  317 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  317 (397)
                       +.+.....+   .+++++|++++.++..+. .+++||+++++.+|+.|+++.+++ +|.                ..++
T Consensus       291 -~~~~~~~~~---v~v~DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g~----------------~~~~  348 (427)
T 4f6c_A          291 -SMAEMPVDF---SFVDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KEI----------------ELVS  348 (427)
T ss_dssp             -HHHTCEECC---EEHHHHHHHHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SCC----------------EEEC
T ss_pred             -ccccceEEE---eeHHHHHHHHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cCC----------------cccC
Confidence             223333444   455556889888887665 889999999999999999999998 661                2345


Q ss_pred             HHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchh----hHHHcCCCCccCCHHHHHHHHHHHhc
Q 015961          318 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMN----KSKEHGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----k~~~lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                      ..+|...        ..+.++.+  +..   +.. +.. ......+|.+    +++++||.+....++.++++++++++
T Consensus       349 ~~~~~~~--------l~~~~~~~--~~~---~~~-~~~-~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~  412 (427)
T 4f6c_A          349 DESFNEI--------LQKQDMYE--TIG---LTS-VDR-EQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT  412 (427)
T ss_dssp             HHHHHHH--------HHHTTCHH--HHH---HHH-HHH-TSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHH--------HHhcCchh--hhh---hhh-ccc-cCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            5555443        22222211  100   000 000 0002234444    44567999888788899999988865

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=7.2e-28  Score=237.14  Aligned_cols=337  Identities=15%  Similarity=0.049  Sum_probs=205.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCC---CcEEEEEeCCCCCC--------CC--------------CCCCceEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGG---PWKVYGVARRPKPN--------WN--------------ADHLVEYV   78 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~---g~~V~~l~R~~~~~--------~~--------------~~~~v~~~   78 (397)
                      ..+|+|||||||||||++|+++|++     .   |++|++++|+....        ..              ...+++++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~-----~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v  145 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLR-----RLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVV  145 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHH-----HSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHh-----cCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEE
Confidence            3458999999999999999999998     5   89999999976421        00              01579999


Q ss_pred             EccCC------CHHHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccccc
Q 015961           79 QCDVS------DPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGP  152 (397)
Q Consensus        79 ~~Dl~------d~~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss  152 (397)
                      .+|++      |.+.+..+++++|.|+|+|+....  .++.+.+++|+.|+.+++++|++.+  +++|+++||..+|+..
T Consensus       146 ~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~~V~iSS~~v~~~~  221 (478)
T 4dqv_A          146 AGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTK--LKPFTYVSTADVGAAI  221 (478)
T ss_dssp             ECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSS--CCCEEEEEEGGGGTTS
T ss_pred             EeECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCC--CCeEEEEeehhhcCcc
Confidence            99998      667889999999999999875433  4556788999999999999998753  6788888876655431


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCC---------cchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccC-CCcchh
Q 015961          153 FEAFGKIKPYDPPFTEDMPRLDAPN---------FYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSP-YSLMNL  217 (397)
Q Consensus       153 ~~~~g~~~~~~~~~~E~~p~~~~~~---------~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~-~~~~~~  217 (397)
                               ...+++|+.+..|...         ..|+.     |+++.++. ++.|++++++||++|||++. ....+.
T Consensus       222 ---------~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~ivRpg~v~G~~~~~g~~~~  291 (478)
T 4dqv_A          222 ---------EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREAN-DLCALPVAVFRCGMILADTSYAGQLNM  291 (478)
T ss_dssp             ---------CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEECCSSSSSCCCT
T ss_pred             ---------CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHH-HHhCCCeEEEECceeeCCCccCCcCCH
Confidence                     1345667665332111         23665     44444443 34589999999999999643 111222


Q ss_pred             HHHHHHHHHHhhhcCC-CceecC---CccccceeeecccHHHHHHHHHHHhcC----CCCCCCceeccCCCe--eehHHH
Q 015961          218 VGALCVYAAVCKHEGI-PLRFPG---TKAAWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNGDV--FKWKHL  287 (397)
Q Consensus       218 ~~~~~~~~~i~~~~~~-~~~~~g---~~~~~~~~~~~~da~~la~~~~~~~~~----~~~~g~~yni~~~~~--~s~~el  287 (397)
                      ...+..++......+. |..+.+   ++.......+..+++++|++++.++..    +...+++||+++++.  +|++|+
T Consensus       292 ~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el  371 (478)
T 4dqv_A          292 SDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEY  371 (478)
T ss_dssp             TBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHH
T ss_pred             HHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHH
Confidence            1112112211112232 212221   111111233444555558888877765    456788999999988  999999


Q ss_pred             HHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHH---HHHHHhCCCcccccc----cccchhhhhhhcC--
Q 015961          288 WKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWE---EIVRENQLQPTRLDE----VGAWWFVDLVLTG--  358 (397)
Q Consensus       288 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--  358 (397)
                      ++.+++. |.+..             ...++.+|+........   .......+-+ -+..    ...|.  ..+...  
T Consensus       372 ~~~l~~~-g~~~~-------------~i~~~~~w~~~l~~~~~~~~~~~~~~~llp-ll~~~~~~~~~~~--~~~~~~~~  434 (478)
T 4dqv_A          372 VDWLIEA-GYPIR-------------RIDDFAEWLQRFEASLGALPDRQRRHSVLP-MLLASNSQRLQPL--KPTRGCSA  434 (478)
T ss_dssp             HHHHHHT-TCSCE-------------EESSHHHHHHHHHHHHHTSCHHHHHTSSST-TCC--CCCBCC--------CCSS
T ss_pred             HHHHHHc-CCCcc-------------cCCCHHHHHHHHHHHhccCccccccCcchh-HHHHhhccCCCCC--cccccCcc
Confidence            9999984 66532             22356777765422211   0011111110 0000    01220  000000  


Q ss_pred             cccccchhhHH-HcCCCC-----ccCCHHHHHHHHHHHhcCCCC
Q 015961          359 EAKLASMNKSK-EHGFSG-----FRNSKNSFITWIDKVKGFKIV  396 (397)
Q Consensus       359 ~~~~~d~~k~~-~lG~~p-----~~~~~e~~~~~~~~~~~~~~~  396 (397)
                      ....+.....+ +.|-..     .+...+-+.++++.++..|++
T Consensus       435 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  478 (478)
T 4dqv_A          435 PTDRFRAAVRAAKVGSDKDNPDIPHVSAPTIINYVTNLQLLGLL  478 (478)
T ss_dssp             CCHHHHHHHHHTTCSSCSSSCCCCCCCHHHHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHHHhccCCCcCcccCCCCCHHHHHHHHHHHHhhcCC
Confidence            01112222222 247653     456889999999999999875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.96  E-value=1.4e-27  Score=217.93  Aligned_cols=225  Identities=16%  Similarity=0.096  Sum_probs=163.0

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEEec
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYVT  105 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~~~  105 (397)
                      +|||||||||||++++++|++      |++|++++|++...    ++   +.+|++|++++.+++++  +|.|+|+|+..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~------g~~V~~~~r~~~~~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~   68 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE------RHEVIKVYNSSEIQ----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMT   68 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT------TSCEEEEESSSCCT----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCChhHHHHHHHHhc------CCeEEEecCCCcCC----CC---ceeccCCHHHHHHHHHhcCCCEEEECCccc
Confidence            799999999999999999985      58999999986432    23   88999999999998887  88899997643


Q ss_pred             ccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHH
Q 015961          106 WTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE  183 (397)
Q Consensus       106 ~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e  183 (397)
                      ...  ..++...+++|+.++.+++++|++.+  . +++++||..+|...          ..+++|+.+..|.  ..|+..
T Consensus        69 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~iv~~SS~~~~~~~----------~~~~~e~~~~~~~--~~Y~~s  133 (273)
T 2ggs_A           69 DVDKCEIEKEKAYKINAEAVRHIVRAGKVID--S-YIVHISTDYVFDGE----------KGNYKEEDIPNPI--NYYGLS  133 (273)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--C-EEEEEEEGGGSCSS----------SCSBCTTSCCCCS--SHHHHH
T ss_pred             ChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC--C-eEEEEecceeEcCC----------CCCcCCCCCCCCC--CHHHHH
Confidence            221  12567788999999999999998754  4 78888876655321          2367787775543  348888


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 015961          184 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA  263 (397)
Q Consensus       184 ~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~  263 (397)
                      |...+.+.+.  ++++++||+.|||  +..   +...+..  .+.  .+.++...++   .   .+..+++++|.+++.+
T Consensus       134 K~~~e~~~~~--~~~~~iR~~~v~G--~~~---~~~~~~~--~~~--~~~~~~~~~~---~---~~~~~~~dva~~i~~~  196 (273)
T 2ggs_A          134 KLLGETFALQ--DDSLIIRTSGIFR--NKG---FPIYVYK--TLK--EGKTVFAFKG---Y---YSPISARKLASAILEL  196 (273)
T ss_dssp             HHHHHHHHCC--TTCEEEEECCCBS--SSS---HHHHHHH--HHH--TTCCEEEESC---E---ECCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHhC--CCeEEEecccccc--ccH---HHHHHHH--HHH--cCCCEEeecC---C---CCceEHHHHHHHHHHH
Confidence            8877766444  8899999999998  322   2111111  111  2444444443   2   3444556668887777


Q ss_pred             hcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961          264 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       264 ~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~  300 (397)
                      +..+.  +++||+++ +.+|++|+++.+.+.+|.+..
T Consensus       197 ~~~~~--~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~  230 (273)
T 2ggs_A          197 LELRK--TGIIHVAG-ERISRFELALKIKEKFNLPGE  230 (273)
T ss_dssp             HHHTC--CEEEECCC-CCEEHHHHHHHHHHHTTCCSC
T ss_pred             HhcCc--CCeEEECC-CcccHHHHHHHHHHHhCCChh
Confidence            76532  55899999 999999999999999998743

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.95  E-value=3e-28  Score=224.11  Aligned_cols=282  Identities=13%  Similarity=0.080  Sum_probs=185.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~  103 (397)
                      |+|||||||||||++|+++|++     +  |++|++++|++.... ....+++++.+|++|++++.++++++|.|+|+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLK-----KVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTT-----TSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHH-----hCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            4799999999999999999998     6  999999999764321 0124788999999999999999999999999976


Q ss_pred             ecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHH
Q 015961          104 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE  183 (397)
Q Consensus       104 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e  183 (397)
                      ..   ..     .++|+.++.+++++|++.+  +++++++||..+|       .      .         +   ..|+..
T Consensus        76 ~~---~~-----~~~n~~~~~~l~~a~~~~~--~~~~v~~Ss~~~~-------~------~---------~---~~y~~~  120 (287)
T 2jl1_A           76 PH---YD-----NTLLIVQHANVVKAARDAG--VKHIAYTGYAFAE-------E------S---------I---IPLAHV  120 (287)
T ss_dssp             CC---SC-----HHHHHHHHHHHHHHHHHTT--CSEEEEEEETTGG-------G------C---------C---STHHHH
T ss_pred             CC---cC-----chHHHHHHHHHHHHHHHcC--CCEEEEECCCCCC-------C------C---------C---CchHHH
Confidence            31   11     1679999999999998854  7789888754322       1      0         1   127766


Q ss_pred             HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 015961          184 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA  263 (397)
Q Consensus       184 ~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~  263 (397)
                      |...+.+.+..+++++++||+.++|+..   ..+....     +..  +.. ..+ .+.....   ..+++++|++++.+
T Consensus       121 K~~~E~~~~~~~~~~~ilrp~~~~~~~~---~~~~~~~-----~~~--~~~-~~~-~~~~~~~---~i~~~Dva~~~~~~  185 (287)
T 2jl1_A          121 HLATEYAIRTTNIPYTFLRNALYTDFFV---NEGLRAS-----TES--GAI-VTN-AGSGIVN---SVTRNELALAAATV  185 (287)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCBHHHHS---SGGGHHH-----HHH--TEE-EES-CTTCCBC---CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCeEEEECCEeccccc---hhhHHHH-----hhC--Cce-ecc-CCCCccC---ccCHHHHHHHHHHH
Confidence            6666554456799999999998888321   1111111     111  222 222 2333334   44555668888887


Q ss_pred             hcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccc
Q 015961          264 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL  343 (397)
Q Consensus       264 ~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (397)
                      +.++...+++||+++++.+|++|+++.+.+.+|.+...            .+.+...+...        ....++.....
T Consensus       186 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~------------~~~~~~~~~~~--------~~~~~~~~~~~  245 (287)
T 2jl1_A          186 LTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVH------------QPVSFEEEKNF--------LVNAGVPEPFT  245 (287)
T ss_dssp             HTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEE------------EECCHHHHHHH--------HHHTTCCHHHH
T ss_pred             hcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceE------------EeCCHHHHHHH--------HHhCCCCHHHH
Confidence            76655678899999999999999999999999986432            22333222110        01111111000


Q ss_pred             cccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHH
Q 015961          344 DEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWID  388 (397)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~  388 (397)
                      ....  .+... +......+|++|+++ +|  |.++++|+++++++
T Consensus       246 ~~~~--~~~~~-~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          246 EITA--AIYDA-ISKGEASKTSDDLQKLIG--SLTPLKETVKQALK  286 (287)
T ss_dssp             HHHH--HHHHH-HHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred             HHHH--HHHHH-HhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence            0000  00000 011134578999987 69  89999999999875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.95  E-value=1.1e-27  Score=212.68  Aligned_cols=219  Identities=13%  Similarity=0.073  Sum_probs=153.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      +++|||||||||||++|+++|++     +|++|++++|++........+++++.+|++|.+++.++++++|.|+|+|+..
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   78 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALN-----RGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG   78 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHT-----TTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred             CCEEEEEcCCchHHHHHHHHHHH-----CCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence            36899999999999999999999     8999999999865432222689999999999999999999999999987532


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  185 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~  185 (397)
                         ..+ .+.+++|+.++.+++++|++.+  +++++++||..+|...          .....|+.+..|.  ..|+..|.
T Consensus        79 ---~~~-~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~----------~~~~~~~~~~~p~--~~Y~~sK~  140 (227)
T 3dhn_A           79 ---WNN-PDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSLFIA----------PGLRLMDSGEVPE--NILPGVKA  140 (227)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTSEEE----------TTEEGGGTTCSCG--GGHHHHHH
T ss_pred             ---CCC-hhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhccCC----------CCCccccCCcchH--HHHHHHHH
Confidence               222 2367899999999999999864  7799999876655321          1122344444443  34776554


Q ss_pred             HHH----HHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 015961          186 LFE----EVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI  261 (397)
Q Consensus       186 l~~----~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~  261 (397)
                      ..+    .+.++.+++++++||+.|||+....  ...         ......+ ...+++   ..+++   ++++|++++
T Consensus       141 ~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~---------~~~~~~~-~~~~~~---~~~i~---~~Dva~ai~  202 (227)
T 3dhn_A          141 LGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT--GRY---------RLGKDDM-IVDIVG---NSHIS---VEDYAAAMI  202 (227)
T ss_dssp             HHHHHHHTGGGCCSSEEEEEECCSEEESCCCC--CCC---------EEESSBC-CCCTTS---CCEEE---HHHHHHHHH
T ss_pred             HHHHHHHHHhhccCccEEEEeCCcccCCCccc--cce---------eecCCCc-ccCCCC---CcEEe---HHHHHHHHH
Confidence            444    2224778999999999999954321  110         0111112 223333   34444   455588888


Q ss_pred             HHhcCCCCCCCceeccCCCeeehH
Q 015961          262 WAAVDPYAKNEAFNCNNGDVFKWK  285 (397)
Q Consensus       262 ~~~~~~~~~g~~yni~~~~~~s~~  285 (397)
                      .++.++...|++||++++++.+|.
T Consensus       203 ~~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          203 DELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             HHHHSCCCCSEEEEEECCSCCC--
T ss_pred             HHHhCccccCcEEEEEeehhcccC
Confidence            889888889999999999998875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.95  E-value=2.5e-27  Score=217.77  Aligned_cols=282  Identities=13%  Similarity=0.063  Sum_probs=178.0

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEe
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  104 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~  104 (397)
                      +|||||||||||++|+++|++     +  |++|++++|++.... ....+++++.+|++|++++.++++++|.|+|+|+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMK-----TVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTT-----TSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHh-----hCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            589999999999999999998     6  999999999765421 01246889999999999999999999999999763


Q ss_pred             cccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHH
Q 015961          105 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED  184 (397)
Q Consensus       105 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~  184 (397)
                      .          .+.|+.++++++++|++.+  +++++++||..+|       .            .   +   ..|+..|
T Consensus        76 ~----------~~~~~~~~~~l~~a~~~~~--~~~~v~~Ss~~~~-------~------------~---~---~~y~~sK  118 (286)
T 2zcu_A           76 E----------VGQRAPQHRNVINAAKAAG--VKFIAYTSLLHAD-------T------------S---P---LGLADEH  118 (286)
T ss_dssp             ----------------CHHHHHHHHHHHHT--CCEEEEEEETTTT-------T------------C---C---STTHHHH
T ss_pred             C----------chHHHHHHHHHHHHHHHcC--CCEEEEECCCCCC-------C------------C---c---chhHHHH
Confidence            1          1258899999999998864  7888888753322       0            0   1   1266655


Q ss_pred             HHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 015961          185 ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  264 (397)
Q Consensus       185 ~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~  264 (397)
                      ...+...++.+++++++||+.++++.    ..+....      .+ .+ ++.+ +.+.+...+   .+++++|++++.++
T Consensus       119 ~~~e~~~~~~~~~~~ilrp~~~~~~~----~~~~~~~------~~-~~-~~~~-~~~~~~~~~---i~~~Dva~~~~~~~  182 (286)
T 2zcu_A          119 IETEKMLADSGIVYTLLRNGWYSENY----LASAPAA------LE-HG-VFIG-AAGDGKIAS---ATRADYAAAAARVI  182 (286)
T ss_dssp             HHHHHHHHHHCSEEEEEEECCBHHHH----HTTHHHH------HH-HT-EEEE-SCTTCCBCC---BCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCeEEEeChHHhhhh----HHHhHHh------hc-CC-ceec-cCCCCcccc---ccHHHHHHHHHHHh
Confidence            55544434568999999998766521    1111111      11 12 2232 233333344   45555688888877


Q ss_pred             cCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCccccc
Q 015961          265 VDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLD  344 (397)
Q Consensus       265 ~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (397)
                      .++...+++||+++++.+|++|+++.+.+.+|.+...            .+.+...+...        ....++......
T Consensus       183 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~------------~~~~~~~~~~~--------~~~~~~~~~~~~  242 (286)
T 2zcu_A          183 SEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTY------------QNLSEADFAAA--------LKSVGLPDGLAD  242 (286)
T ss_dssp             HSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEE------------EECCHHHHHHH--------HTTSSCCHHHHH
T ss_pred             cCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCce------------eeCCHHHHHHH--------HHHcCCCHHHHH
Confidence            7655678899999998999999999999999986432            22333222110        000011000000


Q ss_pred             ccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHh
Q 015961          345 EVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  391 (397)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~  391 (397)
                      ...  ..... +......+|.+|+++ +|| |.++++|+++++++||.
T Consensus       243 ~~~--~~~~~-~~~~~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          243 MLA--DSDVG-ASKGGLFDDSKTLSKLIGH-PTTTLAESVSHLFNVNN  286 (286)
T ss_dssp             HHH--HHHHH-HHTTTTCCCCCHHHHHHTS-CCCCHHHHHHGGGC---
T ss_pred             HHH--HHHHH-HhCCCCccCchHHHHHhCc-CCCCHHHHHHHHHhhcC
Confidence            000  00000 111134568999987 697 68899999999998863

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.94  E-value=2.7e-27  Score=223.76  Aligned_cols=227  Identities=13%  Similarity=0.078  Sum_probs=163.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc--cC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--QL   95 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~--~~   95 (397)
                      +++|||||||||||++|+++|++     .|++|++++|++....        ....+++++.+|+.|.+++.++++  ++
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~-----~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~   84 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLD-----AHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI   84 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHH-----TTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHH-----CCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence            36899999999999999999998     7899999999763210        012578999999999999999999  99


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      |.|+|+++.             .|+.++.+++++|++.+ .+++|++ |          .||.      +.+|+.+..|.
T Consensus        85 d~Vi~~a~~-------------~n~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~------~~~e~~~~~p~  133 (346)
T 3i6i_A           85 DIVVSTVGG-------------ESILDQIALVKAMKAVG-TIKRFLP-S----------EFGH------DVNRADPVEPG  133 (346)
T ss_dssp             CEEEECCCG-------------GGGGGHHHHHHHHHHHC-CCSEEEC-S----------CCSS------CTTTCCCCTTH
T ss_pred             CEEEECCch-------------hhHHHHHHHHHHHHHcC-CceEEee-c----------ccCC------CCCccCcCCCc
Confidence            999999653             38889999999999864 3777773 2          3442      23444444332


Q ss_pred             CCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 015961          176 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  255 (397)
Q Consensus       176 ~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  255 (397)
                        ..|...|...+.+.++.|++++++||+.++|........   ..     ........+.++|++.....++++   ++
T Consensus       134 --~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~---~~-----~~~~~~~~~~~~g~g~~~~~~i~~---~D  200 (346)
T 3i6i_A          134 --LNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH---PS-----EVLPPTDFFQIYGDGNVKAYFVAG---TD  200 (346)
T ss_dssp             --HHHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCSCC-------------CCCCSSCEEEETTSCCCEEEECH---HH
T ss_pred             --chHHHHHHHHHHHHHHcCCCEEEEEecccccccCccccc---cc-----cccCCCceEEEccCCCceEEecCH---HH
Confidence              236665555554446689999999999999943211111   11     001123345667777766555555   55


Q ss_pred             HHHHHHHHhcCCCCCCCceeccC-CCeeehHHHHHHHHHHhCCCCCC
Q 015961          256 IAEHQIWAAVDPYAKNEAFNCNN-GDVFKWKHLWKVLAEQFGIEDYG  301 (397)
Q Consensus       256 la~~~~~~~~~~~~~g~~yni~~-~~~~s~~el~~~i~~~~g~~~~~  301 (397)
                      +|++++.++..+...+++||+++ ++.+|+.|+++.+++.+|.+...
T Consensus       201 va~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~  247 (346)
T 3i6i_A          201 IGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPR  247 (346)
T ss_dssp             HHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCE
T ss_pred             HHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCce
Confidence            58888888877666688999985 47899999999999999987543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.94  E-value=1.4e-26  Score=210.87  Aligned_cols=208  Identities=16%  Similarity=0.098  Sum_probs=149.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  104 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~  104 (397)
                      |+|+|||||||||||++|+++|++     .|++|++++|++....  ..+++++.+|++|++++.++++++|.|+|+|+.
T Consensus         1 M~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            1 MLNRLLVTGAAGGVGSAIRPHLGT-----LAHEVRLSDIVDLGAA--EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHGGGGGG-----TEEEEEECCSSCCCCC--CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CCceEEEECCCCHHHHHHHHHHHh-----CCCEEEEEeCCCcccc--CCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence            457899999999999999999998     7999999999865432  246889999999999999999999999999764


Q ss_pred             cccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH--
Q 015961          105 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--  182 (397)
Q Consensus       105 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~--  182 (397)
                      .  ...+....+++|+.++.++++++++.+  +++|+++||..+|+..        +...+++|++|..|...  |+.  
T Consensus        74 ~--~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~~~~~--------~~~~~~~E~~~~~~~~~--Y~~sK  139 (267)
T 3ay3_A           74 S--VERPWNDILQANIIGAYNLYEAARNLG--KPRIVFASSNHTIGYY--------PRTTRIDTEVPRRPDSL--YGLSK  139 (267)
T ss_dssp             C--SCCCHHHHHHHTHHHHHHHHHHHHHTT--CCEEEEEEEGGGSTTS--------BTTSCBCTTSCCCCCSH--HHHHH
T ss_pred             C--CCCCHHHHHHHHHHHHHHHHHHHHHhC--CCEEEEeCCHHHhCCC--------CCCCCCCCCCCCCCCCh--HHHHH
Confidence            3  334567788999999999999998753  7789988876655421        11457788887665433  654  


Q ss_pred             ---HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961          183 ---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  259 (397)
Q Consensus       183 ---e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  259 (397)
                         |+++..+. +..+++++++||+.+|+. +..                           +.....+   .+++++|++
T Consensus       140 ~~~e~~~~~~~-~~~gi~~~~lrp~~v~~~-~~~---------------------------~~~~~~~---~~~~dva~~  187 (267)
T 3ay3_A          140 CFGEDLASLYY-HKFDIETLNIRIGSCFPK-PKD---------------------------ARMMATW---LSVDDFMRL  187 (267)
T ss_dssp             HHHHHHHHHHH-HTTCCCEEEEEECBCSSS-CCS---------------------------HHHHHHB---CCHHHHHHH
T ss_pred             HHHHHHHHHHH-HHcCCCEEEEeceeecCC-CCC---------------------------CCeeecc---ccHHHHHHH
Confidence               45554443 567899999999999952 110                           0001122   344556777


Q ss_pred             HHHHhcCCCCCCCceeccCCCeeehH
Q 015961          260 QIWAAVDPYAKNEAFNCNNGDVFKWK  285 (397)
Q Consensus       260 ~~~~~~~~~~~g~~yni~~~~~~s~~  285 (397)
                      ++.++..+...+++||+.++...++.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (267)
T 3ay3_A          188 MKRAFVAPKLGCTVVYGASANTESWW  213 (267)
T ss_dssp             HHHHHHSSCCCEEEEEECCSCSSCCB
T ss_pred             HHHHHhCCCCCceeEecCCCcccccc
Confidence            77777665444567777654433333

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=6.1e-26  Score=200.32  Aligned_cols=208  Identities=16%  Similarity=0.129  Sum_probs=151.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCC-HHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD-PEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |+|||||||||||++++++|++     +|++|++++|++.... ...+++++.+|++| .+++.++++++|.|+|+|+..
T Consensus         1 M~ilItGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLST-----TDYQIYAGARKVEQVP-QYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG   74 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTT-----SSCEEEEEESSGGGSC-CCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred             CeEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCccchh-hcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence            3799999999999999999999     8999999999865432 12689999999999 999999999999999997643


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  185 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~  185 (397)
                      .      .+.+++|+.++.+++++|++.+  +++++++||...|.            ..+..| .+..  +...|+..|.
T Consensus        75 ~------~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~~~------------~~~~~e-~~~~--~~~~Y~~sK~  131 (219)
T 3dqp_A           75 G------KSLLKVDLYGAVKLMQAAEKAE--VKRFILLSTIFSLQ------------PEKWIG-AGFD--ALKDYYIAKH  131 (219)
T ss_dssp             T------SSCCCCCCHHHHHHHHHHHHTT--CCEEEEECCTTTTC------------GGGCCS-HHHH--HTHHHHHHHH
T ss_pred             C------CCcEeEeHHHHHHHHHHHHHhC--CCEEEEECcccccC------------CCcccc-cccc--cccHHHHHHH
Confidence            2      2256899999999999998764  77899888643332            122333 2211  2334777666


Q ss_pred             HHHHHh-cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 015961          186 LFEEVE-KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  264 (397)
Q Consensus       186 l~~~~~-~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~  264 (397)
                      ..+... +..+++++++||+.+||+.....                    +.+ +  .....+++   ++++|++++.++
T Consensus       132 ~~e~~~~~~~~i~~~ilrp~~v~g~~~~~~--------------------~~~-~--~~~~~~i~---~~Dva~~i~~~l  185 (219)
T 3dqp_A          132 FADLYLTKETNLDYTIIQPGALTEEEATGL--------------------IDI-N--DEVSASNT---IGDVADTIKELV  185 (219)
T ss_dssp             HHHHHHHHSCCCEEEEEEECSEECSCCCSE--------------------EEE-S--SSCCCCEE---HHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCcEEEEeCceEecCCCCCc--------------------ccc-C--CCcCCccc---HHHHHHHHHHHH
Confidence            666554 67899999999999999421110                    011 1  22234444   455588888888


Q ss_pred             cCCCCCCCceeccCCCeeehHHHHHH
Q 015961          265 VDPYAKNEAFNCNNGDVFKWKHLWKV  290 (397)
Q Consensus       265 ~~~~~~g~~yni~~~~~~s~~el~~~  290 (397)
                      .++...+++||++++. .+++|+++.
T Consensus       186 ~~~~~~g~~~~i~~g~-~~~~e~~~~  210 (219)
T 3dqp_A          186 MTDHSIGKVISMHNGK-TAIKEALES  210 (219)
T ss_dssp             TCGGGTTEEEEEEECS-EEHHHHHHT
T ss_pred             hCccccCcEEEeCCCC-ccHHHHHHH
Confidence            7766678999998764 999987653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.92  E-value=2.8e-24  Score=197.77  Aligned_cols=219  Identities=14%  Similarity=0.052  Sum_probs=153.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  104 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~  104 (397)
                      ++|||||||||||++++++|++     . |++|++++|++.... ....+++++.+|++|++++.++++++|.|+|+++.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~-----~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIA-----NHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHH-----TTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhh-----CCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            3699999999999999999987     5 899999999865421 12368999999999999999999999999998653


Q ss_pred             cccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHH
Q 015961          105 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED  184 (397)
Q Consensus       105 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~  184 (397)
                      ..   .     ...|+.++++++++|++.+  +++++++||          +|.        .+..|. +...    ...
T Consensus        76 ~~---~-----~~~~~~~~~~l~~aa~~~g--v~~iv~~Ss----------~~~--------~~~~~~-~~~~----~~~  122 (289)
T 3e48_A           76 IH---P-----SFKRIPEVENLVYAAKQSG--VAHIIFIGY----------YAD--------QHNNPF-HMSP----YFG  122 (289)
T ss_dssp             CC---S-----HHHHHHHHHHHHHHHHHTT--CCEEEEEEE----------SCC--------STTCCS-TTHH----HHH
T ss_pred             Cc---c-----chhhHHHHHHHHHHHHHcC--CCEEEEEcc----------cCC--------CCCCCC-ccch----hHH
Confidence            21   1     2358999999999999864  788998874          221        011111 1001    111


Q ss_pred             HHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 015961          185 ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  264 (397)
Q Consensus       185 ~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~  264 (397)
                      .+.+.. +..|++++++||+.++|+    ...+   +.   .+.+. +.  ...+.+.....+   .+++++|++++.++
T Consensus       123 ~~e~~~-~~~g~~~~ilrp~~~~~~----~~~~---~~---~~~~~-~~--~~~~~g~~~~~~---i~~~Dva~~~~~~l  185 (289)
T 3e48_A          123 YASRLL-STSGIDYTYVRMAMYMDP----LKPY---LP---ELMNM-HK--LIYPAGDGRINY---ITRNDIARGVIAII  185 (289)
T ss_dssp             HHHHHH-HHHCCEEEEEEECEESTT----HHHH---HH---HHHHH-TE--ECCCCTTCEEEE---ECHHHHHHHHHHHH
T ss_pred             HHHHHH-HHcCCCEEEEeccccccc----cHHH---HH---HHHHC-CC--EecCCCCceeee---EEHHHHHHHHHHHH
Confidence            223333 456899999999999993    1111   11   11111 21  112233433444   45555688888888


Q ss_pred             cCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCC
Q 015961          265 VDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG  301 (397)
Q Consensus       265 ~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~  301 (397)
                      ..+...+++||++ ++.+|+.|+++.+.+.+|.+...
T Consensus       186 ~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~  221 (289)
T 3e48_A          186 KNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEIKY  221 (289)
T ss_dssp             HCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEE
T ss_pred             cCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCceeE
Confidence            7766668999999 99999999999999999987543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.92  E-value=1.9e-25  Score=199.44  Aligned_cols=219  Identities=11%  Similarity=0.061  Sum_probs=153.4

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCc-eEEEccCCCHHHHHHHHccCCC
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLV-EYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v-~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ...+.++|+|||||||||||++|+++|++     +|++|++++|++.... ....++ +++.+|++  +++.+++.++|.
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~   87 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKN-----KGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDA   87 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSE
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHh-----CCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCE
Confidence            33455678999999999999999999999     8999999999864321 012378 99999999  667788889999


Q ss_pred             eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  177 (397)
Q Consensus        98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~  177 (397)
                      |+|+|+..  ...++...+++|+.++.+++++|++.+  +++|+++||...+       .         .+..+   .+.
T Consensus        88 vi~~ag~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~~-------~---------~~~~~---~~~  144 (236)
T 3e8x_A           88 VVFAAGSG--PHTGADKTILIDLWGAIKTIQEAEKRG--IKRFIMVSSVGTV-------D---------PDQGP---MNM  144 (236)
T ss_dssp             EEECCCCC--TTSCHHHHHHTTTHHHHHHHHHHHHHT--CCEEEEECCTTCS-------C---------GGGSC---GGG
T ss_pred             EEECCCCC--CCCCccccchhhHHHHHHHHHHHHHcC--CCEEEEEecCCCC-------C---------CCCCh---hhh
Confidence            99997642  235678889999999999999998764  7889988852111       0         01111   123


Q ss_pred             cchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHH
Q 015961          178 FYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIA  257 (397)
Q Consensus       178 ~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la  257 (397)
                      ..|+..|...+.+.+..+++++++||+.++|+......                    ...........+++   .+++|
T Consensus       145 ~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~~~~--------------------~~~~~~~~~~~~i~---~~Dva  201 (236)
T 3e8x_A          145 RHYLVAKRLADDELKRSSLDYTIVRPGPLSNEESTGKV--------------------TVSPHFSEITRSIT---RHDVA  201 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSSSEEEEEEECSEECSCCCSEE--------------------EEESSCSCCCCCEE---HHHHH
T ss_pred             hhHHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCCCeE--------------------EeccCCCcccCcEe---HHHHH
Confidence            34777666666544678999999999999994221110                    11111222223444   45568


Q ss_pred             HHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHH
Q 015961          258 EHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLA  292 (397)
Q Consensus       258 ~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~  292 (397)
                      ++++.++.++...|++||++++ .++++|+++.++
T Consensus       202 ~~~~~~~~~~~~~g~~~~v~~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          202 KVIAELVDQQHTIGKTFEVLNG-DTPIAKVVEQLG  235 (236)
T ss_dssp             HHHHHHTTCGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred             HHHHHHhcCccccCCeEEEeCC-CcCHHHHHHHhc
Confidence            8888888776677899999987 599999988765

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.91  E-value=4.3e-25  Score=198.82  Aligned_cols=230  Identities=13%  Similarity=0.069  Sum_probs=158.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      ++++|||||||||||++|+++|++     .  |++|++++|++........+++++.+|++|.+++.++++++|.|+|+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   77 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKE-----GSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILT   77 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHH-----TTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHh-----cCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEec
Confidence            457999999999999999999998     6  899999999753210012468899999999999999999999999998


Q ss_pred             EecccC-----------CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961          103 YVTWTN-----------RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus       103 ~~~~~~-----------~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      +.....           ..    .....+++|+.++.++++++++.+  +++++++||...+                 .
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~-----------------~  138 (253)
T 1xq6_A           78 SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMGGT-----------------N  138 (253)
T ss_dssp             CCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETTTT-----------------C
T ss_pred             cccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC--CCEEEEEcCccCC-----------------C
Confidence            743210           00    112467899999999999998764  6788888754322                 1


Q ss_pred             CCCCCCCCCCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961          168 EDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  247 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  247 (397)
                      +..|..+.....|...|...+.+.+..+++++++||+.+||+.... ....          .....+  +.+..   ..+
T Consensus       139 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~-~~~~----------~~~~~~--~~~~~---~~~  202 (253)
T 1xq6_A          139 PDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV-RELL----------VGKDDE--LLQTD---TKT  202 (253)
T ss_dssp             TTCGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSS-SCEE----------EESTTG--GGGSS---CCE
T ss_pred             CCCccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcch-hhhh----------ccCCcC--CcCCC---CcE
Confidence            1111111111226666666555546789999999999999953221 1100          001111  11111   123


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCC---eeehHHHHHHHHHHhCC
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD---VFKWKHLWKVLAEQFGI  297 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~---~~s~~el~~~i~~~~g~  297 (397)
                      +   +++++|+++++++.++...+++||+++++   .+|++|+++.+++.+|+
T Consensus       203 ~---~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          203 V---PRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             E---EHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             E---cHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            3   44556888888876655568899999864   59999999999998875

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.91  E-value=2.5e-24  Score=195.85  Aligned_cols=218  Identities=13%  Similarity=0.047  Sum_probs=159.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      +|+||||||||+||++|+++|++     +|++|++++|++....  ..+++++.+|++|.+++.++++++|.|+|+|+. 
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~-----~G~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~-   74 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAP-----MAEILRLADLSPLDPA--GPNEECVQCDLADANAVNAMVAGCDGIVHLGGI-   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGG-----GEEEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHh-----cCCEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC-
Confidence            36899999999999999999998     8999999999875532  367899999999999999999999999999764 


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHH--
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE--  183 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e--  183 (397)
                       ....+.+..+++|+.|+.+++++|++.+  +.+|+++||..+|+..        +...+++|+.|..+..  .|+..  
T Consensus        75 -~~~~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iv~~SS~~~~g~~--------~~~~~~~e~~~~~~~~--~Y~~sK~  141 (267)
T 3rft_A           75 -SVEKPFEQILQGNIIGLYNLYEAARAHG--QPRIVFASSNHTIGYY--------PQTERLGPDVPARPDG--LYGVSKC  141 (267)
T ss_dssp             -CSCCCHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGTTS--------BTTSCBCTTSCCCCCS--HHHHHHH
T ss_pred             -cCcCCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcchHHhCCC--------CCCCCCCCCCCCCCCC--hHHHHHH
Confidence             2344678889999999999999998753  6789988876666421        1245678887765543  37654  


Q ss_pred             ---HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 015961          184 ---DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  260 (397)
Q Consensus       184 ---~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  260 (397)
                         .++..+. ++.+++++++||+.|+|+. ..                           ......+++   .++++..+
T Consensus       142 ~~e~~~~~~a-~~~g~~~~~vr~~~v~~~~-~~---------------------------~~~~~~~~~---~~d~a~~~  189 (267)
T 3rft_A          142 FGENLARMYF-DKFGQETALVRIGSCTPEP-NN---------------------------YRMLSTWFS---HDDFVSLI  189 (267)
T ss_dssp             HHHHHHHHHH-HHHCCCEEEEEECBCSSSC-CS---------------------------TTHHHHBCC---HHHHHHHH
T ss_pred             HHHHHHHHHH-HHhCCeEEEEEeecccCCC-CC---------------------------CCceeeEEc---HHHHHHHH
Confidence               4444433 4678999999999999831 11                           111112233   33446666


Q ss_pred             HHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCC
Q 015961          261 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  298 (397)
Q Consensus       261 ~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~  298 (397)
                      ..++..+...+.++++++++..++.++...  +.+|.+
T Consensus       190 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          190 EAVFRAPVLGCPVVWGASANDAGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             HHHHHCSCCCSCEEEECCCCTTCCBCCGGG--GGGCCC
T ss_pred             HHHHhCCCCCceEEEEeCCCCCCcccChhH--HHCCCC
Confidence            666666666667888888887777766433  556654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.91  E-value=1.5e-24  Score=204.54  Aligned_cols=227  Identities=17%  Similarity=0.109  Sum_probs=159.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCC-Cc-EEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PW-KVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~-~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      .+|+|||||||||||++|+++|++     . |+ +|++++|++...     .....+++++.+|++|.+++.++++++|.
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~-----~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~   94 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLD-----TTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDI   94 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----HCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-----hCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCE
Confidence            358999999999999999999998     7 87 999999975321     00125789999999999999999999999


Q ss_pred             eeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        98 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      |+|+|+.....  ..++.+.+++|+.|+.+++++|.+.+  +++++++||...+       .                |.
T Consensus        95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS~~~~-------~----------------p~  149 (344)
T 2gn4_A           95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALSTDKAA-------N----------------PI  149 (344)
T ss_dssp             EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGS-------S----------------CC
T ss_pred             EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecCCccC-------C----------------Cc
Confidence            99998754321  12567889999999999999999864  7889988753221       0                11


Q ss_pred             CCcchhH-----HHHHHHHHhc---CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC-CceecCCccccce
Q 015961          176 PNFYYTL-----EDILFEEVEK---KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWEC  246 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~~~---~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~  246 (397)
                        ..|+.     |+++..+. +   ..+++++++||++|||+  +.  +....+   ....+ .+. ++.+. ++...+.
T Consensus       150 --~~Y~~sK~~~E~~~~~~~-~~~~~~g~~~~~vRpg~v~g~--~~--~~i~~~---~~~~~-~g~~~~~i~-~~~~~r~  217 (344)
T 2gn4_A          150 --NLYGATKLCSDKLFVSAN-NFKGSSQTQFSVVRYGNVVGS--RG--SVVPFF---KKLVQ-NKASEIPIT-DIRMTRF  217 (344)
T ss_dssp             --SHHHHHHHHHHHHHHHGG-GCCCSSCCEEEEECCCEETTC--TT--SHHHHH---HHHHH-HTCCCEEES-CTTCEEE
T ss_pred             --cHHHHHHHHHHHHHHHHH-HHhCCCCcEEEEEEeccEECC--CC--CHHHHH---HHHHH-cCCCceEEe-CCCeEEe
Confidence              22665     44444332 2   25799999999999994  32  111111   11111 244 55544 3444455


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCC
Q 015961          247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  298 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~  298 (397)
                      ++++.|   +|.+++.++... ..|++||++++ .+|+.|+++.+++.++.+
T Consensus       218 ~i~v~D---~a~~v~~~l~~~-~~g~~~~~~~~-~~s~~el~~~i~~~~~~~  264 (344)
T 2gn4_A          218 WITLDE---GVSFVLKSLKRM-HGGEIFVPKIP-SMKMTDLAKALAPNTPTK  264 (344)
T ss_dssp             EECHHH---HHHHHHHHHHHC-CSSCEEEECCC-EEEHHHHHHHHCTTCCEE
T ss_pred             eEEHHH---HHHHHHHHHhhc-cCCCEEecCCC-cEEHHHHHHHHHHhCCee
Confidence            555555   477777766543 46789998765 699999999998766543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.91  E-value=1.9e-24  Score=190.65  Aligned_cols=216  Identities=15%  Similarity=0.127  Sum_probs=129.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  106 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~  106 (397)
                      |+|||||||||||++|+++|++     +|++|++++|++.......++++++.+|++|.++  +++.++|.|+|+|+...
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~   73 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKN-----RGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQNVVVDAYGISP   73 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTCSEEEECCCSST
T ss_pred             CeEEEEcCCchhHHHHHHHHHh-----CCCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCCCEEEECCcCCc
Confidence            4799999999999999999998     8999999999864321001578999999999987  78899999999976421


Q ss_pred             cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHH
Q 015961          107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  186 (397)
Q Consensus       107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l  186 (397)
                         .    ..+.|+.++++++++|++.+  +.+++++||...|.      +.  +...+..|+.+..|...  |+..|..
T Consensus        74 ---~----~~~~~~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~------~~--~~~~~~~~~~~~~~~~~--y~~~k~~  134 (221)
T 3ew7_A           74 ---D----EAEKHVTSLDHLISVLNGTV--SPRLLVVGGAASLQ------ID--EDGNTLLESKGLREAPY--YPTARAQ  134 (221)
T ss_dssp             ---T----TTTSHHHHHHHHHHHHCSCC--SSEEEEECCCC---------------------------CCC--SCCHHHH
T ss_pred             ---c----ccchHHHHHHHHHHHHHhcC--CceEEEEecceEEE------cC--CCCccccccCCCCCHHH--HHHHHHH
Confidence               1    24679999999999999863  67888888654332      21  01224455555444433  4322222


Q ss_pred             H---HHHhc-CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961          187 F---EEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  262 (397)
Q Consensus       187 ~---~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~  262 (397)
                      .   +...+ ..+++++++||+.+||+.+.  ..   .+      .. .+.++.+.+.+.+      ..+.+++|++++.
T Consensus       135 ~e~~~~~~~~~~gi~~~ivrp~~v~g~~~~--~~---~~------~~-~~~~~~~~~~~~~------~i~~~Dva~~~~~  196 (221)
T 3ew7_A          135 AKQLEHLKSHQAEFSWTYISPSAMFEPGER--TG---DY------QI-GKDHLLFGSDGNS------FISMEDYAIAVLD  196 (221)
T ss_dssp             HHHHHHHHTTTTTSCEEEEECSSCCCCC---------------------------------------CCCHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCccEEEEeCcceecCCCc--cC---ce------Ee-ccccceecCCCCc------eEeHHHHHHHHHH
Confidence            1   12223 68899999999999995221  11   11      00 1222233343332      3344666888888


Q ss_pred             HhcCCCCCCCceeccCCCeeehHH
Q 015961          263 AAVDPYAKNEAFNCNNGDVFKWKH  286 (397)
Q Consensus       263 ~~~~~~~~g~~yni~~~~~~s~~e  286 (397)
                      ++.++...+++||++++...+.+|
T Consensus       197 ~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          197 EIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             HHHSCSCTTSEEECCC--------
T ss_pred             HHhCccccCCEEEECCCCcccccc
Confidence            888888889999999987776554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.91  E-value=1.5e-24  Score=206.63  Aligned_cols=211  Identities=17%  Similarity=0.120  Sum_probs=153.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |+|||||||||||++|+++|++     +|+ +|++++|+                  .|++++.++++++|.|+|+|+..
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~-----~g~~~v~~~d~~------------------~d~~~l~~~~~~~d~Vih~a~~~   57 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTS-----TTDHHIFEVHRQ------------------TKEEELESALLKADFIVHLAGVN   57 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----HCCCEEEECCTT------------------CCHHHHHHHHHHCSEEEECCCSB
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCCEEEEECCC------------------CCHHHHHHHhccCCEEEECCcCC
Confidence            4799999999999999999998     788 78777664                  67888999999999999997643


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc-eEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh---
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR-HVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT---  181 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~-~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~---  181 (397)
                      .  ..++.+.+++|+.++.+++++|++.+  ++ +++++||..+|.                          ...|+   
T Consensus        58 ~--~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~v~~Ss~~~~~--------------------------~~~Y~~sK  107 (369)
T 3st7_A           58 R--PEHDKEFSLGNVSYLDHVLDILTRNT--KKPAILLSSSIQATQ--------------------------DNPYGESK  107 (369)
T ss_dssp             C--TTCSTTCSSSCCBHHHHHHHHHTTCS--SCCEEEEEEEGGGGS--------------------------CSHHHHHH
T ss_pred             C--CCCHHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEeCchhhcC--------------------------CCCchHHH
Confidence            3  23556678899999999999999864  44 888888655442                          01144   


Q ss_pred             --HHHHHHHHHhcCCCeeEEEEcCCceeeccCCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 015961          182 --LEDILFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  258 (397)
Q Consensus       182 --~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  258 (397)
                        .|+++.++. ++.+++++++||+++||+.... ..++...+..  .+.  .+.++.+ +++.+.+.++++   +++|+
T Consensus       108 ~~~E~~~~~~~-~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~--~~~--~~~~~~~-~~~~~~~~~i~v---~Dva~  178 (369)
T 3st7_A          108 LQGEQLLREYA-EEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCY--KIA--RNEEIQV-NDRNVELTLNYV---DDIVA  178 (369)
T ss_dssp             HHHHHHHHHHH-HHHCCCEEEEEECEEECTTCCTTSSCHHHHHHH--HHH--TTCCCCC-SCTTCEEEEEEH---HHHHH
T ss_pred             HHHHHHHHHHH-HHhCCCEEEEECCceeCCCCCCCcchHHHHHHH--HHH--cCCCeEe-cCCCeEEEEEEH---HHHHH
Confidence              366666654 5578999999999999954321 1223322211  112  2444333 344544555555   45588


Q ss_pred             HHHHHhcCCCCC-CCceeccCCCeeehHHHHHHHHHHhCCCC
Q 015961          259 HQIWAAVDPYAK-NEAFNCNNGDVFKWKHLWKVLAEQFGIED  299 (397)
Q Consensus       259 ~~~~~~~~~~~~-g~~yni~~~~~~s~~el~~~i~~~~g~~~  299 (397)
                      +++.++..+... +++||++++..+|+.|+++.+++.+|.+.
T Consensus       179 ~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~  220 (369)
T 3st7_A          179 EIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRL  220 (369)
T ss_dssp             HHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCc
Confidence            888887776554 88999999999999999999999999764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.90  E-value=9.2e-24  Score=195.32  Aligned_cols=228  Identities=15%  Similarity=-0.039  Sum_probs=154.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ++|+||||||||+||++++++|++     .| ++|++++|++....   ....+++++.+|+.|++++.++++++|.|+|
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~-----~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   78 (299)
T 2wm3_A            4 DKKLVVVFGGTGAQGGSVARTLLE-----DGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFI   78 (299)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHH-----HCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHh-----cCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEE
Confidence            457999999999999999999998     67 99999999865420   0124789999999999999999999999999


Q ss_pred             EEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961          101 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  180 (397)
Q Consensus       101 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y  180 (397)
                      +++...      ....+.|+.++++++++|++.+  ++++++.|+..+|..               .+..   +. . .|
T Consensus        79 ~a~~~~------~~~~~~~~~~~~~~~~aa~~~g--v~~iv~~S~~~~~~~---------------~~~~---~~-~-~y  130 (299)
T 2wm3_A           79 VTNYWE------SCSQEQEVKQGKLLADLARRLG--LHYVVYSGLENIKKL---------------TAGR---LA-A-AH  130 (299)
T ss_dssp             CCCHHH------HTCHHHHHHHHHHHHHHHHHHT--CSEEEECCCCCHHHH---------------TTTS---CC-C-HH
T ss_pred             eCCCCc------cccchHHHHHHHHHHHHHHHcC--CCEEEEEcCcccccc---------------CCCc---cc-C-ch
Confidence            864211      1124578899999999998864  788888665433321               0111   11 1 24


Q ss_pred             hHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC--ceecCCccccceeeecccHHHHHH
Q 015961          181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP--LRFPGTKAAWECYSIASDADLIAE  258 (397)
Q Consensus       181 ~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~g~~~~~~~~~~~~da~~la~  258 (397)
                      ...|...+...+..|++++++||+.+||+....   +....       ...+..  +.++ .++....++++.|+   |+
T Consensus       131 ~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~~---~~~~~-------~~~g~~~~~~~~-~~~~~~~~i~~~Dv---a~  196 (299)
T 2wm3_A          131 FDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSH---FLPQK-------APDGKSYLLSLP-TGDVPMDGMSVSDL---GP  196 (299)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEECCEEGGGGGTT---TCCEE-------CTTSSSEEECCC-CTTSCEEEECGGGH---HH
T ss_pred             hhHHHHHHHHHHHCCCCEEEEeecHHhhhchhh---cCCcc-------cCCCCEEEEEec-CCCCccceecHHHH---HH
Confidence            444444333335568999999999999942110   00000       011222  1222 23444566666665   66


Q ss_pred             HHHHHhcCC-CCCCCceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961          259 HQIWAAVDP-YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       259 ~~~~~~~~~-~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~  300 (397)
                      +++.++.++ ...|++||+++ +.+|+.|+++.+.+.+|.+..
T Consensus       197 ~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~  238 (299)
T 2wm3_A          197 VVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVH  238 (299)
T ss_dssp             HHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEE
T ss_pred             HHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCce
Confidence            666666543 23578999986 689999999999999998754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.90  E-value=1.6e-23  Score=194.90  Aligned_cols=233  Identities=14%  Similarity=0.100  Sum_probs=156.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +++|||||||||||++++++|++     .|++|++++|++....         ....+++++.+|+.|++++.++++++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d   78 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASIS-----LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD   78 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHH-----TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHh-----CCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCC
Confidence            36899999999999999999998     7999999999854210         013578999999999999999999999


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  176 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~  176 (397)
                      .|+|+++....         ..|+.++.+++++|++.+ ++++|++ |          .||...  ..+   +.+..|. 
T Consensus        79 ~vi~~a~~~~~---------~~~~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~~--~~~---~~~~~p~-  131 (313)
T 1qyd_A           79 VVISALAGGVL---------SHHILEQLKLVEAIKEAG-NIKRFLP-S----------EFGMDP--DIM---EHALQPG-  131 (313)
T ss_dssp             EEEECCCCSSS---------STTTTTHHHHHHHHHHSC-CCSEEEC-S----------CCSSCT--TSC---CCCCSST-
T ss_pred             EEEECCccccc---------hhhHHHHHHHHHHHHhcC-CCceEEe-c----------CCcCCc--ccc---ccCCCCC-
Confidence            99999653211         237888999999999863 3778873 2          344210  111   2222222 


Q ss_pred             CcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHH
Q 015961          177 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLI  256 (397)
Q Consensus       177 ~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~l  256 (397)
                      ...| ..|...+.+.++.+++++++||+.++|........... .      ....+..+.+++++.....++   +++++
T Consensus       132 ~~~y-~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~g~~~~~~i---~~~Dv  200 (313)
T 1qyd_A          132 SITF-IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDG-H------MMPPRDKVLIYGDGNVKGIWV---DEDDV  200 (313)
T ss_dssp             THHH-HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTC-C------SSCCSSEECCBTTSCSEEEEE---CHHHH
T ss_pred             cchH-HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccc-c------ccCCCCeEEEeCCCCceEEEE---EHHHH
Confidence            2236 55544444336678999999999988842111100000 0      000122234455555444554   45556


Q ss_pred             HHHHHHHhcCCCCCCCceeccCC-CeeehHHHHHHHHHHhCCCCCC
Q 015961          257 AEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYG  301 (397)
Q Consensus       257 a~~~~~~~~~~~~~g~~yni~~~-~~~s~~el~~~i~~~~g~~~~~  301 (397)
                      |++++.++.++...++.|+++++ +.+|+.|+++.+.+.+|.+...
T Consensus       201 a~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  246 (313)
T 1qyd_A          201 GTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDK  246 (313)
T ss_dssp             HHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             HHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCce
Confidence            88888777665556788888764 7899999999999999987543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.89  E-value=7e-24  Score=187.58  Aligned_cols=218  Identities=14%  Similarity=0.114  Sum_probs=142.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |+|||||||||||++|+++|++     +|++|++++|++.... ....+++++.+|++|.++  +++.++|.|+|+|+..
T Consensus         1 MkilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARR-----RGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVP   73 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHH-----CCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccC
Confidence            3799999999999999999999     8999999999854310 122589999999999987  7889999999997754


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  185 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~  185 (397)
                      +..     ...++|+.++++++++|++.+   ++++++||...+.      +.......+..|...  |.+...|+..|.
T Consensus        74 ~~~-----~~~~~n~~~~~~l~~a~~~~~---~~~v~~SS~~~~~------~~~~~~~~~~~~~~~--~~~~~~y~~sK~  137 (224)
T 3h2s_A           74 WGS-----GRGYLHLDFATHLVSLLRNSD---TLAVFILGSASLA------MPGADHPMILDFPES--AASQPWYDGALY  137 (224)
T ss_dssp             TTS-----SCTHHHHHHHHHHHHTCTTCC---CEEEEECCGGGSB------CTTCSSCGGGGCCGG--GGGSTTHHHHHH
T ss_pred             CCc-----chhhHHHHHHHHHHHHHHHcC---CcEEEEecceeec------cCCCCccccccCCCC--CccchhhHHHHH
Confidence            221     124689999999999999864   7788887643332      110000112233322  222334765444


Q ss_pred             HHHH---HhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961          186 LFEE---VEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  262 (397)
Q Consensus       186 l~~~---~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~  262 (397)
                      ..+.   ..+..+++++++||+.+||+.+.  .++.          . ....+.+.+..   .   +..+++++|++++.
T Consensus       138 ~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~--~~~~----------~-~~~~~~~~~~~---~---~~i~~~DvA~~~~~  198 (224)
T 3h2s_A          138 QYYEYQFLQMNANVNWIGISPSEAFPSGPA--TSYV----------A-GKDTLLVGEDG---Q---SHITTGNMALAILD  198 (224)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEECSBCCCCCC--CCEE----------E-ESSBCCCCTTS---C---CBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCcEEEEcCccccCCCcc--cCce----------e-cccccccCCCC---C---ceEeHHHHHHHHHH
Confidence            4432   22567899999999999995322  1110          0 11122222222   2   33455666899999


Q ss_pred             HhcCCCCCCCceeccCCCeeehHH
Q 015961          263 AAVDPYAKNEAFNCNNGDVFKWKH  286 (397)
Q Consensus       263 ~~~~~~~~g~~yni~~~~~~s~~e  286 (397)
                      ++.++...+++|++++.+..++.|
T Consensus       199 ~l~~~~~~g~~~~~~~~~~~~~~~  222 (224)
T 3h2s_A          199 QLEHPTAIRDRIVVRDADLEHHHH  222 (224)
T ss_dssp             HHHSCCCTTSEEEEEECC------
T ss_pred             HhcCccccCCEEEEecCcchhccc
Confidence            888888889999999877665543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.89  E-value=6.4e-24  Score=186.58  Aligned_cols=206  Identities=15%  Similarity=0.113  Sum_probs=145.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      |+++|||||||||||++++++|++     +|+  +|++++|++..   ..++++++.+|++|.+++.+++  +|.|+|++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~-----~g~~~~V~~~~r~~~~---~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a   73 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILS-----EPTLAKVIAPARKALA---EHPRLDNPVGPLAELLPQLDGS--IDTAFCCL   73 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHH-----CTTCCEEECCBSSCCC---CCTTEECCBSCHHHHGGGCCSC--CSEEEECC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHh-----CCCCCeEEEEeCCCcc---cCCCceEEeccccCHHHHHHhh--hcEEEECe
Confidence            668999999999999999999998     787  99999998755   2357888999999988777666  78899987


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      +.......+++..+++|+.++.+++++|++.+  +++++++||...|       +.                 +...|+.
T Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~-------~~-----------------~~~~y~~  127 (215)
T 2a35_A           74 GTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG--ARHYLVVSALGAD-------AK-----------------SSIFYNR  127 (215)
T ss_dssp             CCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCC-------TT-----------------CSSHHHH
T ss_pred             eeccccCCCHHHHHHhhHHHHHHHHHHHHHcC--CCEEEEECCcccC-------CC-----------------CccHHHH
Confidence            64332224667888999999999999998753  6788888754333       21                 1223887


Q ss_pred             HHHHHHHHhcCCCee-EEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 015961          183 EDILFEEVEKKEELS-WSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI  261 (397)
Q Consensus       183 e~~l~~~~~~~~g~~-~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~  261 (397)
                      .|...+...+..+++ ++++||+.+||+..  ...+...+      .   .....+ +.+     ..+..+++++|++++
T Consensus       128 sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~--~~~~~~~~------~---~~~~~~-~~~-----~~~~i~~~Dva~~~~  190 (215)
T 2a35_A          128 VKGELEQALQEQGWPQLTIARPSLLFGPRE--EFRLAEIL------A---APIARI-LPG-----KYHGIEACDLARALW  190 (215)
T ss_dssp             HHHHHHHHHTTSCCSEEEEEECCSEESTTS--CEEGGGGT------T---CCCC-----C-----HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCeEEEEeCceeeCCCC--cchHHHHH------H---Hhhhhc-cCC-----CcCcEeHHHHHHHHH
Confidence            777776665777899 99999999999432  22221111      1   111111 111     123445566688888


Q ss_pred             HHhcCCCCCCCceeccCCCeeehH
Q 015961          262 WAAVDPYAKNEAFNCNNGDVFKWK  285 (397)
Q Consensus       262 ~~~~~~~~~g~~yni~~~~~~s~~  285 (397)
                      .++.++.  +++||+++++..++.
T Consensus       191 ~~~~~~~--~~~~~i~~~~~~~~~  212 (215)
T 2a35_A          191 RLALEEG--KGVRFVESDELRKLG  212 (215)
T ss_dssp             HHHTCCC--SEEEEEEHHHHHHHH
T ss_pred             HHHhcCC--CCceEEcHHHHHHhh
Confidence            8876643  789999987665553

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.88  E-value=5.4e-23  Score=191.86  Aligned_cols=224  Identities=14%  Similarity=0.076  Sum_probs=153.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----NADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      .|+++||||||||+||++|+++|++     .|++|++++|++....     ....+++++.+|+.|++++.++++++|.|
T Consensus         9 ~m~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~v   83 (318)
T 2r6j_A            9 GMKSKILIFGGTGYIGNHMVKGSLK-----LGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVV   83 (318)
T ss_dssp             CCCCCEEEETTTSTTHHHHHHHHHH-----TTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHH-----CCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEE
Confidence            4567899999999999999999998     7999999999864210     01257899999999999999999999999


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCc
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  178 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~  178 (397)
                      +|+++..             ++.++++++++|++.+ ++++|++ |          .||..      .+|..+..|. ..
T Consensus        84 i~~a~~~-------------~~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~------~~~~~~~~p~-~~  131 (318)
T 2r6j_A           84 ISALAFP-------------QILDQFKILEAIKVAG-NIKRFLP-S----------DFGVE------EDRINALPPF-EA  131 (318)
T ss_dssp             EECCCGG-------------GSTTHHHHHHHHHHHC-CCCEEEC-S----------CCSSC------TTTCCCCHHH-HH
T ss_pred             EECCchh-------------hhHHHHHHHHHHHhcC-CCCEEEe-e----------ccccC------cccccCCCCc-ch
Confidence            9986531             1456789999998863 2677763 2          34421      1222222221 12


Q ss_pred             chhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhh-cCCCceecCCccccceeeecccHHHHH
Q 015961          179 YYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH-EGIPLRFPGTKAAWECYSIASDADLIA  257 (397)
Q Consensus       179 ~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~g~~~~~~~~~~~~da~~la  257 (397)
                      .| ..|...+.+.++.+++++++||+.+++.       +...+     +... ...++.+++++.....+++   ++++|
T Consensus       132 ~y-~sK~~~e~~~~~~~~~~~~lr~~~~~~~-------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~---~~Dva  195 (318)
T 2r6j_A          132 LI-ERKRMIRRAIEEANIPYTYVSANCFASY-------FINYL-----LRPYDPKDEITVYGTGEAKFAMNY---EQDIG  195 (318)
T ss_dssp             HH-HHHHHHHHHHHHTTCCBEEEECCEEHHH-------HHHHH-----HCTTCCCSEEEEETTSCCEEEEEC---HHHHH
T ss_pred             hH-HHHHHHHHHHHhcCCCeEEEEcceehhh-------hhhhh-----ccccCCCCceEEecCCCceeeEee---HHHHH
Confidence            35 4444444333667899999999887762       11111     0111 1233455666554445544   55568


Q ss_pred             HHHHHHhcCCCCCCCceeccC-CCeeehHHHHHHHHHHhCCCCC
Q 015961          258 EHQIWAAVDPYAKNEAFNCNN-GDVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       258 ~~~~~~~~~~~~~g~~yni~~-~~~~s~~el~~~i~~~~g~~~~  300 (397)
                      ++++.++.++...+++|++++ ++.+|+.|+++.+.+.+|.+..
T Consensus       196 ~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~  239 (318)
T 2r6j_A          196 LYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFK  239 (318)
T ss_dssp             HHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred             HHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCc
Confidence            888777766555577888875 4789999999999999998754

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.88  E-value=2.9e-23  Score=192.69  Aligned_cols=226  Identities=13%  Similarity=0.097  Sum_probs=152.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHccC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      +++|||||||||||++|+++|++     .|++|++++|++...          .....+++++.+|++|++++.++++++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~   78 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLD-----LGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV   78 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHH-----TTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHh-----CCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCC
Confidence            36899999999999999999998     799999999975421          001357899999999999999999999


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      |.|+|+++..             ++.++.+++++|++.+ ++++|++ |          .||..      ..|..+..|.
T Consensus        79 d~vi~~a~~~-------------~~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~------~~~~~~~~p~  127 (308)
T 1qyc_A           79 DVVISTVGSL-------------QIESQVNIIKAIKEVG-TVKRFFP-S----------EFGND------VDNVHAVEPA  127 (308)
T ss_dssp             SEEEECCCGG-------------GSGGGHHHHHHHHHHC-CCSEEEC-S----------CCSSC------TTSCCCCTTH
T ss_pred             CEEEECCcch-------------hhhhHHHHHHHHHhcC-CCceEee-c----------ccccC------ccccccCCcc
Confidence            9999986531             1456788999998863 3677773 2          34421      1222332221


Q ss_pred             CCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 015961          176 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  255 (397)
Q Consensus       176 ~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  255 (397)
                       ...| ..|...+.+.++.+++++++||+.++|..........  .      .......+.+++++.....+++   +++
T Consensus       128 -~~~y-~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~i~---~~D  194 (308)
T 1qyc_A          128 -KSVF-EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAG--L------TAPPRDKVVILGDGNARVVFVK---EED  194 (308)
T ss_dssp             -HHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTT--C------SSCCSSEEEEETTSCCEEEEEC---HHH
T ss_pred             -hhHH-HHHHHHHHHHHhcCCCeEEEEeceecccccccccccc--c------cCCCCCceEEecCCCceEEEec---HHH
Confidence             2236 5444444333566899999999999884221111000  0      0001223455666655555554   555


Q ss_pred             HHHHHHHHhcCCCCCCCceeccCC-CeeehHHHHHHHHHHhCCCCC
Q 015961          256 IAEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       256 la~~~~~~~~~~~~~g~~yni~~~-~~~s~~el~~~i~~~~g~~~~  300 (397)
                      +|++++.++.++...+++|+++++ +.+|++|+++.+.+.+|.+..
T Consensus       195 va~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~  240 (308)
T 1qyc_A          195 IGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE  240 (308)
T ss_dssp             HHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred             HHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence            688877766655556788888764 689999999999999998754

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.87  E-value=1.6e-22  Score=188.84  Aligned_cols=226  Identities=14%  Similarity=0.084  Sum_probs=152.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC-CCCC---------CCCCCceEEEccCCCHHHHHHHHcc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPNW---------NADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      |+++|||||||||||++|+++|++     .|++|++++|++ ....         ....+++++.+|++|++++.+++++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~   77 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLS-----FSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ   77 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHH-----TTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred             cccEEEEEcCCchhHHHHHHHHHh-----CCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC
Confidence            346899999999999999999998     799999999986 2110         0125789999999999999999999


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      +|.|+|+++..             ++.++++++++|++.+ ++++|++ |          .||..      .+|..+..|
T Consensus        78 ~d~vi~~a~~~-------------~~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~------~~~~~~~~p  126 (321)
T 3c1o_A           78 VDIVISALPFP-------------MISSQIHIINAIKAAG-NIKRFLP-S----------DFGCE------EDRIKPLPP  126 (321)
T ss_dssp             CSEEEECCCGG-------------GSGGGHHHHHHHHHHC-CCCEEEC-S----------CCSSC------GGGCCCCHH
T ss_pred             CCEEEECCCcc-------------chhhHHHHHHHHHHhC-CccEEec-c----------ccccC------ccccccCCC
Confidence            99999986531             1556789999998763 2677762 2          34421      122222222


Q ss_pred             CCCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHh-h-hcCCCceecCCccccceeeeccc
Q 015961          175 APNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC-K-HEGIPLRFPGTKAAWECYSIASD  252 (397)
Q Consensus       175 ~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~-~-~~~~~~~~~g~~~~~~~~~~~~d  252 (397)
                      . ...| ..|...+.+.+..+++++++||+.++|.       +...+   .... . ..+..+...+++.....++   +
T Consensus       127 ~-~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~~~~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i---~  191 (321)
T 3c1o_A          127 F-ESVL-EKKRIIRRAIEAAALPYTYVSANCFGAY-------FVNYL---LHPSPHPNRNDDIVIYGTGETKFVLN---Y  191 (321)
T ss_dssp             H-HHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHH-------HHHHH---HCCCSSCCTTSCEEEETTSCCEEEEE---C
T ss_pred             c-chHH-HHHHHHHHHHHHcCCCeEEEEeceeccc-------ccccc---ccccccccccCceEEecCCCcceeEe---e
Confidence            1 1236 5444444333566899999999988872       11111   0000 0 0122344555555444454   4


Q ss_pred             HHHHHHHHHHHhcCCCCCCCceeccC-CCeeehHHHHHHHHHHhCCCCCC
Q 015961          253 ADLIAEHQIWAAVDPYAKNEAFNCNN-GDVFKWKHLWKVLAEQFGIEDYG  301 (397)
Q Consensus       253 a~~la~~~~~~~~~~~~~g~~yni~~-~~~~s~~el~~~i~~~~g~~~~~  301 (397)
                      ++++|++++.++.++...+++|++++ ++.+|++|+++.+.+.+|.+...
T Consensus       192 ~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~  241 (321)
T 3c1o_A          192 EEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKK  241 (321)
T ss_dssp             HHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCE
T ss_pred             HHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCccee
Confidence            55568888877776655678888876 47899999999999999987543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.87  E-value=1.5e-22  Score=187.81  Aligned_cols=226  Identities=15%  Similarity=0.110  Sum_probs=150.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC-CCCC----------CCCCceEEEccCCCHHHHHHHHcc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK-PNWN----------ADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~-~~~~----------~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      +++|||||||||||++|+++|++     .|++|++++|++. ....          ...+++++.+|+.|++++.+++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIK-----AGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHH-----HTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred             CcEEEEECCCchHHHHHHHHHHh-----CCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence            36799999999999999999998     7999999999861 1000          124789999999999999999999


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      +|.|+|+++...             +.++.+++++|++.+ .+++|++ |          .||..      .++..+..|
T Consensus        77 ~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~------~~~~~~~~p  125 (307)
T 2gas_A           77 VDIVICAAGRLL-------------IEDQVKIIKAIKEAG-NVKKFFP-S----------EFGLD------VDRHDAVEP  125 (307)
T ss_dssp             CSEEEECSSSSC-------------GGGHHHHHHHHHHHC-CCSEEEC-S----------CCSSC------TTSCCCCTT
T ss_pred             CCEEEECCcccc-------------cccHHHHHHHHHhcC-CceEEee-c----------ccccC------cccccCCCc
Confidence            999999854211             456788999998753 3677772 2          34421      122222222


Q ss_pred             CCCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 015961          175 APNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD  254 (397)
Q Consensus       175 ~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~  254 (397)
                      . ...| ..|...+.+.+..+++++++||+.+++....   .+.... .    .......+.+++++.....++   +++
T Consensus       126 ~-~~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~---~~~~~~-~----~~~~~~~~~~~~~~~~~~~~i---~~~  192 (307)
T 2gas_A          126 V-RQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLR---NLAQLD-A----TDPPRDKVVILGDGNVKGAYV---TEA  192 (307)
T ss_dssp             H-HHHH-HHHHHHHHHHHHHTCCBEEEECCEETTTTGG---GTTCTT-C----SSCCSSEEEEETTSCSEEEEE---CHH
T ss_pred             c-hhHH-HHHHHHHHHHHHcCCCeEEEEcceeeccccc---cccccc-c----ccCCCCeEEEecCCCcceEEe---eHH
Confidence            1 2236 5444444333566899999999998873110   100000 0    000122334455555444454   455


Q ss_pred             HHHHHHHHHhcCCCCCCCceeccCC-CeeehHHHHHHHHHHhCCCCC
Q 015961          255 LIAEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       255 ~la~~~~~~~~~~~~~g~~yni~~~-~~~s~~el~~~i~~~~g~~~~  300 (397)
                      ++|++++.++.++...+++|++.++ +.+|++|+++.+.+.+|.+..
T Consensus       193 Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~  239 (307)
T 2gas_A          193 DVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLE  239 (307)
T ss_dssp             HHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCE
T ss_pred             HHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCc
Confidence            5688888777665556777888764 689999999999999998754

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.87  E-value=2.8e-21  Score=168.34  Aligned_cols=201  Identities=12%  Similarity=0.027  Sum_probs=139.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |+||||||||+||++++++|++     +|++|++++|++..... ...+++++.+|++|++++.++++++|.|+|+++..
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQ-----AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHH-----CCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence            6899999999999999999998     79999999998653211 13578999999999999999999999999997643


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  185 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~  185 (397)
                      ..  .+   ..++|+.++.++++++++.+  +++++++||..+|       +..  ...      +.   +...|...|.
T Consensus        79 ~~--~~---~~~~n~~~~~~~~~~~~~~~--~~~~v~~Ss~~~~-------~~~--~~~------~~---~~~~y~~~K~  133 (206)
T 1hdo_A           79 ND--LS---PTTVMSEGARNIVAAMKAHG--VDKVVACTSAFLL-------WDP--TKV------PP---RLQAVTDDHI  133 (206)
T ss_dssp             TC--CS---CCCHHHHHHHHHHHHHHHHT--CCEEEEECCGGGT-------SCT--TCS------CG---GGHHHHHHHH
T ss_pred             CC--CC---ccchHHHHHHHHHHHHHHhC--CCeEEEEeeeeec-------cCc--ccc------cc---cchhHHHHHH
Confidence            22  11   12589999999999998764  6789988865444       321  010      10   2233776666


Q ss_pred             HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 015961          186 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  265 (397)
Q Consensus       186 l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~  265 (397)
                      ..+...++.+++++++||+.+ |+.+... .+.          ...+.   .++     ..++   +.+++|++++.++.
T Consensus       134 ~~e~~~~~~~i~~~~lrp~~~-~~~~~~~-~~~----------~~~~~---~~~-----~~~i---~~~Dva~~~~~~~~  190 (206)
T 1hdo_A          134 RMHKVLRESGLKYVAVMPPHI-GDQPLTG-AYT----------VTLDG---RGP-----SRVI---SKHDLGHFMLRCLT  190 (206)
T ss_dssp             HHHHHHHHTCSEEEEECCSEE-ECCCCCS-CCE----------EESSS---CSS-----CSEE---EHHHHHHHHHHTTS
T ss_pred             HHHHHHHhCCCCEEEEeCCcc-cCCCCCc-ceE----------ecccC---CCC-----CCcc---CHHHHHHHHHHHhc
Confidence            655444667899999999997 4222211 000          00000   011     1334   44556888888777


Q ss_pred             CCCCCCCceeccCCC
Q 015961          266 DPYAKNEAFNCNNGD  280 (397)
Q Consensus       266 ~~~~~g~~yni~~~~  280 (397)
                      ++...|++||++++.
T Consensus       191 ~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          191 TDEYDGHSTYPSHQY  205 (206)
T ss_dssp             CSTTTTCEEEEECCC
T ss_pred             Cccccccceeeeccc
Confidence            766678999999864

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.86  E-value=9.5e-22  Score=185.86  Aligned_cols=227  Identities=12%  Similarity=0.008  Sum_probs=152.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEcc-CCCHHHHHHHHccCCCeeE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCD-VSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~D-l~d~~~l~~~~~~~~~V~h  100 (397)
                      +++|||||||||||++|+++|++     +|++|++++|++...    ....++++++.+| ++|++++.++++++|.|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~   79 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAA-----VGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   79 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHH-----TTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence            57899999999999999999998     799999999986532    1112478899999 9999999999999999998


Q ss_pred             EEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961          101 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  180 (397)
Q Consensus       101 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y  180 (397)
                      +++.   ..      .+.|..+ ++++++|++.+ ++++|+++||...     ..|+.              .+...  |
T Consensus        80 ~a~~---~~------~~~~~~~-~~l~~aa~~~g-~v~~~V~~SS~~~-----~~~~~--------------~~~~~--y  127 (352)
T 1xgk_A           80 NTTS---QA------GDEIAIG-KDLADAAKRAG-TIQHYIYSSMPDH-----SLYGP--------------WPAVP--M  127 (352)
T ss_dssp             CCCS---TT------SCHHHHH-HHHHHHHHHHS-CCSEEEEEECCCG-----GGTSS--------------CCCCT--T
T ss_pred             cCCC---CC------cHHHHHH-HHHHHHHHHcC-CccEEEEeCCccc-----cccCC--------------CCCcc--H
Confidence            7532   11      1346766 99999998763 2678888875321     12221              01112  5


Q ss_pred             hHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCc-chhHHHHHHHHHHhhhcCCC-ceecCCccccceeeecccH-HHHH
Q 015961          181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEGIP-LRFPGTKAAWECYSIASDA-DLIA  257 (397)
Q Consensus       181 ~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~g~~~~~~~~~~~~da-~~la  257 (397)
                      ...|...+.+.+..+++++++||+ +||+..... ..+....      ....+.. +..++++++...++   ++ +++|
T Consensus       128 ~~sK~~~E~~~~~~gi~~~ivrpg-~~g~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i---~v~~Dva  197 (352)
T 1xgk_A          128 WAPKFTVENYVRQLGLPSTFVYAG-IYNNNFTSLPYPLFQME------LMPDGTFEWHAPFDPDIPLPWL---DAEHDVG  197 (352)
T ss_dssp             THHHHHHHHHHHTSSSCEEEEEEC-EEGGGCBSSSCSSCBEE------ECTTSCEEEEESSCTTSCEEEE---CHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEEecc-eecCCchhccccccccc------ccCCCceEEeeccCCCCceeeE---ecHHHHH
Confidence            566665555446679999999976 788532211 1110000      0012322 23355555444444   44 4557


Q ss_pred             HHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961          258 EHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       258 ~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~  300 (397)
                      .+++.++.++.  ..+++||+++ +.+|+.|+++.+.+.+|.+..
T Consensus       198 ~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~  241 (352)
T 1xgk_A          198 PALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT  241 (352)
T ss_dssp             HHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred             HHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCc
Confidence            77777765532  2578999995 679999999999999998753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.82  E-value=3.5e-19  Score=158.79  Aligned_cols=202  Identities=12%  Similarity=0.034  Sum_probs=128.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      |+|+||||||||+||++|+++|++     .| ++|++++|++.... ....+++++.+|++|++++.++++++|.|+|++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~-----~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a   96 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLAD-----KQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL   96 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTT-----CTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHh-----CCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence            447899999999999999999999     78 89999999865421 123578999999999999999999999999986


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      +.     ..       ....++++++++++.+  +.+|+++||..+|....       ....+..+..+..+  ...|..
T Consensus        97 ~~-----~~-------~~~~~~~~~~~~~~~~--~~~iV~iSS~~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~  153 (236)
T 3qvo_A           97 TG-----ED-------LDIQANSVIAAMKACD--VKRLIFVLSLGIYDEVP-------GKFVEWNNAVIGEP--LKPFRR  153 (236)
T ss_dssp             CS-----TT-------HHHHHHHHHHHHHHTT--CCEEEEECCCCC-----------------------CGG--GHHHHH
T ss_pred             CC-----Cc-------hhHHHHHHHHHHHHcC--CCEEEEEecceecCCCC-------cccccchhhcccch--HHHHHH
Confidence            42     11       1135678999998764  77899998766654320       00111222222111  111222


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961          183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  262 (397)
Q Consensus       183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~  262 (397)
                         ..++. +..+++++++||+.+++........    .        ..+.+  ..+      .+.   +.+++|.++++
T Consensus       154 ---~~~~l-~~~gi~~~~vrPg~i~~~~~~~~~~----~--------~~~~~--~~~------~~i---~~~DvA~~i~~  206 (236)
T 3qvo_A          154 ---AADAI-EASGLEYTILRPAWLTDEDIIDYEL----T--------SRNEP--FKG------TIV---SRKSVAALITD  206 (236)
T ss_dssp             ---HHHHH-HTSCSEEEEEEECEEECCSCCCCEE----E--------CTTSC--CSC------SEE---EHHHHHHHHHH
T ss_pred             ---HHHHH-HHCCCCEEEEeCCcccCCCCcceEE----e--------ccCCC--CCC------cEE---CHHHHHHHHHH
Confidence               12222 5678999999999999842211000    0        00111  111      223   44556888888


Q ss_pred             HhcCCC-CCCCceeccCCCe
Q 015961          263 AAVDPY-AKNEAFNCNNGDV  281 (397)
Q Consensus       263 ~~~~~~-~~g~~yni~~~~~  281 (397)
                      ++..+. ..+++|+++++..
T Consensus       207 ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          207 IIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             HHHSTTTTTTEEEEEECSSC
T ss_pred             HHcCcccccCeeEEecCCCC
Confidence            887765 5689999998754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.82  E-value=3.4e-20  Score=165.85  Aligned_cols=153  Identities=15%  Similarity=0.108  Sum_probs=117.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ++|+||||||||+||++++++|++     +|+  +|++++|++..... ...++.++.+|++|++++.++++++|.|+|+
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~-----~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   91 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILE-----QGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCC   91 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHH-----HTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHc-----CCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEEC
Confidence            357999999999999999999998     899  99999998654211 1246789999999999999999999999999


Q ss_pred             EEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh
Q 015961          102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  181 (397)
Q Consensus       102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~  181 (397)
                      |+.... ..+.+..+++|+.++.++++++++.+  +.+++++||...|       +.               +  ...|+
T Consensus        92 ag~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~iv~~SS~~~~-------~~---------------~--~~~Y~  144 (242)
T 2bka_A           92 LGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLSSKGAD-------KS---------------S--NFLYL  144 (242)
T ss_dssp             CCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCC-------TT---------------C--SSHHH
T ss_pred             CCcccc-cCCcccceeeeHHHHHHHHHHHHHCC--CCEEEEEccCcCC-------CC---------------C--cchHH
Confidence            764221 12456778999999999999998753  6788888764333       10               1  12377


Q ss_pred             HHHHHHHHHhcCCCe-eEEEEcCCceeec
Q 015961          182 LEDILFEEVEKKEEL-SWSVHRPDTIFGF  209 (397)
Q Consensus       182 ~e~~l~~~~~~~~g~-~~~ilRp~~v~G~  209 (397)
                      ..|...+...+..++ +++++||+.++|+
T Consensus       145 ~sK~~~e~~~~~~~~~~~~~vrpg~v~~~  173 (242)
T 2bka_A          145 QVKGEVEAKVEELKFDRYSVFRPGVLLCD  173 (242)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEEECCEEECT
T ss_pred             HHHHHHHHHHHhcCCCCeEEEcCceecCC
Confidence            766666555567788 6999999999994

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.78  E-value=1.8e-18  Score=152.44  Aligned_cols=153  Identities=12%  Similarity=0.083  Sum_probs=109.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcc-CCCCCCCCcEEEEEeCCCC-CCCC---CCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPK-PNWN---ADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~-~~~~~~~g~~V~~l~R~~~-~~~~---~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      .|+|+||||||||+||++++++|+ +     .|++|++++|++. ....   ...+++++.+|++|.+++.++++++|.|
T Consensus         3 ~mmk~vlVtGasg~iG~~~~~~l~~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   77 (221)
T 3r6d_A            3 AMYXYITILGAAGQIAQXLTATLLTY-----TDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVV   77 (221)
T ss_dssp             CSCSEEEEESTTSHHHHHHHHHHHHH-----CCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             ceEEEEEEEeCCcHHHHHHHHHHHhc-----CCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEE
Confidence            355779999999999999999999 7     7999999999865 3210   2367899999999999999999999999


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCc
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  178 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~  178 (397)
                      +|+++..             |+. ++++++++++.+  +.+++++||...|...          ..+..+...  +....
T Consensus        78 v~~ag~~-------------n~~-~~~~~~~~~~~~--~~~iv~iSs~~~~~~~----------~~~~~~~~~--~~~~~  129 (221)
T 3r6d_A           78 FVGAMES-------------GSD-MASIVKALSRXN--IRRVIGVSMAGLSGEF----------PVALEKWTF--DNLPI  129 (221)
T ss_dssp             EESCCCC-------------HHH-HHHHHHHHHHTT--CCEEEEEEETTTTSCS----------CHHHHHHHH--HTSCH
T ss_pred             EEcCCCC-------------Chh-HHHHHHHHHhcC--CCeEEEEeeceecCCC----------Ccccccccc--ccccc
Confidence            9986521             445 899999998754  6788888865544321          000000000  00010


Q ss_pred             chhHHHHHHHHHhcCCCeeEEEEcCCceeec
Q 015961          179 YYTLEDILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       179 ~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                      .|...|...+...+..+++++++||+.++++
T Consensus       130 ~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          130 SYVQGERQARNVLRESNLNYTILRLTWLYND  160 (221)
T ss_dssp             HHHHHHHHHHHHHHHSCSEEEEEEECEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEechhhcCC
Confidence            3665544444333667999999999999994

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.77  E-value=3.1e-18  Score=156.34  Aligned_cols=230  Identities=13%  Similarity=0.081  Sum_probs=148.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+....      .....++.++.+|++|.+++.++++     
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVR-----YGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999974221      1111268899999999998887776     


Q ss_pred             --cCCCeeEEEEecccC----C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN----R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~----~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                        ++|.|+|+|+.....    .    ++....+++|+.++.++++++...  ..+..+++++||...|..          
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------  159 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA----------  159 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC----------
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCC----------
Confidence              678899988753211    1    134667899999999999988764  123568888875443321          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (397)
                        .         +.....|+..|.     ...+..  ...|++++++||+.|+++..............  .+......+
T Consensus       160 --~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~  226 (278)
T 2bgk_A          160 --G---------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVE--ELAHQAANL  226 (278)
T ss_dssp             --C---------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHH--HHHHHTCSS
T ss_pred             --C---------CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHH--Hhhhccccc
Confidence              0         001122654333     222221  24689999999999999532221110011100  011111111


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeehHHHHHHHHHH
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAEQ  294 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~~el~~~i~~~  294 (397)
                            .      ....+..++|.++++++..+  ...|++|++.++..++++|+++.+.+.
T Consensus       227 ------~------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          227 ------K------GTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             ------C------SCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             ------c------cccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence                  0      11234556688887777543  345899999999999999999887654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.76  E-value=9.1e-19  Score=157.64  Aligned_cols=224  Identities=13%  Similarity=0.028  Sum_probs=139.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc----cCCCeeEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTDVTHIF  102 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~----~~~~V~h~a  102 (397)
                      |+||||||+||||++++++|++     +|++|++++|++....   .   .+.+|++|.+++..+++    ++|.|+|+|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~---~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~~A   70 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLAR-----AGHTVIGIDRGQADIE---A---DLSTPGGRETAVAAVLDRCGGVLDGLVCCA   70 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSSSSEE---C---CTTSHHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEeCChhHcc---c---cccCCcccHHHHHHHHHHcCCCccEEEECC
Confidence            5899999999999999999998     8999999999764321   1   15789999988888876    688899987


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC-------CCCCCC-
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF-------TEDMPR-  172 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~-------~E~~p~-  172 (397)
                      +... ...+....+++|+.++.++++++.+.  ..+..+++++||...|....        ...+.       +|+.+. 
T Consensus        71 g~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           71 GVGV-TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGA--------AELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             CCCT-TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTG--------GGCHHHHHHHHTCHHHHHH
T ss_pred             CCCC-cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccc--------cccchhhhhcccchhhhhh
Confidence            6432 13467888999999999999988764  22357888888766553210        00000       011000 


Q ss_pred             ----CCCCCcchhHHHHHHHHH----hc---CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCc
Q 015961          173 ----LDAPNFYYTLEDILFEEV----EK---KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK  241 (397)
Q Consensus       173 ----~~~~~~~y~~e~~l~~~~----~~---~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~  241 (397)
                          .+.+...|+..|...+.+    .+   ..|++++++||+.|+|+...   ......     .......  .+.+  
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~---~~~~~~-----~~~~~~~--~~~~--  209 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ---ASKADP-----RYGESTR--RFVA--  209 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH---HHHHCT-----TTHHHHH--SCCC--
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh---hcccch-----hhHHHHH--HHHH--
Confidence                001122366544433221    12   26899999999999993110   000000     0000000  0000  


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeehHH
Q 015961          242 AAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKH  286 (397)
Q Consensus       242 ~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~~e  286 (397)
                       ....+   .+.+++|.++++++..+  ...|++||++++..++++|
T Consensus       210 -~~~~~---~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          210 -PLGRG---SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             -TTSSC---BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             -HhcCC---CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence             11123   34555688888877654  3468899999988777664

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.74  E-value=2.9e-17  Score=150.20  Aligned_cols=228  Identities=13%  Similarity=-0.031  Sum_probs=142.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+.....    ....++.++.+|++|.+++..+++       
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVA-----AGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            458999999999999999999999     8999999999764320    012478899999999998877776       


Q ss_pred             cCCCeeEEEEecccC----C--CcHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN----R--STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                      ++|.|+|+|+.....    .  ++....+++|+.|    +++++..+++.+  ..+++++||...+.      +      
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~------~------  144 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG--SGSVVNISSFGGQL------S------  144 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGTC------C------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEEcCccccC------C------
Confidence            678899998754321    1  1456678999999    555555555433  56788777532221      0      


Q ss_pred             CCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCc--------chhHHHHHHHHHHh
Q 015961          164 PPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSL--------MNLVGALCVYAAVC  228 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~i~  228 (397)
                              ..+  ...|+..|     +...+.  ....|+++.++||+.|.++-.+..        ..+.....   ...
T Consensus       145 --------~~~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~  211 (281)
T 3m1a_A          145 --------FAG--FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVG---PTR  211 (281)
T ss_dssp             --------CTT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHH---HHH
T ss_pred             --------CCC--chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhH---HHH
Confidence                    001  22366433     332222  133689999999999987421110        01111110   000


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhC
Q 015961          229 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG  296 (397)
Q Consensus       229 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g  296 (397)
                      +     +......      ....+++++|+++++++..+ ..+..|+++++....+.+....+.+.++
T Consensus       212 ~-----~~~~~~~------~~~~~~~dva~a~~~~~~~~-~~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          212 Q-----LVQGSDG------SQPGDPAKAAAAIRLALDTE-KTPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             H-----HHHC-----------CBCHHHHHHHHHHHHHSS-SCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             H-----HHhhccC------CCCCCHHHHHHHHHHHHhCC-CCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            0     0001111      12334566688888887664 4567899998877788887777776654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=3.3e-17  Score=146.29  Aligned_cols=209  Identities=15%  Similarity=0.094  Sum_probs=135.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc------cCCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS------QLTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~------~~~~V   98 (397)
                      |+|+||||||+|+||++++++|++     +|++|++++|++. .    ..+.++.+|++|.+++.++++      .+|.+
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~-~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKA-----RGYRVVVLDLRRE-G----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----HTCEEEEEESSCC-S----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEccCcc-c----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            568999999999999999999998     8999999999865 1    467899999999999888776      56778


Q ss_pred             eEEEEecccCC------C----cHHHHHHhHHHHHHHHHHHHcccCC--------CcceEEEecCCccccccccccCCCC
Q 015961           99 THIFYVTWTNR------S----TEAENCKINGSMFRNVLRAVIPNAP--------NLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        99 ~h~a~~~~~~~------~----~~~~~~~~nv~gt~~ll~a~~~~~~--------~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                      +|+|+......      +    +....+++|+.++.++++++.+...        ...+++++||...|...        
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  142 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ--------  142 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence            88876432110      1    4567789999999999998875411        12378888764433210        


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                   + ....|+..|     +...+.  ....|++++++||+.|+++......   ..+.  ..+.+  ..
T Consensus       143 -------------~-~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~--~~~~~--~~  201 (242)
T 1uay_A          143 -------------I-GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAK--ASLAA--QV  201 (242)
T ss_dssp             -------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHH--HHHHT--TC
T ss_pred             -------------C-CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---hhHH--HHHHh--hC
Confidence                         0 112255433     222221  1345899999999999984211111   1110  00111  22


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeee
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFK  283 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s  283 (397)
                      |+  ++         ...+.+++|.++++++......|+.|++.+|..++
T Consensus       202 ~~--~~---------~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          202 PF--PP---------RLGRPEEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             CS--SC---------SCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             CC--cc---------cCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence            21  11         12345666888888776655678999998876543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.72  E-value=2.5e-16  Score=142.23  Aligned_cols=209  Identities=14%  Similarity=0.142  Sum_probs=135.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~   97 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+.....  ...+.++.+|++|++++.++++       ++|.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRD-----RNYRVVATSRSIKPSA--DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSCCCCS--STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChhhcc--cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            468999999999999999999999     8999999999865432  2478899999999998877766       6788


Q ss_pred             eeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        98 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      ++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+++++||...+       ..     .     
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~-------~~-----~-----  162 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVD-------QP-----M-----  162 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTT-------SC-----B-----
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc-------cC-----C-----
Confidence            999887533211      145677899999999999987432  1235677777643221       10     0     


Q ss_pred             CCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          170 MPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       170 ~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                       +  ..+...|+..     .+...+.  ....|+++.+++|+.|.++  .........+      .  ...|+       
T Consensus       163 -~--~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~--~~~~~~~~~~------~--~~~p~-------  222 (260)
T 3un1_A          163 -V--GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTP--MHPAETHSTL------A--GLHPV-------  222 (260)
T ss_dssp             -T--TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCT--TSCGGGHHHH------H--TTSTT-------
T ss_pred             -C--CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCC--CCCHHHHHHH------h--ccCCC-------
Confidence             0  0112335532     2222222  1345899999999999983  2211111111      1  11221       


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCee
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVF  282 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~  282 (397)
                           ....+..++|.+++++.......|++|++.+|...
T Consensus       223 -----~r~~~~~dva~av~~L~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          223 -----GRMGEIRDVVDAVLYLEHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             -----SSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             -----CCCcCHHHHHHHHHHhcccCCCCCcEEEECCCeec
Confidence                 11223555677777775555567999999887643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.72  E-value=2.4e-17  Score=148.48  Aligned_cols=215  Identities=12%  Similarity=0.073  Sum_probs=137.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|++++.++++    
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFAT-----AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHT-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 012467889999999998887776    


Q ss_pred             ---cCCCeeEEEEecccC-----CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN-----RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~-----~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                         ++|.|+|+|+.....     .++....+++|+.++.++++++...  ..+..+++++||...|       ..     
T Consensus        85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-----  152 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE-------NK-----  152 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------CC-----
T ss_pred             hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc-------CC-----
Confidence               788899998753321     1145677899999999999888532  1135778877753322       11     


Q ss_pred             CCCCCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCce
Q 015961          164 PPFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLR  236 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (397)
                      .         + +...|+..     .+...+.  ....++++.++||+.++++......  ...+..  ...  .+.|+.
T Consensus       153 ~---------~-~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~--~~~--~~~~~~  216 (255)
T 1fmc_A          153 N---------I-NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQ--KML--QHTPIR  216 (255)
T ss_dssp             C---------T-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHH--HHH--HTCSSC
T ss_pred             C---------C-CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc--ChHHHH--HHH--hcCCcc
Confidence            0         0 11236543     3332222  1345899999999999984211110  011100  011  122211


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeeh
Q 015961          237 FPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKW  284 (397)
Q Consensus       237 ~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~  284 (397)
                               .   ..+..++|.++++++..+.  ..|++||+.+|..+|+
T Consensus       217 ---------~---~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          217 ---------R---LGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             ---------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             ---------c---CCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence                     1   2244556777777765432  3588999999887775

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.71  E-value=1.6e-17  Score=153.61  Aligned_cols=228  Identities=15%  Similarity=0.048  Sum_probs=143.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------C--CCCCceEEEccCCCHHHHHHHHcc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------N--ADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+.....      .  ...++.++.+|++|.+++.++++.  
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSS-----LGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     8999999999753210      0  024688999999999988777654  


Q ss_pred             -----CCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCC
Q 015961           95 -----LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        95 -----~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           +|.|+|+|+.....    .  ++....+++|+.++.++++++...   ..+..+++++||...+..         
T Consensus       100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~---------  170 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG---------  170 (302)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC---------
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC---------
Confidence                 47789987743221    1  145678899999999998887543   123467887775433211         


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCC-CcchhHHHHHHHHHHhhhcC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPY-SLMNLVGALCVYAAVCKHEG  232 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~i~~~~~  232 (397)
                         .         + ....|+.     +.+...+.  ....|++++++||+.|+++... .........   ..+.+  .
T Consensus       171 ---~---------~-~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~--~  232 (302)
T 1w6u_A          171 ---S---------G-FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFE---KEMIG--R  232 (302)
T ss_dssp             ---C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHH---HHHHT--T
T ss_pred             ---C---------C-CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhH---HHHHh--c
Confidence               0         1 1122554     33333222  1236899999999999984211 111000000   00111  2


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhC
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFG  296 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g  296 (397)
                      .|+   +      .   ..+..++|.++++++....  ..|++|++.+|..++++|+++.+.+..|
T Consensus       233 ~p~---~------~---~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          233 IPC---G------R---LGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             CTT---S------S---CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             CCc---C------C---CCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            221   0      1   2245556788777765432  3588999999988888888777766544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.70  E-value=5.2e-17  Score=148.30  Aligned_cols=230  Identities=13%  Similarity=0.068  Sum_probs=132.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|++...          .....++.++.+|++|++++.++++ 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAR-----EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST   79 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHH
Confidence            457899999999999999999999     899999999975311          0012357889999999998887776 


Q ss_pred             ------cCCCeeEEEEeccc----------CCCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccc
Q 015961           94 ------QLTDVTHIFYVTWT----------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEA  155 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~----------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~  155 (397)
                            ++|.++|+|+....          ..++.+..+++|+.|+.++++++...  ..+ .+++++||....      
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~------  152 (278)
T 1spx_A           80 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASG------  152 (278)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSS------
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccc------
Confidence                  78889998764321          11234567899999999999988654  112 577777753220      


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHH---HH-H
Q 015961          156 FGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGAL---CV-Y  224 (397)
Q Consensus       156 ~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~---~~-~  224 (397)
                      +..              .+ ....|+..|.     ...+.  ....|++++++||+.|.++-...........   .. .
T Consensus       153 ~~~--------------~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  217 (278)
T 1spx_A          153 LHA--------------TP-DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTM  217 (278)
T ss_dssp             SSC--------------CT-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHH
T ss_pred             ccC--------------CC-CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHH
Confidence            110              01 1122554322     22211  1346899999999999984211100000000   00 0


Q ss_pred             HHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC---CCCCceeccCCCeeehHHHHHHHHHHh
Q 015961          225 AAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY---AKNEAFNCNNGDVFKWKHLWKVLAEQF  295 (397)
Q Consensus       225 ~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~---~~g~~yni~~~~~~s~~el~~~i~~~~  295 (397)
                      ..+.+  ..|+            ....+..++|.++++++..+.   ..|++|++.+|...++.|+++.+.+.+
T Consensus       218 ~~~~~--~~p~------------~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          218 ATMKE--CVPA------------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHHHH--HCTT------------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             HHHHh--cCCC------------cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            00111  1111            112345556777777765432   458999999999999999999887754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.68  E-value=2.4e-16  Score=141.39  Aligned_cols=211  Identities=15%  Similarity=0.073  Sum_probs=131.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      |+|+||||||+|+||++++++|++     +|++|++++|+....        .....++.++.+|++|++++.++++   
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLA-----RGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATM   75 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            568999999999999999999998     899999999975311        0012357899999999998877776   


Q ss_pred             ----cCCCeeEEEEecccCC---------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCC
Q 015961           94 ----QLTDVTHIFYVTWTNR---------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~---------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                          ++|.|+|+|+......         ++.+..+++|+.++.++++++...  ..+..+++++||...+.      + 
T Consensus        76 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------~-  148 (250)
T 2cfc_A           76 EQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV------A-  148 (250)
T ss_dssp             HHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C-
T ss_pred             HHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc------C-
Confidence                6788999887532211         145667899999998777766442  11257888877533221      1 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHHHhhh
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAAVCKH  230 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~i~~~  230 (397)
                           .         + ....|+..|     +...+.  ....|++++++||+.|+++  ....... ..+.  ..+.+ 
T Consensus       149 -----~---------~-~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~--~~~~~~~~~~~~--~~~~~-  208 (250)
T 2cfc_A          149 -----F---------P-GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETP--MTQWRLDQPELR--DQVLA-  208 (250)
T ss_dssp             -----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCST--TTHHHHTSHHHH--HHHHT-
T ss_pred             -----C---------C-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccC--ccccccCCHHHH--HHHHh-
Confidence                 0         1 112355433     232222  1345899999999999993  2111010 0110  00111 


Q ss_pred             cCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961          231 EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  280 (397)
Q Consensus       231 ~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~  280 (397)
                       ..|+            ....+..++|.++++++..+.  ..|+++++.+|.
T Consensus       209 -~~~~------------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          209 -RIPQ------------KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             -TCTT------------CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             -cCCC------------CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence             1221            112345566888888776543  348889988763

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.67  E-value=7.8e-16  Score=141.43  Aligned_cols=229  Identities=14%  Similarity=0.045  Sum_probs=140.7

Q ss_pred             ccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHH
Q 015961           15 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        15 ~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      .|++...++..+|+||||||+|+||++++++|++     +|++|++++|+....    .....++.++.+|++|.+++.+
T Consensus         5 ~~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A            5 GWTAADLPSFAQRTVVITGANSGLGAVTARELAR-----RGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             CCCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHH
T ss_pred             CCChhhccCCCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHH
Confidence            4666666667789999999999999999999999     899999999975321    0012468899999999999999


Q ss_pred             HHccC---CCeeEEEEecccC----CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           91 KLSQL---TDVTHIFYVTWTN----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        91 ~~~~~---~~V~h~a~~~~~~----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                      +++.+   |.++|.|+.....    .++.+..+++|+.|+.++++++....  ..+|+++||...+.+.      . ...
T Consensus        80 ~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~--~~riv~isS~~~~~~~------~-~~~  150 (291)
T 3rd5_A           80 FADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL--TDRVVTVSSMAHWPGR------I-NLE  150 (291)
T ss_dssp             HHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE--EEEEEEECCGGGTTCC------C-CSS
T ss_pred             HHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HhheeEeechhhccCC------C-Ccc
Confidence            88854   5677776643221    22557789999999999999998763  3578888875544321      0 001


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHH-----HHHH--hcCCC--eeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc-CC
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDIL-----FEEV--EKKEE--LSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE-GI  233 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~l-----~~~~--~~~~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~-~~  233 (397)
                      ....+..+..+  ...|+..|..     ..+.  ....|  +++..++|+.|..+-....   ...+      .+.. ..
T Consensus       151 ~~~~~~~~~~~--~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~---~~~~------~~~~~~~  219 (291)
T 3rd5_A          151 DLNWRSRRYSP--WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS---GRKL------GDALMSA  219 (291)
T ss_dssp             CTTCSSSCCCH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------
T ss_pred             cccccccCCCC--cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc---chHH------HHHHHHH
Confidence            11111112111  2236643332     1111  02234  9999999999876211110   0001      0000 00


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNG  279 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~  279 (397)
                      +..           .-..+..++|..+++++..+...|+.+++.+|
T Consensus       220 ~~~-----------~~~~~~~~~A~~~~~l~~~~~~~G~~~~vdgG  254 (291)
T 3rd5_A          220 ATR-----------VVATDADFGARQTLYAASQDLPGDSFVGPRFG  254 (291)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHSCCCTTCEEEETTS
T ss_pred             HHH-----------HHhCCHHHHHHHHHHHHcCCCCCCceeCCccc
Confidence            100           01123556688888888776667887877543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.67  E-value=1.9e-16  Score=143.27  Aligned_cols=215  Identities=14%  Similarity=0.063  Sum_probs=130.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCC--------CCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNA--------DHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~--------~~~v~~~~~Dl~d~~~l~~   90 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+....      ...        ..++.++.+|++|.+++.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAG-----EGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            457999999999999999999999     899999999974321      100        1467899999999988877


Q ss_pred             HHccC--------CCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC--CC-cceEEEecCCccccccc
Q 015961           91 KLSQL--------TDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PN-LRHVCLQTGTKHYLGPF  153 (397)
Q Consensus        91 ~~~~~--------~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~-~~~~~~~s~~~~y~ss~  153 (397)
                      +++.+        |.|+|+|+.....      .++....+++|+.|+.++++++.+..  .+ ..+|+++||...+.   
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---  157 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV---  157 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH---
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc---
Confidence            77653        7789987753221      11456778999999999999887641  11 35788777543221   


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH
Q 015961          154 EAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA  226 (397)
Q Consensus       154 ~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  226 (397)
                         +.               + ....|+..|.     ...+.  ....|++++++||+.++++....   ....+   . 
T Consensus       158 ---~~---------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~---~-  211 (264)
T 2pd6_A          158 ---GN---------------V-GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK---VPQKV---V-  211 (264)
T ss_dssp             ---CC---------------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------------
T ss_pred             ---CC---------------C-CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh---cCHHH---H-
Confidence               10               0 1223664333     22222  13468999999999999942111   00000   0 


Q ss_pred             Hhhh-cCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeehHH
Q 015961          227 VCKH-EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKH  286 (397)
Q Consensus       227 i~~~-~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~~e  286 (397)
                       .+. ...|+            ....+.+++|.++++++...  ...|+.+++.+|...+...
T Consensus       212 -~~~~~~~~~------------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          212 -DKITEMIPM------------GHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             --CTGGGCTT------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             -HHHHHhCCC------------CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence             000 01110            11234556677777776542  3458899999887665543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.66  E-value=5.5e-16  Score=141.69  Aligned_cols=231  Identities=14%  Similarity=0.104  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------C-CCCCCceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+....         . .....+.++.+|++|++++.++++ 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVA-----AGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321         0 011267899999999988777665 


Q ss_pred             ------cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCC
Q 015961           94 ------QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                            .+|.++|+|+......       ++.+..+++|+.|+.++++++....  .+-.+|+++||...+...      
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  158 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH------  158 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC------
Confidence                  4677889877422111       1346678999999999999876541  123477877754333110      


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                                     + ....|+..|     +...+.  ....|+++..++|+.|.++-....... ...  ......  
T Consensus       159 ---------------~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~--~~~~~~--  217 (281)
T 3svt_A          159 ---------------R-WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-AEL--SSDYAM--  217 (281)
T ss_dssp             ---------------T-TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-HHH--HHHHHH--
T ss_pred             ---------------C-CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-HHH--HHHHHh--
Confidence                           0 012265422     222221  134679999999999988311100000 000  000111  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee-hHHHHHHHHHHhCCCC
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK-WKHLWKVLAEQFGIED  299 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s-~~el~~~i~~~~g~~~  299 (397)
                      ..|+.            ...+..++|.++++++...  ...|++|++.+|...+ ..|+...+.+.+|.+.
T Consensus       218 ~~p~~------------r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          218 CTPLP------------RQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             HCSSS------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             cCCCC------------CCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            11211            1223555678877777543  2358999999888876 8899999999998753

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.66  E-value=2.4e-16  Score=140.93  Aligned_cols=213  Identities=11%  Similarity=0.055  Sum_probs=132.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHcc---CCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQ---LTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V   98 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...  . ....+++++.+|++|.+++.++++.   +|.|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHA-----SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            357999999999999999999998     899999999975321  0 0113678889999999999998874   5778


Q ss_pred             eEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC--CC-cceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PN-LRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        99 ~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~-~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      +|+|+.....      .++.+..+++|+.++.++++++.+..  .+ ..+|+++||...|..            .     
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~-----  143 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT------------F-----  143 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC------------C-----
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC------------C-----
Confidence            8887643211      11446678999999999998886541  12 467888875433311            0     


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          170 MPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       170 ~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                          + ....|+.     +.+...+..  ...++++.++||+.++++....... ...+.  ..+.+  +.|+       
T Consensus       144 ----~-~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~--~~~~~--~~~~-------  206 (244)
T 1cyd_A          144 ----P-NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA-DPEFA--RKLKE--RHPL-------  206 (244)
T ss_dssp             ----T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC-CHHHH--HHHHH--HSTT-------
T ss_pred             ----C-CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc-CHHHH--HHHHh--cCCc-------
Confidence                0 1122554     333333221  2368999999999999842110000 00110  00111  1121       


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                        ..+   .+++++|+++++++..+  ...|+.+++.++..
T Consensus       207 --~~~---~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          207 --RKF---AEVEDVVNSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             --SSC---BCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             --cCC---CCHHHHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence              122   34455688887777543  23578888877643

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.66  E-value=1.4e-15  Score=137.19  Aligned_cols=213  Identities=15%  Similarity=0.079  Sum_probs=131.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.+++.++++    
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAE-----AGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999     899999999975321      0 012468899999999998877765    


Q ss_pred             ---cCCCeeEEEEecc-c-C-C--C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTW-T-N-R--S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~-~-~-~--~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.|+|+|+... . . .  +  .....+++|+.++.++++++...  ..+..+++++||...+.           
T Consensus        87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  155 (260)
T 3awd_A           87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLI-----------  155 (260)
T ss_dssp             HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcc-----------
Confidence               5788999887433 1 1 1  1  34667899999999999887653  11256777776532211           


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH-----HHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~i~~~~~~  233 (397)
                       ..      +..+  ...|+..|     +...+..  ...|++++++||+.|+++  ....... ..+  ...+.+  +.
T Consensus       156 -~~------~~~~--~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~--~~~~~~~~~~~--~~~~~~--~~  220 (260)
T 3awd_A          156 -VN------RPQQ--QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETT--LTRFGMEKPEL--YDAWIA--GT  220 (260)
T ss_dssp             -CC------SSSC--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT--TTHHHHTCHHH--HHHHHH--TC
T ss_pred             -cC------CCCC--ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccc--hhhcccCChHH--HHHHHh--cC
Confidence             00      1111  12366433     3332221  236899999999999993  2210110 011  000111  22


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      |+.         .   ..+..++|.++++++...  ...|++|++.+|.
T Consensus       221 ~~~---------~---~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          221 PMG---------R---VGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             TTS---------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcC---------C---CCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            210         1   223455677777776542  3458899998764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=4.5e-16  Score=143.84  Aligned_cols=216  Identities=10%  Similarity=0.015  Sum_probs=132.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C------CCCCCceEEEccCCCHHHHHHH
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W------NADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~------~~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      ..+|+||||||+|+||++++++|++     +|++|++++|+....      .      ....++.++.+|++|.+++..+
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~   90 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLE-----LGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   90 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence            4468999999999999999999999     899999999974311      0      0124688999999999988777


Q ss_pred             Hcc-------CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCcccccccccc
Q 015961           92 LSQ-------LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        92 ~~~-------~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                      ++.       +|.|+|+|+.....      .++....+++|+.|+.++++++....  ....+++++||.. +      +
T Consensus        91 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~------~  163 (303)
T 1yxm_A           91 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-K------A  163 (303)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-T------T
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-c------c
Confidence            754       78899988743211      11346678999999999999876521  1135677776432 1      1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeeccCC-CcchhHHHHHHHHHH
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPY-SLMNLVGALCVYAAV  227 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~i  227 (397)
                      +      .         +. ...|+.        .+.+++.+ ...|++++++||+.|+|+... .........      
T Consensus       164 ~------~---------~~-~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~------  220 (303)
T 1yxm_A          164 G------F---------PL-AVHSGAARAGVYNLTKSLALEW-ACSGIRINCVAPGVIYSQTAVENYGSWGQSF------  220 (303)
T ss_dssp             C------C---------TT-CHHHHHHHHHHHHHHHHHHHHT-GGGTEEEEEEEECSBCCTGGGTTSGGGGGGG------
T ss_pred             C------C---------Cc-chhhHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCCcccchhhhhccccchHH------
Confidence            1      0         11 112443        23333332 345899999999999994211 111000000      


Q ss_pred             hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeeh
Q 015961          228 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  284 (397)
Q Consensus       228 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~  284 (397)
                      ......  ..+        .....+..++|.++++++...  ...|+.+++.+|...+.
T Consensus       221 ~~~~~~--~~p--------~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          221 FEGSFQ--KIP--------AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             GTTGGG--GST--------TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             HHHHHh--cCc--------ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeeccc
Confidence            000000  001        011234455677877776542  24588999998765543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.66  E-value=2.6e-16  Score=136.99  Aligned_cols=150  Identities=18%  Similarity=0.082  Sum_probs=106.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--C-CCCCceEEEccCCCHHHHHHHHc---cCCCeeE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N-ADHLVEYVQCDVSDPEETQAKLS---QLTDVTH  100 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~-~~~~v~~~~~Dl~d~~~l~~~~~---~~~~V~h  100 (397)
                      |+||||||+|+||++++++|++     +  +|++++|++....  . .... +++.+|++|++++.++++   ++|.|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~-----~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKG-----H--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTT-----S--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHh-----C--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence            5799999999999999999998     6  8999999753210  0 0011 788999999999988887   7888999


Q ss_pred             EEEeccc------CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961          101 IFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus       101 ~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      +|+....      ..++....+++|+.++.++++++++.  +..+|+++||...|...                     +
T Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~sS~~~~~~~---------------------~  129 (207)
T 2yut_A           73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ--KGARAVFFGAYPRYVQV---------------------P  129 (207)
T ss_dssp             CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE--EEEEEEEECCCHHHHSS---------------------T
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc--CCcEEEEEcChhhccCC---------------------C
Confidence            8775322      11256778899999999999999654  36788888865443210                     0


Q ss_pred             CCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961          175 APNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       175 ~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                       +...|+.     +.+...+..  ...|++++++||+.+++
T Consensus       130 -~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t  169 (207)
T 2yut_A          130 -GFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVAT  169 (207)
T ss_dssp             -TBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCS
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccC
Confidence             1222554     333333221  23689999999999998

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.65  E-value=1.8e-15  Score=136.94  Aligned_cols=215  Identities=14%  Similarity=0.054  Sum_probs=133.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-C-CCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-A-DHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~-~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|+||||||+|+||++++++|++     +|++|++++|+....      .. . ..++.++.+|++|++++.++++    
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAK-----EGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999     899999999975321      00 0 2467889999999998877775    


Q ss_pred             ---cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         ++|.++|+|+.....      .++.+..+++|+.++.++++++...  ..+..+++++||...|..           
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  150 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP-----------  150 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-----------
Confidence               678899988753221      1145667899999999998887542  112567888775433311           


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHH--------HHHHH-H
Q 015961          163 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGA--------LCVYA-A  226 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~--------~~~~~-~  226 (397)
                       .         + ....|+..|.     ...+.  ....|+++.++||+.|+++...   .....        ...+. .
T Consensus       151 -~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~  216 (263)
T 3ai3_A          151 -L---------W-YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI---KTAKELTKDNGGDWKGYLQS  216 (263)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH---HHHHHHTTTTTCCHHHHHHH
T ss_pred             -C---------C-CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh---hhhHhhhcccCCcHHHHHHH
Confidence             0         1 1122554322     22221  1346899999999999983210   00000        00000 0


Q ss_pred             HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeee
Q 015961          227 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK  283 (397)
Q Consensus       227 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s  283 (397)
                      +... ..|            .....+..++|.++++++..+.  ..|++|++.+|...|
T Consensus       217 ~~~~-~~p------------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          217 VADE-HAP------------IKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHHH-HCT------------TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HHhc-CCC------------CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            0010 011            1123355666888888775433  358899999876654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.64  E-value=1.7e-16  Score=143.32  Aligned_cols=223  Identities=16%  Similarity=0.089  Sum_probs=133.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+.....    .....+.++.+|++|++++.++++       
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVR-----EGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999     8999999999753210    012467899999999998877776       


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      ++|.++|+|+......      ++.+..+++|+.|+.++++++....   ..-.+++++||...+.      +      .
T Consensus        82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------~  149 (259)
T 4e6p_A           82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR------G------E  149 (259)
T ss_dssp             SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------C------C
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc------C------C
Confidence            6788999877532211      1456678899999999999886541   1134677776533221      1      0


Q ss_pred             CCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc-CCCce
Q 015961          165 PFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE-GIPLR  236 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~-~~~~~  236 (397)
                               + ....|+..|     +...+.  ....|+++..++|+.|++  +... . ...+  +....... +....
T Consensus       150 ---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t--~~~~-~-~~~~--~~~~~~~~~~~~~~  213 (259)
T 4e6p_A          150 ---------A-LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDG--EHWD-G-VDAL--FARYENRPRGEKKR  213 (259)
T ss_dssp             ---------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCS--TTHH-H-HHHH--HHHHHTCCTTHHHH
T ss_pred             ---------C-CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCcc--chhh-h-hhhh--hhhhccCChHHHHH
Confidence                     1 112265432     222221  134589999999999998  3210 0 0000  00000000 00000


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee
Q 015961          237 FPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  283 (397)
Q Consensus       237 ~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s  283 (397)
                      ..+.......+   .+..++|.++++++...  ...|++|++.+|..+|
T Consensus       214 ~~~~~~p~~r~---~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          214 LVGEAVPFGRM---GTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHHSTTSSC---BCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHhccCCCCCC---cCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            01111111223   34455577777766432  2458999999876543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.64  E-value=8.5e-16  Score=133.25  Aligned_cols=143  Identities=13%  Similarity=0.104  Sum_probs=100.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc---CCCeeEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTHIFY  103 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V~h~a~  103 (397)
                      ++||||||+|+||++++++|+ .     |++|++++|++.          .+.+|++|+++++++++.   +|.|+|+|+
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~-----g~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-K-----KAEVITAGRHSG----------DVTVDITNIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-T-----TSEEEEEESSSS----------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-C-----CCeEEEEecCcc----------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence            379999999999999999998 3     789999999743          468999999998888876   677888876


Q ss_pred             ecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 015961          104 VTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  177 (397)
Q Consensus       104 ~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~  177 (397)
                      ......      +.....+++|+.++.++++++.+...+-.+++++||...+       .       +      . + ..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~-------~-------~------~-~-~~  125 (202)
T 3d7l_A           68 SATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMME-------D-------P------I-V-QG  125 (202)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGT-------S-------C------C-T-TC
T ss_pred             CCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhc-------C-------C------C-C-cc
Confidence            432111      1335667899999999999998752112577777643211       1       0      0 1 11


Q ss_pred             cchhH-----HHHHHHHHhcC--CCeeEEEEcCCceee
Q 015961          178 FYYTL-----EDILFEEVEKK--EELSWSVHRPDTIFG  208 (397)
Q Consensus       178 ~~y~~-----e~~l~~~~~~~--~g~~~~ilRp~~v~G  208 (397)
                      ..|+.     +.+...+. .+  .|++++++||+.+++
T Consensus       126 ~~Y~~sK~~~~~~~~~~~-~e~~~gi~v~~v~pg~v~~  162 (202)
T 3d7l_A          126 ASAAMANGAVTAFAKSAA-IEMPRGIRINTVSPNVLEE  162 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TSCSTTCEEEEEEECCBGG
T ss_pred             HHHHHHHHHHHHHHHHHH-HHccCCeEEEEEecCccCC
Confidence            22554     44444432 33  489999999999998

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.64  E-value=4.9e-16  Score=140.04  Aligned_cols=211  Identities=15%  Similarity=0.119  Sum_probs=130.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC-CCCCC-------CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR-PKPNW-------NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~-~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+ +....       ....++.++.+|++|++++.++++   
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFAR-----AGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            457999999999999999999999     89999999998 43210       012367899999999998888776   


Q ss_pred             ----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc----C---CCcceEEEecCCccccccccc
Q 015961           94 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN----A---PNLRHVCLQTGTKHYLGPFEA  155 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~----~---~~~~~~~~~s~~~~y~ss~~~  155 (397)
                          ++|.|+|+|+......       +.....+++|+.++.++++++...    +   ....+++++||...+..    
T Consensus        81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----  156 (258)
T 3afn_B           81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----  156 (258)
T ss_dssp             HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----
T ss_pred             HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----
Confidence                7888999987411111       134567899999999998877542    1   11267777765332210    


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHh
Q 015961          156 FGKIKPYDPPFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC  228 (397)
Q Consensus       156 ~g~~~~~~~~~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~  228 (397)
                       +               .+ ....|+..     .+...+.  ....|++++++||+.++++......   ..+..  .+.
T Consensus       157 -~---------------~~-~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~--~~~  214 (258)
T 3afn_B          157 -G---------------GP-GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT---QDVRD--RIS  214 (258)
T ss_dssp             -C---------------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC---HHHHH--HHH
T ss_pred             -C---------------CC-CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC---HHHHH--HHh
Confidence             0               01 11225543     3332222  1345899999999999994322111   11100  011


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC---CCCCCceeccCCC
Q 015961          229 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP---YAKNEAFNCNNGD  280 (397)
Q Consensus       229 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~---~~~g~~yni~~~~  280 (397)
                      +  +.|+         ..+.++.|+   |.++++++..+   ...|++|++.++.
T Consensus       215 ~--~~~~---------~~~~~~~dv---a~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          215 N--GIPM---------GRFGTAEEM---APAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             T--TCTT---------CSCBCGGGT---HHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             c--cCCC---------CcCCCHHHH---HHHHHHHhCcchhccccCCEEeECCCc
Confidence            1  2221         123344444   66666665432   3358899998764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.63  E-value=2.7e-15  Score=134.60  Aligned_cols=211  Identities=15%  Similarity=0.084  Sum_probs=129.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...      .....++.++.+|++|.+++.++++.    
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVE-----EGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999     899999999975321      11114688999999999888777654    


Q ss_pred             ---CCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEecCCccccccccccCCCCCC
Q 015961           95 ---LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ---~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         +|.|+|+|+.....    .  +.....+++|+.++.++.+++...  ..+. .+|+++||...|..           
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  148 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-----------  148 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-----------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC-----------
Confidence               78899987753221    1  134667899999887766655432  1224 68888875432211           


Q ss_pred             CCCCCCCCCCCCCCCcchhHHH-----HHHHHHh--c--CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          163 DPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--K--KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~--~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                       .         + ....|+..|     +...+..  .  ..+++++++||+.++++......   ...  .   ......
T Consensus       149 -~---------~-~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~---~~~--~---~~~~~~  209 (251)
T 1zk4_A          149 -D---------P-SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP---GAE--E---AMSQRT  209 (251)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST---THH--H---HHTSTT
T ss_pred             -C---------C-CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC---chh--h---hHHHhh
Confidence             0         1 112365433     2222211  1  67899999999999984211110   000  0   010111


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      ..  +     .   ....+.+++|..+++++..+  ...|+++++.+|.
T Consensus       210 ~~--~-----~---~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          210 KT--P-----M---GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             TC--T-----T---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cC--C-----C---CCCcCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            00  1     0   11234556688877777543  2458899998764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.63  E-value=7e-15  Score=132.53  Aligned_cols=213  Identities=12%  Similarity=0.088  Sum_probs=132.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC----CCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----ADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|++|||||+|+||++++++|++     +|++|++++|+......    ...++.++.+|++|.+++.++++       
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQ-----EGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999     89999999997643211    12367899999999988877765       


Q ss_pred             cCCCeeEEEEecccC----------CCcHHHHHHhHHHHHHHHHHHHccc-C-------CCcceEEEecCCccccccccc
Q 015961           94 QLTDVTHIFYVTWTN----------RSTEAENCKINGSMFRNVLRAVIPN-A-------PNLRHVCLQTGTKHYLGPFEA  155 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~----------~~~~~~~~~~nv~gt~~ll~a~~~~-~-------~~~~~~~~~s~~~~y~ss~~~  155 (397)
                      .+|.++|.|+.....          .++.+..+++|+.|+.++++++... .       .+..+++++||...+...   
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~---  157 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ---  157 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC---
Confidence            678888987753211          1245667899999999999988754 1       134568877754433110   


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcchhHHH-----H---HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHH
Q 015961          156 FGKIKPYDPPFTEDMPRLDAPNFYYTLED-----I---LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAV  227 (397)
Q Consensus       156 ~g~~~~~~~~~~E~~p~~~~~~~~y~~e~-----~---l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i  227 (397)
                                        + ....|+..|     +   ++... ...|+++..++|+.|.++-....   ....      
T Consensus       158 ------------------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~t~~~~~~---~~~~------  208 (257)
T 3tpc_A          158 ------------------I-GQAAYAASKGGVAALTLPAAREL-ARFGIRVVTIAPGIFDTPMMAGM---PQDV------  208 (257)
T ss_dssp             ------------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBSCC------------------
T ss_pred             ------------------C-CCcchHHHHHHHHHHHHHHHHHH-HHcCeEEEEEEeCCCCChhhccC---CHHH------
Confidence                              0 112265433     2   22222 34689999999999988311110   0000      


Q ss_pred             hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeee
Q 015961          228 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFK  283 (397)
Q Consensus       228 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s  283 (397)
                      .+......+.++         ......++|.++++++......|+++++.+|..++
T Consensus       209 ~~~~~~~~p~~~---------r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          209 QDALAASVPFPP---------RLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             -----CCSSSSC---------SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHhcCCCCC---------CCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            010111111111         22345556788888776656678999998876543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.63  E-value=2.8e-15  Score=134.69  Aligned_cols=203  Identities=9%  Similarity=-0.007  Sum_probs=128.4

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc------
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ------   94 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~------   94 (397)
                      ..+.|+|+||||||+|+||++++++|++     +|++|++++|+....     .-..+.+|++|.+++.++++.      
T Consensus        17 ~~~~m~k~vlITGas~gIG~~la~~l~~-----~G~~V~~~~r~~~~~-----~~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           17 RGSHMSKNILVLGGSGALGAEVVKFFKS-----KSWNTISIDFRENPN-----ADHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCTT-----SSEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCcccc-----cccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            3466889999999999999999999999     899999999986542     224678999999888777654      


Q ss_pred             -CCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           95 -LTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        95 -~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                       +|.++|+|+.....   .+    +....+++|+.|+.++++++.....+-.+|+++||...+.      +      .  
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~------~--  152 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN------R------T--  152 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------C------C--
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc------C------C--
Confidence             35677776642211   11    4466789999999999998876421124677776533221      1      0  


Q ss_pred             CCCCCCCCCCCcchhHHH-----HHHHHHhc----CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          167 TEDMPRLDAPNFYYTLED-----ILFEEVEK----KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~e~-----~l~~~~~~----~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                             + ....|+..|     +...+..+    ..++++.+++|+.|..+       +...+      .  ...+   
T Consensus       153 -------~-~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~-------~~~~~------~--~~~~---  206 (251)
T 3orf_A          153 -------S-GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP-------TNRKY------M--SDAN---  206 (251)
T ss_dssp             -------T-TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH-------HHHHH------C--TTSC---
T ss_pred             -------C-CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc-------chhhh------c--cccc---
Confidence                   1 122366433     33333212    36799999999988772       01111      0  0111   


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcC---CCCCCCceeccCCCee
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVD---PYAKNEAFNCNNGDVF  282 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~---~~~~g~~yni~~~~~~  282 (397)
                            .   ....+..++|..+++++..   ....|+++++.+++..
T Consensus       207 ------~---~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          207 ------F---DDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             ------G---GGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             ------c---cccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence                  1   1223456668888887766   3456889998876543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.63  E-value=2.6e-15  Score=134.51  Aligned_cols=211  Identities=17%  Similarity=0.111  Sum_probs=132.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .|+|++|||||+|+||++++++|++     +|++|++++|+....       . ....++.++.+|++|.++++++++  
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   76 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAE-----EGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEV   76 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            3568999999999999999999999     899999988854211       0 012467889999999998877765  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           .+|.++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+++++||...+.      +.  
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~~--  148 (246)
T 3osu_A           77 VSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV------GN--  148 (246)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------CC--
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC------CC--
Confidence                 6788999887543211      144668899999999999988432  11246778777533221      10  


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                   + ....|+..|.     ...+.  ....|+++..++|+.|.++-......   ....  .+.  ...
T Consensus       149 -------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~--~~~--~~~  207 (246)
T 3osu_A          149 -------------P-GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD---ELKE--QML--TQI  207 (246)
T ss_dssp             -------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH---HHHH--HHH--TTC
T ss_pred             -------------C-CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH---HHHH--HHH--hcC
Confidence                         0 1122664332     22211  13568999999999999842222111   1100  011  122


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  280 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~  280 (397)
                      |+.            ...+..++|.++++++..+.  ..|++|++.+|.
T Consensus       208 p~~------------r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          208 PLA------------RFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             TTC------------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             CCC------------CCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            211            12234456777777765433  348999998764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.63  E-value=7.3e-16  Score=138.07  Aligned_cols=209  Identities=14%  Similarity=0.085  Sum_probs=129.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|++...      ..  ...++.++.+|++|.+++.++++   
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLAS-----AGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY   80 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            357899999999999999999998     899999999975321      00  02467889999999998888776   


Q ss_pred             ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          ++|.|+|+|+.....      .++....+++|+.++.++++++.+.  ..+..+++++||...+      ++.   
T Consensus        81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~~---  151 (248)
T 2pnf_A           81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGF------TGN---  151 (248)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHH------HCC---
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhc------CCC---
Confidence                678899987753221      1145677899999998777766542  1135788888753322      110   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (397)
                                  + ....|+..|     +...+.  ....+++++++||+.++++......   ..+..  ....  ..|
T Consensus       152 ------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~---~~~~~--~~~~--~~~  211 (248)
T 2pnf_A          152 ------------V-GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS---EEIKQ--KYKE--QIP  211 (248)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHH--HHHH--TCT
T ss_pred             ------------C-CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc---HHHHH--HHHh--cCC
Confidence                        0 011255422     222221  1345899999999999984221111   11100  0111  112


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCC
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNG  279 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~  279 (397)
                      .      .   .+   .+..++|.++++++...  ...|++|++.+|
T Consensus       212 ~------~---~~---~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          212 L------G---RF---GSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             T------S---SC---BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C------C---Cc---cCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            1      1   12   23455577777776542  345889999876

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.62  E-value=9.1e-16  Score=137.17  Aligned_cols=213  Identities=12%  Similarity=0.040  Sum_probs=132.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHcc---CCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQ---LTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V   98 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....  . ...++++++.+|++|.+++.++++.   +|.|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHA-----TGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence            357899999999999999999998     899999999975321  0 0113577889999999999988864   5778


Q ss_pred             eEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        99 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      +|+|+......      +..+..+++|+.++.++++++.+.   .....+++++||...+.       .     .     
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------~-----~-----  143 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-------A-----V-----  143 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-------C-----C-----
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-------C-----C-----
Confidence            88876432211      134668899999999998887653   11146788777533221       0     0     


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          170 MPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       170 ~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                          + ....|+.     +.+...+..  ...++++.++||+.|+++.............   .+.+  ..|.       
T Consensus       144 ----~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~--~~~~-------  206 (244)
T 3d3w_A          144 ----T-NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAK---TMLN--RIPL-------  206 (244)
T ss_dssp             ----T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHH---HHHH--TCTT-------
T ss_pred             ----C-CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHH---HHHh--hCCC-------
Confidence                1 1223664     333333221  2358999999999999831110000000000   0011  1121       


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                           ....+.+++|.++++++...  ...|+.|++.+|..
T Consensus       207 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          207 -----GKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             -----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -----CCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence                 12234555688888777543  34588999987643

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.62  E-value=3.4e-15  Score=135.07  Aligned_cols=165  Identities=12%  Similarity=0.055  Sum_probs=108.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+.....        ....++.++.+|++|.+++.++++.  
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAA-----AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHH-----TTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            357899999999999999999999     8999999999654310        0024688999999999988776654  


Q ss_pred             -----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCC
Q 015961           95 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        95 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           +|.|+|+|+.....      .++....+++|+.++.++++++....   ....+|+++||...+...        
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  159 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN--------  159 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc--------
Confidence                 55577776543211      11345678999999999999886541   123678888764433211        


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                        ..   ...+..+  ...|+..|     +...+.  ....|++++++||+.|+++
T Consensus       160 --~~---~~~~~~~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  208 (265)
T 1h5q_A          160 --QS---SLNGSLT--QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD  208 (265)
T ss_dssp             --EE---ETTEECS--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred             --cc---ccccccc--ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccc
Confidence              00   0011111  22365433     332222  1345899999999999984

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.62  E-value=1.1e-15  Score=137.54  Aligned_cols=215  Identities=16%  Similarity=0.116  Sum_probs=114.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+....      . .....+.++.+|++|++++.++++    
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAR-----EGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 012467899999999988877765    


Q ss_pred             ---cCCCeeEEEEecc---c------CCCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961           94 ---QLTDVTHIFYVTW---T------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ---~~~~V~h~a~~~~---~------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                         .+|.++|+|+...   .      ..++....+++|+.++.++.+++...  ..+..+|+++||...|...       
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  155 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS-------  155 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC-------
Confidence               6788999876521   0      11144677899999976666655432  1124677877754333100       


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                                   ........+.+.+...+..  ...|+++..++|+.|.++......  ...+..  .+.+  +.|+  
T Consensus       156 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~--~~~~--~~~~--  214 (253)
T 3qiv_A          156 -------------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--PKEMVD--DIVK--GLPL--  214 (253)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--cHHHHH--HHhc--cCCC--
Confidence                         0111111223433333321  345899999999999984211100  000000  0000  1111  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  282 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~  282 (397)
                             ..+.++   +++|.++++++...  ...|++|++.+|..+
T Consensus       215 -------~~~~~~---~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          215 -------SRMGTP---DDLVGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             ------------C---CHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             -------CCCCCH---HHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence                   112233   34477777766432  346899999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.62  E-value=1.6e-15  Score=137.34  Aligned_cols=158  Identities=13%  Similarity=0.069  Sum_probs=103.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHH-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL-----   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~-----   92 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.+++.+++     
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAG-----FGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            357999999999999999999999     899999999975321      0 01236788999999998877766     


Q ss_pred             ---ccCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           93 ---SQLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        93 ---~~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         ..+|.|+|+|+.....      .++....+++|+.++.++++++...  ..+..+++++||...+..          
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------  157 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS----------  157 (266)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC----------
Confidence               4578899987743211      1145667899999999999988432  112567887775332210          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                        .         + ....|+..|     +...+.  ....|++++++||+.++++
T Consensus       158 --~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  200 (266)
T 1xq1_A          158 --A---------S-VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP  200 (266)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--
T ss_pred             --C---------C-CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccc
Confidence              0         0 112255432     222221  1345899999999999994

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.62  E-value=1.5e-15  Score=136.31  Aligned_cols=215  Identities=14%  Similarity=0.064  Sum_probs=130.0

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+.+..+|+||||||+|+||++++++|++     .|++|++++|+.....    .....+.++.+|++|.+++.++++  
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   82 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHK-----LGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT   82 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc
Confidence            44455678999999999999999999998     8999999999753210    011467899999999999988887  


Q ss_pred             -cCCCeeEEEEeccc------CCCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.++|+|+....      ..++....+++|+.++.++++++...  ..+..+|+++||...+..            .
T Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------~  150 (249)
T 3f9i_A           83 SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG------------N  150 (249)
T ss_dssp             SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C------------C
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC------------C
Confidence             46678888764331      11256778999999999998877543  112457887775332211            0


Q ss_pred             CCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                               + ....|+..|.     ...+.  ....|+++.+++|+.|.++-.......  ....   ...  ..++  
T Consensus       151 ---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~---~~~--~~~~--  211 (249)
T 3f9i_A          151 ---------P-GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEK--QREA---IVQ--KIPL--  211 (249)
T ss_dssp             ---------S-CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHH--HHHH---HHH--HCTT--
T ss_pred             ---------C-CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHH--HHHH---HHh--cCCC--
Confidence                     1 1223664333     22221  134689999999999988321111110  0100   011  1111  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  280 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~  280 (397)
                             ..+   .+..++|.++++++....  ..|++|++.+|.
T Consensus       212 -------~~~---~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          212 -------GTY---GIPEDVAYAVAFLASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             -------CSC---BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             -------CCC---cCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence                   012   234455777777765432  358999998765

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.62  E-value=7.9e-16  Score=139.59  Aligned_cols=222  Identities=16%  Similarity=0.087  Sum_probs=135.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+....      .   ....++.++.+|++|++++.++++. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLL-----KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV   80 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHH
Confidence            357999999999999999999999     899999999975321      0   0123578899999999888776654 


Q ss_pred             ------CCCeeEEEEecccCCCcHHHHHHhHHHHHH----HHHHHHcccC-CCcceEEEecCCccccccccccCCCCCCC
Q 015961           95 ------LTDVTHIFYVTWTNRSTEAENCKINGSMFR----NVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        95 ------~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~----~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                            +|.++|+|+..  ..++.+..+++|+.++.    +++..+++.+ .+..+++++||...+..            
T Consensus        81 ~~~~g~id~lv~~Ag~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  146 (267)
T 2gdz_A           81 VDHFGRLDILVNNAGVN--NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP------------  146 (267)
T ss_dssp             HHHHSCCCEEEECCCCC--CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC------------
T ss_pred             HHHcCCCCEEEECCCCC--ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC------------
Confidence                  57788886532  23467788899988654    4555554432 12567888775432211            


Q ss_pred             CCCCCCCCCCCCCCcchhHHH-----HHHH-----HHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          164 PPFTEDMPRLDAPNFYYTLED-----ILFE-----EVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~-----~l~~-----~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                      .         + ....|+..|     +...     .. ...|+++.+++|+.|.++-...... ......+....+....
T Consensus       147 ~---------~-~~~~Y~~sK~a~~~~~~~~ala~e~-~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~  214 (267)
T 2gdz_A          147 V---------A-QQPVYCASKHGIVGFTRSAALAANL-MNSGVRLNAICPGFVNTAILESIEK-EENMGQYIEYKDHIKD  214 (267)
T ss_dssp             C---------T-TCHHHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEEESCBSSHHHHGGGC-HHHHGGGGGGHHHHHH
T ss_pred             C---------C-CCchHHHHHHHHHHHHHHHHHHHHh-ccCCcEEEEEecCcCcchhhhcccc-ccccchhhhHHHHHHH
Confidence            0         1 111255432     2221     11 4578999999999998731000000 0000000000000000


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHH
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHL  287 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el  287 (397)
                      ++          ......+..++|.++++++..+...|+++++.++...++.|+
T Consensus       215 ~~----------~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          215 MI----------KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HH----------HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred             Hh----------ccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence            00          001123456668888888776667799999999998888754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.62  E-value=1.7e-15  Score=135.65  Aligned_cols=209  Identities=14%  Similarity=0.068  Sum_probs=123.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|+||||||+|+||++++++|++     +|++|++++ |++...      . ....++.++.+|++|++++.++++    
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~-----~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGN-----MGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD   79 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999     899999994 543211      0 012468899999999998877765    


Q ss_pred             ---cCCCeeEEEEeccc------CCCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         ++|.|+|+|+....      ..++....+++|+.++.++++++...  ..+..+++++||...      .++.    
T Consensus        80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------~~~~----  149 (247)
T 2hq1_A           80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAG------IIGN----  149 (247)
T ss_dssp             HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh------ccCC----
Confidence               67889999875421      11245678899999998888877643  113567887775321      1221    


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          163 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                                 + ....|+..|.     ...+.  ....++++.+++|+.+.++-.....   ....  ..+.  .+.|+
T Consensus       150 -----------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~--~~~~--~~~~~  210 (247)
T 2hq1_A          150 -----------A-GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP---DKVK--EMYL--NNIPL  210 (247)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHH--HHHH--TTSTT
T ss_pred             -----------C-CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc---hHHH--HHHH--hhCCC
Confidence                       0 1122554332     22221  1345899999999998873111110   0010  0001  11121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                               ..   ..+.+++|.++++++..+  ...|++||+.+|.
T Consensus       211 ---------~~---~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          211 ---------KR---FGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             ---------SS---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ---------CC---CCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence                     11   224455677777766543  2458899998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.61  E-value=1e-14  Score=133.58  Aligned_cols=169  Identities=14%  Similarity=0.050  Sum_probs=113.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceEEEccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSD   84 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d   84 (397)
                      ..+|+||||||+|+||.+++++|++     +|++|++++|+.....                   ....++.++.+|++|
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAE-----EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD   82 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHH-----CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC
Confidence            3468999999999999999999999     8999999998632110                   012467899999999


Q ss_pred             HHHHHHHHc-------cCCCeeEEEEecccC----CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccc
Q 015961           85 PEETQAKLS-------QLTDVTHIFYVTWTN----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPF  153 (397)
Q Consensus        85 ~~~l~~~~~-------~~~~V~h~a~~~~~~----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~  153 (397)
                      .+++.++++       .+|.++|.|+.....    .++.+..+++|+.|+.++++++.....+-.+++++||...+.+..
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  162 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA  162 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc
Confidence            988877665       678899988754322    225677899999999999999987633345788887655443210


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeec
Q 015961          154 EAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       154 ~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                               ..+..+..+. + ....|+..|.        ++..+ ...|+++..++|+.|..+
T Consensus       163 ---------~~~~~~~~~~-~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~  214 (287)
T 3pxx_A          163 ---------QPPGAGGPQG-P-GGAGYSYAKQLVDSYTLQLAAQL-APQSIRANVIHPTNVNTD  214 (287)
T ss_dssp             ---------CCC-----CH-H-HHHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEESSBSST
T ss_pred             ---------ccccccccCC-C-ccchHHHHHHHHHHHHHHHHHHH-hhcCcEEEEEecCccccc
Confidence                     1122222211 1 1123554322        22222 345899999999999883

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.61  E-value=9.7e-15  Score=131.05  Aligned_cols=155  Identities=10%  Similarity=-0.034  Sum_probs=105.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~   97 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+.....   .++.++.+|++|.+++.++++       ++|.
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVE-----AGAKVTGFDQAFTQEQ---YPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCCCSSC---CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCchhhhc---CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            357999999999999999999999     8999999999764321   237889999999998887775       5788


Q ss_pred             eeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        98 V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      ++|+|+.....      .++.+..+++|+.++.++++++...  ..+..+++++||...+..                  
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------------  139 (250)
T 2fwm_X           78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP------------------  139 (250)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC------------------
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC------------------
Confidence            89987753221      1145678899999999999988432  112467887775332210                  


Q ss_pred             CCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          170 MPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       170 ~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                         .+ ....|+..|.     ...+.  ....|+++.+++|+.+.++
T Consensus       140 ---~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  182 (250)
T 2fwm_X          140 ---RI-GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTD  182 (250)
T ss_dssp             ---CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred             ---CC-CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCc
Confidence               01 1123554322     22221  1345899999999999984

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.61  E-value=1.4e-14  Score=131.12  Aligned_cols=213  Identities=14%  Similarity=0.053  Sum_probs=134.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC----CCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----ADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+......    ...++.++.+|++|.+++.++++       
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVG-----QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            357999999999999999999999     89999999997643200    01368899999999998887776       


Q ss_pred             cCCCeeEEEEecccC------------CCcHHHHHHhHHHHHHHHHHHHccc--CC------CcceEEEecCCccccccc
Q 015961           94 QLTDVTHIFYVTWTN------------RSTEAENCKINGSMFRNVLRAVIPN--AP------NLRHVCLQTGTKHYLGPF  153 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~------------~~~~~~~~~~nv~gt~~ll~a~~~~--~~------~~~~~~~~s~~~~y~ss~  153 (397)
                      .+|.|+|+|+.....            .++....+++|+.++.++++++...  ..      +..+++++||...+... 
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-  164 (265)
T 2o23_A           86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-  164 (265)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-
T ss_pred             CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-
Confidence            688899987753221            1145677899999999999988754  11      35678888764433110 


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH
Q 015961          154 EAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA  226 (397)
Q Consensus       154 ~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  226 (397)
                                          + ....|+..|.     ...+.  ....++++.+++|+.|.++-...   ......  ..
T Consensus       165 --------------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~--~~  218 (265)
T 2o23_A          165 --------------------V-GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LPEKVC--NF  218 (265)
T ss_dssp             --------------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CH
T ss_pred             --------------------C-CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc---cCHHHH--HH
Confidence                                0 1123654332     22211  13468999999999998731111   000000  00


Q ss_pred             HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCee
Q 015961          227 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVF  282 (397)
Q Consensus       227 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~  282 (397)
                      +..  ..|  .++         ...+..++|..+++++..+...|+++++.+|...
T Consensus       219 ~~~--~~~--~~~---------~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          219 LAS--QVP--FPS---------RLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             HHH--TCS--SSC---------SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             HHH--cCC--CcC---------CCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            011  111  111         1234555677877777666667889999876543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.61  E-value=1.6e-14  Score=131.23  Aligned_cols=211  Identities=12%  Similarity=0.042  Sum_probs=132.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|.+++.++++       
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLAR-----AGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            458999999999999999999999     8999999999864320    002467899999999988877766       


Q ss_pred             cCCCeeEEEEeccc-CC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 QLTDVTHIFYVTWT-NR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 ~~~~V~h~a~~~~~-~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                      .+|.++|.|+.... ..       +..+..+++|+.|+.++++++...  ..+..+|+++||...+...           
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------  153 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY-----------  153 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC-----------
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC-----------
Confidence            67888898775422 11       134667899999999999988432  1235678877754322110           


Q ss_pred             CCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCce
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLR  236 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (397)
                                + ....|+..|.     ...+.  ....|+++..++|+.|+++....  ........  ....  ..++ 
T Consensus       154 ----------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~--~~~~--~~~~-  215 (271)
T 3tzq_B          154 ----------D-MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV--GLPQPIVD--IFAT--HHLA-  215 (271)
T ss_dssp             ----------S-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHH--HHHT--TSTT-
T ss_pred             ----------C-CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc--cCCHHHHH--HHHh--cCCC-
Confidence                      1 1122654322     22221  13468999999999999842211  11111100  0111  1121 


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          237 FPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       237 ~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                        +         ...+..++|.++++++...  ...|+++++.+|.
T Consensus       216 --~---------r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          216 --G---------RIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             --S---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             --C---------CCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence              1         1223455688888777543  3458999998873

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.60  E-value=3.9e-15  Score=134.43  Aligned_cols=215  Identities=14%  Similarity=0.056  Sum_probs=131.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ..+|+||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.+++..+++   
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   86 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQ-----DGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAV   86 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321      0 012367889999999988777665   


Q ss_pred             ----cCCCeeEEEEeccc--C---C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 ----QLTDVTHIFYVTWT--N---R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~--~---~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                          ++|.++|+|+....  .   .  ++.+..+++|+.++.++++++...  ..+..+|+++||...|..         
T Consensus        87 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  157 (260)
T 2zat_A           87 NLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP---------  157 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC---------
Confidence                67889998774321  1   1  134667899999999988887532  123578888875433311         


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHHHhhhcC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAAVCKHEG  232 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~i~~~~~  232 (397)
                         .         + ....|+..|     +...+.  ....|+++.+++|+.|..+  -...... .....  .+...  
T Consensus       158 ---~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~--~~~~~~~~~~~~~--~~~~~--  218 (260)
T 2zat_A          158 ---F---------P-NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTN--FSQVLWMDKARKE--YMKES--  218 (260)
T ss_dssp             ---C---------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS--TTHHHHSSHHHHH--HHHHH--
T ss_pred             ---C---------C-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCc--cchhcccChHHHH--HHHhc--
Confidence               0         1 112255422     222221  1345899999999999873  1100000 00000  00110  


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeee
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK  283 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s  283 (397)
                      .|         ...+.++.|+   |.++++++..+.  ..|++|++.+|...|
T Consensus       219 ~~---------~~~~~~~~dv---a~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          219 LR---------IRRLGNPEDC---AGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HT---------CSSCBCGGGG---HHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             CC---------CCCCCCHHHH---HHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            11         0123344444   666666664432  358899999887665

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.60  E-value=1.6e-15  Score=136.56  Aligned_cols=156  Identities=12%  Similarity=0.025  Sum_probs=107.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCC-------CCCCCCceEEEccCCCH-HHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN-------WNADHLVEYVQCDVSDP-EETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~-~~l~~~~~--   93 (397)
                      .+|+||||||+|+||.+++++|++     +|++ |++++|+....       .....++.++.+|++|. +++.++++  
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~-----~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVK-----RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHH-----CCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            357899999999999999999998     8996 99999975311       00123678899999998 77766654  


Q ss_pred             -----cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-C----CcceEEEecCCccccccccccCCCCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-P----NLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~----~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                           .+|.++|+|+.  ...++.+..+++|+.++.++++++.... .    .-.+++++||...|..            
T Consensus        79 ~~~~g~id~lv~~Ag~--~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  144 (254)
T 1sby_A           79 FDQLKTVDILINGAGI--LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA------------  144 (254)
T ss_dssp             HHHHSCCCEEEECCCC--CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC------------
T ss_pred             HHhcCCCCEEEECCcc--CCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC------------
Confidence                 67888888764  2344678889999999999999886531 1    1356887775432211            


Q ss_pred             CCCCCCCCCCCCCCcchhHHHH-----HHHHHh--cCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                      .         + ....|+..|.     ...+..  ...|+++++++|+.|.++
T Consensus       145 ~---------~-~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~  187 (254)
T 1sby_A          145 I---------H-QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             C---------T-TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             C---------C-CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCc
Confidence            0         1 1123654332     222211  226899999999999884

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.60  E-value=5.4e-15  Score=133.44  Aligned_cols=210  Identities=13%  Similarity=0.019  Sum_probs=129.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHc-------cCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLS-------QLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~   96 (397)
                      +|+||||||+|+||++++++|++     .|++|++++|+.....  ....++.++.+|++|.+++.++++       .+|
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD  101 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLE-----HGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLR  101 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999     8999999999864310  011247899999999988877665       467


Q ss_pred             CeeEEEEecccCC-C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR-S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        97 ~V~h~a~~~~~~~-~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      .++|.|+...... +    +.+..+++|+.|+.++++++...  ..+..+++++||...+.      +      .     
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------~------~-----  164 (260)
T 3gem_A          102 AVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK------G------S-----  164 (260)
T ss_dssp             EEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT------C------C-----
T ss_pred             EEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC------C------C-----
Confidence            7888877533221 1    33467899999999999888653  22346788777533221      1      0     


Q ss_pred             CCCCCCCCcchhHHHH-----HHHHHhc-CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961          170 MPRLDAPNFYYTLEDI-----LFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       170 ~p~~~~~~~~y~~e~~-----l~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  243 (397)
                          + ....|+..|.     ...+..+ ..++++..++|+.|..+... .......+      ..  ..|+.       
T Consensus       165 ----~-~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~-~~~~~~~~------~~--~~p~~-------  223 (260)
T 3gem_A          165 ----S-KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD-DAAYRANA------LA--KSALG-------  223 (260)
T ss_dssp             ----S-SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------------CCSC-------
T ss_pred             ----C-CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC-CHHHHHHH------Hh--cCCCC-------
Confidence                1 1123654332     2222100 12599999999999873111 00000000      00  11111       


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeee
Q 015961          244 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFK  283 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s  283 (397)
                           -..+..++|.++++++..+...|+++++.+|..++
T Consensus       224 -----r~~~~edva~~v~~L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          224 -----IEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             -----CCCCTHHHHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred             -----CCCCHHHHHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence                 11234556778777776666679999998876543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.60  E-value=4.6e-14  Score=128.87  Aligned_cols=219  Identities=12%  Similarity=0.015  Sum_probs=134.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceEEEccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSD   84 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d   84 (397)
                      ..+|++|||||+|+||++++++|++     +|++|++++|+.....                   ....++.++.+|++|
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   82 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAE-----AGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD   82 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            3468999999999999999999999     8999999999742210                   012467889999999


Q ss_pred             HHHHHHHHc-------cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccc
Q 015961           85 PEETQAKLS-------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHY  149 (397)
Q Consensus        85 ~~~l~~~~~-------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y  149 (397)
                      .+++.++++       .+|.++|+|+.....  .    ++.+..+++|+.|+.++++++...  ..+..+|+++||...+
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  162 (281)
T 3s55_A           83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGH  162 (281)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            988877665       678889987754321  1    145677899999999999986442  1124578877754322


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHHh--cCCCeeEEEEcCCceeeccCCCcchhH-HHH
Q 015961          150 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLV-GAL  221 (397)
Q Consensus       150 ~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~  221 (397)
                      ..            .         + ....|+..|.     ...+..  ...|+++..++|+.|+++-...  ... ..+
T Consensus       163 ~~------------~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~  218 (281)
T 3s55_A          163 SA------------N---------F-AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN--DFVFGTM  218 (281)
T ss_dssp             SC------------C---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS--HHHHHC-
T ss_pred             CC------------C---------C-CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc--hhhhccc
Confidence            11            0         0 1122654332     222221  3468999999999999842111  100 000


Q ss_pred             ---------HHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeee
Q 015961          222 ---------CVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK  283 (397)
Q Consensus       222 ---------~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s  283 (397)
                               .............   +         ....+..++|.++++++....  ..|+++++.+|...+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          219 RPDLEKPTLKDVESVFASLHLQ---Y---------APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             ------CCHHHHHHHHHHHCSS---S---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             cccccccchhHHHHHHHhhhcc---C---------cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence                     0000000000100   0         123345566888888776433  348999999886554

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.60  E-value=9.4e-16  Score=139.47  Aligned_cols=159  Identities=14%  Similarity=-0.015  Sum_probs=107.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC-CCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+. ...      . ....++.++.+|++|++++.++++   
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGR-----RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            357899999999999999999999     899999999942 210      0 012467889999999998887776   


Q ss_pred             ----cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                          ++|.|+|+|+.....    .  ++.+..+++|+.++.++++++.+...+-.+|+++||...|.      +.     
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~------~~-----  163 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM------TG-----  163 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC------CS-----
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhcc------CC-----
Confidence                677788887643211    1  13466789999999999998866411115778777543220      10     


Q ss_pred             CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                      .         + ....|+.     +.+...+..  ...+++++++||+.++++
T Consensus       164 ~---------~-~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~  206 (274)
T 1ja9_A          164 I---------P-NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD  206 (274)
T ss_dssp             C---------C-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             C---------C-CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence            0         1 1122554     333332221  235899999999999883

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.60  E-value=7.6e-14  Score=126.21  Aligned_cols=113  Identities=13%  Similarity=0.161  Sum_probs=88.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~   97 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|++..    ..++.++.+|++|.+++.++++       .+|.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVD-----EGSKVIDLSIHDPG----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESSCCC----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEecCccc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            457999999999999999999999     89999999997654    2468899999999998877765       5788


Q ss_pred             eeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCC
Q 015961           98 VTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT  146 (397)
Q Consensus        98 V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~  146 (397)
                      ++|+|+.....      .++.+..+++|+.|+.++++++...  ..+..+|+++||.
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  134 (264)
T 2dtx_A           78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSV  134 (264)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCG
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCc
Confidence            99987753221      1145678899999999888887653  1235678887754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.60  E-value=1.7e-14  Score=129.81  Aligned_cols=158  Identities=13%  Similarity=0.044  Sum_probs=106.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....    . ....++.++.+|++|++++.++++      
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLAR-----AGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            357999999999999999999999     899999999976411    0 012357889999999998888776      


Q ss_pred             -cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       ++|.++|+|+.....      .++.+..+++|+.++.++.+++...  ..+..+|+++||...+..            .
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~  145 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG------------S  145 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC------------C
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC------------C
Confidence             788899988753221      1144667899999877766655321  123578888875432211            0


Q ss_pred             CCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                               + ....|+..|.     ...+.  ....|+++.+++|+.|+++
T Consensus       146 ---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  187 (255)
T 2q2v_A          146 ---------T-GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTP  187 (255)
T ss_dssp             ---------T-TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCH
T ss_pred             ---------C-CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCc
Confidence                     1 1122554322     22221  1346899999999999983

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.59  E-value=2.1e-14  Score=129.87  Aligned_cols=156  Identities=10%  Similarity=-0.038  Sum_probs=107.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...     .. ..++.++.+|++|.+++.++++      
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDK-----AGATVAIADLDVMAAQAVVAGL-ENGGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTC-TTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHH-hcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            357999999999999999999999     899999999975321     11 1267889999999998887776      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                       ++|.|+|+|+......      ++.+..+++|+.++.++++++.+.   .....+++++||...+.      +      
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------  152 (263)
T 3ak4_A           85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV------G------  152 (263)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS------C------
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc------C------
Confidence             6888999887532211      145667899999999999887653   11145777776432221      0      


Q ss_pred             CCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                      .         + ....|+..|.     ...+.  ....|+++.++||+.|++
T Consensus       153 ~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  194 (263)
T 3ak4_A          153 A---------P-LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKT  194 (263)
T ss_dssp             C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTT
T ss_pred             C---------C-CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccC
Confidence            0         1 1123554332     22221  134589999999999988

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.59  E-value=1.8e-14  Score=131.54  Aligned_cols=224  Identities=11%  Similarity=0.026  Sum_probs=131.0

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      .+.++|++|||||+|+||++++++|++     +|++|++++|+....         ......+.++.+|++|.+++.+++
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   95 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAK-----AGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMM   95 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHH
Confidence            345678999999999999999999999     899999999853211         011256889999999999887776


Q ss_pred             c-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961           93 S-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        93 ~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                      +       .+|.++|.|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+.      +
T Consensus        96 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~  169 (281)
T 3v2h_A           96 AMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV------A  169 (281)
T ss_dssp             HHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc------C
Confidence            5       5777888877533211      144667899999999999987432  11245777777533221      1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhh
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK  229 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~  229 (397)
                            .         + ....|+..|.        ++..+ ...|+++..++|+.|.++-......   .......+..
T Consensus       170 ------~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~~  229 (281)
T 3v2h_A          170 ------S---------P-FKSAYVAAKHGIMGLTKTVALEV-AESGVTVNSICPGYVLTPLVEKQIP---DQARTRGITE  229 (281)
T ss_dssp             ------C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC---------------------
T ss_pred             ------C---------C-CchHHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEECCCCcCcchhhhcc---hhhhhcCCCH
Confidence                  0         1 1123654322        22222 3468999999999999842111100   0000000000


Q ss_pred             hcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961          230 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  280 (397)
Q Consensus       230 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~  280 (397)
                      . ...........   ......+..++|.++++++....  ..|+++++.+|.
T Consensus       230 ~-~~~~~~~~~~~---p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          230 E-QVINEVMLKGQ---PTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             -----------CC---TTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             H-HHHHHHHHhcC---CCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            0 00000011111   11233455666888888775433  458899998763

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.59  E-value=9.4e-15  Score=131.60  Aligned_cols=216  Identities=13%  Similarity=0.089  Sum_probs=135.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ...+|++|||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.++++++++  
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAK-----AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHH-----HTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            34568999999999999999999999     899999999975321      0 012468899999999988777665  


Q ss_pred             -----cCCCeeEEEEecccCC-----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                           .+|.++|.|+......     ++.+..+++|+.|+.++++++...  ..+..+++++||...+..          
T Consensus        84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------  153 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT----------  153 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC----------
T ss_pred             HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC----------
Confidence                 6788999877543211     145667899999999999987543  122457787775332210          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                        .         + ....|+..|.        ++..+ ...|+++..++|+.|..+......  .....  ..+.  ...
T Consensus       154 --~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~--~~~~--~~~  214 (256)
T 3gaf_A          154 --N---------V-RMASYGSSKAAVNHLTRNIAFDV-GPMGIRVNAIAPGAIKTDALATVL--TPEIE--RAML--KHT  214 (256)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCCHHHHHHC--CHHHH--HHHH--TTC
T ss_pred             --C---------C-CchHHHHHHHHHHHHHHHHHHHH-hhhCcEEEEEEEccccCchhhhcc--CHHHH--HHHH--hcC
Confidence              0         1 1123654322        22222 346899999999999873110000  00000  0001  111


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeeh
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  284 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~  284 (397)
                      |+            ....+..++|.++++++...  ...|+++++.+|...++
T Consensus       215 p~------------~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          215 PL------------GRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             TT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             CC------------CCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence            21            11234556688888777542  34589999998876654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.59  E-value=2.5e-15  Score=134.31  Aligned_cols=209  Identities=18%  Similarity=0.135  Sum_probs=129.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|+||||||+|+||++++++|++     +|++|+++ .|++...      .. ...++.++.+|++|.+++.++++    
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~-----~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGK-----AGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID   75 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999     89999985 6754211      00 02357789999999998887776    


Q ss_pred             ---cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         .+|.|+|+|+.....      .++.+..+++|+.++.++++++.+.  ..+..+|+++||...+      ++.    
T Consensus        76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~~----  145 (244)
T 1edo_A           76 AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL------IGN----  145 (244)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH------HCC----
T ss_pred             HcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhc------CCC----
Confidence               578899987753321      1145667899999999999888653  1135788888764322      110    


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          163 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                                 + ....|+..|.     ...+.  ....|++++++||+.++++......   ....  ..+..  ..|+
T Consensus       146 -----------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~--~~~~~--~~~~  206 (244)
T 1edo_A          146 -----------I-GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG---EDME--KKILG--TIPL  206 (244)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---HHHH--HHHHT--SCTT
T ss_pred             -----------C-CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC---hHHH--HHHhh--cCCC
Confidence                       0 1122554322     22211  1346899999999999983211110   1110  00011  1121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC---CCCCCceeccCCC
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP---YAKNEAFNCNNGD  280 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~---~~~g~~yni~~~~  280 (397)
                         +      .   ..+..++|.++++++..+   ...|++|++.+|.
T Consensus       207 ---~------~---~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          207 ---G------R---TGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             ---C------S---CBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             ---C------C---CCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence               0      1   234455677777776433   2358889988763

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.59  E-value=9.1e-15  Score=131.72  Aligned_cols=218  Identities=11%  Similarity=-0.000  Sum_probs=131.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--CCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLS-------QL   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~-------~~   95 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+......  .... .++.+|++|.+++.++++       .+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAR-----EGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            457999999999999999999999     89999999997643100  0013 788999999988777665       57


Q ss_pred             CCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        96 ~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      |.++|+|+.....  .    ++.+..+++|+.|+.++++++...  ..+..+++++||...+.      +      .   
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------~------~---  143 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF------A------E---  143 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS------B------C---
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC------C------C---
Confidence            8899987753221  1    134677899999999999887543  22357888887533221      1      0   


Q ss_pred             CCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHH-HHHHHhhhcCCCceecC
Q 015961          168 EDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALC-VYAAVCKHEGIPLRFPG  239 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~g  239 (397)
                            + ....|+..|.     ...+.  ....|+++.+++|+.+..+-       ..... ...  ..  ........
T Consensus       144 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-------~~~~~~~~~--~~--~~~~~~~~  205 (256)
T 2d1y_A          144 ------Q-ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-------VLEAIALSP--DP--ERTRRDWE  205 (256)
T ss_dssp             ------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHHHC------------CHHHH
T ss_pred             ------C-CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-------hhhcccccc--CC--HHHHHHHH
Confidence                  1 1123654332     22221  13458999999999988721       00000 000  00  00000000


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeeh
Q 015961          240 TKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  284 (397)
Q Consensus       240 ~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~  284 (397)
                      ...   ......+..++|.++++++..+  ...|++|++.+|...++
T Consensus       206 ~~~---~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          206 DLH---ALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             TTS---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             hcC---CCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence            000   1112345566688888776543  24588999998866544

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.58  E-value=3.8e-15  Score=135.23  Aligned_cols=224  Identities=11%  Similarity=0.024  Sum_probs=136.6

Q ss_pred             ccCCCCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHH
Q 015961           21 PARSYQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        21 ~~~~~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ..+..+|+||||||+  |+||.+++++|++     +|++|++++|+....     . .....+.++.+|++|.+++.+++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHH
Confidence            345567899999999  9999999999999     899999999874211     0 01235789999999999887777


Q ss_pred             c-------cCCCeeEEEEecccC---------C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccccccc
Q 015961           93 S-------QLTDVTHIFYVTWTN---------R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFE  154 (397)
Q Consensus        93 ~-------~~~~V~h~a~~~~~~---------~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~  154 (397)
                      +       .+|.++|+|+.....         .  ++....+++|+.++.++++++...-.+-.+++++||...+.    
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----  159 (271)
T 3ek2_A           84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----  159 (271)
T ss_dssp             HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS----
T ss_pred             HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc----
Confidence            5       356688887653210         1  14566789999999999999876522234667666432221    


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH
Q 015961          155 AFGKIKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA  226 (397)
Q Consensus       155 ~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  226 (397)
                        +      .         + ....|+..|        .++..+ ...|+++..++|+.|..+-....... .....  .
T Consensus       160 --~------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~--~  217 (271)
T 3ek2_A          160 --A------I---------P-NYNTMGLAKAALEASVRYLAVSL-GAKGVRVNAISAGPIKTLAASGIKSF-GKILD--F  217 (271)
T ss_dssp             --B------C---------T-TTTHHHHHHHHHHHHHHHHHHHH-HTTTCEEEEEEECCC-----CCCHHH-HHHHH--H
T ss_pred             --C------C---------C-CccchhHHHHHHHHHHHHHHHHH-HhcCcEEEEEecCcccchhhhcccch-HHHHH--H
Confidence              0      0         1 112255422        222222 45689999999999987321111111 11100  0


Q ss_pred             HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHH
Q 015961          227 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWK  289 (397)
Q Consensus       227 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~  289 (397)
                      ...  ..|+.            ...+..++|..+++++..  ....|+++++.+|...++.++.+
T Consensus       218 ~~~--~~~~~------------~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          218 VES--NSPLK------------RNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHH--HSTTS------------SCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HHh--cCCcC------------CCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            111  11211            112345567888777754  33568999999998888776643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.58  E-value=7.6e-14  Score=124.69  Aligned_cols=154  Identities=11%  Similarity=0.114  Sum_probs=106.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-----cCCCee
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-----QLTDVT   99 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-----~~~~V~   99 (397)
                      .+|+||||||+|+||++++++|++.    .|++|++++|+....   ...+.++.+|++|.+++.++++     .+|.++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~----~g~~v~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv   75 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQN----KNHTVINIDIQQSFS---AENLKFIKADLTKQQDITNVLDIIKNVSFDGIF   75 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTS----TTEEEEEEESSCCCC---CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhc----CCcEEEEeccccccc---cccceEEecCcCCHHHHHHHHHHHHhCCCCEEE
Confidence            3578999999999999999999873    588999999876522   2568899999999999888776     456677


Q ss_pred             EEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL  173 (397)
Q Consensus       100 h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~  173 (397)
                      |.|+.....    .  ++.+..+++|+.|+.++++++.....+-.+++++||...+..                     .
T Consensus        76 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------------~  134 (244)
T 4e4y_A           76 LNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA---------------------K  134 (244)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC---------------------C
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC---------------------C
Confidence            877643211    1  145667899999999999998765211246777764332210                     0


Q ss_pred             CCCCcchhHHHHH--------HHHHhcCCCeeEEEEcCCceee
Q 015961          174 DAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       174 ~~~~~~y~~e~~l--------~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      + ....|+..|..        +... ...|+++..++|+.|..
T Consensus       135 ~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T  175 (244)
T 4e4y_A          135 P-NSFAYTLSKGAIAQMTKSLALDL-AKYQIRVNTVCPGTVDT  175 (244)
T ss_dssp             T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEESCBCC
T ss_pred             C-CCchhHHHHHHHHHHHHHHHHHH-HHcCeEEEEEecCccCc
Confidence            1 12236543222        2222 35689999999999987

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.58  E-value=5.4e-15  Score=133.50  Aligned_cols=213  Identities=15%  Similarity=0.033  Sum_probs=130.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC-CCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR-RPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R-~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++| +....      . ....++.++.+|++|.+++.++++   
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFAT-----EKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            457999999999999999999999     8999999999 43211      0 012357889999999988877765   


Q ss_pred             ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC--CC-cceEEEecCCccccccccccCCCC
Q 015961           94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PN-LRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~-~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                          .+|.|+|+|+.....      .++.+..+++|+.++.++++++....  .+ ..+|+++||...+.          
T Consensus        81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~----------  150 (261)
T 1gee_A           81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----------  150 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC----------
Confidence                678899988753221      11456678999999999888776541  11 45788777532110          


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                +. + ....|+..|     +...+.  ....+++++++||+.|+++-..   .....-.....+.+  ..
T Consensus       151 ----------~~-~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~--~~  213 (261)
T 1gee_A          151 ----------PW-P-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA---EKFADPEQRADVES--MI  213 (261)
T ss_dssp             ----------CC-T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH---HHHHSHHHHHHHHT--TC
T ss_pred             ----------CC-C-CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh---hcccChhHHHHHHh--cC
Confidence                      00 1 122366433     222221  1345899999999999983210   10000000000111  11


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                      |+            ....+..++|..+++++...  ...|+++++.++..
T Consensus       214 ~~------------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          214 PM------------GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             TT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CC------------CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence            11            11234555677777776532  34588899987754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.58  E-value=7e-15  Score=133.14  Aligned_cols=214  Identities=10%  Similarity=0.019  Sum_probs=130.4

Q ss_pred             CCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|+||||||+  |+||++++++|++     +|++|++++|+....     . .......++.+|++|++++.++++    
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHH-----TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999  9999999999999     899999999976210     0 001234789999999998877765    


Q ss_pred             ---cCCCeeEEEEeccc-----------CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCC
Q 015961           94 ---QLTDVTHIFYVTWT-----------NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~-----------~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                         .+|.++|+|+....           ..++.+..+++|+.++.++++++...-.+-.+|+++||...+.      +  
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~--  155 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------A--  155 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------B--
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc------C--
Confidence               45668887764321           1114466789999999999999976521124677776532221      0  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcC
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  232 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  232 (397)
                          .         + ....|+..     .+...+.  ....|+++.+++|+.|.++........ .....  .+.+  .
T Consensus       156 ----~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~--~~~~--~  216 (265)
T 1qsg_A          156 ----I---------P-NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-RKMLA--HCEA--V  216 (265)
T ss_dssp             ----C---------T-TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH-HHHHH--HHHH--H
T ss_pred             ----C---------C-CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccccc-HHHHH--HHHh--c
Confidence                0         0 01125542     2222221  134689999999999998421111111 11100  0111  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  283 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s  283 (397)
                      .|+.            ...+..++|.++++++...  ...|++|++.+|...+
T Consensus       217 ~p~~------------~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          217 TPIR------------RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             STTS------------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             CCCC------------CCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            1211            1224455688887776542  2358899998876544

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.58  E-value=8e-15  Score=133.30  Aligned_cols=210  Identities=14%  Similarity=0.118  Sum_probs=126.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .++|+||||||+|+||++++++|++     .|++|+++. |+....      . ....++.++.+|++|.+++.++++  
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   98 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAAR-----QGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAV   98 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999     899998874 432210      0 012467899999999988877665  


Q ss_pred             -----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc-----CCCcceEEEecCCcccccccccc
Q 015961           94 -----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN-----APNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                           .+|.|+|+|+......       ++....+++|+.|+.++++++...     ..+..+|+++||...+.      
T Consensus        99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  172 (272)
T 4e3z_A           99 DRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL------  172 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHH------
T ss_pred             HHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhcc------
Confidence                 5678899877543211       145677899999999998877653     11245788777543331      


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhHHHHH--------HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHh
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC  228 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l--------~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~  228 (397)
                      +.               +.....|+..|..        +..+ ...|+++.+++|+.|.++-...  ......   .  .
T Consensus       173 ~~---------------~~~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~--~~~~~~---~--~  229 (272)
T 4e3z_A          173 GS---------------ATQYVDYAASKAAIDTFTIGLAREV-AAEGIRVNAVRPGIIETDLHAS--GGLPDR---A--R  229 (272)
T ss_dssp             CC---------------TTTCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBC---------------------
T ss_pred             CC---------------CCCcchhHHHHHHHHHHHHHHHHHH-HHcCcEEEEEecCCCcCCcccc--cCChHH---H--H
Confidence            11               0011226543322        2222 3458999999999999832111  000000   0  0


Q ss_pred             h-hcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCC
Q 015961          229 K-HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNG  279 (397)
Q Consensus       229 ~-~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~  279 (397)
                      . ....+            .....+..++|.++++++...  ...|++|++.+|
T Consensus       230 ~~~~~~~------------~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          230 EMAPSVP------------MQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             ----CCT------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhhcCC------------cCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            0 00111            111224556688888877533  345899999876

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.58  E-value=4.2e-14  Score=128.25  Aligned_cols=157  Identities=14%  Similarity=0.095  Sum_probs=107.9

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      .+..+|+||||||+|+||++++++|++     +|++|++++|+.....   ..+..+.+|++|.+++.++++       .
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVR-----YGAKVVSVSLDEKSDV---NVSDHFKIDVTNEEEVKEAVEKTTKKYGR   81 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCC--CT---TSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCchhcc---CceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            455678999999999999999999999     8999999999865432   367789999999988877665       5


Q ss_pred             CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      +|.++|.|+......      +..+..+++|+.|+.++++++...  ..+..+|+++||...|...              
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------  147 (269)
T 3vtz_A           82 IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT--------------  147 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC--------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC--------------
Confidence            788899877532211      134567889999999998887653  1124577877754333110              


Q ss_pred             CCCCCCCCCCCcchhHHHH-----HHHHHhc-CCCeeEEEEcCCceee
Q 015961          167 TEDMPRLDAPNFYYTLEDI-----LFEEVEK-KEELSWSVHRPDTIFG  208 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~e~~-----l~~~~~~-~~g~~~~ilRp~~v~G  208 (397)
                             + ....|+..|.     ...+..+ ..++++..++|+.|.+
T Consensus       148 -------~-~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T  187 (269)
T 3vtz_A          148 -------K-NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMT  187 (269)
T ss_dssp             -------T-TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCC
T ss_pred             -------C-CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcC
Confidence                   1 1123654322     2222101 1279999999999988

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.58  E-value=7.9e-15  Score=131.34  Aligned_cols=211  Identities=15%  Similarity=0.115  Sum_probs=132.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.++++++++.   
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALAS-----KGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 0124688999999999988776653   


Q ss_pred             ----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           95 ----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          +|.++|+|+.....      .++....+++|+.++.++++++...  ..+..+++++||...+...          
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  148 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN----------  148 (247)
T ss_dssp             TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC----------
Confidence                57788887653221      1145667899999999999887553  1124577877754322110          


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          163 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                                 + ....|+..|.     ...+.  ....|+++..++|+.|..+-......   .....  ..  ...|.
T Consensus       149 -----------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~--~~--~~~~~  209 (247)
T 3lyl_A          149 -----------P-GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD---EQKSF--IA--TKIPS  209 (247)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH---HHHHH--HH--TTSTT
T ss_pred             -----------C-CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH---HHHHH--Hh--hcCCC
Confidence                       1 1123664333     22221  13568999999999998742221111   11000  01  11121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                                  ....+..++|.++++++...  ...|+++++.+|..
T Consensus       210 ------------~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          210 ------------GQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             ------------CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             ------------CCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEe
Confidence                        12234455678877776543  34589999987754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.58  E-value=6.9e-15  Score=132.91  Aligned_cols=218  Identities=13%  Similarity=0.024  Sum_probs=132.5

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|+||||||+  |+||++++++|++     +|++|++++|+....     . .....+.++.+|++|++++.++++   
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKE-----AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHH-----HTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            45789999999  9999999999998     899999999975310     0 001247889999999998877765   


Q ss_pred             ----cCCCeeEEEEeccc--------C--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCC
Q 015961           94 ----QLTDVTHIFYVTWT--------N--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~--------~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                          .+|.++|+|+....        .  .++.+..+++|+.|+.++++++...-.+-.+|+++||...+.      +  
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~--  153 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK------V--  153 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS------B--
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC------C--
Confidence                56778888764321        1  114567789999999999999976421124677776432221      0  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcC
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  232 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  232 (397)
                          .         + ....|+..|.     ...+.  ....|+++.+++|+.|+++........ .....  .+.+  .
T Consensus       154 ----~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~--~~~~--~  214 (261)
T 2wyu_A          154 ----V---------P-KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF-TKMYD--RVAQ--T  214 (261)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTH-HHHHH--HHHH--H
T ss_pred             ----C---------C-CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcccc-HHHHH--HHHh--c
Confidence                0         1 1112554322     22221  134589999999999998421111111 11100  0111  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeehHH
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKH  286 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~~e  286 (397)
                      .|+.            ...+..++|..+++++...  ...|++|++.+|...+..|
T Consensus       215 ~p~~------------~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          215 APLR------------RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             STTS------------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             CCCC------------CCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            1211            1223455677777776532  2358899999886655444

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.58  E-value=2.2e-15  Score=135.52  Aligned_cols=214  Identities=11%  Similarity=0.040  Sum_probs=128.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--C--CCCCc-eEEEccCCCHHHHHHHH------c
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLV-EYVQCDVSDPEETQAKL------S   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v-~~~~~Dl~d~~~l~~~~------~   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|++....  .  ...++ .++.+|++|.+++.+++      .
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAA-----SGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            357899999999999999999999     8999999999753210  0  01234 78999999999887766      3


Q ss_pred             cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.|+|+|+.....  .    +..+..+++|+.++.++++++...  ..+..+|+++||...+..            . 
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~-  151 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIV------------N-  151 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------C-
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccC------------C-
Confidence            578899988753321  1    134567889999987777766432  113578888875432211            0 


Q ss_pred             CCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec
Q 015961          166 FTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  238 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (397)
                           |..+  ...|+..|     +...+.  ....|++++++||+.++++....... ...+  ...+.+  ..|+   
T Consensus       152 -----~~~~--~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~--~~~~~~--~~~~---  216 (254)
T 2wsb_A          152 -----RPQF--ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE-RPEL--FETWLD--MTPM---  216 (254)
T ss_dssp             -----SSSC--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT-CHHH--HHHHHH--TSTT---
T ss_pred             -----CCCc--chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc-ChHH--HHHHHh--cCCC---
Confidence                 1011  12365433     222222  13358999999999999831100000 0000  000111  1121   


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          239 GTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       239 g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                               ....+..++|..+++++...  ...|+++++.+|.
T Consensus       217 ---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          217 ---------GRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             ---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ---------CCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence                     11234555678877776542  3458889988763

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.58  E-value=6.2e-15  Score=133.41  Aligned_cols=215  Identities=13%  Similarity=0.062  Sum_probs=131.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|.+++.++++   
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   80 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLA-----KGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM   80 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHH-----CCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899999998865321       0 012468899999999998877765   


Q ss_pred             ----cCCCeeEEEEecccC--------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961           94 ----QLTDVTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                          .+|.++|+|+.....        .++....+++|+.|+.++++++...  ..+..+++++|+...+       +. 
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~-------~~-  152 (264)
T 3i4f_A           81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGAD-------SA-  152 (264)
T ss_dssp             HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGG-------GC-
T ss_pred             HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhc-------cc-
Confidence                678889987731111        1134667899999999999988332  1124677777643111       00 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcC
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  232 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  232 (397)
                          .      + .+ ....|+..|.     ...+.  ....|+++.+++|+.|+++-.....   ...      .+...
T Consensus       153 ----~------~-~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~------~~~~~  211 (264)
T 3i4f_A          153 ----P------G-WI-YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI---QEA------RQLKE  211 (264)
T ss_dssp             ----C------C-CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---HHH------HHC--
T ss_pred             ----C------C-CC-CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---HHH------HHHHh
Confidence                0      0 01 1123654322     22211  1346899999999999984221111   111      01000


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  283 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s  283 (397)
                      ...          ......+.+++|.++++++...  ...|+++++.+|-...
T Consensus       212 ~~~----------p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          212 HNT----------PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             hcC----------CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeec
Confidence            000          1112234556688888777543  2458999998876543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.58  E-value=2.3e-14  Score=133.40  Aligned_cols=158  Identities=17%  Similarity=0.100  Sum_probs=105.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +|+||||||+|+||++++++|++     +|++|++.+|+.....            ....++.++.+|++|.+++.++++
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~-----~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~   79 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAG-----AGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAID   79 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence            47899999999999999999999     8999999999742210            012468899999999998887776


Q ss_pred             -------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCC
Q 015961           94 -------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                             ++|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++.+||...+.      +.
T Consensus        80 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~------~~  153 (324)
T 3u9l_A           80 QIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAG------GT  153 (324)
T ss_dssp             HHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------CC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhcc------CC
Confidence                   6888999877532211      144667899999999999988432  11246777777532221      10


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                           .         + ....|+..|.     ...+.  ....|+++++++|+.|.++
T Consensus       154 -----~---------~-~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~  196 (324)
T 3u9l_A          154 -----P---------P-YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG  196 (324)
T ss_dssp             -----C---------S-SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred             -----C---------C-cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence                 0         1 1122554332     22221  1346899999999999863

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.58  E-value=1.2e-14  Score=131.25  Aligned_cols=218  Identities=15%  Similarity=0.083  Sum_probs=131.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHH-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL-----   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~-----   92 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|++++.+++     
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELAS-----LGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            357999999999999999999999     899999999975321      0 01235788999999998887776     


Q ss_pred             ---ccCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           93 ---SQLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        93 ---~~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         ..+|.++|+|+.....      .++.+..+++|+.|+.++++++...  ..+..+++++||...+.      +    
T Consensus        83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~----  152 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL------A----  152 (260)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS------C----
T ss_pred             HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------C----
Confidence               3577788887743211      1145667899999999999988542  12357888887533221      0    


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH-----HHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (397)
                        .         + ....|+..|     +...+..  ...|+++.+++|+.+.++-................+..  ..|
T Consensus       153 --~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~  218 (260)
T 2ae2_A          153 --V---------P-YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID--RCA  218 (260)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH--TST
T ss_pred             --C---------C-CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHh--cCC
Confidence              0         1 112265433     3322221  24589999999999987310000000000000000011  111


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  283 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s  283 (397)
                      +            ....+..++|..+++++..+  ...|+++++.+|...+
T Consensus       219 ~------------~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          219 L------------RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             T------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             C------------CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcccc
Confidence            1            11234555677777776542  2458899998875443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.58  E-value=1.9e-14  Score=128.76  Aligned_cols=163  Identities=13%  Similarity=0.075  Sum_probs=108.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      +|+||||||+|+||++++++|++     +|  ++|++++|+.....    ....++.++.+|++|.+++.++++      
T Consensus         3 ~k~vlItGasggiG~~la~~l~~-----~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVK-----DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHT-----CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHh-----cCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999     78  99999999754320    013478899999999988877776      


Q ss_pred             ---cCCCeeEEEEecc-cC----C--CcHHHHHHhHHHHHHHHHHHHcccC--C------C-----cceEEEecCCcccc
Q 015961           94 ---QLTDVTHIFYVTW-TN----R--STEAENCKINGSMFRNVLRAVIPNA--P------N-----LRHVCLQTGTKHYL  150 (397)
Q Consensus        94 ---~~~~V~h~a~~~~-~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~--~------~-----~~~~~~~s~~~~y~  150 (397)
                         .+|.|+|+|+... ..    .  +.....+++|+.++.++++++...-  .      +     ..+|+++||...+.
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence               7888999987543 11    1  1456678999999999988876530  0      1     46788777543321


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHHh--cCCCeeEEEEcCCceee
Q 015961          151 GPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       151 ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                            +.      + .+..+  +.+...|+..|     +...+..  ...|+++.+++|+.|..
T Consensus       158 ------~~------~-~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  207 (250)
T 1yo6_A          158 ------TD------N-TSGSA--QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT  207 (250)
T ss_dssp             ------TT------C-CSTTS--SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred             ------CC------c-ccccc--cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceec
Confidence                  10      0 01111  11223366433     3332221  23479999999998876

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.58  E-value=5.2e-14  Score=128.34  Aligned_cols=224  Identities=14%  Similarity=0.076  Sum_probs=135.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceEEEccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSD   84 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d   84 (397)
                      ..+|+||||||+|+||.+++++|++     +|++|++++|+.....                   ....++.++.+|++|
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   85 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAA-----DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD   85 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            3568999999999999999999999     8999999998732100                   012467899999999


Q ss_pred             HHHHHHHHc-------cCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCcccccc
Q 015961           85 PEETQAKLS-------QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGP  152 (397)
Q Consensus        85 ~~~l~~~~~-------~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss  152 (397)
                      ++++.++++       .+|.++|+|+......  ++.+..+++|+.|+.++++++...   ...-.+|+++||...+   
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~---  162 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL---  162 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT---
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc---
Confidence            998877775       6788999877543322  245678899999999999987653   1123567777753322   


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHH
Q 015961          153 FEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVY  224 (397)
Q Consensus       153 ~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~  224 (397)
                         ++.    ..      + .+ ....|+..|.        ++..+ ...|+++..++|+.|.+  +..........  +
T Consensus       163 ---~~~----~~------~-~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T--~~~~~~~~~~~--~  222 (278)
T 3sx2_A          163 ---AGV----GS------A-DP-GSVGYVAAKHGVVGLMRVYANLL-AGQMIRVNSIHPSGVET--PMINNEFTREW--L  222 (278)
T ss_dssp             ---SCC----CC------S-SH-HHHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCBSS--TTTSSHHHHHH--H
T ss_pred             ---CCC----cc------C-CC-CchHhHHHHHHHHHHHHHHHHHH-hccCcEEEEEecCCccC--ccchhhhHHHH--H
Confidence               110    00      0 01 1123654332        22222 35679999999999998  32211111111  0


Q ss_pred             HHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          225 AAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       225 ~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      ..... ........+...   . ....+..++|.++++++...  ...|+++++.+|.
T Consensus       223 ~~~~~-~~~~~~~~~~~~---p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          223 AKMAA-ATDTPGAMGNAM---P-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             HHHHH-HCC--CTTSCSS---S-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hhccc-hhhhhhhhhhhc---C-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            00011 111101111111   1 23345666788888877543  3458899998764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.58  E-value=2.7e-14  Score=131.12  Aligned_cols=156  Identities=12%  Similarity=0.103  Sum_probs=110.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....        .....++.++.+|++|.++++++++   
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  120 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAK-----EGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV  120 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321        0112468899999999988777665   


Q ss_pred             ----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          .+|.++|+|+......       ++.+..+++|+.|+.++++++...-.+-.+|+++||...+...          
T Consensus       121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------  190 (291)
T 3ijr_A          121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN----------  190 (291)
T ss_dssp             HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC----------
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC----------
Confidence                5788888876533211       1456788999999999999997753334578877764433210          


Q ss_pred             CCCCCCCCCCCCCCCcchhHHH-----H---HHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTLED-----I---LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~-----~---l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 + ....|+..|     +   ++..+ ...|+++..++|+.|.+
T Consensus       191 -----------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~T  231 (291)
T 3ijr_A          191 -----------E-TLIDYSATKGAIVAFTRSLSQSL-VQKGIRVNGVAPGPIWT  231 (291)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             -----------C-CChhHHHHHHHHHHHHHHHHHHH-hhcCEEEEEEeeCCCcC
Confidence                       0 112255422     2   22222 34589999999999998

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.57  E-value=3.6e-14  Score=127.47  Aligned_cols=207  Identities=17%  Similarity=0.148  Sum_probs=128.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc-------C
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------L   95 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-------~   95 (397)
                      ..++|+||||||+|+||++++++|++     +|++|++++|++...    ..+.++.+|++|++++.++++.       +
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~----~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFAD-----AGDKVAITYRSGEPP----EGFLAVKCDITDTEQVEQAYKEIEETHGPV   88 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSSCCC----TTSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChHhh----ccceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            34568999999999999999999999     899999999975432    3478999999999988776654       5


Q ss_pred             CCeeEEEEeccc------CCCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        96 ~~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      |.++|.|+....      ..++.+..+++|+.++.++++++...  ..+..+|+++||...+.+                
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------  152 (253)
T 2nm0_A           89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG----------------  152 (253)
T ss_dssp             SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC----------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC----------------
Confidence            778888764321      12256778899999999998877543  112467887775322110                


Q ss_pred             CCCCCCCCCCcchhHHHH-----H---HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 015961          168 EDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG  239 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g  239 (397)
                           .+ ....|+..|.     .   +... ...|+++.+++|+.|..+-...   .....  ...+..  ..|+    
T Consensus       153 -----~~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~~~~~---~~~~~--~~~~~~--~~p~----  214 (253)
T 2nm0_A          153 -----SA-GQANYAASKAGLVGFARSLAREL-GSRNITFNVVAPGFVDTDMTKV---LTDEQ--RANIVS--QVPL----  214 (253)
T ss_dssp             -----HH-HHHHHHHHHHHHHHHHHHHHHHH-CSSSEEEEEEEECSBCC------------C--HHHHHT--TCTT----
T ss_pred             -----CC-CcHHHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEeCcCcCcchhh---cCHHH--HHHHHh--cCCC----
Confidence                 00 0122554322     2   2222 4568999999999887631110   00000  000000  1111    


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          240 TKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       240 ~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                              ....+..++|..+++++..+  ...|+.+++.+|.
T Consensus       215 --------~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          215 --------GRYARPEEIAATVRFLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             --------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             --------CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence                    11234555678877776543  2458888887764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.57  E-value=3.7e-15  Score=133.19  Aligned_cols=206  Identities=14%  Similarity=0.084  Sum_probs=124.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCceE-EEccCCCHHHHHHHHc----
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEY-VQCDVSDPEETQAKLS----   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~-~~~Dl~d~~~l~~~~~----   93 (397)
                      |+||||||+|+||++++++|++     +|++|+++ +|++...      . ....++.. +.+|++|.++++++++    
T Consensus         2 k~vlITGasggiG~~~a~~l~~-----~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAE-----DGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE   76 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHT-----TTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999     89999998 6764221      0 01134566 8999999988777654    


Q ss_pred             ---cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHH----cccCCCcceEEEecCCccccccccccCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAV----IPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                         ++|.|+|+|+.....      .++....+++|+.++.++++++    ++.  +..+++++||...+      ++.  
T Consensus        77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~iv~~sS~~~~------~~~--  146 (245)
T 2ph3_A           77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA--RFGRIVNITSVVGI------LGN--  146 (245)
T ss_dssp             HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEECCTHHH------HCC--
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc--CCCEEEEEeChhhc------cCC--
Confidence               678899987743211      1145667899999955555544    433  25788888754322      110  


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                   + ....|+..|.     ...+.  ....|++++++||+.++++......   ....  ..+.+  ..
T Consensus       147 -------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~--~~~~~--~~  205 (245)
T 2ph3_A          147 -------------P-GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---QEVK--EAYLK--QI  205 (245)
T ss_dssp             -------------S-SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHH--HHHHH--TC
T ss_pred             -------------C-CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---HHHH--HHHHh--cC
Confidence                         0 1122554332     22221  1345899999999999984211111   1110  00111  11


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      |.         ..   ..+..++|.++++++..+  ...|+.|++.+|.
T Consensus       206 ~~---------~~---~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          206 PA---------GR---FGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             TT---------CS---CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CC---------CC---CcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            21         01   234555688877776543  2358899998753

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.57  E-value=1.7e-14  Score=132.02  Aligned_cols=210  Identities=14%  Similarity=0.102  Sum_probs=129.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|.++++++++    
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAK-----SVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTT-----TSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999     899999988864321      0 012467889999999998877764    


Q ss_pred             ---cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         .+|.|+|+|+.....    .  ++....+++|+.|+.++++++...  ..+..+|+++||...+.      +.    
T Consensus       118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------~~----  187 (285)
T 2c07_A          118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT------GN----  187 (285)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------CC----
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc------CC----
Confidence               578899987753221    1  145677899999988887777542  11257888887643321      10    


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          163 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                                 + ....|+..|.     ...+.  ....|++++++||+.+.++-.....   ....  .....  ..|+
T Consensus       188 -----------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~--~~~~~--~~~~  248 (285)
T 2c07_A          188 -----------V-GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---EQIK--KNIIS--NIPA  248 (285)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---HHHH--HHHHT--TCTT
T ss_pred             -----------C-CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---HHHH--HHHHh--hCCC
Confidence                       0 1122554333     22221  1345899999999999884211111   1110  00011  1121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  280 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~  280 (397)
                         +      .   ..+..++|.++++++..+.  ..|++|++.+|.
T Consensus       249 ---~------~---~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          249 ---G------R---MGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             ---S------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             ---C------C---CCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence               1      1   2344556777777765432  458889988764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.57  E-value=3.8e-14  Score=126.95  Aligned_cols=208  Identities=13%  Similarity=0.054  Sum_probs=128.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLT   96 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~   96 (397)
                      .++|+||||||+|+||++++++|++     +|++|++++|++...    ..+..+.+|++|+++++++++       .+|
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   83 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAA-----DGHKVAVTHRGSGAP----KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVE   83 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSSCCC----TTSEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChHHH----HHhcCeeccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3468999999999999999999999     899999999976432    233358999999988877665       467


Q ss_pred             CeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  168 (397)
Q Consensus        97 ~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E  168 (397)
                      .++|+|+.....      .++.+..+++|+.++.++++++...  ..+..+++++||...+      ++.          
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~------~~~----------  147 (247)
T 1uzm_A           84 VLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL------WGI----------  147 (247)
T ss_dssp             EEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhc------cCC----------
Confidence            888987643211      1145678899999999999987643  1235778877753221      110          


Q ss_pred             CCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCc
Q 015961          169 DMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK  241 (397)
Q Consensus       169 ~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~  241 (397)
                           + ....|+..|.     ...+.  ....|+++.+++|+.|..+-..   ......  ......  ..|+      
T Consensus       148 -----~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---~~~~~~--~~~~~~--~~p~------  208 (247)
T 1uzm_A          148 -----G-NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR---ALDERI--QQGALQ--FIPA------  208 (247)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---HSCHHH--HHHHGG--GCTT------
T ss_pred             -----C-CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh---hcCHHH--HHHHHh--cCCC------
Confidence                 1 1122554332     22211  1346899999999999772100   000000  000011  1110      


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          242 AAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       242 ~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                            ....+..++|..+++++..+  ...|+++++.+|..
T Consensus       209 ------~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          209 ------KRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             ------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             ------CCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence                  11234556688877776542  34588899887643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.57  E-value=3.5e-14  Score=130.48  Aligned_cols=157  Identities=13%  Similarity=0.065  Sum_probs=108.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....         .....++.++.+|++|.++++++++  
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAR-----EGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            458999999999999999999999     899999998863210         0012467889999999988766654  


Q ss_pred             -----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                           .+|.++|+|+......       ++.+..+++|+.|+.++++++.....+-.+|+++||...|...         
T Consensus       123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~---------  193 (294)
T 3r3s_A          123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS---------  193 (294)
T ss_dssp             HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC---------
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC---------
Confidence                 5788888877532111       1456788999999999999998763333578877754333110         


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                                  + ....|+..|.        ++..+ ...|+++..++|+.|.++
T Consensus       194 ------------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~  235 (294)
T 3r3s_A          194 ------------P-HLLDYAATKAAILNYSRGLAKQV-AEKGIRVNIVAPGPIWTA  235 (294)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCSH
T ss_pred             ------------C-CchHHHHHHHHHHHHHHHHHHHH-hhcCeEEEEEecCcCccc
Confidence                        1 1122654322        22222 345899999999999983

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.57  E-value=1.9e-14  Score=130.11  Aligned_cols=213  Identities=16%  Similarity=0.102  Sum_probs=132.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....        .....++.++.+|++|+++++++++   
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFAR-----AGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321        0111468899999999988877665   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|+|+......      ++.+..+++|+.++.++++++...  ..+..+++++||...+     ..+    
T Consensus        84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-----~~~----  154 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGP-----ITG----  154 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTT-----TBC----
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc-----cCC----
Confidence                6788899877532211      134567899999999998887664  1124577777642211     011    


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (397)
                                 .+ ....|+..|     +...+.  ....|+++..++|+.|.++......   ...  .....+  ..|
T Consensus       155 -----------~~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~--~~~~~~--~~p  215 (262)
T 3pk0_A          155 -----------YP-GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG---EEY--IASMAR--SIP  215 (262)
T ss_dssp             -----------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC---HHH--HHHHHT--TST
T ss_pred             -----------CC-CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC---HHH--HHHHHh--cCC
Confidence                       01 112365422     222221  1346899999999999984211111   111  000111  112


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  282 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~  282 (397)
                      +   +         ...+..++|.++++++...  ...|+++++.+|...
T Consensus       216 ~---~---------r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          216 A---G---------ALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             T---S---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             C---C---------CCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            1   1         1224455677777776543  346899999887653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.57  E-value=1.8e-14  Score=130.45  Aligned_cols=214  Identities=14%  Similarity=0.025  Sum_probs=129.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLT   96 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~   96 (397)
                      ..+|+||||||+|+||++++++|++     +|++|++++|+....    .....+.+|++|.+++..+++       .+|
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~-----~G~~V~~~~r~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   96 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRA-----AGARVAVADRAVAGI----AADLHLPGDLREAAYADGLPGAVAAGLGRLD   96 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEECSSCCTTS----CCSEECCCCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHH----HhhhccCcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            3468999999999999999999999     899999999976443    122456899999987765554       578


Q ss_pred             CeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  168 (397)
Q Consensus        97 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E  168 (397)
                      .++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+..                 
T Consensus        97 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------------  159 (266)
T 3uxy_A           97 IVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-----------------  159 (266)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-----------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------------
Confidence            8999877543211      145667889999999999988432  112467787775332210                 


Q ss_pred             CCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchh-HHHHHHH-HHHhhhcCCCceecC
Q 015961          169 DMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNL-VGALCVY-AAVCKHEGIPLRFPG  239 (397)
Q Consensus       169 ~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~-~~i~~~~~~~~~~~g  239 (397)
                          .+ ....|+..|.     ...+.  ....|+++.+++|+.|.++-....... ....... ..+.  ...|     
T Consensus       160 ----~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~p-----  227 (266)
T 3uxy_A          160 ----GP-GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELG--RTVP-----  227 (266)
T ss_dssp             ----CT-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHH--TTST-----
T ss_pred             ----CC-CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHH--hcCC-----
Confidence                01 1223654322     22211  134589999999999988310000000 0000000 0000  0111     


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961          240 TKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  282 (397)
Q Consensus       240 ~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~  282 (397)
                             .....+..++|.++++++....  ..|+++++.+|..+
T Consensus       228 -------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          228 -------LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             -------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             -------CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence                   1122345566888888775432  45899999887654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.57  E-value=1.3e-14  Score=130.59  Aligned_cols=222  Identities=12%  Similarity=0.026  Sum_probs=135.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ..+|++|||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|.+++..+++      
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVE-----GGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            3468999999999999999999999     8999999999753210    001367899999999988766554      


Q ss_pred             -cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                       .+|.++|.|+.....      .++.+..+++|+.|+.++++++...-.+-.+++++||...+.+            .  
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~--  146 (255)
T 4eso_A           81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG------------H--  146 (255)
T ss_dssp             SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB------------C--
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC------------C--
Confidence             466677876643221      1145667899999999999998764222346777765332211            0  


Q ss_pred             CCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCC-cchhHHHHHHHHHHhhhcCCCceec
Q 015961          167 TEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFP  238 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~  238 (397)
                             | ....|+..|.     ...+.  ....|+++..++|+.|..+-... .... .....+..... ...|+   
T Consensus       147 -------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~-~~~p~---  213 (255)
T 4eso_A          147 -------P-GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITE-AERAEFKTLGD-NITPM---  213 (255)
T ss_dssp             -------T-TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCH-HHHHHHHHHHH-HHSTT---
T ss_pred             -------C-CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCCh-hhHHHHHHHHh-ccCCC---
Confidence                   1 1223654332     22221  13458999999999998842211 1110 00101111011 01121   


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcC-CCCCCCceeccCCCeeehHH
Q 015961          239 GTKAAWECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWKH  286 (397)
Q Consensus       239 g~~~~~~~~~~~~da~~la~~~~~~~~~-~~~~g~~yni~~~~~~s~~e  286 (397)
                               ....+.+++|.++++++.. ....|+++++.+|...++.+
T Consensus       214 ---------~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          214 ---------KRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             ---------SSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             ---------CCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence                     1122445567777777654 23458999999887766654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.56  E-value=2.3e-14  Score=130.02  Aligned_cols=208  Identities=18%  Similarity=0.141  Sum_probs=131.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|.++++++++   
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAA-----AGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999     899999999853211       0 012467889999999988877665   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|.|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+.      +.   
T Consensus       102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~~---  172 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM------GN---  172 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH------CC---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC------CC---
Confidence                5788999877543211      145667899999999999887543  11245777777533221      10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                  + ....|+..|.        ++..+ ...|+++..++|+.|..  +-.. ....     ..+..  ..
T Consensus       173 ------------~-~~~~Y~asK~a~~~l~~~la~e~-~~~gi~vn~v~PG~v~T--~~~~-~~~~-----~~~~~--~~  228 (269)
T 4dmm_A          173 ------------P-GQANYSAAKAGVIGLTKTVAKEL-ASRGITVNAVAPGFIAT--DMTS-ELAA-----EKLLE--VI  228 (269)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBTT--SCSC-HHHH-----HHHGG--GC
T ss_pred             ------------C-CchhHHHHHHHHHHHHHHHHHHH-hhhCcEEEEEEECCCcC--cccc-cccH-----HHHHh--cC
Confidence                        0 1123664333        22222 35689999999999987  3211 1100     00111  11


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC---CCCCCceeccCCCee
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP---YAKNEAFNCNNGDVF  282 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~---~~~g~~yni~~~~~~  282 (397)
                      |+            ....+..++|.++++++..+   ...|+++++.+|..+
T Consensus       229 p~------------~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          229 PL------------GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             TT------------SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             CC------------CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            21            11234455678877777653   245899999887544

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.56  E-value=2.4e-14  Score=129.23  Aligned_cols=158  Identities=13%  Similarity=0.028  Sum_probs=108.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-CC------CC--CCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-NW------NA--DHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~~------~~--~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ++|+||||||+|+||++++++|++     .|++|++++|+... ..      ..  ..++.++.+|++|++++.++++  
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   77 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAA-----QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA   77 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----cCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHH
Confidence            357999999999999999999999     89999999997543 10      00  2467889999999998877665  


Q ss_pred             -----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 -----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           .+|.++|+|+.....      .++.+..+++|+.|+.++++++...  ..+..+|+++||...+.      +   
T Consensus        78 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~---  148 (260)
T 1x1t_A           78 VRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV------A---  148 (260)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C---
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc------C---
Confidence                 578899987753211      1145667899999999998887543  11256788877533221      1   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                         .         + ....|+..|.     ...+.  ....|+++.+++|+.|.++
T Consensus       149 ---~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  191 (260)
T 1x1t_A          149 ---S---------A-NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP  191 (260)
T ss_dssp             ---C---------T-TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred             ---C---------C-CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCc
Confidence               0         1 1122654322     22211  1356899999999999883

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.56  E-value=1.9e-14  Score=129.62  Aligned_cols=216  Identities=12%  Similarity=0.044  Sum_probs=131.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....       .....++.++.+|++|.+++.++++    
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAK-----EGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDE   79 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321       0112468899999999988877665    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|+|+......      ++.+..+++|+.|+.++++++...   .....+++++||...+.      +    
T Consensus        80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~----  149 (257)
T 3imf_A           80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD------A----  149 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS------C----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc------C----
Confidence               5677888876432211      145667899999999999887432   11245677776432221      0    


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                        .         + ....|+..|.        ++..+.+..|+++..++|+.|.++...........+..  ...+  ..
T Consensus       150 --~---------~-~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~--~~~~--~~  213 (257)
T 3imf_A          150 --G---------P-GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAK--RTIQ--SV  213 (257)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSH--HHHT--TS
T ss_pred             --C---------C-CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHH--HHHh--cC
Confidence              0         1 1123553222        22211124589999999999988421110000000000  0000  11


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  283 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s  283 (397)
                      |            .....+..++|.++++++...  ...|+++++.+|...+
T Consensus       214 p------------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          214 P------------LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             T------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             C------------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            1            112334556688887777543  2468999998876543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.56  E-value=7.8e-14  Score=126.26  Aligned_cols=213  Identities=13%  Similarity=0.100  Sum_probs=133.3

Q ss_pred             CCCEEEEEcCCCh--hHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVTGI--VGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGatGf--iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      .+|+||||||+|+  ||.+++++|++     +|++|++++|+....        .....++.++.+|++|.++++++++ 
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHE-----AGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHH-----CCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            4589999999999  99999999999     899999999874311        1112368899999999988777665 


Q ss_pred             ------cCCCeeEEEEeccc-----C---C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccC
Q 015961           94 ------QLTDVTHIFYVTWT-----N---R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~-----~---~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                            .+|.++|+|+....     .   .  +.....+++|+.++.++++++.....+-.+|+++||...+.      +
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------~  154 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL------V  154 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------C
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc------c
Confidence                  46778888765431     0   1  13456789999999999999987633335777776432221      0


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhh
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK  229 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~  229 (397)
                                     .+ ....|+..|.        ++... ...|+++..++|+.|..+-............   ....
T Consensus       155 ---------------~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~  214 (266)
T 3oig_A          155 ---------------MP-NYNVMGVAKASLDASVKYLAADL-GKENIRVNSISAGPIRTLSAKGISDFNSILK---DIEE  214 (266)
T ss_dssp             ---------------CT-TTHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCCCSGGGTTCTTHHHHHH---HHHH
T ss_pred             ---------------CC-CcchhHHHHHHHHHHHHHHHHHH-hhcCcEEEEEecCcccccccccccchHHHHH---HHHh
Confidence                           01 1122554322        22222 4568999999999998842222111111110   0111


Q ss_pred             hcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee
Q 015961          230 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  282 (397)
Q Consensus       230 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~  282 (397)
                        ..|+.            ...+..++|..+++++...  ...|+++++.+|-..
T Consensus       215 --~~~~~------------~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          215 --RAPLR------------RTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             --HSTTS------------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             --cCCCC------------CCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence              11110            1124455678887777542  356899999876543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.56  E-value=5.3e-14  Score=128.09  Aligned_cols=209  Identities=15%  Similarity=0.072  Sum_probs=129.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC-CCCCC------CC--CCCCceEEEccCCCH----HHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR-RPKPN------WN--ADHLVEYVQCDVSDP----EETQAK   91 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R-~~~~~------~~--~~~~v~~~~~Dl~d~----~~l~~~   91 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++| +....      ..  ...++.++.+|++|.    +++.++
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   84 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQ-----QGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDI   84 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHH
Confidence            357899999999999999999999     8999999999 53211      00  024688999999999    877776


Q ss_pred             Hc-------cCCCeeEEEEecccCC-----------------CcHHHHHHhHHHHHHHHHHHHcccC-CCc------ceE
Q 015961           92 LS-------QLTDVTHIFYVTWTNR-----------------STEAENCKINGSMFRNVLRAVIPNA-PNL------RHV  140 (397)
Q Consensus        92 ~~-------~~~~V~h~a~~~~~~~-----------------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~------~~~  140 (397)
                      ++       .+|.++|+|+......                 +..+..+++|+.++.++++++...- .+.      .+|
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~i  164 (276)
T 1mxh_A           85 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  164 (276)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence            65       6788999887532211                 2234578999999999999887642 123      678


Q ss_pred             EEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCC
Q 015961          141 CLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYS  213 (397)
Q Consensus       141 ~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~  213 (397)
                      +++||...+..            .         + ....|+..|.     ...+.  ....|+++.+++|+.|.++  ..
T Consensus       165 v~isS~~~~~~------------~---------~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~  220 (276)
T 1mxh_A          165 VNLCDAMTDLP------------L---------P-GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PA  220 (276)
T ss_dssp             EEECCGGGGSC------------C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SS
T ss_pred             EEECchhhcCC------------C---------C-CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--cc
Confidence            87775432211            0         1 1123654322     22211  1345899999999999995  21


Q ss_pred             cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          214 LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       214 ~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                       ..  .....  ...+  ..|+   +     +.   ..+..++|..+++++...  ...|+++++.+|.
T Consensus       221 -~~--~~~~~--~~~~--~~p~---~-----r~---~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          221 -MP--QETQE--EYRR--KVPL---G-----QS---EASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             -SC--HHHHH--HHHT--TCTT---T-----SC---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -CC--HHHHH--HHHh--cCCC---C-----CC---CCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence             11  11100  0111  1121   1     00   234556688887777542  2358889988764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.56  E-value=4.3e-15  Score=133.81  Aligned_cols=111  Identities=10%  Similarity=0.095  Sum_probs=85.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC----CCeeEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL----TDVTHIF  102 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~V~h~a  102 (397)
                      |+||||||+|+||++++++|++     +|++|++++|+.....   .  . +.+|++|.++++++++.+    |.++|+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~---~--~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~A   70 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEA-----AGHQIVGIDIRDAEVI---A--D-LSTAEGRKQAIADVLAKCSKGMDGLVLCA   70 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSSSSEE---C--C-TTSHHHHHHHHHHHHTTCTTCCSEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCchhhc---c--c-cccCCCCHHHHHHHHHHhCCCCCEEEECC
Confidence            6899999999999999999998     8999999999764321   1  1 678999999999888765    6677776


Q ss_pred             EecccCCCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccc
Q 015961          103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHY  149 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y  149 (397)
                      +... .....+..+++|+.|+.++++++...  ..+..+|+++||...|
T Consensus        71 g~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           71 GLGP-QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             CCCT-TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             CCCC-CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence            5322 13457888999999999999988643  2235788888876555

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.56  E-value=4.5e-14  Score=127.41  Aligned_cols=157  Identities=10%  Similarity=-0.023  Sum_probs=106.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC---CCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|++...      ..   ...++.++.+|++|++++.++++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELAR-----NGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence            357899999999999999999999     899999999975321      00   01268899999999998888776  


Q ss_pred             ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          ++|.++|+|+.....      .++.+..+++|+.|+.++++++...  ..+..+++++||...|..          
T Consensus        81 ~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  150 (260)
T 2z1n_A           81 RDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP----------  150 (260)
T ss_dssp             HHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------
T ss_pred             HHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC----------
Confidence                578888987643211      1145667899999997777666432  112578888875433211          


Q ss_pred             CCCCCCCCCCCCCCCCcchhH-----H---HHHHHHHhcCCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL-----E---DILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~-----e---~~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                        .         + ....|+.     +   +.++..+ ...|+++.+++|+.|+++
T Consensus       151 --~---------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~  193 (260)
T 2z1n_A          151 --W---------Q-DLALSNIMRLPVIGVVRTLALEL-APHGVTVNAVLPSLILTD  193 (260)
T ss_dssp             --C---------T-TBHHHHHHTHHHHHHHHHHHHHH-GGGTEEEEEEEECHHHHC
T ss_pred             --C---------C-CCchhHHHHHHHHHHHHHHHHHH-hhhCeEEEEEEECCcccc
Confidence              0         1 1122543     2   2222222 346899999999999984

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.56  E-value=2.6e-14  Score=128.84  Aligned_cols=214  Identities=12%  Similarity=0.022  Sum_probs=130.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      .+|+||||||+|+||++++++|++     +|++|+++ .|+....      . ....++.++.+|++|.++++++++.  
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAE-----NGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQID   77 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     89999887 6653211      0 0124688999999999888776653  


Q ss_pred             -----CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           95 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        95 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                           +|.++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+..          
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------  147 (258)
T 3oid_A           78 ETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY----------  147 (258)
T ss_dssp             HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB----------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC----------
Confidence                 577888876432211      134567899999999999888543  123457777775332210          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (397)
                                 .+ ....|+..|.     ...+.  ....|+++..++|+.|..+-....... ...  ......  ..|
T Consensus       148 -----------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~--~~~~~~--~~p  210 (258)
T 3oid_A          148 -----------LE-NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR-EDL--LEDARQ--NTP  210 (258)
T ss_dssp             -----------CT-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH-HHH--HHHHHH--HCT
T ss_pred             -----------CC-CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC-HHH--HHHHHh--cCC
Confidence                       01 1123654332     22221  134579999999999987421111110 011  000111  112


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  282 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~  282 (397)
                      +            ....+..++|.++++++....  ..|+++++.+|...
T Consensus       211 ~------------~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          211 A------------GRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             T------------SSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             C------------CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence            1            112344566888888776533  45899999887654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.56  E-value=2.3e-14  Score=130.82  Aligned_cols=211  Identities=12%  Similarity=0.048  Sum_probs=125.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|++|||||+|+||++++++|++     +|++|++++|+....       . ....++.++.+|++|.+++.++++   
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAA-----SGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            457899999999999999999999     899999999753211       0 012468899999999987776665   


Q ss_pred             ----cCCCeeEEEEecccC--------CCcHHHHHHhHHHHHHHHHHHHccc----C-CCcceEEEecCCcccccccccc
Q 015961           94 ----QLTDVTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN----A-PNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~----~-~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                          .+|.++|+|+.....        .++.+..+++|+.|+.++++++...    + ....+|+++||...+.      
T Consensus       103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------  176 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM------  176 (280)
T ss_dssp             HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------
T ss_pred             HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc------
Confidence                678899998752111        1145667789999999988887654    1 1135777777533221      


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHh
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC  228 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~  228 (397)
                      +.               + ....|+..|.        ++... ...|+++..++|+.|..+-.....   ...      .
T Consensus       177 ~~---------------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~---~~~------~  230 (280)
T 4da9_A          177 TS---------------P-ERLDYCMSKAGLAAFSQGLALRL-AETGIAVFEVRPGIIRSDMTAAVS---GKY------D  230 (280)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCBCC--------------------
T ss_pred             CC---------------C-CccHHHHHHHHHHHHHHHHHHHH-HHhCcEEEEEeecCCcCCchhhcc---hhH------H
Confidence            10               1 1122654222        22222 457899999999999873111100   000      0


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCe
Q 015961          229 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV  281 (397)
Q Consensus       229 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~  281 (397)
                      .....      ..   .......+..++|.++++++....  ..|+++++.+|..
T Consensus       231 ~~~~~------~~---~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          231 GLIES------GL---VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             --------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             HHHhh------cC---CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            00000      00   011123345666888888775543  4589999987754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.55  E-value=1e-13  Score=126.22  Aligned_cols=158  Identities=13%  Similarity=0.037  Sum_probs=107.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+.....       ....++.++.+|++|.++++++++    
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAE-----AGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     8999999999754320       012467899999999998877776    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|+|+......      +..+..+++|+.|+.++++++...-   ..-.+++++||...+.      +.   
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~------~~---  176 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHI------IN---  176 (276)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------CC---
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcc------cC---
Confidence               6788999877543211      1345667899999999998876541   1125677666432221      10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 .+.....|+..|.        ++... ...|+++..++|+.|..
T Consensus       177 -----------~~~~~~~Y~asKaa~~~l~~~la~e~-~~~gIrvn~v~PG~v~T  219 (276)
T 3r1i_A          177 -----------IPQQVSHYCTSKAAVVHLTKAMAVEL-APHQIRVNSVSPGYIRT  219 (276)
T ss_dssp             -----------CSSCCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCS
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHH-hhcCcEEEEEeeCCCcC
Confidence                       0111223654322        22222 34689999999999987

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.55  E-value=1.3e-13  Score=121.42  Aligned_cols=201  Identities=12%  Similarity=0.054  Sum_probs=125.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc---cCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---QLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~---~~~~V~h~  101 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+..             +|++|+++++++++   .+|.++|+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLES-----EHTIVHVASRQTG-------------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCS-----TTEEEEEESGGGT-------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEecCCcc-------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            357899999999999999999999     8999999998742             89999998888776   45667777


Q ss_pred             EEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961          102 FYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus       102 a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      |+......       ++.+..+++|+.++.++++++...-.+-.+++++||...+       ..              .+
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~--------------~~  125 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR-------KV--------------VA  125 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT-------SC--------------CT
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc-------cC--------------CC
Confidence            66431111       1456678999999999999987652222467777643222       10              01


Q ss_pred             CCCcchhHHH-----HHHHHHhcCC-CeeEEEEcCCceeeccCCCcchh-HHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961          175 APNFYYTLED-----ILFEEVEKKE-ELSWSVHRPDTIFGFSPYSLMNL-VGALCVYAAVCKHEGIPLRFPGTKAAWECY  247 (397)
Q Consensus       175 ~~~~~y~~e~-----~l~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  247 (397)
                       ....|+..|     +...+. .+. .+++..++|+.|..+-....... ...+  .....+  ..|+            
T Consensus       126 -~~~~Y~asK~a~~~~~~~la-~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~--~~~~------------  187 (223)
T 3uce_A          126 -NTYVKAAINAAIEATTKVLA-KELAPIRVNAISPGLTKTEAYKGMNADDRDAM--YQRTQS--HLPV------------  187 (223)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHH-HHHTTSEEEEEEECSBCSGGGTTSCHHHHHHH--HHHHHH--HSTT------------
T ss_pred             -CchHHHHHHHHHHHHHHHHH-HhhcCcEEEEEEeCCCcchhhhhcchhhHHHH--HHHHhh--cCCC------------
Confidence             122355432     222222 221 29999999999988422211111 1111  000111  1121            


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCCceeccCCCee
Q 015961          248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVF  282 (397)
Q Consensus       248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~  282 (397)
                      ....+..++|.++++++......|+++++.+|..+
T Consensus       188 ~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          188 GKVGEASDIAMAYLFAIQNSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             CCccCHHHHHHHHHHHccCCCCCCcEEEecCCeec
Confidence            11224455678888777766667999999887543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.55  E-value=8.8e-14  Score=126.74  Aligned_cols=157  Identities=15%  Similarity=0.048  Sum_probs=107.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|++++.++++    
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGK-----EGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            457999999999999999999999     899999999975321      0 012467889999999998877765    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccccccccccCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                         .+|.++|+|+......      ++.+..+++|+.|+.++++++...    ..+..+|+++||...+      ++   
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~------~~---  166 (277)
T 2rhc_B           96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK------QG---  166 (277)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGT------SC---
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccc------cC---
Confidence               5788889876432211      134667899999999999987653    0124678877753221      11   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                         .         + ....|+..|.     ...+.  ....|+++.+++|+.|.+
T Consensus       167 ---~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  208 (277)
T 2rhc_B          167 ---V---------V-HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVET  208 (277)
T ss_dssp             ---C---------T-TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCS
T ss_pred             ---C---------C-CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcC
Confidence               0         1 1122554332     22221  134689999999999988

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.55  E-value=6.8e-15  Score=131.46  Aligned_cols=157  Identities=11%  Similarity=0.065  Sum_probs=108.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-------EEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-------~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      |+|+||||||+|+||++++++|++     .|+       +|++++|++...      . ....++.++.+|++|++++..
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~-----~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   75 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFAR-----AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRR   75 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHH-----HTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----hcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHH
Confidence            357899999999999999999998     788       999999975321      0 012457899999999998877


Q ss_pred             HHc-------cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccc
Q 015961           91 KLS-------QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEA  155 (397)
Q Consensus        91 ~~~-------~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~  155 (397)
                      +++       .+|.|+|+|+.....      .++....+++|+.++.++++++...  ..+..+++++||...|..    
T Consensus        76 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----  151 (244)
T 2bd0_A           76 LTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA----  151 (244)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----
T ss_pred             HHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC----
Confidence            765       578899987753221      1145667899999999999987542  113568888775432210    


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----HH---HHHhcCCCeeEEEEcCCceeec
Q 015961          156 FGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LF---EEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       156 ~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~---~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                              .         + ....|+..|.     ..   ... ...|++++++||+.|+++
T Consensus       152 --------~---------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~  194 (244)
T 2bd0_A          152 --------F---------R-HSSIYCMSKFGQRGLVETMRLYA-RKCNVRITDVQPGAVYTP  194 (244)
T ss_dssp             --------C---------T-TCHHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCBCST
T ss_pred             --------C---------C-CCchhHHHHHHHHHHHHHHHHHh-hccCcEEEEEECCCccch
Confidence                    0         1 1122554332     22   222 457899999999999983

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.55  E-value=2.7e-14  Score=130.12  Aligned_cols=217  Identities=15%  Similarity=0.047  Sum_probs=132.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      +|+||||||+|+||++++++|++     +|++|++++|+.....    ....++.++.+|++|.++++++++       .
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAK-----NGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGR  101 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999     8999999999753210    012467889999999988877665       5


Q ss_pred             CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      +|.++|+|+......      +..+..+++|+.|+.++++++...  ..+..+|+++||...+..            .  
T Consensus       102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~--  167 (277)
T 4dqx_A          102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA------------I--  167 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC------------C--
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC------------C--
Confidence            788999877532211      134567889999999888887543  123457887775332211            0  


Q ss_pred             CCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec
Q 015961          167 TEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  238 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (397)
                             + ....|+..|.        ++... ...|+++..++|+.|..+-................ ......|    
T Consensus       168 -------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~----  233 (277)
T 4dqx_A          168 -------A-DRTAYVASKGAISSLTRAMAMDH-AKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRS-DFNARAV----  233 (277)
T ss_dssp             -------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHH-HHHTTST----
T ss_pred             -------C-CChhHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCcCcCchhhhhcccccchhHHHH-HHHhcCc----
Confidence                   1 1123654322        22222 34589999999999987310000000000000000 0000111    


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeee
Q 015961          239 GTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK  283 (397)
Q Consensus       239 g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s  283 (397)
                              .....+..++|.++++++....  ..|+++++.+|...+
T Consensus       234 --------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          234 --------MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             --------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             --------ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence                    1122345666888888775433  458999998876554

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.55  E-value=5.2e-14  Score=129.16  Aligned_cols=212  Identities=18%  Similarity=0.151  Sum_probs=131.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+||.+++++|++     .|++|++++|+....      .  ....++.++.+|++|.+++.++++   
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFAR-----AGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            457999999999999999999999     899999999976431      1  011468899999999988766654   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|.|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+     .++.   
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~-----~~~~---  186 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGP-----VTGY---  186 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTT-----TBBC---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhc-----cCCC---
Confidence                5678888877532211      145667899999999999988421  1124677777653211     0110   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----H---HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                  + ....|+..|.     .   +..+ ...|+++..++|+.|+++.....   ....  ...+.+  ..
T Consensus       187 ------------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~~~~~~---~~~~--~~~~~~--~~  245 (293)
T 3rih_A          187 ------------P-GWSHYGASKAAQLGFMRTAAIEL-APRGVTVNAILPGNILTEGLVDM---GEEY--ISGMAR--SI  245 (293)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCCHHHHHT---CHHH--HHHHHT--TS
T ss_pred             ------------C-CCHHHHHHHHHHHHHHHHHHHHH-hhhCeEEEEEecCCCcCcchhhc---cHHH--HHHHHh--cC
Confidence                        1 1123654322     2   2222 34689999999999998321110   0111  000111  22


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  282 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~  282 (397)
                      |+.            ...+..++|..+++++...  ...|+++++.+|...
T Consensus       246 p~~------------r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          246 PMG------------MLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             TTS------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCC------------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            211            1123455577777776532  345899999887543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.55  E-value=6.5e-14  Score=127.06  Aligned_cols=212  Identities=13%  Similarity=0.073  Sum_probs=131.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|++|||||+|+||.+++++|++     .|++|++++|+....        .....++.++.+|++|.++++++++   
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHD-----AGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVL   98 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHT-----TTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            357899999999999999999999     899999998543211        0112568899999999988777665   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|.|+......      ++....+++|+.++.++++++...  ..+..+|+++||...+.+.         
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  169 (269)
T 3gk3_A           99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA---------  169 (269)
T ss_dssp             HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------
T ss_pred             HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC---------
Confidence                6778888877532211      145667899999999998887542  1124678877754322110         


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                  + ....|+..|.        ++..+ ...|+++..++|+.|..+-....   ....      ..  . 
T Consensus       170 ------------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~---~~~~------~~--~-  223 (269)
T 3gk3_A          170 ------------F-GQANYASAKAGIHGFTKTLALET-AKRGITVNTVSPGYLATAMVEAV---PQDV------LE--A-  223 (269)
T ss_dssp             ------------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCTTTTC------------------C-
T ss_pred             ------------C-CcchHHHHHHHHHHHHHHHHHHh-hhcCCEEEEEecCcccchhhhhh---chhH------HH--H-
Confidence                        0 1123664332        22222 34689999999999987311110   0000      00  0 


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  282 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~  282 (397)
                      . ...  ..   ......+..++|..+++++....  ..|+++++.+|..+
T Consensus       224 ~-~~~--~~---~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          224 K-ILP--QI---PVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             C-SGG--GC---TTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             H-hhh--cC---CcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence            0 000  00   11122345666888888776543  45899999987654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.55  E-value=1e-14  Score=129.42  Aligned_cols=157  Identities=12%  Similarity=-0.000  Sum_probs=102.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      |+|+||||||+|+||++++++|++     +|++|++++|++...  . ....++.++.+|++|.+++.++++       .
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHA-----KGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999998     899999999975321  0 001267899999999988777664       5


Q ss_pred             CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        95 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      +|.|+|+|+.....      .++....+++|+.++.++++++...  ..+..+|+++||...|..               
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------  143 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP---------------  143 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC---------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC---------------
Confidence            67899987643211      1145667899999997666654322  123678888875332210               


Q ss_pred             CCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          167 TEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                           . + ....|+..|.     ...+.  ....|++++++||+.+..
T Consensus       144 -----~-~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  185 (234)
T 2ehd_A          144 -----F-K-GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDT  185 (234)
T ss_dssp             -----C-T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----
T ss_pred             -----C-C-CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcC
Confidence                 0 1 1123654333     22211  134689999999998876

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.55  E-value=3.6e-14  Score=129.44  Aligned_cols=218  Identities=14%  Similarity=0.046  Sum_probs=135.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc---
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ..+|+||||||+|+||.+++++|++     .|++|++++|+....       .....++.++.+|++|.+++..+++   
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAR-----EGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321       0112467889999999988777665   


Q ss_pred             ----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                          .+|.++|+|+......       ++.+..+++|+.|+.++++++...  ..+-.+++++||...+.     .+   
T Consensus        81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----~~---  152 (280)
T 3tox_A           81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT-----AG---  152 (280)
T ss_dssp             HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT-----BC---
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc-----CC---
Confidence                5788899877432211       145678899999999999987653  11235777776533220     00   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcc-hhHHHHHHHHHHhhhc
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHE  231 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~  231 (397)
                                  .+ ....|+..|.        ++..+ ...|+++..++|+.|..+...... .........  +..  
T Consensus       153 ------------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~--  214 (280)
T 3tox_A          153 ------------FA-GVAPYAASKAGLIGLVQALAVEL-GARGIRVNALLPGGTDTPANFANLPGAAPETRGF--VEG--  214 (280)
T ss_dssp             ------------CT-TCHHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHH--HHT--
T ss_pred             ------------CC-CchhHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEECCCCCchhhhhccccCHHHHHH--Hhc--
Confidence                        01 1122654322        22222 356899999999999984211100 000111000  011  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeeh
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  284 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~  284 (397)
                      ..|+            ....+..++|.++++++...  ...|+++++.+|..++.
T Consensus       215 ~~p~------------~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          215 LHAL------------KRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             TSTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             cCcc------------CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            1121            11234556688888877543  34589999998765544

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.55  E-value=2.7e-14  Score=128.45  Aligned_cols=210  Identities=11%  Similarity=0.023  Sum_probs=127.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+.....    ....++.++.+|++|++++.++++       
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVA-----AGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999     8999999999753210    001357789999999998877766       


Q ss_pred             cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      ++|.++|+|+.....      .++.+..+++|+.|+.++.+++...  ..+..+|+++||...+..            . 
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~-  145 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG------------L-  145 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------C-
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC------------C-
Confidence            688899987753221      1145667899999997655544322  112567888775432211            0 


Q ss_pred             CCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec
Q 015961          166 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  238 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (397)
                              + ....|+..|.     ...+.  ....|+++.++||+.|+++.       ...+      .......+  .
T Consensus       146 --------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-------~~~~------~~~~~~~~--~  201 (254)
T 1hdc_A          146 --------A-LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-------TAET------GIRQGEGN--Y  201 (254)
T ss_dssp             --------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHH------TCCCSTTS--C
T ss_pred             --------C-CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc-------cccc------chhHHHHH--H
Confidence                    1 1122554322     22211  13468999999999998831       0000      00000000  0


Q ss_pred             CCccccceeeecc-cHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          239 GTKAAWECYSIAS-DADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       239 g~~~~~~~~~~~~-da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      . ..   ...... +..++|..+++++..+  ...|+.+++.+|.
T Consensus       202 ~-~~---p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  242 (254)
T 1hdc_A          202 P-NT---PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             T-TS---TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             h-cC---CCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            0 00   111223 5566788888877543  3458889888764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.55  E-value=6.5e-14  Score=126.90  Aligned_cols=209  Identities=16%  Similarity=0.145  Sum_probs=130.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc-
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      ..|+|+||||||+|+||++++++|++     +|++|+++.++....       . ....++.++.+|++|.+++.++++ 
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~-----~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAA-----DGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            34678999999999999999999999     899998776543211       0 012578899999999998877665 


Q ss_pred             ------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCC
Q 015961           94 ------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                            .+|.++|.|+......      ++....+++|+.++.++++++...   .....+++++||...+.      +.
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------~~  171 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM------GN  171 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH------CC
T ss_pred             HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc------CC
Confidence                  5777888877533211      145677899999999999887321   12246778777543221      10


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhh
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH  230 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~  230 (397)
                                     + ....|+..|.        ++... ...|+++.+++|+.|..+-....   .....   ...+ 
T Consensus       172 ---------------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~---~~~~~---~~~~-  227 (267)
T 4iiu_A          172 ---------------R-GQVNYSAAKAGIIGATKALAIEL-AKRKITVNCIAPGLIDTGMIEME---ESALK---EAMS-  227 (267)
T ss_dssp             ---------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSTTCCCC---HHHHH---HHHH-
T ss_pred             ---------------C-CCchhHHHHHHHHHHHHHHHHHH-hhcCeEEEEEEEeeecCCccccc---HHHHH---HHHh-
Confidence                           0 1123664333        22222 34589999999999988322111   11110   0111 


Q ss_pred             cCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCC
Q 015961          231 EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNG  279 (397)
Q Consensus       231 ~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~  279 (397)
                       ..|+.            ...+..++|.++++++...  ...|+++++.+|
T Consensus       228 -~~p~~------------~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          228 -MIPMK------------RMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             -TCTTC------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cCCCC------------CCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence             22211            1224556688887776542  345889998765

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.54  E-value=7.8e-14  Score=126.76  Aligned_cols=157  Identities=13%  Similarity=0.043  Sum_probs=106.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|.....     . ....++.++.+|++|.+++.++.+     
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYAR-----AGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT  104 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence            468999999999999999999999     899999999764211     0 112467899999999987766543     


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.++|.|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+..            .
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~------------~  172 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG------------G  172 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------C
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC------------C
Confidence             5788888877543211      144667899999999999987432  112467787775332211            0


Q ss_pred             CCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeec
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                               + ....|+..|.        ++... ...|+++..++|+.|..+
T Consensus       173 ---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~  214 (273)
T 3uf0_A          173 ---------R-NVAAYAASKHAVVGLTRALASEW-AGRGVGVNALAPGYVVTA  214 (273)
T ss_dssp             ---------S-SCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSG
T ss_pred             ---------C-CChhHHHHHHHHHHHHHHHHHHH-hhcCcEEEEEEeCCCcCC
Confidence                     1 1123654322        22222 346899999999999983

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.54  E-value=1.7e-14  Score=134.36  Aligned_cols=224  Identities=10%  Similarity=0.023  Sum_probs=139.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC----------CCC------C-CCCCCceEEEccCCCHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP----------KPN------W-NADHLVEYVQCDVSDPEET   88 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~----------~~~------~-~~~~~v~~~~~Dl~d~~~l   88 (397)
                      +|+||||||+|+||.+++++|++     +|++|++++|+.          ...      . ....++.++.+|++|.+++
T Consensus        27 gk~vlVTGas~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAA-----EGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            57899999999999999999999     899999999862          100      0 0123577899999999888


Q ss_pred             HHHHc-------cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCC--------CcceEEEecCCc
Q 015961           89 QAKLS-------QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAP--------NLRHVCLQTGTK  147 (397)
Q Consensus        89 ~~~~~-------~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~--------~~~~~~~~s~~~  147 (397)
                      .++++       .+|.++|+|+.....      .++.+..+++|+.|+.++++++.....        .-.+|+++||..
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~  181 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA  181 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHH
Confidence            77665       678889987753321      114566789999999999988754310        014788777543


Q ss_pred             cccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----H---HHHHhcCCCeeEEEEcCCceeeccCCCcchhHH
Q 015961          148 HYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVG  219 (397)
Q Consensus       148 ~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~  219 (397)
                      .+...                     + ....|+..|.     .   +..+ ...|+++..++|+ +..+-......  .
T Consensus       182 ~~~~~---------------------~-~~~~Y~asKaal~~l~~~la~e~-~~~gI~vn~v~PG-~~t~~~~~~~~--~  235 (322)
T 3qlj_A          182 GLQGS---------------------V-GQGNYSAAKAGIATLTLVGAAEM-GRYGVTVNAIAPS-ARTRMTETVFA--E  235 (322)
T ss_dssp             HHHCB---------------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEC-TTSCCSCCSCC--C
T ss_pred             HccCC---------------------C-CCccHHHHHHHHHHHHHHHHHHh-cccCcEEEEecCC-CCCccchhhhh--h
Confidence            33110                     0 1122654322     2   2222 3468999999998 54311111000  0


Q ss_pred             HHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee---------------
Q 015961          220 ALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF---------------  282 (397)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~---------------  282 (397)
                      ..          ..+..    .   ....+   ..++|.++++++...  ...|+++++.+|...               
T Consensus       236 ~~----------~~~~~----~---~~~~~---pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~  295 (322)
T 3qlj_A          236 MM----------ATQDQ----D---FDAMA---PENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGA  295 (322)
T ss_dssp             -------------------------CCTTC---GGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSS
T ss_pred             hh----------hcccc----c---cCCCC---HHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccC
Confidence            00          00000    0   01112   333467777766432  245899999887755               


Q ss_pred             --ehHHHHHHHHHHhCCCCC
Q 015961          283 --KWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       283 --s~~el~~~i~~~~g~~~~  300 (397)
                        ++.|+++.+.+.+|.+.+
T Consensus       296 ~~~~~el~~~~~~~~~~~~~  315 (322)
T 3qlj_A          296 RWDPAELGPVVADLLGKARP  315 (322)
T ss_dssp             CCCGGGHHHHHHHHHHHSCC
T ss_pred             CCCHHHHHHHHHHHhhccCC
Confidence              679999999999986543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.54  E-value=2.5e-13  Score=123.23  Aligned_cols=209  Identities=12%  Similarity=0.056  Sum_probs=131.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|.++++++++   
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLAL-----EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899999997764211       0 012467899999999998877765   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                          .+|.++|.|+......      ++.+..+++|+.|+.++++++...-.+-.+++++||...      ..++     
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~------~~~~-----  173 (271)
T 3v2g_A          105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLA------ELVP-----  173 (271)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGG------TCCC-----
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhh------ccCC-----
Confidence                6788999877532211      145677899999999999988765333457777764211      1110     


Q ss_pred             CCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                               .+ ....|+..|.        ++..+ ...|+++..++|+.|..+-..........+      .+  ..|+
T Consensus       174 ---------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~------~~--~~~~  234 (271)
T 3v2g_A          174 ---------WP-GISLYSASKAALAGLTKGLARDL-GPRGITVNIVHPGSTDTDMNPADGDHAEAQ------RE--RIAT  234 (271)
T ss_dssp             ---------ST-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCSSSSCSSCSSHHHH------HH--TCTT
T ss_pred             ---------CC-CchHHHHHHHHHHHHHHHHHHHh-hhhCeEEEEEecCCCcCCcccccchhHHHH------Hh--cCCC
Confidence                     01 1223664332        22222 345899999999999884221111111111      11  1221


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCC
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGD  280 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~  280 (397)
                         +      .   ..+..++|..+++++..  ....|+++++.+|.
T Consensus       235 ---~------r---~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          235 ---G------S---YGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             ---S------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ---C------C---CCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence               1      1   22345567777777643  23458889887763

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.54  E-value=3.5e-14  Score=127.04  Aligned_cols=209  Identities=17%  Similarity=0.082  Sum_probs=128.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC-CCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR-RPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R-~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++| ++...      . ....++.++.+|++|++++.++++   
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAK-----QGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTV   77 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            357999999999999999999999     8999999998 43210      0 012467889999999998877765   


Q ss_pred             ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          ++|.++|+|+.....      .++.+..+++|+.|+.++++++...  ..+..+++++||...+.      +.   
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~~---  148 (246)
T 2uvd_A           78 DVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT------GN---  148 (246)
T ss_dssp             HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------CC---
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC------CC---
Confidence                678899987753221      1145667899999977776665432  11256888887543221      10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                  + ....|+..|.        ++... ...|+++.+++|+.|..+-........  ...   +..  ..
T Consensus       149 ------------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~---~~~--~~  207 (246)
T 2uvd_A          149 ------------P-GQANYVAAKAGVIGLTKTSAKEL-ASRNITVNAIAPGFIATDMTDVLDENI--KAE---MLK--LI  207 (246)
T ss_dssp             ------------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBGGGCSSCCCTTH--HHH---HHH--TC
T ss_pred             ------------C-CCchHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEeccccCcchhhcCHHH--HHH---HHh--cC
Confidence                        0 1122554332        22222 356899999999999874211111100  000   011  11


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      |+   +         ...+..++|..+++++..+  ...|+++++.+|.
T Consensus       208 p~---~---------~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          208 PA---A---------QFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             TT---C---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CC---C---------CCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            21   1         1234555678877776542  2458888887764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.54  E-value=2.9e-13  Score=123.33  Aligned_cols=157  Identities=15%  Similarity=0.069  Sum_probs=104.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-------CCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-------ADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-------~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+......       ...++.++.+|++|.+++.++++.   
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQ-----AGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHH-----HTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence            357999999999999999999998     89999999997643100       023678999999999988777654   


Q ss_pred             ----CCCeeEEEEeccc---C--CC---cHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecCCccccccccccCC
Q 015961           95 ----LTDVTHIFYVTWT---N--RS---TEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        95 ----~~~V~h~a~~~~~---~--~~---~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                          +|.|+|+|+....   .  ..   +....+++|+.+    ++++++.+++.+  ..+|+++||...+.      + 
T Consensus       108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~------~-  178 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG--KGSLIITSSISGKI------V-  178 (279)
T ss_dssp             HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECCCTTSC------C-
T ss_pred             HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCeEEEECchHhcc------C-
Confidence                7778888764322   0  11   345678899999    566777766543  56788777532211      0 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~  209 (397)
                           .      +  +.....|+.     +.+...+..  ...+ ++.+++|+.+..+
T Consensus       179 -----~------~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~  222 (279)
T 3ctm_A          179 -----N------I--PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTD  222 (279)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSST
T ss_pred             -----C------C--CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccc
Confidence                 0      0  011123554     333333221  2356 9999999999873

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.54  E-value=1.5e-13  Score=124.36  Aligned_cols=212  Identities=13%  Similarity=0.035  Sum_probs=129.1

Q ss_pred             CCCCEEEEEcCCCh-hHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961           24 SYQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        24 ~~~~~ILVtGatGf-iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      ..+|+||||||+|+ ||++++++|++     +|++|++++|+....        .....++.++.+|++|.+++.++++ 
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALL-----EGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence            34689999999985 99999999999     899999999975321        1112478999999999988877665 


Q ss_pred             ------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCC
Q 015961           94 ------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                            .+|.++|+|+......      ++.+..+++|+.++.++++++...   ..+..+++++||...+.      + 
T Consensus        95 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------~-  167 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR------A-  167 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC------C-
T ss_pred             HHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC------C-
Confidence                  4677888877533211      144667899999999999987654   11346777776432221      0 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                           .         + ....|+..|.     ...+.  ....|+++..++|+.|..+-......  ...      ....
T Consensus       168 -----~---------~-~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~------~~~~  224 (266)
T 3o38_A          168 -----Q---------H-SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--SEL------LDRL  224 (266)
T ss_dssp             -----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------
T ss_pred             -----C---------C-CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--HHH------HHHH
Confidence                 0         1 1223654322     22211  13468999999999998731111000  000      0000


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      ..       ..   ......+..++|..+++++...  ...|+++++.+|.
T Consensus       225 ~~-------~~---~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          225 AS-------DE---AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             ---------CC---TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             Hh-------cC---CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            00       00   1112234556688888877542  3458899988763

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.54  E-value=3.1e-14  Score=128.29  Aligned_cols=213  Identities=15%  Similarity=0.069  Sum_probs=130.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHc------cCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS------QLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~------~~~~   97 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+..... ....++.++.+|++|.+++..+++      .+|.
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLD-----AGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHH-----HTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCE
Confidence            357899999999999999999999     8999999999643210 012468899999999998877765      5666


Q ss_pred             eeEEEEecc----------cCCCcHHHHHHhHHHHHHHHHHHHcccC----------CCcceEEEecCCccccccccccC
Q 015961           98 VTHIFYVTW----------TNRSTEAENCKINGSMFRNVLRAVIPNA----------PNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        98 V~h~a~~~~----------~~~~~~~~~~~~nv~gt~~ll~a~~~~~----------~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                      ++|+|+...          ...++.+..+++|+.++.++++++...-          ..-.+++++||...+...     
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  157 (257)
T 3tl3_A           83 VVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ-----  157 (257)
T ss_dssp             EEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH-----
T ss_pred             EEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC-----
Confidence            777755321          1112456788999999999999886541          123467777653322110     


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhh
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK  229 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~  229 (397)
                                      + ....|+..|.        ++..+ ...|+++..++|+.|..+-.....   ....  .....
T Consensus       158 ----------------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~---~~~~--~~~~~  214 (257)
T 3tl3_A          158 ----------------I-GQAAYSASKGGVVGMTLPIARDL-ASHRIRVMTIAPGLFDTPLLASLP---EEAR--ASLGK  214 (257)
T ss_dssp             ----------------H-HHHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCTTC---C---HHHH--HHHHH
T ss_pred             ----------------C-CCccHHHHHHHHHHHHHHHHHHh-cccCcEEEEEEecCccChhhhhcc---HHHH--HHHHh
Confidence                            0 1122554322        22222 356899999999999873211111   1110  00111


Q ss_pred             hcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeee
Q 015961          230 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFK  283 (397)
Q Consensus       230 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s  283 (397)
                        ..|.  ++         ...+..++|..+++++..+...|+++++.+|..++
T Consensus       215 --~~~~--~~---------r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          215 --QVPH--PS---------RLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             --TSSS--SC---------SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             --cCCC--CC---------CccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence              1121  11         12344556888888877766779999998876543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.53  E-value=4.1e-16  Score=145.56  Aligned_cols=165  Identities=12%  Similarity=0.068  Sum_probs=107.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-------EEEEEeCCCC--C--C---CCCCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARRPK--P--N---WNADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-------~V~~l~R~~~--~--~---~~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      +++||+||||+||||++|+..|++     +|+       +|+++++.+.  .  .   ...+..+.++ +|+.+.+++.+
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~   76 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKV   76 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHH
Confidence            346899999999999999999998     665       8999998631  0  0   0001122333 67776666778


Q ss_pred             HHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCCCCCCCC-C
Q 015961           91 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT-E  168 (397)
Q Consensus        91 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~-E  168 (397)
                      +++++|.|+|+|+.......++.+++++|+.+++++++++++.+ ++. +++.+|+      +.....       ++. |
T Consensus        77 a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~-~vvv~sn------p~~~~~-------~~~~~  142 (327)
T 1y7t_A           77 AFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDV-KVLVVGN------PANTNA-------LIAYK  142 (327)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTC-EEEECSS------SHHHHH-------HHHHH
T ss_pred             HhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEeCC------chhhhH-------HHHHH
Confidence            89999999999886544445678899999999999999999874 433 3343332      110001       111 1


Q ss_pred             CC-CCCCCCCc---chhHHHHHHHHHhcCCCeeEEEEcCCceeecc
Q 015961          169 DM-PRLDAPNF---YYTLEDILFEEVEKKEELSWSVHRPDTIFGFS  210 (397)
Q Consensus       169 ~~-p~~~~~~~---~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~  210 (397)
                      .. +..|...|   ....|++...+. +..|++.+++||.+|||+.
T Consensus       143 ~~~~~~p~~~yg~tkl~~er~~~~~a-~~~g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          143 NAPGLNPRNFTAMTRLDHNRAKAQLA-KKTGTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHH-HHHTCCGGGEECCEEEBCS
T ss_pred             HcCCCChhheeccchHHHHHHHHHHH-HHhCcChhheeeeEEEcCC
Confidence            11 11122221   122366555554 6678999999999999943

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.53  E-value=2.5e-14  Score=130.37  Aligned_cols=217  Identities=17%  Similarity=0.100  Sum_probs=133.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....      .  ....++.++.+|++|.++++++++   
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMR-----HGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0  012468899999999988777665   


Q ss_pred             ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|+|+.....      .++.+..+++|+.|+.++++++...-  .+..+|+++||...+.      +.   
T Consensus       101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~~---  171 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR------GQ---  171 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH------TC---
T ss_pred             HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC------CC---
Confidence                577788887643211      11456788999999999999875421  1235777777543321      10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                  + ....|+..|        .++..+ ...|+++..++|+.|.++  .........-........  ..
T Consensus       172 ------------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~t~--~~~~~~~~~~~~~~~~~~--~~  233 (277)
T 4fc7_A          172 ------------A-LQVHAGSAKAAVDAMTRHLAVEW-GPQNIRVNSLAPGPISGT--EGLRRLGGPQASLSTKVT--AS  233 (277)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBSSS--HHHHHHSCCHHHHHHHHH--TS
T ss_pred             ------------C-CcHHHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEECCEecc--hhhhhccCCHHHHHHHhc--cC
Confidence                        0 112355322        222222 346899999999999873  100000000000000011  22


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeehH
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWK  285 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~~  285 (397)
                      |+.            .+.+..++|.++++++...  ...|+++++.+|..+++.
T Consensus       234 p~~------------r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          234 PLQ------------RLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTFP  275 (277)
T ss_dssp             TTS------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHCC
T ss_pred             CCC------------CCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCCC
Confidence            211            1224555688888777542  356899999887665544

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.53  E-value=1e-14  Score=131.71  Aligned_cols=206  Identities=15%  Similarity=0.071  Sum_probs=129.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+.....    .....+.++.+|++|++++.++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVA-----EGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            458999999999999999999998     8999999999753210    001247789999999998887776       


Q ss_pred             cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      ++|.++|+|+.....    .  ++.+..+++|+.|+.++++++...  ..+..+++++||...|.+            . 
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~-  147 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG------------T-  147 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------C-
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC------------C-
Confidence            688899988753221    1  145667899999997666655332  112567887775432211            0 


Q ss_pred             CCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec
Q 015961          166 FTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  238 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (397)
                              + ....|+..|     +...+.  ....|++++++||+.|+++...    ..         .....   ..+
T Consensus       148 --------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~---------~~~~~---~~~  202 (260)
T 1nff_A          148 --------V-ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----WV---------PEDIF---QTA  202 (260)
T ss_dssp             --------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----TS---------CTTCS---CCS
T ss_pred             --------C-CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc----cc---------hhhHH---hCc
Confidence                    1 112255432     222221  1346899999999999983211    00         00000   000


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          239 GTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       239 g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                              .....+..++|.++++++...  ...|++|++.+|..
T Consensus       203 --------~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          203 --------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             --------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --------cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence                    112234566688887776543  23488999988754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.53  E-value=7.7e-14  Score=127.34  Aligned_cols=211  Identities=11%  Similarity=0.034  Sum_probs=131.0

Q ss_pred             CCEEEEEcCCCh--hHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C-CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961           26 QSVALIVGVTGI--VGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLSQ----   94 (397)
Q Consensus        26 ~~~ILVtGatGf--iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~l~~~~~~----   94 (397)
                      +|+||||||+|+  ||.+++++|++     .|++|++++|+....    . ....++.++.+|++|.+++.++++.    
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHR-----EGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHH-----TTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHH-----cCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999988  99999999999     899999999986111    0 1124588999999999888776654    


Q ss_pred             ---CCCeeEEEEeccc-----------CCCcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCC
Q 015961           95 ---LTDVTHIFYVTWT-----------NRSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        95 ---~~~V~h~a~~~~~-----------~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                         +|.++|+|+....           ..+.....+++|+.++.++++++... ..+-.+++++||...+.      +  
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~------~--  172 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK------A--  172 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS------C--
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc------C--
Confidence               5778888765332           11144567899999999999988764 22245777776432221      0  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                                   .+ ....|+..|.        ++... ...|+++..++|+.|..+-.............   ...  
T Consensus       173 -------------~~-~~~~Y~asKaal~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~---~~~--  232 (280)
T 3nrc_A          173 -------------MP-SYNTMGVAKASLEATVRYTALAL-GEDGIKVNAVSAGPIKTLAASGISNFKKMLDY---NAM--  232 (280)
T ss_dssp             -------------CT-TTHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCCCCSGGGGCTTHHHHHHH---HHH--
T ss_pred             -------------CC-CchhhHHHHHHHHHHHHHHHHHH-HHcCcEEEEEeeccccchhhhcCcchHHHHHH---HHh--
Confidence                         01 1122554322        22222 34689999999999988321111111111100   111  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                      ..|+.            ...+..++|.++++++...  ...|+++++.+|..
T Consensus       233 ~~p~~------------~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          233 VSPLK------------KNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             HSTTC------------SCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCC------------CCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence            11211            1223456688887776542  35689999988754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.53  E-value=5.7e-14  Score=126.40  Aligned_cols=212  Identities=16%  Similarity=0.136  Sum_probs=127.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc-
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      +..+|+||||||+|+||++++++|++     +|++|++++++.....        ....++.++.+|++|.++++++++ 
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHK-----DGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHH-----TTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH
Confidence            44568999999999999999999999     8999999885433210        012468899999999988877765 


Q ss_pred             ------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961           94 ------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                            .+|.++|.|+......      ++.+..+++|+.|+.++++++...  ..+..+++++||...+.      +. 
T Consensus        85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~~-  157 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK------GQ-  157 (256)
T ss_dssp             HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG------SC-
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc------CC-
Confidence                  4566888776432211      145668899999988887776432  11246788777533221      10 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHH-----H---HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                                    + ....|+..|.     .   +... ...|+++.+++|+.|..+-.....   ....  ..+.+  
T Consensus       158 --------------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~---~~~~--~~~~~--  214 (256)
T 3ezl_A          158 --------------F-GQTNYSTAKAGIHGFTMSLAQEV-ATKGVTVNTVSPGYIGTDMVKAIR---PDVL--EKIVA--  214 (256)
T ss_dssp             --------------S-CCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCHHHHTSC---HHHH--HHHHH--
T ss_pred             --------------C-CCcccHHHHHHHHHHHHHHHHHH-HHhCCEEEEEEECcccCccccccC---HHHH--HHHHh--
Confidence                          1 1223664333     2   2222 346899999999999873111111   1110  00111  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCe
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDV  281 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~  281 (397)
                      ..|+            ....+..++|.++++++..  ....|+++++.+|..
T Consensus       215 ~~~~------------~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          215 TIPV------------RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             HSTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             cCCC------------CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEe
Confidence            1121            0122345567777777643  235689999987754

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.53  E-value=2.1e-14  Score=130.26  Aligned_cols=210  Identities=18%  Similarity=0.121  Sum_probs=131.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|.++++++++     
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELAR-----RGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999     899999999975321      0 012367889999999988877665     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.++|+|+......      ++.+..+++|+.|+.++++++...  ..+-.+|+++||...+.      +.     
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~~-----  171 (270)
T 3ftp_A          103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA------GN-----  171 (270)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------CC-----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC------CC-----
Confidence              5788899877533211      145667899999999999987643  11235677777543221      10     


Q ss_pred             CCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                                + ....|+..|.        ++..+ ...|+++.+++|+.|..+-.....   ...  ...+.  ...|+
T Consensus       172 ----------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~---~~~--~~~~~--~~~p~  232 (270)
T 3ftp_A          172 ----------P-GQVNYAAAKAGVAGMTRALAREI-GSRGITVNCVAPGFIDTDMTKGLP---QEQ--QTALK--TQIPL  232 (270)
T ss_dssp             ----------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSHHHHHSC---HHH--HHHHH--TTCTT
T ss_pred             ----------C-CchhHHHHHHHHHHHHHHHHHHH-hhhCeEEEEEEeCCCcCcchhhcC---HHH--HHHHH--hcCCC
Confidence                      0 1123664333        22222 346899999999999873100000   000  00001  11121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCee
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVF  282 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~  282 (397)
                                  ....+..++|.++++++..  ....|+++++.+|..+
T Consensus       233 ------------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          233 ------------GRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             ------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             ------------CCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence                        1123445567887777643  2346899999887544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.53  E-value=2.7e-14  Score=129.77  Aligned_cols=170  Identities=11%  Similarity=0.005  Sum_probs=108.5

Q ss_pred             cccccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCC
Q 015961           12 ARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSD   84 (397)
Q Consensus        12 ~~~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d   84 (397)
                      .++.|-+......++|+||||||+|+||++++++|++     .|++|++++|++...      . ....++.++.+|++|
T Consensus        17 ~~~~~~~~~~~~l~~k~vlITGasggIG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~   91 (272)
T 1yb1_A           17 YFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAK-----LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN   91 (272)
T ss_dssp             --------CCCCCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             eeccccCCcccccCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC
Confidence            3444444344444568999999999999999999999     899999999975321      0 012468899999999


Q ss_pred             HHHHHHHHc-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccc
Q 015961           85 PEETQAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHY  149 (397)
Q Consensus        85 ~~~l~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y  149 (397)
                      .+++.++++       .+|.|+|+|+......      ++....+++|+.++.++++++...  ..+..+|+++||...|
T Consensus        92 ~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  171 (272)
T 1yb1_A           92 REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH  171 (272)
T ss_dssp             HHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C
T ss_pred             HHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhc
Confidence            988877665       5788999877533211      134567899999988877766442  1235788887754322


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCcchhHH-----HHHHHHHh--c---CCCeeEEEEcCCceee
Q 015961          150 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE-----DILFEEVE--K---KEELSWSVHRPDTIFG  208 (397)
Q Consensus       150 ~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e-----~~l~~~~~--~---~~g~~~~ilRp~~v~G  208 (397)
                      ...                     + ....|+..     .+...+..  .   ..|++++++||+.|.+
T Consensus       172 ~~~---------------------~-~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t  218 (272)
T 1yb1_A          172 VSV---------------------P-FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT  218 (272)
T ss_dssp             CCH---------------------H-HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH
T ss_pred             CCC---------------------C-CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccC
Confidence            110                     0 11225543     22222221  1   4589999999999887

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.53  E-value=1.2e-13  Score=123.46  Aligned_cols=207  Identities=17%  Similarity=0.147  Sum_probs=129.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHcc-------CC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQ-------LT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~-------~~   96 (397)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....  .....++.++.+|++|++++.++++.       +|
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   79 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAK-----EGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLD   79 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999998     899999999975321  00001378899999999888776654       78


Q ss_pred             CeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  168 (397)
Q Consensus        97 ~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E  168 (397)
                      .++|+|+.....      .++.+..+++|+.++.++++++...  ..+..+++++||.. +      ++.          
T Consensus        80 ~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~------~~~----------  142 (245)
T 1uls_A           80 GVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-Y------LGN----------  142 (245)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-G------GCC----------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-h------cCC----------
Confidence            888887643211      1134567899999999998887654  22357888877543 1      110          


Q ss_pred             CCCCCCCCCcchhHH--------HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCC
Q 015961          169 DMPRLDAPNFYYTLE--------DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT  240 (397)
Q Consensus       169 ~~p~~~~~~~~y~~e--------~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~  240 (397)
                           + ....|+..        +.++... ...|+++.+++|+.|..+-.....   ...  ......  ..|+   + 
T Consensus       143 -----~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~---~~~--~~~~~~--~~p~---~-  204 (245)
T 1uls_A          143 -----L-GQANYAASMAGVVGLTRTLALEL-GRWGIRVNTLAPGFIETRMTAKVP---EKV--REKAIA--ATPL---G-  204 (245)
T ss_dssp             -----T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCTTTSSSC---HHH--HHHHHH--TCTT---C-
T ss_pred             -----C-CchhHHHHHHHHHHHHHHHHHHH-hHhCeEEEEEEeCcCcCcchhhcC---HHH--HHHHHh--hCCC---C-
Confidence                 0 11225532        2222222 456899999999999873211111   111  000111  1121   1 


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          241 KAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       241 ~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                           .   ..+..++|..+++++..+  ...|+.+++.+|.
T Consensus       205 -----~---~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          205 -----R---AGKPLEVAYAALFLLSDESSFITGQVLFVDGGR  238 (245)
T ss_dssp             -----S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             -----C---CcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence                 1   234455677777776543  3458888887764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.53  E-value=6.4e-14  Score=127.57  Aligned_cols=217  Identities=11%  Similarity=0.003  Sum_probs=132.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+.....    ....++.++.+|++|.+++.++++       
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLAD-----EGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999     8999999999753210    002467899999999988776665       


Q ss_pred             cCCCeeEEEEecccC---C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN---R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~---~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.++|+|+.....   .   ++.+..+++|+.|+.++++++...  ..+-.+|+++||...+.      +        
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~------~--------  168 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV------A--------  168 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS------C--------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------C--------
Confidence            578888887753221   1   145677899999999998887653  12245677776532221      0        


Q ss_pred             CCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          166 FTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                             .+ ....|+..|.        ++... ...|+++.+++|+.|.++-.       ...      ......... 
T Consensus       169 -------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~~~-------~~~------~~~~~~~~~-  225 (277)
T 3gvc_A          169 -------VG-GTGAYGMSKAGIIQLSRITAAEL-RSSGIRSNTLLPAFVDTPMQ-------QTA------MAMFDGALG-  225 (277)
T ss_dssp             -------CT-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCHHH-------HHH------HTCC------
T ss_pred             -------CC-CchhHHHHHHHHHHHHHHHHHHh-cccCeEEEEEeeCCccCchH-------HHh------hhcchhhHH-
Confidence                   01 1223664332        22222 35689999999999998310       000      000000000 


Q ss_pred             cCCcc--ccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee
Q 015961          238 PGTKA--AWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  283 (397)
Q Consensus       238 ~g~~~--~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s  283 (397)
                      .....  .........+..++|.++++++...  ...|+++++.+|...+
T Consensus       226 ~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          226 AGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             -CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            00000  0001112334566688888877543  3458999998876543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.53  E-value=4e-13  Score=122.53  Aligned_cols=220  Identities=16%  Similarity=0.026  Sum_probs=132.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------------------CCCCCCceEEEccC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------------------WNADHLVEYVQCDV   82 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------------------~~~~~~v~~~~~Dl   82 (397)
                      ...+|++|||||+|+||.+++++|++     +|++|++++|+....                    .....++.++.+|+
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   86 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAA-----EGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV   86 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC
Confidence            34568999999999999999999999     899999999842110                    00124677899999


Q ss_pred             CCHHHHHHHHc-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCC
Q 015961           83 SDPEETQAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGT  146 (397)
Q Consensus        83 ~d~~~l~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~  146 (397)
                      +|.+++.++++       .+|.++|.|+......      ++.+..+++|+.|+.++++++...   ...-.+|+++||.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS  166 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch
Confidence            99988877665       5788888877533211      144567899999999999987543   1123567777753


Q ss_pred             ccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhH
Q 015961          147 KHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV  218 (397)
Q Consensus       147 ~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~  218 (397)
                      ..+.      +      .         + ....|+..|.        ++... ...|+++..++|+.|.+  +.......
T Consensus       167 ~~~~------~------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~t--~~~~~~~~  221 (280)
T 3pgx_A          167 AGLK------A------T---------P-GNGHYSASKHGLTALTNTLAIEL-GEYGIRVNSIHPYSVET--PMIEPEAM  221 (280)
T ss_dssp             GGTS------C------C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS--TTCCHHHH
T ss_pred             hhcc------C------C---------C-CchhHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCcccC--cccchhhh
Confidence            3221      0      0         1 1123654322        22222 34689999999999998  32111111


Q ss_pred             HHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961          219 GALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  280 (397)
Q Consensus       219 ~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~  280 (397)
                      ...   ..........+.... ..   .. ...+..++|.++++++....  ..|+++++.+|.
T Consensus       222 ~~~---~~~~~~~~~~~~~~~-~~---~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          222 MEI---FARHPSFVHSFPPMP-VQ---PN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHH---HHHCGGGGGGSCCBT-TB---CS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hhh---hhcCchhhhhhhhcc-cC---CC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            101   000000000000011 11   11 23455666888888775433  458899987753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.52  E-value=5.8e-14  Score=126.73  Aligned_cols=217  Identities=14%  Similarity=0.021  Sum_probs=125.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+.....    .....+.++.+|++|.++++++++       
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAK-----GGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            358999999999999999999999     8999999999753210    012468899999999988877665       


Q ss_pred             cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccC------CCcceEEEecCCccccccccccCCCC
Q 015961           94 QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA------PNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~------~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                      .+|.++|+|+......       ++....+++|+.++.++++++....      ....+++++||...+.      +   
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------~---  153 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR------P---  153 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS------C---
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC------C---
Confidence            5688899877543111       1345678999999998888775431      1134577776432111      0   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  232 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  232 (397)
                                  .+ ....|+..|.        ++..+ ...++++..++|+.+..+-.......  ....   ..+...
T Consensus       154 ------------~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~---~~~~~~  214 (261)
T 3n74_A          154 ------------RP-NLAWYNATKGWVVSVTKALAIEL-APAKIRVVALNPVAGETPLLTTFMGE--DSEE---IRKKFR  214 (261)
T ss_dssp             ------------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEC----------------------------
T ss_pred             ------------CC-CccHHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEecCcccChhhhhhccc--CcHH---HHHHHh
Confidence                        01 1122554222        22222 34689999999999987321111000  0000   000000


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeeh
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  284 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~  284 (397)
                             ...   ......+.+++|.++++++...  ...|+++++.+|..++.
T Consensus       215 -------~~~---~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          215 -------DSI---PMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             ---------C---TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             -------hcC---CcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence                   000   1112334566688888776432  34689999998876654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.52  E-value=1.3e-13  Score=125.77  Aligned_cols=157  Identities=20%  Similarity=0.139  Sum_probs=106.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+....      . .....+.++.+|++|.+++.++++    
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAA-----RGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVE   97 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            457999999999999999999999     899999999975321      0 112468899999999988777665    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccccccccccCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                         .+|.++|.|+......      ++.+..+++|+.|+.++++++...    ..+..+|+++||...+.      +   
T Consensus        98 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~------~---  168 (279)
T 3sju_A           98 RFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ------G---  168 (279)
T ss_dssp             HHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS------C---
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc------C---
Confidence               5677888877533211      134567889999999999987551    11245788777533221      0   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                         .         + ....|+..|.     ...+.  ....|+++..++|+.|..
T Consensus       169 ---~---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T  210 (279)
T 3sju_A          169 ---V---------M-YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVET  210 (279)
T ss_dssp             ---C---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCS
T ss_pred             ---C---------C-CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccc
Confidence               0         1 1122664333     22221  134689999999999987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.52  E-value=1.5e-13  Score=125.65  Aligned_cols=212  Identities=14%  Similarity=0.046  Sum_probs=130.6

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+  |+||.+++++|++     .|++|++++|+....     . .....+.++.+|++|.+++.++++   
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHR-----EGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999  9999999999999     899999999975310     0 001247789999999998877765   


Q ss_pred             ----cCCCeeEEEEeccc--------CC--CcHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEecCCccccccccccCC
Q 015961           94 ----QLTDVTHIFYVTWT--------NR--STEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~--------~~--~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                          .+|.++|+|+....        ..  ++.+..+++|+.|+.++++++..... +-.+|+++||...+.      + 
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~------~-  167 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK------V-  167 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS------B-
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc------C-
Confidence                56889998875321        11  14566789999999999999876521 235788777532221      0 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                           .         + ....|+..|.     ...+.  ....|+++.+++|+.|.++........ ..+..  .+.+  
T Consensus       168 -----~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~--~~~~--  227 (285)
T 2p91_A          168 -----V---------P-HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF-HLLME--HTTK--  227 (285)
T ss_dssp             -----C---------T-TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH-HHHHH--HHHH--
T ss_pred             -----C---------C-CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch-HHHHH--HHHh--
Confidence                 0         1 0112554322     22221  134689999999999998421111111 11100  0111  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      ..|+.            ...+..++|..+++++...  ...|++|++.++.
T Consensus       228 ~~p~~------------~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          228 VNPFG------------KPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             HSTTS------------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cCCCC------------CCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            11211            1224556688888776532  2357889988764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.52  E-value=4.5e-14  Score=127.85  Aligned_cols=213  Identities=14%  Similarity=0.090  Sum_probs=131.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ..+|+||||||+|+||.+++++|++     +|++|++++|+....      ..  ...++.++.+|++|.++++++++  
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAA-----AGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321      00  12468899999999987766655  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           .+|.++|.|+......      +..+..+++|+.++.++++++...-   ..-.+|+++||...+..        
T Consensus        93 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  164 (266)
T 4egf_A           93 AEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP--------  164 (266)
T ss_dssp             HHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--------
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC--------
Confidence                 6788999887543211      1346678999999999988876531   11347777765332210        


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                                   .+ ....|+..|.        ++..+ ...|+++..++|+.|..+-....... ...  ...+..  
T Consensus       165 -------------~~-~~~~Y~asK~a~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~--~~~~~~--  224 (266)
T 4egf_A          165 -------------LP-DHYAYCTSKAGLVMATKVLAREL-GPHGIRANSVCPTVVLTEMGQRVWGD-EAK--SAPMIA--  224 (266)
T ss_dssp             -------------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCBCSHHHHHHTCS-HHH--HHHHHT--
T ss_pred             -------------CC-CChHHHHHHHHHHHHHHHHHHHH-hhhCeEEEEEEeCCCcCchhhhhccC-hHH--HHHHHh--
Confidence                         01 1123654322        22222 34689999999999987310000000 000  000011  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCe
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDV  281 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~  281 (397)
                      ..|+            ....+..++|.++++++..  ....|+++++.+|..
T Consensus       225 ~~p~------------~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          225 RIPL------------GRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             TCTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCC------------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCcc
Confidence            1121            1123355668888887754  234589999987754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.52  E-value=5.7e-14  Score=127.71  Aligned_cols=158  Identities=16%  Similarity=0.114  Sum_probs=106.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHH-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL-----   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~-----   92 (397)
                      .+|+||||||+|+||++++++|++     .|++|++++|+....      . ....++.++.+|++|++++.+++     
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAG-----LGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 01246788999999998887766     


Q ss_pred             ---ccCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           93 ---SQLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        93 ---~~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         ..+|.++|+|+.....  .    ++.+..+++|+.++.++++++...  ..+..+|+++||...|..          
T Consensus        95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------  164 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA----------  164 (273)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC----------
T ss_pred             HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC----------
Confidence               3577788887653221  1    145667789999999999988532  112467887775433211          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                        .         + ....|+..|.     ...+.  ....|+++.+++|+.|+++
T Consensus       165 --~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  207 (273)
T 1ae1_A          165 --L---------P-SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTP  207 (273)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--
T ss_pred             --C---------C-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCc
Confidence              0         1 1123554322     22211  1345899999999999984

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.52  E-value=1.1e-13  Score=127.45  Aligned_cols=231  Identities=10%  Similarity=0.013  Sum_probs=139.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCC---CceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADH---LVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~---~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      .. ...   ++.++.+|++|++++.++++ 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAK-----EGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            357899999999999999999999     899999999975321      00 011   57889999999988877665 


Q ss_pred             ------cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961           94 ------QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                            .+|.++|+|+......        ++.+..+++|+.|+.++++++...  ..+ .+|+++||...+..      
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~------  172 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ------  172 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS------
T ss_pred             HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccC------
Confidence                  5788999887532211        145668899999999999888654  112 57887775332210      


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhHHHHH-----HHHH--hcCCCeeEEEEcCCceeeccCCCcc-hhHHHHHHHHHHhh
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTLEDIL-----FEEV--EKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCK  229 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~e~~l-----~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~  229 (397)
                            .        .+ ....|+..|..     ..+.  ....|+++.+++|+.|.++-..... ....... ......
T Consensus       173 ------~--------~~-~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~  236 (297)
T 1xhl_A          173 ------A--------HS-GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDK-LYSFIG  236 (297)
T ss_dssp             ------C--------CT-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHH-HHHHHH
T ss_pred             ------C--------CC-CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccc-hHHHHH
Confidence                  0        01 12236543322     2111  1356899999999999883110000 0000000 000011


Q ss_pred             hcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC---CCCCCceeccCCCeeehHHHHHHHHH
Q 015961          230 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP---YAKNEAFNCNNGDVFKWKHLWKVLAE  293 (397)
Q Consensus       230 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~---~~~g~~yni~~~~~~s~~el~~~i~~  293 (397)
                      .....+  |        .....+..++|..+++++..+   ...|+++++.+|....+.+....+.+
T Consensus       237 ~~~~~~--p--------~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          237 SRKECI--P--------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             HCTTTC--T--------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             HHHhcC--C--------CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence            111110  1        012334556688877776533   35688999988877666665444444

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.52  E-value=1.7e-14  Score=130.93  Aligned_cols=221  Identities=11%  Similarity=0.055  Sum_probs=132.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      ..+|+||||||+|+||.+++++|++     +|++|++++|++...   .....++.++.+|++|.+++.++++       
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVN-----SGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3468999999999999999999999     899999999975321   0011357889999999998877665       


Q ss_pred             cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.++|+|+......       ++.+..+++|+.++.++++++... ..+..+++++||...+      ++.       
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~------~~~-------  148 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA------IGQ-------  148 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH------HCC-------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCcccc------CCC-------
Confidence            5788899876432111       134667899999999999988643 0113577777753222      110       


Q ss_pred             CCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcch-hHHHHHHHHHHhhhcCCCcee
Q 015961          166 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMN-LVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~  237 (397)
                              + ....|+..|.     ...+.  ....|+++.+++|+.|+++-...... .......+....  ...|+  
T Consensus       149 --------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~p~--  215 (270)
T 1yde_A          149 --------A-QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGM--LAQPL--  215 (270)
T ss_dssp             --------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHH--HTSTT--
T ss_pred             --------C-CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHh--hcCCC--
Confidence                    0 1122554322     22221  13468999999999999841000000 000000000000  11121  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcC-CCCCCCceeccCCCeeehH
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWK  285 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~-~~~~g~~yni~~~~~~s~~  285 (397)
                       +         ......++|..+++++.. ....|+++++.+|......
T Consensus       216 -~---------r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~  254 (270)
T 1yde_A          216 -G---------RMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYG  254 (270)
T ss_dssp             -S---------SCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC-
T ss_pred             -C---------CCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccC
Confidence             0         122345557766666543 2345889999888666554

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.52  E-value=2.7e-14  Score=127.85  Aligned_cols=159  Identities=9%  Similarity=0.014  Sum_probs=107.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHc---cCCCee
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS---QLTDVT   99 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~---~~~~V~   99 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|++...  .....++.++.+|++|+++++++++   .+|.++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAR-----EGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            458999999999999999999999     899999999975321  1111367899999999998876654   567788


Q ss_pred             EEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus       100 h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      |+|+.....      .++.+..+++|+.++.++++++...  ..+..+++++||...+..            .       
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~-------  140 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK------------G-------  140 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB------------C-------
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcC------------C-------
Confidence            887643221      1134567899999999999887542  112567887775332210            0       


Q ss_pred             CCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          172 RLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       172 ~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                        +.....|+..|.     ...+.  ....|+++.++||+.|+++
T Consensus       141 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  183 (246)
T 2ag5_A          141 --VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP  183 (246)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCc
Confidence              101223654322     22221  1345899999999999983

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.52  E-value=3.5e-14  Score=128.91  Aligned_cols=121  Identities=17%  Similarity=0.033  Sum_probs=90.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|+||||||+|+||++++++|++.    .|++|++++|+....      . ....++.++.+|++|.+++..+++    
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRL----FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHH----SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHh----cCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            3579999999999999999999862    388999999974321      0 012468899999999998877776    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccc
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY  149 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y  149 (397)
                         .+|.|+|+|+......      .+....+++|+.|+.++++++.....+..+|+++||...|
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~  143 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV  143 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred             hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhh
Confidence               6777889877533211      2346678999999999999998752223478888876554

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.52  E-value=6.5e-14  Score=127.15  Aligned_cols=156  Identities=14%  Similarity=0.114  Sum_probs=107.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|++|||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.+++.++++    
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAV-----AGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0 012468889999999998877776    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         .+|.++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+.      +.    
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~------~~----  169 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL------AR----  169 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------BC----
T ss_pred             HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC------CC----
Confidence               5788888877532211      145667899999999998877653  11235777777532221      10    


Q ss_pred             CCCCCCCCCCCCCCCcchhHHH-----H---HHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTLED-----I---LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~-----~---l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 + ....|+..|     +   ++..+ ...|+++..++|+.|..
T Consensus       170 -----------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  210 (271)
T 4ibo_A          170 -----------A-TVAPYTVAKGGIKMLTRAMAAEW-AQYGIQANAIGPGYMLT  210 (271)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             -----------C-CchhHHHHHHHHHHHHHHHHHHH-hhhCeEEEEEEeccEeC
Confidence                       0 112265432     2   22222 34689999999999988

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.51  E-value=4.4e-14  Score=125.98  Aligned_cols=155  Identities=10%  Similarity=-0.060  Sum_probs=105.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc---------c
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---------Q   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~---------~   94 (397)
                      .++|+||||||+|+||++++++|++     +|++|++++|++....   ....++.+|++|++++.++++         .
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRA-----RNWWVASIDVVENEEA---SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSCCTTS---SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHh-----CCCEEEEEeCChhhcc---CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            3467999999999999999999999     8999999999865422   245678899999988777665         4


Q ss_pred             CCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        95 ~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      +|.++|+|+.....   .+    +.+..+++|+.++.++++++...-.+-.+++++||...+..            .   
T Consensus        77 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~---  141 (241)
T 1dhr_A           77 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG------------T---  141 (241)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------C---
T ss_pred             CCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC------------C---
Confidence            66788887643210   11    34567889999999999988764111247777775332210            0   


Q ss_pred             CCCCCCCCCCcchhHHHH-----HHHHHh--c--CCCeeEEEEcCCceee
Q 015961          168 EDMPRLDAPNFYYTLEDI-----LFEEVE--K--KEELSWSVHRPDTIFG  208 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~~-----l~~~~~--~--~~g~~~~ilRp~~v~G  208 (397)
                            + ....|+..|.     ...+..  .  ..|+++.+++|+.|-.
T Consensus       142 ------~-~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T  184 (241)
T 1dhr_A          142 ------P-GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT  184 (241)
T ss_dssp             ------T-TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred             ------C-CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccC
Confidence                  1 1223664333     333221  2  4569999999998765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.51  E-value=3e-14  Score=129.01  Aligned_cols=209  Identities=16%  Similarity=0.120  Sum_probs=126.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+.....    ....++.++.+|++|.++++++++       
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHA-----QGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREME  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            358999999999999999999999     8999999999753210    012468899999999988877665       


Q ss_pred             cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.++|+|+.....  .    ++.+..+++|+.|+.++.+++...  ..+..+|+++||...+.      +.       
T Consensus       101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~------~~-------  167 (266)
T 3grp_A          101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV------GN-------  167 (266)
T ss_dssp             SCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC------CC-------
Confidence            678889987753221  1    145667899999977766665432  11245778777532221      10       


Q ss_pred             CCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          166 FTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                              + ....|+..|.        ++..+ ...|+++..++|+.|..+-.....   ....  ..+.  ...|+  
T Consensus       168 --------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gI~vn~v~PG~v~t~~~~~~~---~~~~--~~~~--~~~p~--  228 (266)
T 3grp_A          168 --------P-GQTNYCAAKAGLIGFSKALAQEI-ASRNITVNCIAPGFIKSAMTDKLN---EKQK--EAIM--AMIPM--  228 (266)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSHHHHTCC---HHHH--HHHH--TTCTT--
T ss_pred             --------C-CchhHHHHHHHHHHHHHHHHHHh-hhhCcEEEEEeeCcCCCchhhccC---HHHH--HHHH--hcCCC--
Confidence                    1 1122654332        22222 346899999999999873111111   0010  0011  12221  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                                .......++|.++++++...  ...|+++++.+|.
T Consensus       229 ----------~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          229 ----------KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             ----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ----------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence                      11223455688877776543  3458999998764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.51  E-value=8.2e-14  Score=125.92  Aligned_cols=209  Identities=17%  Similarity=0.135  Sum_probs=130.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHcc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ------   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~~------   94 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....    .....++.++.+|++|.+++.++++.      
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAR-----EGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999     899999999975321    00014678899999999888776654      


Q ss_pred             -CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           95 -LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        95 -~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                       +|.++|+|+.....  .    ++.+..+++|+.|+.++++++.....+..+++++||...| +.               
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~---------------  143 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA---------------  143 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH---------------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC---------------
Confidence             57788876542211  0    1345678999999999999887642224578877754333 10               


Q ss_pred             CCCCCCCCCCcchhH-----H---HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 015961          168 EDMPRLDAPNFYYTL-----E---DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG  239 (397)
Q Consensus       168 E~~p~~~~~~~~y~~-----e---~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g  239 (397)
                            + ....|+.     +   +.++... ...|+++.+++|+.|.++-.....   ....  ..+..  ..|+   +
T Consensus       144 ------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~---~~~~--~~~~~--~~p~---~  205 (263)
T 2a4k_A          144 ------F-GLAHYAAGKLGVVGLARTLALEL-ARKGVRVNVLLPGLIQTPMTAGLP---PWAW--EQEVG--ASPL---G  205 (263)
T ss_dssp             ------H-HHHHHHHCSSHHHHHHHHHHHHH-TTTTCEEEEEEECSBCCGGGTTSC---HHHH--HHHHH--TSTT---C
T ss_pred             ------C-CcHHHHHHHHHHHHHHHHHHHHh-hhhCcEEEEEEeCcCcCchhhhcC---HHHH--HHHHh--cCCC---C
Confidence                  0 0111332     2   2222222 456899999999999984221111   1110  00111  1221   1


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          240 TKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       240 ~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                               ...+..++|..+++++..+  ...|+.+++.+|..
T Consensus       206 ---------~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          206 ---------RAGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             ---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             ---------CCcCHHHHHHHHHHHhCccccCCcCCEEEECCCcc
Confidence                     1234455678877776543  24588888887653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.51  E-value=5.9e-14  Score=125.83  Aligned_cols=211  Identities=13%  Similarity=0.041  Sum_probs=122.9

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCC-CHHHHHHHHccCCCeeE
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVS-DPEETQAKLSQLTDVTH  100 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~-d~~~l~~~~~~~~~V~h  100 (397)
                      .+..+|+||||||+|+||++++++|++     +|++|++++|++.... ....+.++ +|+. +.+.+.+.+.++|.++|
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~-~~~~~~~~-~D~~~~~~~~~~~~~~iD~lv~   87 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQ-----EGAEVTICARNEELLK-RSGHRYVV-CDLRKDLDLLFEKVKEVDILVL   87 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHH-HTCSEEEE-CCTTTCHHHHHHHSCCCSEEEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCHHHHH-hhCCeEEE-eeHHHHHHHHHHHhcCCCEEEE
Confidence            344678999999999999999999998     8999999999752110 01245667 9993 23444444457788999


Q ss_pred             EEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC
Q 015961          101 IFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  172 (397)
Q Consensus       101 ~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~  172 (397)
                      +|+......      ++....+++|+.++.++.+++...  ..+..+++++||...|..            .        
T Consensus        88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~--------  147 (249)
T 1o5i_A           88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP------------I--------  147 (249)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------C--------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC------------C--------
Confidence            877432211      134667899999977665544322  112578888875433311            0        


Q ss_pred             CCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcccc
Q 015961          173 LDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAW  244 (397)
Q Consensus       173 ~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  244 (397)
                       + ....|+..|.        ++... ...|+++.+++|+.|.++  ... ........ ..+..  ..|+         
T Consensus       148 -~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~--~~~-~~~~~~~~-~~~~~--~~p~---------  209 (249)
T 1o5i_A          148 -E-NLYTSNSARMALTGFLKTLSFEV-APYGITVNCVAPGWTETE--RVK-ELLSEEKK-KQVES--QIPM---------  209 (249)
T ss_dssp             -T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCT--THH-HHSCHHHH-HHHHT--TSTT---------
T ss_pred             -C-CCchHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCCCccC--ccc-ccchhhHH-HHHHh--cCCC---------
Confidence             1 1122553222        22222 346899999999999983  210 00000100 00011  1121         


Q ss_pred             ceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          245 ECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       245 ~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                         ....+..++|.++++++...  ...|++|++.+|.
T Consensus       210 ---~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          210 ---RRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ---CCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence               11234556688877776543  2458899998764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.51  E-value=7.6e-14  Score=126.72  Aligned_cols=210  Identities=14%  Similarity=0.016  Sum_probs=129.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|.+++.++++   
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  102 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLAS-----MGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV  102 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999964221       0 012468899999999988777665   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|+|+......      ++....+++|+.++.++++++...  ..+..+++++||...+.      +.   
T Consensus       103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~~---  173 (271)
T 4iin_A          103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER------GN---  173 (271)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------CC---
T ss_pred             HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC------CC---
Confidence                5788888877533211      145677899999999988877543  11246778777533221      10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (397)
                                  + ....|+..|.     ...+.  ....++++..++|+.|..+-....   ....      ...... 
T Consensus       174 ------------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~------~~~~~~-  230 (271)
T 4iin_A          174 ------------M-GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL---KDEL------KADYVK-  230 (271)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------------CGG-
T ss_pred             ------------C-CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh---cHHH------HHHHHh-
Confidence                        0 1122654332     22221  134689999999999877311100   0000      000000 


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                            .   .......+..++|.++++++...  ...|+++++.+|.
T Consensus       231 ------~---~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          231 ------N---IPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             ------G---CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             ------c---CCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence                  0   01112335566688888777543  3468999988764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.51  E-value=7.9e-14  Score=126.13  Aligned_cols=156  Identities=13%  Similarity=0.091  Sum_probs=106.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|++|||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.+++.++++    
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAE-----QGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0 012468899999999998877665    


Q ss_pred             ---cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         .+|.++|+|+......       ++.+..+++|+.++.++++++.... .+-.+++++||...+..           
T Consensus        85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  153 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS-----------  153 (264)
T ss_dssp             HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC-----------
T ss_pred             HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC-----------
Confidence               5677888875421111       1456678999999999999876531 00147777775332211           


Q ss_pred             CCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                       .         + ....|+..|        .++..+ ...|+++..++|+.|++
T Consensus       154 -~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~t  195 (264)
T 3ucx_A          154 -Q---------A-KYGAYKMAKSALLAMSQTLATEL-GEKGIRVNSVLPGYIWG  195 (264)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEEEEESSCBS
T ss_pred             -C---------C-ccHHHHHHHHHHHHHHHHHHHHh-CccCeEEEEEecCcccc
Confidence             0         1 112265432        222222 35789999999999988

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.51  E-value=4.1e-14  Score=126.75  Aligned_cols=209  Identities=18%  Similarity=0.157  Sum_probs=130.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|++|||||+|+||++++++|++     +|++|++++|+.....    .....+..+.+|++|+++++++++       
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAE-----RGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            458999999999999999999999     8999999999753210    001246789999999998877765       


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+++++||...+.      +.       
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------~~-------  149 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM------GN-------  149 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------CC-------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC------CC-------
Confidence            6788899877533211      145667899999999999987542  11245778777543221      10       


Q ss_pred             CCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          166 FTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                              + ....|+..|.        ++..+ ...|+++..++|+.|..+-......  .....   ..  ...|.  
T Consensus       150 --------~-~~~~Y~asK~a~~~l~~~la~e~-~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~---~~--~~~p~--  210 (248)
T 3op4_A          150 --------A-GQANYAAAKAGVIGFTKSMAREV-ASRGVTVNTVAPGFIETDMTKALND--EQRTA---TL--AQVPA--  210 (248)
T ss_dssp             --------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBSSTTTTTSCH--HHHHH---HH--HTCTT--
T ss_pred             --------C-CChHHHHHHHHHHHHHHHHHHHH-HHhCeEEEEEeeCCCCCchhhhcCH--HHHHH---HH--hcCCC--
Confidence                    1 1122654332        22222 3568999999999998732111111  00100   01  12221  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                                ....+..++|.++++++...  ...|+++++.+|.
T Consensus       211 ----------~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          211 ----------GRLGDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             ----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             ----------CCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence                      11234455677777776543  2358999998764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.50  E-value=9.1e-14  Score=126.77  Aligned_cols=159  Identities=15%  Similarity=0.129  Sum_probs=106.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|+||||||+|+||++++++|++     .|++|++++|++...         ......+.++.+|++|++++.++++  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQ-----QGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            457999999999999999999998     899999999974321         0011357789999999998877665  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecCCccccccccccCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                           ++|.|+|+|+......      ++....+++|+.+    ++++++.+++.+..-.+|+++||...+..       
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~-------  178 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-------  178 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC-------
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc-------
Confidence                 6788999877432211      1456678999999    67777777664311267887775432210       


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHHHH-----HHHHh--c--CCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLEDIL-----FEEVE--K--KEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~~l-----~~~~~--~--~~g~~~~ilRp~~v~G  208 (397)
                           .      +. + ....|+..|..     ..+..  .  ..++++.+++|+.|.+
T Consensus       179 -----~------~~-~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t  224 (279)
T 1xg5_A          179 -----L------PL-S-VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVET  224 (279)
T ss_dssp             -----C------SC-G-GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCS
T ss_pred             -----C------CC-C-CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccc
Confidence                 0      00 1 11235543322     22111  2  5689999999999987

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.50  E-value=6e-14  Score=127.02  Aligned_cols=158  Identities=15%  Similarity=0.053  Sum_probs=107.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLS-------QL   95 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~   95 (397)
                      .|+|+||||||+|+||.+++++|++     +|++|++++|+.... .....++.++.+|++|.+++.++++       .+
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSE-----EGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHH-----TTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4678999999999999999999999     899999999975321 1122478899999999988877765       56


Q ss_pred             CCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        96 ~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      |.++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+..            .   
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~------------~---  153 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT------------F---  153 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC------------C---
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC------------C---
Confidence            77888877532211      134567899999999987776532  112467887775332210            0   


Q ss_pred             CCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeec
Q 015961          168 EDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                            + ....|+..|        .++..+ ...|+++..++|+.|..+
T Consensus       154 ------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~  195 (266)
T 3p19_A          154 ------P-DHAAYCGTKFAVHAISENVREEV-AASNVRVMTIAPSAVKTE  195 (266)
T ss_dssp             ------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBSSS
T ss_pred             ------C-CCchHHHHHHHHHHHHHHHHHHh-cccCcEEEEEeeCccccc
Confidence                  1 112255422        222222 356899999999999883

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.50  E-value=3.1e-13  Score=124.33  Aligned_cols=212  Identities=13%  Similarity=0.061  Sum_probs=132.7

Q ss_pred             CCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|+||||||+|  +||.+++++|++     .|++|++++|+....     . .....+.++.+|++|.++++++++    
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCA-----QGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            57999999998  999999999999     899999999975321     0 011346789999999988877665    


Q ss_pred             ---cCCCeeEEEEeccc--------CC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC
Q 015961           94 ---QLTDVTHIFYVTWT--------NR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~--------~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                         .+|.++|+|+....        ..  ++....+++|+.++.++++++...-.+-.+|+++||...+.      +   
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~------~---  175 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK------V---  175 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------C---
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc------C---
Confidence               46778888775321        11  14567789999999999999887533345777776432221      0   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  232 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  232 (397)
                         .         + ....|+..|        .++..+ ...|+++..++|+.|..+-....... .....  ....  .
T Consensus       176 ---~---------~-~~~~Y~asKaal~~l~~~la~e~-~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~--~~~~--~  236 (296)
T 3k31_A          176 ---V---------P-HYNVMGVCKAALEASVKYLAVDL-GKQQIRVNAISAGPVRTLASSGISDF-HYILT--WNKY--N  236 (296)
T ss_dssp             ---C---------T-TTTHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECCCCCSSCCSCHHH-HHHHH--HHHH--H
T ss_pred             ---C---------C-CchhhHHHHHHHHHHHHHHHHHH-hhcCcEEEEEEECCCcCchhhcccch-HHHHH--HHHh--c
Confidence               0         1 112255322        222222 45689999999999998422111111 11100  0111  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCee
Q 015961          233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVF  282 (397)
Q Consensus       233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~  282 (397)
                      .|+.            ...+..++|.++++++..  ....|+++++.+|...
T Consensus       237 ~p~~------------r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          237 SPLR------------RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             STTS------------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCC------------CCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence            1211            122345568888877754  2345899999887544

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.50  E-value=1.3e-12  Score=119.61  Aligned_cols=157  Identities=14%  Similarity=0.048  Sum_probs=107.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------------------CCCCCCceEEEcc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------------------WNADHLVEYVQCD   81 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------------------~~~~~~v~~~~~D   81 (397)
                      .+|++|||||+|.||.+++++|++     .|++|++++|+....                       .....++.++.+|
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQ-----EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD   84 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence            458999999999999999999999     899999999863210                       0012467899999


Q ss_pred             CCCHHHHHHHHc-------cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEec
Q 015961           82 VSDPEETQAKLS-------QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQT  144 (397)
Q Consensus        82 l~d~~~l~~~~~-------~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s  144 (397)
                      ++|.++++++++       .+|.++|.|+......       ++.+..+++|+.|+.++++++...-   .+-.+|+++|
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence            999988877665       5788889887533221       1456678999999999999876531   1235677777


Q ss_pred             CCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeec
Q 015961          145 GTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       145 ~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                      |...+..                     .+ ....|+..|        .++..+ ...|+++..++|+.|..+
T Consensus       165 S~~~~~~---------------------~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gI~vn~v~PG~v~T~  214 (286)
T 3uve_A          165 SVGGLKA---------------------YP-HTGHYVAAKHGVVGLMRAFGVEL-GQHMIRVNSVHPTHVKTP  214 (286)
T ss_dssp             CGGGTSC---------------------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBSST
T ss_pred             chhhccC---------------------CC-CccHHHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCcccCC
Confidence            5332210                     01 112255432        222222 346899999999999873

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.50  E-value=3.3e-13  Score=123.26  Aligned_cols=221  Identities=15%  Similarity=0.055  Sum_probs=131.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|+||||||+|+||.+++++|++     .|++|++++|+....       .....++.++.+|++|++++.++++    
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAA-----DGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999     899999999975321       0112467899999999988777665    


Q ss_pred             ---cCCCeeEEEEeccc--CC-C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWT--NR-S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~--~~-~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|.|+....  .. +    +.+..+++|+.|+.++++++...  ..+..+++++||...+..    ++    
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~----~~----  173 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT----FT----  173 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB----CC----
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC----CC----
Confidence               57888888775322  11 1    34667899999999999988432  112467777775322110    00    


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  234 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (397)
                                 .+ ....|+..|.     ...+.  ....|+++..++|+.|..+-......... .      .  ...+
T Consensus       174 -----------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~------~--~~~~  232 (283)
T 3v8b_A          174 -----------TP-GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE-E------E--TAIP  232 (283)
T ss_dssp             -----------ST-TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-H------H--HSCC
T ss_pred             -----------CC-CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc-h------h--hhhh
Confidence                       01 1223654332     22221  13468999999999998732111100000 0      0  0111


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      .......... ......+..++|.++++++...  ...|+++++.+|.
T Consensus       233 ~~~~~~~~p~-~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          233 VEWPKGQVPI-TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             CBCTTCSCGG-GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             hhhhhhcCcc-ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence            1111110000 0012334566788888877543  3458888887763

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.49  E-value=2.4e-14  Score=129.67  Aligned_cols=161  Identities=10%  Similarity=0.028  Sum_probs=108.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC---cEEEEEeCCCCCCCC------CCCCceEEEccCCCHHHHHHHHc-
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g---~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      .++|+||||||+|+||++++++|++     .|   ++|++++|+......      ...++.++.+|++|.+++.++++ 
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~-----~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   93 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLN-----LPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVAD   93 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHT-----SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHh-----cCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHH
Confidence            3457999999999999999999998     78   999999997643200      02468899999999988877765 


Q ss_pred             --------cCCCeeEEEEecc-cC------CCcHHHHHHhHHHHHHHHHHHHcccCC--------C-----cceEEEecC
Q 015961           94 --------QLTDVTHIFYVTW-TN------RSTEAENCKINGSMFRNVLRAVIPNAP--------N-----LRHVCLQTG  145 (397)
Q Consensus        94 --------~~~~V~h~a~~~~-~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~--------~-----~~~~~~~s~  145 (397)
                              .+|.|+|+|+... ..      .++....+++|+.++.++++++.....        +     ..+|+++||
T Consensus        94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS  173 (267)
T 1sny_A           94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  173 (267)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence                    6888999987533 10      114566789999999999998865310        1     357887775


Q ss_pred             CccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceee
Q 015961          146 TKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       146 ~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                      ...+...            +     + .+ +...|+..|     +...+.  ....+++++++||+.|..
T Consensus       174 ~~~~~~~------------~-----~-~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  224 (267)
T 1sny_A          174 ILGSIQG------------N-----T-DG-GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT  224 (267)
T ss_dssp             GGGCSTT------------C-----C-SC-CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCS
T ss_pred             ccccccC------------C-----C-CC-CchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceec
Confidence            4333110            0     0 00 122366432     222221  134689999999998876

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.49  E-value=5.3e-14  Score=125.07  Aligned_cols=153  Identities=10%  Similarity=-0.011  Sum_probs=104.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc---------cCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---------QLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~---------~~~   96 (397)
                      +|+||||||+|+||++++++|++     +|++|++++|++....   ....++.+|++|.+++.++++         .+|
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id   74 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKK-----NGYTVLNIDLSANDQA---DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   74 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHH-----TTEEEEEEESSCCTTS---SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEecCccccc---cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            47899999999999999999999     8999999999865421   245678899999988776665         566


Q ss_pred             CeeEEEEeccc-C--CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWT-N--RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        97 ~V~h~a~~~~~-~--~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      .|+|+|+.... .  .+    +.+..+++|+.++.++++++...-.+-.+++++||...+.      +            
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~------------  136 (236)
T 1ooe_A           75 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------P------------  136 (236)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------C------------
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc------C------------
Confidence            78888764321 0  11    3466789999999999998876421124677776533221      0            


Q ss_pred             CCCCCCCCcchhHHH-----HHHHHHh--c--CCCeeEEEEcCCceee
Q 015961          170 MPRLDAPNFYYTLED-----ILFEEVE--K--KEELSWSVHRPDTIFG  208 (397)
Q Consensus       170 ~p~~~~~~~~y~~e~-----~l~~~~~--~--~~g~~~~ilRp~~v~G  208 (397)
                         .+ ....|+..|     +...+..  .  ..|+++.+++|+.|.+
T Consensus       137 ---~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t  180 (236)
T 1ooe_A          137 ---TP-SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT  180 (236)
T ss_dssp             ---CT-TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC
T ss_pred             ---CC-CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccC
Confidence               01 122365433     3333321  2  4469999999999887

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.49  E-value=1.7e-13  Score=125.80  Aligned_cols=213  Identities=12%  Similarity=0.035  Sum_probs=131.2

Q ss_pred             CCCEEEEEcCCCh--hHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGI--VGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGf--iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+  ||.+++++|++     .|++|++++|+....     . ....++.++.+|++|.+++.++++   
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAARE-----AGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHH-----TTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            3579999999999  99999999999     899999999874210     0 011357899999999998877665   


Q ss_pred             ----cCCCeeEEEEeccc--------C--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCC
Q 015961           94 ----QLTDVTHIFYVTWT--------N--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~--------~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                          .+|.++|+|+....        .  .++....+++|+.++.++++++...-.+-.+|+++||...+..        
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~--------  176 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV--------  176 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB--------
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC--------
Confidence                56778888775421        0  1145667899999999999988765333457777765332211        


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                                   .+ ....|+..|        .++..+ ...|+++..++|+.|..+-........... .  ...+  
T Consensus       177 -------------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~--~~~~--  236 (293)
T 3grk_A          177 -------------MP-NYNVMGVAKAALEASVKYLAVDL-GPQNIRVNAISAGPIKTLAASGIGDFRYIL-K--WNEY--  236 (293)
T ss_dssp             -------------CT-TTTHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCCCC------CCHHHHH-H--HHHH--
T ss_pred             -------------CC-chHHHHHHHHHHHHHHHHHHHHH-hHhCCEEEEEecCCCcchhhhcccchHHHH-H--HHHh--
Confidence                         01 112255422        222222 456899999999999883211111111101 0  0111  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  282 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~  282 (397)
                      ..|+.            ...+..++|.++++++...  ...|+++++.+|..+
T Consensus       237 ~~p~~------------r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          237 NAPLR------------RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HSTTS------------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCC------------CCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence            11211            1223455677777777542  345899999887543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.49  E-value=3.1e-13  Score=123.32  Aligned_cols=212  Identities=16%  Similarity=0.133  Sum_probs=131.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHcc------C
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLSQ------L   95 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~~------~   95 (397)
                      +|+||||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|.+++.++++.      +
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i  104 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHA-----DGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRL  104 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999     8999999999753210    0024688999999999988877753      4


Q ss_pred             CCeeEEEEecccC---------CC---cHHHHHHhHHHHHHHHHHHHcccC--------CCcceEEEecCCccccccccc
Q 015961           96 TDVTHIFYVTWTN---------RS---TEAENCKINGSMFRNVLRAVIPNA--------PNLRHVCLQTGTKHYLGPFEA  155 (397)
Q Consensus        96 ~~V~h~a~~~~~~---------~~---~~~~~~~~nv~gt~~ll~a~~~~~--------~~~~~~~~~s~~~~y~ss~~~  155 (397)
                      |.++|+++.....         ..   .....+++|+.++.++++++....        .+-.+|+++||...+..    
T Consensus       105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  180 (281)
T 3ppi_A          105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG----  180 (281)
T ss_dssp             EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC----
T ss_pred             CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC----
Confidence            5566763321111         01   246788999999999998876431        12457787775332211    


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHH
Q 015961          156 FGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAV  227 (397)
Q Consensus       156 ~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i  227 (397)
                              .         + ....|+..|.        ++... ...|+++..++|+.|..+-......  ....   ..
T Consensus       181 --------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~---~~  236 (281)
T 3ppi_A          181 --------Q---------I-GQTAYAAAKAGVIGLTIAAARDL-SSAGIRVNTIAPGTMKTPIMESVGE--EALA---KF  236 (281)
T ss_dssp             --------C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCHHHHTTCH--HHHH---HH
T ss_pred             --------C---------C-CCcccHHHHHHHHHHHHHHHHHH-hhcCeEEEEEecCcCCchhhhcccH--HHHH---HH
Confidence                    0         1 1223664333        22222 4468999999999987631111110  0000   01


Q ss_pred             hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeee
Q 015961          228 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFK  283 (397)
Q Consensus       228 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s  283 (397)
                      .+  ..+  .++         ...+..++|.++++++......|+++++.+|..++
T Consensus       237 ~~--~~~--~~~---------~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          237 AA--NIP--FPK---------RLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HH--TCC--SSS---------SCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             Hh--cCC--CCC---------CCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            11  112  111         12345566888888887666779999998876543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.49  E-value=1.6e-12  Score=120.63  Aligned_cols=156  Identities=17%  Similarity=0.101  Sum_probs=106.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceEEEccCCCH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSDP   85 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d~   85 (397)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+.....                   ....++.++.+|++|.
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~-----~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQ-----DGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            468999999999999999999999     8999999987632110                   0124678899999999


Q ss_pred             HHHHHHHc-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccc
Q 015961           86 EETQAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHY  149 (397)
Q Consensus        86 ~~l~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y  149 (397)
                      +++.++++       .+|.++|.|+......      ++.+..+++|+.|+.++++++...   ...-.+|+++||...+
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            88877665       5788889877533211      145667899999999999888543   1123567777653322


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          150 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       150 ~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      .      +      .         + ....|+..|.        ++..+ ...|+++..++|+.|.+
T Consensus       200 ~------~------~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  243 (317)
T 3oec_A          200 R------G------A---------P-GQSHYAASKHGVQGLMLSLANEV-GRHNIRVNSVNPGAVNT  243 (317)
T ss_dssp             S------C------C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBSS
T ss_pred             C------C------C---------C-CCcchHHHHHHHHHHHHHHHHHH-hhcCeEEEEEecCcccC
Confidence            1      1      0         1 1123654322        22222 34689999999999988

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.49  E-value=7.7e-14  Score=125.61  Aligned_cols=157  Identities=14%  Similarity=0.039  Sum_probs=106.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      |+|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|.+++.++++    
T Consensus         1 m~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   75 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVK-----DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARK   75 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999     899999999975321      0 012357889999999998887776    


Q ss_pred             ---cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC--CC-cceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PN-LRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~-~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|+|+.....      .++.+..+++|+.++.++++++...-  .+ ..+++++||...+      ++.   
T Consensus        76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~~---  146 (256)
T 1geg_A           76 TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH------VGN---  146 (256)
T ss_dssp             HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SCC---
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc------CCC---
Confidence               678888987643211      11345678999999988888776531  11 4577777653221      110   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                                  + ....|+..|.     ...+.  ....|+++.+++|+.|.+
T Consensus       147 ------------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  187 (256)
T 1geg_A          147 ------------P-ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKT  187 (256)
T ss_dssp             ------------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred             ------------C-CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCcc
Confidence                        1 1123554332     22211  134689999999999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.48  E-value=6.6e-13  Score=120.80  Aligned_cols=211  Identities=12%  Similarity=-0.009  Sum_probs=128.7

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+  |+||++++++|++     +|++|++++|+....     .. ....+.++.+|++|.+++.++++   
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFN-----QGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHT-----TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHH
Confidence            45899999999  9999999999999     899999999976410     00 01247889999999988877665   


Q ss_pred             ----cCCCeeEEEEeccc--------CC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCC
Q 015961           94 ----QLTDVTHIFYVTWT--------NR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~--------~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                          .+|.++|+|+....        ..  ++.+..+++|+.|+.++++++...-.+-.+|+++||...+.      +  
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~--  151 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------Y--  151 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------B--
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC------C--
Confidence                45678888764321        11  14566789999999999999876521124677776432111      1  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHH--------HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l--------~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                          .         + ....|+..|..        +... ...|+++..++|+.|.++-....... ....  ..+..  
T Consensus       152 ----~---------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~--~~~~~--  211 (275)
T 2pd4_A          152 ----M---------A-HYNVMGLAKAALESAVRYLAVDL-GKHHIRVNALSAGPIRTLASSGIADF-RMIL--KWNEI--  211 (275)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEEEEECCCCCTTGGGSTTH-HHHH--HHHHH--
T ss_pred             ----C---------C-CchhhHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCccccchhhhcccc-HHHH--HHHHh--
Confidence                0         1 11225543222        2222 35689999999999988321111110 1110  00111  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      ..|+.            ...+..++|..+++++...  ...|+.+++.++.
T Consensus       212 ~~p~~------------~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          212 NAPLR------------KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             HSTTS------------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCcC------------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            11211            1123455677877776532  3457888887764

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.48  E-value=1.5e-13  Score=123.15  Aligned_cols=157  Identities=17%  Similarity=0.100  Sum_probs=104.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC-CCC---C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN---W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~---~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|++ ...   . ....++.++.+|++|++++.++++      
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAV-----EGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999     899999999976 211   0 012467889999999988776653      


Q ss_pred             -cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       ++|.++|+|+.....      .++.+..+++|+.++.++++++...  ..+..+++++||...+..            .
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~  148 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK------------I  148 (249)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC------------C
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC------------C
Confidence             678899987753221      1145667899999988887775332  112567887775433311            0


Q ss_pred             CCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                               + ....|+..|     +...+.  ....|+++.+++|+.|.+
T Consensus       149 ---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  189 (249)
T 2ew8_A          149 ---------E-AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRT  189 (249)
T ss_dssp             ---------S-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--
T ss_pred             ---------C-CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcC
Confidence                     1 112255432     222221  134689999999999988

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.48  E-value=1.6e-12  Score=118.44  Aligned_cols=219  Identities=15%  Similarity=0.051  Sum_probs=131.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC---------C-----------CCCCCCceEEEccCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---------N-----------WNADHLVEYVQCDVSD   84 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~---------~-----------~~~~~~v~~~~~Dl~d   84 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|....         .           ......+.++.+|++|
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAA-----EGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHH-----cCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            458999999999999999999999     89999999984210         0           0012467889999999


Q ss_pred             HHHHHHHHc-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCcc
Q 015961           85 PEETQAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKH  148 (397)
Q Consensus        85 ~~~l~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~  148 (397)
                      .+++.++++       .+|.++|.|+......      ++.+..+++|+.|+.++++++...   ..+-.+|+.+||...
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  164 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG  164 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence            988877665       4777888877543211      145667899999999998886543   111356777775332


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHH
Q 015961          149 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA  220 (397)
Q Consensus       149 y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~  220 (397)
                      +..            .         + ....|+..|        .++..+ ...|+++..++|+.|..+  -........
T Consensus       165 ~~~------------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~--~~~~~~~~~  219 (277)
T 3tsc_A          165 MKM------------Q---------P-FMIHYTASKHAVTGLARAFAAEL-GKHSIRVNSVHPGPVNTP--MGSGDMVTA  219 (277)
T ss_dssp             TSC------------C---------S-SCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBSSG--GGSHHHHHH
T ss_pred             CCC------------C---------C-CchhhHHHHHHHHHHHHHHHHHh-CccCeEEEEEEeCCCcCC--cccchhhhh
Confidence            211            0         1 112265432        222222 346899999999999873  111111111


Q ss_pred             HHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          221 LCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       221 ~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      ..............   .....   .. .+.+..++|.++++++...  ...|+++++.+|.
T Consensus       220 ~~~~~~~~~~~~~~---~~~~~---p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          220 VGQAMETNPQLSHV---LTPFL---PD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HHHHHHTCGGGTTT---TCCSS---SC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhhcccccHHHHHH---hhhcc---CC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            10000000000000   00000   11 2445666788888887543  3458899988764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.48  E-value=3.1e-13  Score=121.83  Aligned_cols=215  Identities=10%  Similarity=0.067  Sum_probs=126.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ..+|++|||||+|+||.+++++|++     +|++|+++.++....       . ....++.++.+|++|.++++++++  
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQ-----EGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            3468999999999999999999999     899999985543211       0 112468899999999998877765  


Q ss_pred             -----cCCCeeEEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                           .+|.++|.|+......   +    ..+..+++|+.|+.++++++.....+-.+++++||...+.      ..   
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------~~---  151 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRD------GG---  151 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH------CC---
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhcc------CC---
Confidence                 5677888776431111   1    3466789999999999999977522234677776533220      10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHH-----HHHHhc-CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDIL-----FEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  235 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~l-----~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (397)
                                 .+ ....|+..|..     ..+..+ ..++++..+.|+.|..+-......  ...      .+..... 
T Consensus       152 -----------~~-~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~------~~~~~~~-  210 (259)
T 3edm_A          152 -----------GP-GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEV------RERVAGA-  210 (259)
T ss_dssp             -----------ST-TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------
T ss_pred             -----------CC-CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHH------HHHHHhc-
Confidence                       01 11236543222     221101 123999999999887731110000  000      0000000 


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  282 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~  282 (397)
                               .......+..++|.++++++...  ...|++|++.+|...
T Consensus       211 ---------~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          211 ---------TSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLF  250 (259)
T ss_dssp             -------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSB
T ss_pred             ---------CCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCC
Confidence                     01112234556688888777543  245899999876543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.47  E-value=3.4e-14  Score=127.74  Aligned_cols=158  Identities=15%  Similarity=0.061  Sum_probs=104.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--C--CCCCceEEEccCCCHHHHHHHHcc-----
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLVEYVQCDVSDPEETQAKLSQ-----   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v~~~~~Dl~d~~~l~~~~~~-----   94 (397)
                      ..+|+||||||+|+||++++++|++     +|++|++++|+.....  .  ...++.++.+|++|+++++++++.     
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLG-----EGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999     8999999999753210  0  013678899999999887776654     


Q ss_pred             --CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           95 --LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        95 --~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                        +|.++|+|+.....  .    ++.+..+++|+.++.++.+++...  ..+ .+++++||...+..            .
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~------------~  145 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP------------I  145 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC------------C
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC------------C
Confidence              57788987753221  1    145667899998877666654332  123 78888775432210            0


Q ss_pred             CCCCCCCCCCCCCcchhHHHH-----HHHHHh--cCC--CeeEEEEcCCceeec
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKE--ELSWSVHRPDTIFGF  209 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~--g~~~~ilRp~~v~G~  209 (397)
                               + ....|+..|.     ...+..  ...  |+++.++||+.|+++
T Consensus       146 ---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~  189 (253)
T 1hxh_A          146 ---------E-QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP  189 (253)
T ss_dssp             ---------T-TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred             ---------C-CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCc
Confidence                     1 1123554322     222210  123  899999999999983

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.47  E-value=6.4e-14  Score=124.80  Aligned_cols=158  Identities=13%  Similarity=0.085  Sum_probs=104.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH-------ccCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL-------SQLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~-------~~~~~   97 (397)
                      |+|+||||||+|+||++++++|++     +|++|++++|++.... ...++.++.+|++| +++.+++       .++|.
T Consensus         1 ~~k~vlVTGas~giG~~~a~~l~~-----~G~~V~~~~r~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            1 MERKALVTGGSRGIGRAIAEALVA-----RGYRVAIASRNPEEAA-QSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHH-HHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHH-HhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999     8999999999754310 00136789999998 6554443       36788


Q ss_pred             eeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        98 V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      ++|+|+.....      .++.+..+++|+.++.++++++...  ..+..+++++||...|...          .      
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------  137 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG----------G------  137 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC----------C------
Confidence            88887643211      1145677899999999998887542  1135788888754333110          0      


Q ss_pred             CCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          170 MPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       170 ~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                          +.....|+..|.     ...+.  ....|+++.++||+.+.++
T Consensus       138 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  180 (239)
T 2ekp_A          138 ----PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETE  180 (239)
T ss_dssp             ----TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCc
Confidence                011223654322     22221  1345899999999999883

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.47  E-value=1.4e-13  Score=123.96  Aligned_cols=156  Identities=12%  Similarity=0.075  Sum_probs=107.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--C------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      |+|+||||||+|+||++++++|++     +|++|++++|+...  .      . ....++.++.+|++|.+++.++++  
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   75 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAA-----DGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEA   75 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----HTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999998     89999999997543  1      0 012467899999999988877665  


Q ss_pred             -----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           .+|.++|.|+.....      .++.+..+++|+.|+.++++++...  ..+. .+|+++||...+.      +  
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~--  147 (258)
T 3a28_C           76 AEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ------G--  147 (258)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS------C--
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc------C--
Confidence                 678899987753221      1145667899999999999888653  1123 6788777533221      0  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHH--------HHHHhcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l--------~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                          .         + ....|+..|..        +..+ ...|+++.+++|+.|..
T Consensus       148 ----~---------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~t  189 (258)
T 3a28_C          148 ----F---------P-ILSAYSTTKFAVRGLTQAAAQEL-APKGHTVNAYAPGIVGT  189 (258)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBCS
T ss_pred             ----C---------C-CchhHHHHHHHHHHHHHHHHHHH-HhhCeEEEEEECCccCC
Confidence                0         1 11225543222        2222 34689999999999876

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.47  E-value=3.3e-13  Score=123.27  Aligned_cols=159  Identities=15%  Similarity=-0.024  Sum_probs=108.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|.+++..+++   
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGR-----RGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321       0 012467889999999987766554   


Q ss_pred             ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                          .+|.++|+|+.....      .++.+..+++|+.|+.++++++...-.+..+++++||...+.      +      
T Consensus       103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~------  170 (283)
T 1g0o_A          103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA------K------  170 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC------S------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhcc------C------
Confidence                578889987753221      114567789999999999999877522346788777532211      1      


Q ss_pred             CCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                      .         +.....|+..|.     ...+.  ....|+++.+++|+.|.++
T Consensus       171 ~---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  214 (283)
T 1g0o_A          171 A---------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  214 (283)
T ss_dssp             S---------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             C---------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence            0         001223654332     22211  1346899999999999883

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.47  E-value=7.2e-13  Score=120.19  Aligned_cols=158  Identities=13%  Similarity=0.024  Sum_probs=107.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ..+|++|||||+|+||++++++|++     +|++|++++|+....       . ....++.++.+|++|.+++.++++  
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGR-----LGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            4568999999999999999999999     899999988764221       0 012468899999999988877665  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                           .+|.++|.|+......      ++.+..+++|+.|+.++++++...-.+-.+++++||....     ..      
T Consensus        91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~-----~~------  159 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK-----DF------  159 (270)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT-----TC------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc-----cC------
Confidence                 5677888877533211      1456778999999999999887753333467777642100     00      


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                              + .+ ....|+..|.        ++..+ ...|+++..++|+.|..
T Consensus       160 --------~-~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T  202 (270)
T 3is3_A          160 --------S-VP-KHSLYSGSKGAVDSFVRIFSKDC-GDKKITVNAVAPGGTVT  202 (270)
T ss_dssp             --------C-CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             --------C-CC-CCchhHHHHHHHHHHHHHHHHHh-cccCeEEEEEEeCCccC
Confidence                    0 01 1223654322        22222 34689999999999987

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.47  E-value=8.3e-14  Score=129.50  Aligned_cols=158  Identities=19%  Similarity=0.082  Sum_probs=106.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....         ......+.++.+|++|.+++.++++. 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~-----~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLN-----QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            457999999999999999999999     899999999975321         00112678999999999988777753 


Q ss_pred             ------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC--------CCcceEEEecCCcccccccc
Q 015961           95 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--------PNLRHVCLQTGTKHYLGPFE  154 (397)
Q Consensus        95 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~~~~~~~s~~~~y~ss~~  154 (397)
                            +|.|+|.|+......      ++....+++|+.|+.++++++....        .+-.+|+++||...+.+   
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~---  158 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA---  158 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC---
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC---
Confidence                  466888776432211      1456688999999999999886541        12346887775332211   


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCcchhHHHH----HHHHH---hcCCCeeEEEEcCCceeec
Q 015961          155 AFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI----LFEEV---EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       155 ~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~----l~~~~---~~~~g~~~~ilRp~~v~G~  209 (397)
                               .         + ....|+..|.    +.+.+   ....|+++++++|+.|.++
T Consensus       159 ---------~---------~-~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~  201 (319)
T 3ioy_A          159 ---------A---------G-SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSY  201 (319)
T ss_dssp             ---------C---------S-SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--
T ss_pred             ---------C---------C-CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccC
Confidence                     0         1 1123665444    22211   1356899999999999873

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.47  E-value=3.6e-12  Score=117.35  Aligned_cols=157  Identities=16%  Similarity=0.079  Sum_probs=107.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------------------CCCCCCceEEEccCCCH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------------WNADHLVEYVQCDVSDP   85 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~~~~v~~~~~Dl~d~   85 (397)
                      .+|++|||||+|.||.+++++|++     .|++|++++|++...                   .....++.++.+|++|.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAR-----EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF  101 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence            357999999999999999999999     899999999873210                   00124678999999999


Q ss_pred             HHHHHHHc-------cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCcc
Q 015961           86 EETQAKLS-------QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKH  148 (397)
Q Consensus        86 ~~l~~~~~-------~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~  148 (397)
                      +++.++++       .+|.++|.|+......       ++.+..+++|+.|+.++++++...   ..+..+|+++||...
T Consensus       102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~  181 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG  181 (299)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh
Confidence            88877665       5777888877533211       145678899999999999987553   122467887775332


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeec
Q 015961          149 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       149 y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                      +.+            .         + ....|+..|        .++..+ ...|+++..++|+.|..+
T Consensus       182 ~~~------------~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~  227 (299)
T 3t7c_A          182 LRG------------A---------E-NIGNYIASKHGLHGLMRTMALEL-GPRNIRVNIVCPSSVATP  227 (299)
T ss_dssp             TSC------------C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCBSST
T ss_pred             ccC------------C---------C-CcchHHHHHHHHHHHHHHHHHHh-cccCcEEEEEecCCccCc
Confidence            211            0         1 112265432        222222 345899999999999883

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.46  E-value=2e-13  Score=123.59  Aligned_cols=156  Identities=17%  Similarity=0.044  Sum_probs=105.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      .   ....++.++.+|++|.+++.++++  
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAA-----EGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0   002467889999999998877765  


Q ss_pred             -----cCCCeeEEEEeccc-C------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWT-N------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~-~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           .+|.++|+|+.... .      .++.+..+++|+.|+.++++++...  ..+..+|+++||...+.      +  
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~--  158 (267)
T 1iy8_A           87 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR------G--  158 (267)
T ss_dssp             HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------B--
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc------C--
Confidence                 57889998774322 1      0145667899999988766655332  11246788777533221      1  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHH-----H---HHHHhcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                          .         + ....|+..|.     .   +... ...|+++.+++|+.|.+
T Consensus       159 ----~---------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~t  200 (267)
T 1iy8_A          159 ----I---------G-NQSGYAAAKHGVVGLTRNSAVEY-GRYGIRINAIAPGAIWT  200 (267)
T ss_dssp             ----C---------S-SBHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             ----C---------C-CCccHHHHHHHHHHHHHHHHHHH-HhcCeEEEEEEeCCCcC
Confidence                0         1 1122554322     2   2222 34689999999999987

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.46  E-value=1.3e-13  Score=124.45  Aligned_cols=157  Identities=18%  Similarity=0.124  Sum_probs=105.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---   94 (397)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|.+++.++++.   
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGS-----LGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999975321      0 0124678999999999988776653   


Q ss_pred             ----CCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           95 ----LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          +|.|+|+|+......       ++....+++|+.|+.++++++...  ..+..+|+++||...+..          
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------  172 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP----------  172 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC----------
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC----------
Confidence                677889877522111       144667899999999999887542  123467887775322210          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                                . + ....|+..|     +...+.  ....|+++.+++|+.|..
T Consensus       173 ----------~-~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t  214 (262)
T 3rkr_A          173 ----------V-A-DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRT  214 (262)
T ss_dssp             ----------C-T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--
T ss_pred             ----------C-C-CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcC
Confidence                      0 1 112365432     222221  135689999999998876

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.46  E-value=1.8e-13  Score=122.51  Aligned_cols=158  Identities=16%  Similarity=0.072  Sum_probs=108.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ..+|++|||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|.++++++++      
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAA-----DGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            3568999999999999999999999     8999999999753210    002467889999999988877665      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                       .+|.++|.|+......      ++.+..+++|+.|+.++++++...   .....+++++||...+.+.           
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  147 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-----------  147 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----------
Confidence             5788888877532211      145667899999999998885432   1124677877754333110           


Q ss_pred             CCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeec
Q 015961          164 PPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                                + ....|+..|        .++... ...|+++..++|+.|..+
T Consensus       148 ----------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~t~  189 (247)
T 3rwb_A          148 ----------P-NMAAYVAAKGGVIGFTRALATEL-GKYNITANAVTPGLIESD  189 (247)
T ss_dssp             ----------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCH
T ss_pred             ----------C-CchhhHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCcCcCc
Confidence                      1 112265432        222222 346899999999999873

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.46  E-value=5.3e-13  Score=120.84  Aligned_cols=158  Identities=15%  Similarity=0.020  Sum_probs=106.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ++|+||||||+|+||++++++|++     +|++|++++|+....      .  ....++.++.+|++|++++.++++   
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAE-----AGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0  002357789999999988877665   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|+|+......      +..+..+++|+.|+.++++++...  ..+..+|+++||..+        +.   
T Consensus        95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--------~~---  163 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV--------EE---  163 (267)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG--------TC---
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcch--------hc---
Confidence                5788899877532211      134567899999999998877442  123567887774320        10   


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                        .+      . + ....|+..|.     ...+.  ....|+++.+++|+.|..
T Consensus       164 --~~------~-~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T  207 (267)
T 1vl8_A          164 --VT------M-P-NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRT  207 (267)
T ss_dssp             --CC------S-S-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCS
T ss_pred             --cC------C-C-CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcc
Confidence              00      0 1 1123554322     22221  134689999999999987

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.46  E-value=1.5e-13  Score=125.41  Aligned_cols=159  Identities=11%  Similarity=0.066  Sum_probs=108.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCC---CceEEEccCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADH---LVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~---~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      .++|+||||||+|+||++++++|++     +|++|++++|+....      . ....   ++.++.+|++|+++++++++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   78 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQ-----EGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIIN   78 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321      0 0011   67889999999988777665


Q ss_pred             -------cCCCeeEEEEecccCC----------CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCcccccccc
Q 015961           94 -------QLTDVTHIFYVTWTNR----------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFE  154 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~~----------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~  154 (397)
                             .+|.++|+|+......          +..+..+++|+.++.++++++....  .+ .+++++||...+..   
T Consensus        79 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~---  154 (280)
T 1xkq_A           79 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQ---  154 (280)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSS---
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCC---
Confidence                   5788999887532211          1356678999999999999887531  12 67887775332210   


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeec
Q 015961          155 AFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       155 ~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~  209 (397)
                               .        .+ ....|+..|.     ...+.  ....|+++.+++|+.|.++
T Consensus       155 ---------~--------~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  198 (280)
T 1xkq_A          155 ---------A--------QP-DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  198 (280)
T ss_dssp             ---------C--------CC-SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             ---------C--------CC-cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCC
Confidence                     0        01 1223654332     22211  1356899999999999983

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.45  E-value=4.1e-13  Score=120.15  Aligned_cols=156  Identities=20%  Similarity=0.146  Sum_probs=107.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .++|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|++++.++++   
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   79 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAA-----EGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTV   79 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321      0 012467889999999988877665   


Q ss_pred             ----cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|.|+.....  .    ++.+..+++|+.|+.++++++....  .+ .+++++||...+.      +    
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~------~----  148 (247)
T 2jah_A           80 EALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV------N----  148 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC------C----
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC------C----
Confidence                578888987743211  1    1345678999999999999876531  12 5788777532221      0    


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 .+ ....|+..|        .++... ...|+++.+++|+.|..
T Consensus       149 -----------~~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~T  190 (247)
T 2jah_A          149 -----------VR-NAAVYQATKFGVNAFSETLRQEV-TERGVRVVVIEPGTTDT  190 (247)
T ss_dssp             -----------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBSS
T ss_pred             -----------CC-CCcHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEECCCCCC
Confidence                       01 112355432        222222 45689999999999987

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.45  E-value=7.3e-13  Score=120.43  Aligned_cols=156  Identities=13%  Similarity=0.091  Sum_probs=106.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+.....       ....++.++.+|++|.+++..+++    
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAG-----AGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999     8999999999765420       012468899999999987776665    


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.++|.|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+.             
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-------------  173 (275)
T 4imr_A          107 IAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-------------  173 (275)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-------------
Confidence              5777888876432211      134667899999999999987442  11245777776532221             


Q ss_pred             CCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                             +. + ....|+..|.        ++..+ ...|+++..++|+.|..
T Consensus       174 -------~~-~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  216 (275)
T 4imr_A          174 -------PK-S-VVTAYAATKAAQHNLIQSQARDF-AGDNVLLNTLAPGLVDT  216 (275)
T ss_dssp             -------CC-T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBCS
T ss_pred             -------CC-C-CchhhHHHHHHHHHHHHHHHHHh-cccCcEEEEEEeccccC
Confidence                   00 0 1122554322        22222 34589999999999987

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.45  E-value=1.4e-12  Score=118.11  Aligned_cols=157  Identities=12%  Similarity=0.060  Sum_probs=104.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....         ......+..+.+|++|.+++.++++  
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVA-----EGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY   83 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc
Confidence            357999999999999999999999     899999999975321         0012356789999999998887776  


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+++++||...+..            .
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~  151 (267)
T 3t4x_A           84 PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP------------S  151 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC------------C
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC------------C
Confidence             4677888876432211      134556899999987777766442  123567887775332210            0


Q ss_pred             CCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                               + ....|+..|.     ...+.  ....|+++..++|+.+..
T Consensus       152 ---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t  192 (267)
T 3t4x_A          152 ---------Q-EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLT  192 (267)
T ss_dssp             ---------T-TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCC
T ss_pred             ---------C-cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecC
Confidence                     1 1223654322     22221  134579999999999887

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.45  E-value=1.3e-12  Score=118.26  Aligned_cols=157  Identities=12%  Similarity=-0.036  Sum_probs=106.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+....      .   ....++.++.+|++|.+++.++++  
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLE-----AGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0   112348899999999988766654  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           .+|.++|.|+......      ++.+..+++|+.++.++++++...  ..+-.+|+++||...+.      +   
T Consensus        82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~---  152 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ------P---  152 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS------C---
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC------C---
Confidence                 5677888877532211      145667899999999999988553  12245677776432221      0   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceeec
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                         .         + ....|+..|        .++..+ ...|+++..++|+.|..+
T Consensus       153 ---~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~t~  195 (265)
T 3lf2_A          153 ---E---------P-HMVATSAARAGVKNLVRSMAFEF-APKGVRVNGILIGLVESG  195 (265)
T ss_dssp             ---C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCH
T ss_pred             ---C---------C-CchhhHHHHHHHHHHHHHHHHHh-cccCeEEEEEEeCcCcCc
Confidence               0         1 122355422        222222 456899999999999873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.44  E-value=2.3e-13  Score=123.81  Aligned_cols=212  Identities=15%  Similarity=0.120  Sum_probs=128.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc------
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      +|+||||||+|+||++++++|++     +|++|++++|+....      .....++.++.+|++|.++++++++      
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLE-----AGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999     899999999975321      1111267888999999988877765      


Q ss_pred             -cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc----C--CCcceEEEecCCccccccccccCCCC
Q 015961           94 -QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN----A--PNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~----~--~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                       .+|.++|+|+.....      .++.+..+++|+.|+.++++++...    +  ....+|+++||...+..         
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~---------  174 (276)
T 2b4q_A          104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA---------  174 (276)
T ss_dssp             SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC---------
Confidence             577788887753221      1245678899999998887776432    2  12368888875432211         


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                         .         +...+.|+..|     +...+.  ....|+++.+++|+.|..  +-. .......  ...+......
T Consensus       175 ---~---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T--~~~-~~~~~~~--~~~~~~~~~~  237 (276)
T 2b4q_A          175 ---M---------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPS--RMT-RHIANDP--QALEADSASI  237 (276)
T ss_dssp             ---C---------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCS--TTT-HHHHHCH--HHHHHHHHTS
T ss_pred             ---C---------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcC--cch-hhcchhH--HHHHHhhcCC
Confidence               0         00111255432     222221  134689999999999987  211 0110000  0001110011


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                      |+            ....+..++|.++++++..+  ...|+++++.+|.
T Consensus       238 p~------------~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          238 PM------------GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             TT------------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CC------------CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            21            01234556688888776543  3458888887763

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.44  E-value=1.8e-12  Score=116.93  Aligned_cols=162  Identities=13%  Similarity=0.038  Sum_probs=105.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------C-CCCCCceEEEccCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ..+|++|||||+|.||.+++++|++     +|++|++++|.....         . ....++.++.+|++|.+++.++++
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFAL-----ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTT-----SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            4568999999999999999999999     899999998753210         0 012467889999999998877765


Q ss_pred             -------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC
Q 015961           94 -------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                             .+|.++|.|+......      ++.+..+++|+.|+.++++++...-.+-.+++++||...+...        
T Consensus        84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~--------  155 (262)
T 3ksu_A           84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT--------  155 (262)
T ss_dssp             HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH--------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC--------
Confidence                   4667888776432211      1345678899999999999887642224567777754433211        


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHH---HHHHHHhcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLED---ILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~---~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                        ..       ...+.....+.+.   .++..+ ...|+++..+.|+.|..
T Consensus       156 --~~-------~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~T  196 (262)
T 3ksu_A          156 --GF-------YSTYAGNKAPVEHYTRAASKEL-MKQQISVNAIAPGPMDT  196 (262)
T ss_dssp             --CC-------CCC-----CHHHHHHHHHHHHT-TTTTCEEEEEEECCCCT
T ss_pred             --CC-------CchhHHHHHHHHHHHHHHHHHH-HHcCcEEEEEeeCCCcC
Confidence              00       0010111122232   233222 34689999999998865

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.44  E-value=1.3e-12  Score=115.90  Aligned_cols=156  Identities=17%  Similarity=0.069  Sum_probs=104.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|+||||||+|+||++++++|++     +|++|++++|+....      .  ....++.++.+|++|++++.++++    
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALAR-----DGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE   76 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence            47899999999999999999999     899999999975321      0  012468899999999998877765    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                         .+|.++|+|+......      ++....+++|+.|+.++++++...- .+-.+++.++|...      .++      
T Consensus        77 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~------~~~------  144 (235)
T 3l77_A           77 RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVS------ARL------  144 (235)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG------SSC------
T ss_pred             hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchh------ccc------
Confidence               5777889877543221      1456678999999999999886530 01233444442111      111      


Q ss_pred             CCCCCCCCCCCCCCcchhHHH-----HHHHHHhcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTLED-----ILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      .         +. ...|+..|     +...+..+..++++..++|+.|-.
T Consensus       145 ~---------~~-~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T  184 (235)
T 3l77_A          145 I---------PY-GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDT  184 (235)
T ss_dssp             C---------TT-CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSS
T ss_pred             C---------CC-cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccc
Confidence            0         11 12255433     223222245689999999998866

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.44  E-value=5.1e-13  Score=121.25  Aligned_cols=157  Identities=12%  Similarity=-0.001  Sum_probs=105.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      .++|++|||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|.+++.++++      
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAG-----AGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3568899999999999999999999     8999999999753210    001467899999999998877765      


Q ss_pred             -cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                       .+|.++|+|+......       ++.+..+++|+.|+.++++++...    +.+-.+|+++||...+.      +    
T Consensus       101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------~----  170 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS------P----  170 (272)
T ss_dssp             SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS------C----
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC------C----
Confidence             6788999887532211       134677899999988888877553    11135777776432221      0    


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 .+ ....|+..|.        ++... ...|+++..++|+.|..
T Consensus       171 -----------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  212 (272)
T 4dyv_A          171 -----------RP-YSAPYTATKHAITGLTKSTSLDG-RVHDIACGQIDIGNADT  212 (272)
T ss_dssp             -----------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEEECC-
T ss_pred             -----------CC-CchHHHHHHHHHHHHHHHHHHHh-CccCEEEEEEEECcccC
Confidence                       01 1122554222        22222 34689999999998887

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.43  E-value=1.5e-12  Score=116.87  Aligned_cols=118  Identities=13%  Similarity=0.099  Sum_probs=86.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccC--CCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDV--SDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl--~d~~~l~~~~~   93 (397)
                      ..+|+||||||+|+||.+++++|++     .|++|++++|+....      .  .....+.++.+|+  +|.+++.++++
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYAR-----YGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ   84 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHH
Confidence            4568999999999999999999998     899999999975321      0  0112678899999  88887766665


Q ss_pred             -------cCCCeeEEEEeccc--C-CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCC
Q 015961           94 -------QLTDVTHIFYVTWT--N-RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT  146 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~--~-~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~  146 (397)
                             .+|.++|.|+....  . .+    ..+..+++|+.|+.++++++...  ..+..+|+++||.
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~  153 (252)
T 3f1l_A           85 RIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSS  153 (252)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECCh
Confidence                   57778888775321  1 11    34567899999999999988432  1234677777753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.43  E-value=1.1e-12  Score=117.80  Aligned_cols=212  Identities=9%  Similarity=0.030  Sum_probs=127.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      ..+|+||||||+|+||.+++++|++     .|++|+++.++....       . .....+.++.+|++|.++++..++. 
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLAN-----DGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL   79 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH
Confidence            3468999999999999999999999     899998875543211       0 0124577899999999877666543 


Q ss_pred             ------------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccccccccc
Q 015961           95 ------------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        95 ------------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                                  +|.++|.|+......      +..+..+++|+.++.++++++...-.+-.+++++||...+.      
T Consensus        80 ~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~------  153 (255)
T 3icc_A           80 DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI------  153 (255)
T ss_dssp             HHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS------
T ss_pred             HHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc------
Confidence                        666788766432111      13456789999999999999876422234677776532221      


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhHHHHH--------HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHh
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC  228 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l--------~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~  228 (397)
                      +      .         | ....|+..|..        +..+ ...|+++..++|+.|..+-....... .....+   .
T Consensus       154 ~------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~---~  212 (255)
T 3icc_A          154 S------L---------P-DFIAYSMTKGAINTMTFTLAKQL-GARGITVNAILPGFVKTDMNAELLSD-PMMKQY---A  212 (255)
T ss_dssp             C------C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBCCSSSTTTTTS-HHHHHH---H
T ss_pred             C------C---------C-CcchhHHhHHHHHHHHHHHHHHH-HhcCeEEEEEEEeeecccchhhhccc-HHHHHh---h
Confidence            0      0         1 12236543222        2222 34689999999999987422111110 111000   0


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCC
Q 015961          229 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGD  280 (397)
Q Consensus       229 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~  280 (397)
                      . ...++            ....+..++|..+++++..  ....|+++++.+|.
T Consensus       213 ~-~~~~~------------~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          213 T-TISAF------------NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             H-HTSTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             h-ccCCc------------CCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            1 11121            1122345557777777643  23568999998764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.43  E-value=2.6e-13  Score=122.52  Aligned_cols=156  Identities=15%  Similarity=0.053  Sum_probs=106.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|++++..+++    
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAE-----EGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 012367889999999988766655    


Q ss_pred             ---cCCCeeEEEEec-cc-C-----CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVT-WT-N-----RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~-~~-~-----~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|+|+.. .. .     .++.+..+++|+.++.++++++...  ..+..+|+++||...+.      +    
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~----  150 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK------G----  150 (262)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS------C----
T ss_pred             HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------C----
Confidence               678889987643 11 1     1134667899999999999887653  11246788777543221      1    


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                        .         + ....|+..|        .++..+ ...|+++.+++|+.|..
T Consensus       151 --~---------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~t  192 (262)
T 1zem_A          151 --P---------P-NMAAYGTSKGAIIALTETAALDL-APYNIRVNAISPGYMGP  192 (262)
T ss_dssp             --C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             --C---------C-CCchHHHHHHHHHHHHHHHHHHH-HhhCeEEEEEecCCcCc
Confidence              0         1 112255432        222222 45689999999998865

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.43  E-value=9.4e-13  Score=119.19  Aligned_cols=209  Identities=13%  Similarity=0.019  Sum_probs=123.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|++|||||+|+||.+++++|++     +|++|+++.++....        .....++.++.+|++|.++++++++    
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~-----~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLAS-----DGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHH-----HTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999     899999886543311        0012467889999999988877665    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                         .+|.++|.|+......      +..+..+++|+.|+.++++++...-.+-.+++++||...+..            .
T Consensus       102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~  169 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL------------H  169 (267)
T ss_dssp             HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC------------C
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC------------C
Confidence               5667888776432111      134567789999999999888654211246777765332211            0


Q ss_pred             CCCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  237 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (397)
                               + ....|+..|.     ...+.  ....|+++..+.|+.|..+-......  .....  .+.  ...|+  
T Consensus       170 ---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~--~~~--~~~p~--  231 (267)
T 3u5t_A          170 ---------P-SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS--DEVRD--RFA--KLAPL--  231 (267)
T ss_dssp             ---------T-TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHH--HHH--TSSTT--
T ss_pred             ---------C-CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC--HHHHH--HHH--hcCCC--
Confidence                     1 1122654322     22222  13458999999999987631111000  00000  001  01121  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCC
Q 015961          238 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNG  279 (397)
Q Consensus       238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~  279 (397)
                                ....+..++|.++++++....  ..|+++++.+|
T Consensus       232 ----------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          232 ----------ERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             ----------CSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             ----------CCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence                      122345566888888775433  35788888765

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.43  E-value=3.6e-12  Score=116.50  Aligned_cols=116  Identities=15%  Similarity=0.055  Sum_probs=87.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------------ADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--------------~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+......              ...++.++.+|++|.+++.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAA-----DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHT-----TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            357999999999999999999999     89999999998653110              02357889999999988877


Q ss_pred             HHc-------cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961           91 KLS-------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  145 (397)
Q Consensus        91 ~~~-------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  145 (397)
                      +++       .+|.++|+|+......  +    ..+..+++|+.|+.++++++...-  .+..+++++||
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS  152 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP  152 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence            665       6777888877532211  1    345677899999999999887652  23457887764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.43  E-value=4.3e-13  Score=123.67  Aligned_cols=155  Identities=14%  Similarity=0.026  Sum_probs=107.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|.+++.++++     
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFAR-----RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999     899999999975321      0 012468899999999998877765     


Q ss_pred             --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                        .+|.++|+|+.....      .++....+++|+.|+.++++++...   .....+|+++||...+.+           
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  174 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----------  174 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------
Confidence              578889987753221      1145668899999999999987543   111357777775332210           


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                       .         + ....|+..|.        ++... ...|+++.+++|+.|..
T Consensus       175 -~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T  216 (301)
T 3tjr_A          175 -N---------A-GLGTYGVAKYGVVGLAETLAREV-KPNGIGVSVLCPMVVET  216 (301)
T ss_dssp             -C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEECCSCCCS
T ss_pred             -C---------C-CchHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEECCcccc
Confidence             0         1 1223664332        22222 44689999999998876

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.42  E-value=8.6e-13  Score=118.57  Aligned_cols=157  Identities=16%  Similarity=0.144  Sum_probs=105.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCC--CC--CCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPN--WN--ADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~--~~--~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      |+|++|||||+|+||++++++|++     .  |+.|++++|+....  ..  ...++.++.+|++|.+++.++++     
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~-----~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFS-----LDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHH-----HCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHh-----cCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999987     4  57899999875321  00  01367889999999988877665     


Q ss_pred             --cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                        .+|.++|.|+......       ++.+..+++|+.|+.++++++...  ..+ .+++++||...+..           
T Consensus        76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~-----------  143 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY-----------  143 (254)
T ss_dssp             HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS-----------
T ss_pred             cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC-----------
Confidence              5788999887532211       144667899999999999988432  011 56777764322210           


Q ss_pred             CCCCCCCCCCCCCCCcchhHHH-----HHHHHHhcCCCeeEEEEcCCceeec
Q 015961          163 DPPFTEDMPRLDAPNFYYTLED-----ILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                                .+ ....|+..|     +...+..+..++++..++|+.|..+
T Consensus       144 ----------~~-~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~  184 (254)
T 3kzv_A          144 ----------FS-SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTD  184 (254)
T ss_dssp             ----------SC-CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCC
T ss_pred             ----------CC-CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccch
Confidence                      01 122366433     3333322335899999999999884

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.41  E-value=1.1e-12  Score=122.32  Aligned_cols=208  Identities=15%  Similarity=0.073  Sum_probs=128.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCC------C--CCCCCceEEEccCCCHH----------
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W--NADHLVEYVQCDVSDPE----------   86 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~------~--~~~~~v~~~~~Dl~d~~----------   86 (397)
                      +|+||||||+|+||.+++++|++     +|++|++++ |+....      .  ....++.++.+|++|.+          
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~-----~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHA-----EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence            57899999999999999999998     899999999 764211      0  01246889999999988          


Q ss_pred             -------HHHHHHc-------cCCCeeEEEEecccC--------------------CCcHHHHHHhHHHHHHHHHHHHcc
Q 015961           87 -------ETQAKLS-------QLTDVTHIFYVTWTN--------------------RSTEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        87 -------~l~~~~~-------~~~~V~h~a~~~~~~--------------------~~~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                             ++.++++       .+|.++|+|+.....                    .+.....+++|+.++.++++++..
T Consensus       121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   7777665       678889987753211                    112345679999999999888764


Q ss_pred             c--CCC------cceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCe
Q 015961          133 N--APN------LRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEEL  196 (397)
Q Consensus       133 ~--~~~------~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~  196 (397)
                      .  ..+      ..+|+++||...+..                     .+ ....|+..|.        ++..+ ...|+
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~~~---------------------~~-~~~~Y~asKaal~~l~~~la~el-~~~gI  257 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTNQP---------------------LL-GYTIYTMAKGALEGLTRSAALEL-APLQI  257 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTTSC---------------------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTE
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhccC---------------------CC-CcHHHHHHHHHHHHHHHHHHHHH-hhcCc
Confidence            3  112      467887775322210                     01 1123554322        22222 34689


Q ss_pred             eEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCce
Q 015961          197 SWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAF  274 (397)
Q Consensus       197 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~y  274 (397)
                      ++.+++|+.|..+- ..   . ....  ..+..  ..|+   +.        ...+..++|.++++++..  ....|+++
T Consensus       258 rvn~v~PG~v~T~~-~~---~-~~~~--~~~~~--~~p~---~~--------r~~~pedvA~~v~~l~s~~~~~itG~~i  317 (328)
T 2qhx_A          258 RVNGVGPGLSVLVD-DM---P-PAVW--EGHRS--KVPL---YQ--------RDSSAAEVSDVVIFLCSSKAKYITGTCV  317 (328)
T ss_dssp             EEEEEEESSBSCCC-CS---C-HHHH--HHHHT--TCTT---TT--------SCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             EEEEEecCcccCCc-cc---c-HHHH--HHHHh--hCCC---CC--------CCCCHHHHHHHHHHHhCccccCccCcEE
Confidence            99999999998842 11   1 1110  00111  1221   10        122445668888887753  23458888


Q ss_pred             eccCCCe
Q 015961          275 NCNNGDV  281 (397)
Q Consensus       275 ni~~~~~  281 (397)
                      ++.+|..
T Consensus       318 ~vdGG~~  324 (328)
T 2qhx_A          318 KVDGGYS  324 (328)
T ss_dssp             EESTTGG
T ss_pred             EECCCcc
Confidence            8887643

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.41  E-value=3.8e-13  Score=123.10  Aligned_cols=158  Identities=11%  Similarity=0.006  Sum_probs=104.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ..+++||||||+|+||++++++|++     +|++|++++|+.....        ....++.++.+|++|.+++..+++  
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  100 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAK-----MGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA  100 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence            3468999999999999999999998     8999999999753210        011257889999999988776665  


Q ss_pred             -----cCCCeeEE-EEecccC---C--CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCC
Q 015961           94 -----QLTDVTHI-FYVTWTN---R--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 -----~~~~V~h~-a~~~~~~---~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                           ++|.++|+ ++.....   .  +.....+++|+.|+.++++++.... ....+++++||...+.      +    
T Consensus       101 ~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~------~----  170 (286)
T 1xu9_A          101 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV------A----  170 (286)
T ss_dssp             HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS------C----
T ss_pred             HHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc------C----
Confidence                 57888888 3432211   1  1346678999999999988876531 1124677776432221      0    


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHH----hcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV----EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~----~~~~g~~~~ilRp~~v~G  208 (397)
                        .         + ....|+..|.     ...+.    .+..++++++++|+.|..
T Consensus       171 --~---------~-~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t  214 (286)
T 1xu9_A          171 --Y---------P-MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT  214 (286)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred             --C---------C-CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCC
Confidence              0         1 1223654322     22211    134589999999998876

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.41  E-value=8.2e-13  Score=121.00  Aligned_cols=208  Identities=12%  Similarity=0.068  Sum_probs=128.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC-CCC------C--CCCCCceEEEccCCC----HHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN------W--NADHLVEYVQCDVSD----PEETQAK   91 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~------~--~~~~~v~~~~~Dl~d----~~~l~~~   91 (397)
                      .+|++|||||+|+||.+++++|++     .|++|++++|+. ...      .  ....++.++.+|++|    .+++.++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~-----~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~   96 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQ-----TGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEI   96 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHH-----HTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHH
Confidence            357999999999999999999998     899999999986 211      0  012467899999999    8877666


Q ss_pred             Hc-------cCCCeeEEEEecccC--------C-----C---cHHHHHHhHHHHHHHHHHHHcccCC--C------cceE
Q 015961           92 LS-------QLTDVTHIFYVTWTN--------R-----S---TEAENCKINGSMFRNVLRAVIPNAP--N------LRHV  140 (397)
Q Consensus        92 ~~-------~~~~V~h~a~~~~~~--------~-----~---~~~~~~~~nv~gt~~ll~a~~~~~~--~------~~~~  140 (397)
                      ++       .+|.++|+|+.....        .     .   .....+++|+.++.++++++.....  +      ..+|
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           97 INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence            54       678899988753211        1     1   2345788999999999888765421  1      3577


Q ss_pred             EEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----H---HHHHhcCCCeeEEEEcCCceeeccCC
Q 015961          141 CLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPY  212 (397)
Q Consensus       141 ~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~g~~~~ilRp~~v~G~~~~  212 (397)
                      +++||...+..                     .+ ....|+..|.     .   +..+ ...|+++.+++|+.|.++- .
T Consensus       177 v~isS~~~~~~---------------------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~~-~  232 (288)
T 2x9g_A          177 VNLCDAMVDQP---------------------CM-AFSLYNMGKHALVGLTQSAALEL-APYGIRVNGVAPGVSLLPV-A  232 (288)
T ss_dssp             EEECCTTTTSC---------------------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSCSCCT-T
T ss_pred             EEEecccccCC---------------------CC-CCchHHHHHHHHHHHHHHHHHHh-hccCeEEEEEEeccccCcc-c
Confidence            77764322210                     01 1223664332     2   2222 3458999999999999843 1


Q ss_pred             CcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          213 SLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       213 ~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                       ...  ....   ...+  ..|+   +      .+  .....++|..+++++...  ...|+.+++.+|.
T Consensus       233 -~~~--~~~~---~~~~--~~p~---~------r~--~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          233 -MGE--EEKD---KWRR--KVPL---G------RR--EASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             -SCH--HHHH---HHHH--TCTT---T------SS--CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -cCh--HHHH---HHHh--hCCC---C------CC--CCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence             111  1110   0111  1221   1      01  024455678887776542  3457888887764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.41  E-value=3.6e-13  Score=122.29  Aligned_cols=157  Identities=14%  Similarity=0.061  Sum_probs=104.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccC---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQL---   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~---   95 (397)
                      |.|+||||||+|+||.+++++|++     +|++|++++|+....      .....++.++.+|++|.+++.++++.+   
T Consensus        20 ~~k~vlVTGas~gIG~aia~~La~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           20 MSSTLFITGATSGFGEACARRFAE-----AGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             -CCEEEESSTTTSSHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             cCcEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            448999999999999999999999     899999999975321      101136889999999999998888764   


Q ss_pred             ----CCeeEEEEeccc--C-----CCcHHHHHHhHHHHHHHHHHHHccc--CCCcc-eEEEecCCccccccccccCCCCC
Q 015961           96 ----TDVTHIFYVTWT--N-----RSTEAENCKINGSMFRNVLRAVIPN--APNLR-HVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        96 ----~~V~h~a~~~~~--~-----~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~-~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          |.++|.|+....  .     .++.+..+++|+.|+.++++++...  ..+.. +|+++||...+..          
T Consensus        95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~----------  164 (272)
T 2nwq_A           95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP----------  164 (272)
T ss_dssp             GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC----------
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC----------
Confidence                668888764321  1     1145667899999988877766432  01234 7777775332210          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHHh--cCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~g~~~~ilRp~~v~G  208 (397)
                                 .+ ....|+..|.     ...+..  ...|+++.+++|+.|..
T Consensus       165 -----------~~-~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T  206 (272)
T 2nwq_A          165 -----------YP-GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCES  206 (272)
T ss_dssp             -----------CT-TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-
T ss_pred             -----------CC-CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcC
Confidence                       01 1123664333     222221  23579999999999987

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.40  E-value=1.2e-12  Score=115.71  Aligned_cols=155  Identities=17%  Similarity=0.099  Sum_probs=103.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHccC----CCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQL----TDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~V   98 (397)
                      |+||||||+|+||++++++|++     +|++|++++|+....    .....++.++.+|++|.+++.++++.+    |.+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDA-----EGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            6799999999999999999999     899999999975321    001246889999999999999988776    568


Q ss_pred             eEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        99 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      +|+|+......      ++....+++|+.|+.++++++... ...-.+++++||...+..                    
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~--------------------  136 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP--------------------  136 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC--------------------
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC--------------------
Confidence            88876432211      134567899999999999987654 111227777765332210                    


Q ss_pred             CCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          172 RLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       172 ~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                       .+ ....|+..|.     ...+.  ....|+++..++|+.|..
T Consensus       137 -~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t  178 (230)
T 3guy_A          137 -KA-QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMAT  178 (230)
T ss_dssp             -CT-TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--
T ss_pred             -CC-CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccC
Confidence             01 1123654322     22221  134589999999998876

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.39  E-value=9.3e-13  Score=118.20  Aligned_cols=156  Identities=10%  Similarity=0.010  Sum_probs=101.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+.....       ....++.++.+|++|.+++..+++    
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAA-----EGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHH-----TTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            457899999999999999999999     8999999999764310       012467899999999998877776    


Q ss_pred             --cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.++|.|+.....    .  ++....+++|+.|+.++++++...  ..+..+++++||...+.      +      
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------  148 (252)
T 3h7a_A           81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR------G------  148 (252)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC------C------
T ss_pred             hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC------C------
Confidence              456788887643221    1  145667899999999988877542  11235677666432221      1      


Q ss_pred             CCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeE-EEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSW-SVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~-~ilRp~~v~G  208 (397)
                      .         + ....|+..|        .++... ...|+++ .++.|+.|..
T Consensus       149 ~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~v~n~v~PG~v~T  191 (252)
T 3h7a_A          149 G---------S-GFAAFASAKFGLRAVAQSMAREL-MPKNIHVAHLIIDSGVDT  191 (252)
T ss_dssp             C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEC-----
T ss_pred             C---------C-CCccHHHHHHHHHHHHHHHHHHh-hhcCCEEEEEecCCccCC
Confidence            0         1 112265432        222222 3467999 8999998876

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.39  E-value=8.5e-13  Score=117.17  Aligned_cols=156  Identities=13%  Similarity=-0.032  Sum_probs=103.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      +|+||||||+|+||++++++|++     +|++|++++|+.....    ....++.++.+|++|.++++++++       .
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   77 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVE-----RGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGL   77 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999     8999999999753210    001257899999999988777665       4


Q ss_pred             CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        95 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      +|.++|.|+.....      .++.+..+++|+.|+.++++++... ..+-.+++.+||...+      ++.         
T Consensus        78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~------~~~---------  142 (235)
T 3l6e_A           78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQ------VGK---------  142 (235)
T ss_dssp             CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECC------SSC---------
T ss_pred             CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhc------CCC---------
Confidence            67899988753221      1145678899999999888887543 1111377777643211      110         


Q ss_pred             CCCCCCCCCCcchhHHHHH-----HHHH--hcCCCeeEEEEcCCceee
Q 015961          168 EDMPRLDAPNFYYTLEDIL-----FEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~~l-----~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                            + ....|+..|..     ..+.  ....|+++..++|+.|-.
T Consensus       143 ------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T  183 (235)
T 3l6e_A          143 ------A-NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRS  183 (235)
T ss_dssp             ------S-SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECC
T ss_pred             ------C-CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccC
Confidence                  1 11226543222     2211  135689999999998865

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.39  E-value=5.2e-13  Score=119.53  Aligned_cols=155  Identities=15%  Similarity=0.102  Sum_probs=104.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC--CCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN--ADHLVEYVQCDVSDPEETQAKLS-------QL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~--~~~~v~~~~~Dl~d~~~l~~~~~-------~~   95 (397)
                      |++|||||+|+||++++++|++     +|++|++++|+....  ..  ...++.++.+|++|++++.++++       .+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQ-----QGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5799999999999999999999     899999999975321  00  01367889999999999988876       45


Q ss_pred             CCeeEEEEeccc--C---C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWT--N---R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        96 ~~V~h~a~~~~~--~---~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      |.++|+|+....  .   .  ++.+..+++|+.|+.++++++...  ..+..+|+++||...+..               
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------------  140 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP---------------  140 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC---------------
Confidence            678888764311  1   1  145667899999999988887632  112467787775322210               


Q ss_pred             CCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceee
Q 015961          167 TEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                            .+ ....|+..|     +.....  ....|+++..++|+.|.|
T Consensus       141 ------~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g  182 (248)
T 3asu_A          141 ------YA-GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG  182 (248)
T ss_dssp             ------CT-TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred             ------CC-CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence                  01 112365432     222221  134589999999999985

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.38  E-value=8.3e-13  Score=119.25  Aligned_cols=158  Identities=16%  Similarity=0.058  Sum_probs=105.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .++|+||||||+|+||.+++++|++     .|++|++++|+....      . .....+.++.+|++|.+++.++++   
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   76 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGV-----AGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAV   76 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3568999999999999999999998     899999999975321      0 012457789999999988777664   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|+|+......      ++.+..+++|+.|+.++++++...  ..+..+|+++||...+.+          
T Consensus        77 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~----------  146 (264)
T 3tfo_A           77 DTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV----------  146 (264)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc----------
Confidence                5788888877532211      145667899999999888877543  112457777775332211          


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHH-----HHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 .+ ....|+..|.     ...+..+..|+++..++|+.|..
T Consensus       147 -----------~~-~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T  186 (264)
T 3tfo_A          147 -----------VP-TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVES  186 (264)
T ss_dssp             -----------CT-TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--
T ss_pred             -----------CC-CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcC
Confidence                       01 1123664332     22222122389999999998876

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.38  E-value=9.2e-13  Score=121.77  Aligned_cols=121  Identities=17%  Similarity=0.127  Sum_probs=86.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCH-HHHHHHHc-
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDP-EETQAKLS-   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~-~~l~~~~~-   93 (397)
                      ..+|+||||||+|+||.+++++|++     +|++|++++|+....        .....++.++.+|++|. +.+..+++ 
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~   84 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSS-----NGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADF   84 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHH
Confidence            3468999999999999999999998     899999999975321        01124688999999998 66555443 


Q ss_pred             ------cCCCeeEEEEecccC------------------------------------CCcHHHHHHhHHHHHHHHHHHHc
Q 015961           94 ------QLTDVTHIFYVTWTN------------------------------------RSTEAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~------------------------------------~~~~~~~~~~nv~gt~~ll~a~~  131 (397)
                            .+|.++|.|+.....                                    .+.....+++|+.|+.++++++.
T Consensus        85 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  164 (311)
T 3o26_A           85 IKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLI  164 (311)
T ss_dssp             HHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhh
Confidence                  678888987753210                                    01235568999999988888775


Q ss_pred             cc--CCCcceEEEecCCccc
Q 015961          132 PN--APNLRHVCLQTGTKHY  149 (397)
Q Consensus       132 ~~--~~~~~~~~~~s~~~~y  149 (397)
                      ..  ..+..+|+++||...+
T Consensus       165 ~~l~~~~~~~IV~isS~~~~  184 (311)
T 3o26_A          165 PLLQLSDSPRIVNVSSSTGS  184 (311)
T ss_dssp             HHHTTSSSCEEEEECCGGGS
T ss_pred             HhhccCCCCeEEEEecCCcc
Confidence            43  1234678888875544

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.38  E-value=1.7e-12  Score=118.80  Aligned_cols=157  Identities=14%  Similarity=0.057  Sum_probs=105.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc---EEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW---KVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~---~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      .+|+||||||+|+||.+++++|++     .|+   +|++++|+....         .....++.++.+|++|.+++++++
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~-----~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~  106 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLE-----ASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFI  106 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----HHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHH-----cCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            458999999999999999999998     676   999999975321         001246788999999999988887


Q ss_pred             cc-------CCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCcccccccccc
Q 015961           93 SQ-------LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        93 ~~-------~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                      +.       +|.++|.|+......       ++.+..+++|+.|+.++++++...  ..+..+|+++||...+.      
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~------  180 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD------  180 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC------
Confidence            64       566888876432111       145678899999999999988432  11245777776532221      


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceee
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                      +               .+ ....|+..|     +...+.  ....|+++..++|+.|..
T Consensus       181 ~---------------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T  223 (287)
T 3rku_A          181 A---------------YP-TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVET  223 (287)
T ss_dssp             C---------------CT-TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEES
T ss_pred             C---------------CC-CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcC
Confidence            1               01 112265432     222221  134689999999999987

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.37  E-value=8.2e-13  Score=129.47  Aligned_cols=156  Identities=19%  Similarity=0.160  Sum_probs=108.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCC---------CC-CCCCceEEEccCCCHHHHHHHH
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN---------WN-ADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~---------~~-~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ..+++||||||+|+||.+++++|.+     +|++ |++++|+....         .. ...++.++.+|++|.+++..++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~-----~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~  298 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLAR-----RGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELL  298 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHH-----HTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----cCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence            3568999999999999999999998     7885 99999975321         00 1235788999999999999988


Q ss_pred             ccC------CCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC
Q 015961           93 SQL------TDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        93 ~~~------~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                      +.+      |.|+|+|+.....    .  +.....+++|+.|+.++.++++..  .+.+|+++||...      .+|.. 
T Consensus       299 ~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~------~~g~~-  369 (486)
T 2fr1_A          299 GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFAS------AFGAP-  369 (486)
T ss_dssp             HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHH------HTCCT-
T ss_pred             HHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHh------cCCCC-
Confidence            876      5688887643221    1  134556789999999999999864  4678887775332      22210 


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHH---hcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDILFEEV---EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~---~~~~g~~~~ilRp~~v~G  208 (397)
                                   ....  |+..|...+.+   .+..|+++++++|+.+.+
T Consensus       370 -------------g~~~--Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~  405 (486)
T 2fr1_A          370 -------------GLGG--YAPGNAYLDGLAQQRRSDGLPATAVAWGTWAG  405 (486)
T ss_dssp             -------------TCTT--THHHHHHHHHHHHHHHHTTCCCEEEEECCBC-
T ss_pred             -------------CCHH--HHHHHHHHHHHHHHHHhcCCeEEEEECCeeCC
Confidence                         0012  55433332211   145689999999999887

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.35  E-value=4.7e-12  Score=124.63  Aligned_cols=157  Identities=15%  Similarity=0.083  Sum_probs=109.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC---------C-CCCCCceEEEccCCCHHHHHHHH
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ..+++||||||+|+||.+++++|.+     +|+ +|++++|+....         . ....++.++.+|++|.+++.+++
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~-----~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~  331 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAA-----EGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALV  331 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHH-----TTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHh-----CCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence            3568999999999999999999998     788 589999975321         0 01235788999999999999988


Q ss_pred             cc--CCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           93 SQ--LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        93 ~~--~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      +.  +|.|+|+|+.....    .  +.....+++|+.|+.++.+++... ..+.+|+++||...      .+|.      
T Consensus       332 ~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~------~~g~------  398 (511)
T 2z5l_A          332 TAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTG------TWGN------  398 (511)
T ss_dssp             HHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGG------TTCC------
T ss_pred             hcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHh------cCCC------
Confidence            76  78899998753321    1  134566789999999999998754 24677887775321      2331      


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHH---hcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTLEDILFEEV---EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~l~~~~---~~~~g~~~~ilRp~~v~G  208 (397)
                               + ....|+..|...+.+   .+..|+++++++|+.+.+
T Consensus       399 ---------~-g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~  435 (511)
T 2z5l_A          399 ---------A-GQGAYAAANAALDALAERRRAAGLPATSVAWGLWGG  435 (511)
T ss_dssp             ---------T-TBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCS
T ss_pred             ---------C-CCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccC
Confidence                     0 112366543333222   146789999999988743

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.35  E-value=9.3e-12  Score=113.08  Aligned_cols=116  Identities=14%  Similarity=0.106  Sum_probs=86.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------------ADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--------------~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+......              ...++.++.+|++|.+++.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAAR-----DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            468999999999999999999999     89999999998643110              02356789999999988776


Q ss_pred             HHc-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           91 KLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        91 ~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      +++       .+|.++|.|+......      +..+..+++|+.|+.++++++...  ..+..+++++||
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS  149 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAP  149 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECC
Confidence            664       5777888877532211      134567899999999999987553  122457777764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.35  E-value=7.5e-12  Score=111.78  Aligned_cols=117  Identities=11%  Similarity=0.070  Sum_probs=84.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccC--CCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDV--SDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl--~d~~~l~~~~~   93 (397)
                      ..+|+||||||+|+||++++++|++     +|++|++++|+....        .....++.++.+|+  +|.+++.++++
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAA-----HGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321        00124567788877  88877766554


Q ss_pred             -------cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 -------QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                             .+|.++|+|+......       ++....+++|+.|+.++++++...  ..+..+++++||
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS  154 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSS  154 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECC
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence                   5777888877532211       145667899999999999988432  123567887774

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.34  E-value=3e-12  Score=114.75  Aligned_cols=156  Identities=13%  Similarity=0.111  Sum_probs=103.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      ++|++|||||+|+||.+++++|++     .|++|++++|+....          .....++.++.+|++|.+++.++++ 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLAT-----DGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHH-----HTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            457999999999999999999998     899999999975321          0011467899999999988776665 


Q ss_pred             ------cCCCeeEEEEecccC--C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 ------QLTDVTHIFYVTWTN--R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~--~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                            .+|.++|.|+.....  .   ++.+..+++|+.|+.++++++...  ..+..+++.+||...+      ++.  
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~------~~~--  152 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK------YGF--  152 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhc------CCC--
Confidence                  466788877643211  1   134567899999999998887442  1124567777643211      110  


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                  .+  ...|+..|.        ++..+ ...|+++..++|+.|..
T Consensus       153 ------------~~--~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~T  193 (250)
T 3nyw_A          153 ------------AD--GGIYGSTKFALLGLAESLYREL-APLGIRVTTLCPGWVNT  193 (250)
T ss_dssp             ------------CC--TTHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBCS
T ss_pred             ------------CC--CcchHHHHHHHHHHHHHHHHHh-hhcCcEEEEEecCcccC
Confidence                        01  122654322        22222 34689999999998876

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.34  E-value=8.1e-12  Score=112.97  Aligned_cols=116  Identities=10%  Similarity=-0.025  Sum_probs=85.3

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      .+|+||||||+  |+||.+++++|++     .|++|++++|+....       .  ....++.++.+|++|.++++++++
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAE-----MGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHH-----TSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            46899999999  9999999999999     899999999875432       0  012467889999999988877665


Q ss_pred             -------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 -------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                             .+|.++|.|+......      ++....+++|+.++.++++++...  ..+..+++++||
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS  160 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITAS  160 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcc
Confidence                   3577888876533211      145667899999999999988432  112356777764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.34  E-value=2.6e-11  Score=113.73  Aligned_cols=116  Identities=13%  Similarity=0.065  Sum_probs=87.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------------ADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--------------~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      .+|+||||||+|.||.+++++|++     +|++|++++|+......              ...++.++.+|++|.+++.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~-----~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAK-----DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHH-----CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            468999999999999999999999     89999999998653210              12357789999999988877


Q ss_pred             HHc-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           91 KLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        91 ~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      +++       ++|.++|.|+......      +..+..+++|+.|+.++++++...  ..+..+|+++||
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS  188 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISP  188 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence            665       6788888877532211      134667899999999999988543  123467887775

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.34  E-value=2.9e-12  Score=116.10  Aligned_cols=115  Identities=10%  Similarity=0.034  Sum_probs=84.4

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|+||||||  +|+||.+++++|++     .|++|++++|+....     .....++.++.+|++|+++++++++    
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQE-----QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHH-----TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHH-----CCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHH
Confidence            4589999999  99999999999999     899999999975321     0012357889999999998877765    


Q ss_pred             ------cCCCeeEEEEeccc------C-C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961           94 ------QLTDVTHIFYVTWT------N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~------~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                            .+|.++|+|+....      . .    ++.+..+++|+.++.++++++...-.+-.+|+++|
T Consensus        81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  148 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  148 (269)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence                  56778888764321      1 0    13456789999999999999876411124666665

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.33  E-value=2.3e-12  Score=120.07  Aligned_cols=156  Identities=17%  Similarity=0.098  Sum_probs=105.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-----------CCCCCceEEEccCCCHHHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----------NADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-----------~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      +|+||||||+|+||.+++++|++     +|++|+++.|.....  .           ....++.++.+|++|.+++.+++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~-----~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   76 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLAS-----DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAAR   76 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHT-----CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999     899988887753221  0           01146789999999999999888


Q ss_pred             cc-----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961           93 SQ-----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        93 ~~-----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                      +.     +|.++|.|+.....      .++.+..+++|+.|+.++++++...  ..+..+|+++||...+.      +  
T Consensus        77 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~------~--  148 (327)
T 1jtv_A           77 ERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM------G--  148 (327)
T ss_dssp             HTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS------C--
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc------C--
Confidence            76     66788887643211      1145677899999999999986432  11256777777533221      1  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHH-----HHHH--hcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDIL-----FEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l-----~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                          .         + ....|+..|..     ..+.  ....|+++++++|+.|..
T Consensus       149 ----~---------~-~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T  190 (327)
T 1jtv_A          149 ----L---------P-FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT  190 (327)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             ----C---------C-CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccC
Confidence                0         1 11236543322     2221  134689999999999886

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.30  E-value=4.6e-12  Score=115.49  Aligned_cols=156  Identities=16%  Similarity=0.098  Sum_probs=103.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|++|||||+|+||.+++++|++     .|++|++++|+....      .  .....+.++.+|++|.+++.++++   
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  106 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSA-----EGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR  106 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0  001235889999999988777665   


Q ss_pred             ----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccccccccccCC
Q 015961           94 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                          .+|.++|+|+......       ++.+..+++|+.|+.++++++...    +..-.+|+++||...+.      + 
T Consensus       107 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------~-  179 (281)
T 4dry_A          107 AEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT------P-  179 (281)
T ss_dssp             HHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC------C-
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC------C-
Confidence                4677888877532211       145668899999988888776543    11235777776532211      0 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                   . + ....|+..|        .++... ...|+++..++|+.|..
T Consensus       180 -------------~-~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  221 (281)
T 4dry_A          180 -------------R-P-NSAPYTATKHAITGLTKSTALDG-RMHDIACGQIDIGNAAT  221 (281)
T ss_dssp             -------------C-T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEECBCC
T ss_pred             -------------C-C-CChhHHHHHHHHHHHHHHHHHHh-cccCeEEEEEEECcCcC
Confidence                         0 1 112265432        222222 45689999999998876

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.30  E-value=4e-12  Score=114.61  Aligned_cols=156  Identities=13%  Similarity=0.045  Sum_probs=101.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ++|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|++++..+++    
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCK-----AGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR   78 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 001357789999999988766554    


Q ss_pred             ----cCCCeeEEEE--ec------cc-----CCCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCcccccccc
Q 015961           94 ----QLTDVTHIFY--VT------WT-----NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFE  154 (397)
Q Consensus        94 ----~~~~V~h~a~--~~------~~-----~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~  154 (397)
                          .+|.++|.|+  ..      ..     ..+..+..+++|+.++.++.+++...  ..+..+++++||...+.    
T Consensus        79 ~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  154 (260)
T 2qq5_A           79 EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ----  154 (260)
T ss_dssp             HHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS----
T ss_pred             hcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC----
Confidence                3577888873  11      00     11235567889999987776655432  11246777777532221    


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCcchhHHHHH-----HHHH--hcCCCeeEEEEcCCceee
Q 015961          155 AFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL-----FEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       155 ~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l-----~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                              .         .+  ...|+..|..     ..+.  ....|+++.+++|+.|..
T Consensus       155 --------~---------~~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T  196 (260)
T 2qq5_A          155 --------Y---------MF--NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQT  196 (260)
T ss_dssp             --------C---------CS--SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCT
T ss_pred             --------C---------CC--CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCcccc
Confidence                    0         01  1236643322     2211  135689999999999877

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.30  E-value=4.5e-12  Score=116.24  Aligned_cols=209  Identities=15%  Similarity=0.094  Sum_probs=128.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCC------C--CCCCCceEEEccCCCHH---------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W--NADHLVEYVQCDVSDPE---------   86 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~------~--~~~~~v~~~~~Dl~d~~---------   86 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++ |+....      .  ....++.++.+|++|.+         
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHA-----EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            457999999999999999999999     899999999 764211      0  01246889999999988         


Q ss_pred             --------HHHHHHc-------cCCCeeEEEEecccC--------------------CCcHHHHHHhHHHHHHHHHHHHc
Q 015961           87 --------ETQAKLS-------QLTDVTHIFYVTWTN--------------------RSTEAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        87 --------~l~~~~~-------~~~~V~h~a~~~~~~--------------------~~~~~~~~~~nv~gt~~ll~a~~  131 (397)
                              ++.++++       .+|.++|+|+.....                    .+..+..+++|+.++.++++++.
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                    7777665       578888887753211                    11234567999999999998876


Q ss_pred             cc--CCC------cceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCC
Q 015961          132 PN--APN------LRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEE  195 (397)
Q Consensus       132 ~~--~~~------~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g  195 (397)
                      ..  ..+      ..+|+++||...+..                     .+ ....|+..|.        ++..+ ...|
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~---------------------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~g  219 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQP---------------------LL-GYTIYTMAKGALEGLTRSAALEL-APLQ  219 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSC---------------------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGT
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCC---------------------CC-CCchhHHHHHHHHHHHHHHHHHH-HhcC
Confidence            43  112      467887775332210                     01 1123654322        22222 3568


Q ss_pred             eeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCc
Q 015961          196 LSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEA  273 (397)
Q Consensus       196 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~  273 (397)
                      +++..++|+.|..+-  . ..  ...  ...+.+  ..|+   +.        ......++|..+++++...  ...|++
T Consensus       220 I~vn~v~PG~v~T~~--~-~~--~~~--~~~~~~--~~p~---~~--------r~~~pedvA~~v~~l~s~~~~~itG~~  279 (291)
T 1e7w_A          220 IRVNGVGPGLSVLVD--D-MP--PAV--WEGHRS--KVPL---YQ--------RDSSAAEVSDVVIFLCSSKAKYITGTC  279 (291)
T ss_dssp             EEEEEEEESSBCCGG--G-SC--HHH--HHHHHT--TCTT---TT--------SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             eEEEEEeeCCccCCc--c-CC--HHH--HHHHHh--hCCC---CC--------CCCCHHHHHHHHHHHhCCcccCccCcE
Confidence            999999999987632  1 10  111  000111  1121   10        1123455678887777532  345788


Q ss_pred             eeccCCCe
Q 015961          274 FNCNNGDV  281 (397)
Q Consensus       274 yni~~~~~  281 (397)
                      +++.+|..
T Consensus       280 i~vdGG~~  287 (291)
T 1e7w_A          280 VKVDGGYS  287 (291)
T ss_dssp             EEESTTGG
T ss_pred             EEECCCcc
Confidence            88877643

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.30  E-value=4.5e-12  Score=113.87  Aligned_cols=208  Identities=13%  Similarity=-0.009  Sum_probs=119.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC------CCCCceEEEccCCCHHHHH----HHHccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQ----AKLSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~l~----~~~~~~~   96 (397)
                      |+||||||+|+||++++++|++     +|++|++++|+......      ....+..+  |..+.+.+.    +.+..+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSE-----AGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHH-----TTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999     89999999997543100      01122222  555544332    2334688


Q ss_pred             CeeEEEEec-ccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           97 DVTHIFYVT-WTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        97 ~V~h~a~~~-~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      .++|+|+.. ...  .    ++.+..+++|+.++.++++++...  ..+..+++++||...+.      +      .   
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------~---  139 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG------P------W---  139 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS------C------C---
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc------C------C---
Confidence            899998754 111  0    134667899999999998887542  11245777777532221      0      0   


Q ss_pred             CCCCCCCCCCcchhHHHHH--------HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHH----HHHH-HhhhcCCC
Q 015961          168 EDMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALC----VYAA-VCKHEGIP  234 (397)
Q Consensus       168 E~~p~~~~~~~~y~~e~~l--------~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~----~~~~-i~~~~~~~  234 (397)
                            + ....|+..|..        +... ...|+++.+++|+.|+|+.......  ..+.    .... +..  ..|
T Consensus       140 ------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~~~~~~~~~~--T~~~~~~~~~~~~~~~--~~p  207 (254)
T 1zmt_A          140 ------K-ELSTYTSARAGACTLANALSKEL-GEYNIPVFAIGPNYLHSEDSPYFYP--TEPWKTNPEHVAHVKK--VTA  207 (254)
T ss_dssp             ------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCCEEEEEESSBCCBTCCSSCB--HHHHTTCHHHHHHHHH--HSS
T ss_pred             ------C-CchHHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEecCccccccccccCC--CcccccChHHHHHHhc--cCC
Confidence                  1 11235543222        2222 3458999999999998843222111  1110    0000 011  111


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961          235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  280 (397)
Q Consensus       235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~  280 (397)
                      +            ....+..++|..+++++..+.  ..|+++++.+|.
T Consensus       208 ~------------~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          208 L------------QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             S------------SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             C------------CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            0            012345566888887775433  357888887764

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.29  E-value=1.2e-10  Score=102.61  Aligned_cols=157  Identities=14%  Similarity=0.042  Sum_probs=107.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHcc---CCCee
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQ---LTDVT   99 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V~   99 (397)
                      ..+|++|||||++-||..+++.|.+     .|++|++.+|+..... ....++..+.+|++|+++++++++.   +|.++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~-----~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAE-----LGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            3589999999999999999999999     8999999999865421 2335788999999999988887765   45555


Q ss_pred             EEEEecccCCC----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTNRS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus       100 h~a~~~~~~~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      |.|+......+    +.+..+++|+.|+-.+.+++... ..+--+|+.+||...+      .|      .         +
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~------~~------~---------~  142 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYST------FG------S---------A  142 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGT------SC------C---------S
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecccc------CC------C---------C
Confidence            55543221111    45667899999998888777554 1112466666642211      11      0         1


Q ss_pred             CCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          175 APNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       175 ~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      . ...|+.        .+.++..+ ...|+++-.+-|+.|--
T Consensus       143 ~-~~~Y~asKaav~~ltr~lA~El-a~~gIrVNaV~PG~i~T  182 (242)
T 4b79_A          143 D-RPAYSASKGAIVQLTRSLACEY-AAERIRVNAIAPGWIDT  182 (242)
T ss_dssp             S-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             C-CHHHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEeCCCCC
Confidence            1 112553        45555444 56789999999998865

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.28  E-value=8.6e-12  Score=121.11  Aligned_cols=156  Identities=12%  Similarity=0.045  Sum_probs=107.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .++++|||||+|.||.+++++|.+     +|++|++++|+....    .....++.++.+|++|.+++..+++       
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~-----~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFAR-----DGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHH-----CCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999998     899999999864221    0011256789999999988776664       


Q ss_pred             c-CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 Q-LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 ~-~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      + +|.|+|.|+......      +..+..+++|+.|+.++.+++....  ....+|+++||...+      .|.      
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~------~g~------  354 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI------AGN------  354 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHH------HCC------
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhC------CCC------
Confidence            2 777888876532211      1345678999999999999887641  245688877754322      121      


Q ss_pred             CCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                               + ....|+..|.        ++... ...|+++..+.|+.|..
T Consensus       355 ---------~-g~~~YaasKaal~~l~~~la~e~-~~~gI~vn~v~PG~v~T  395 (454)
T 3u0b_A          355 ---------R-GQTNYATTKAGMIGLAEALAPVL-ADKGITINAVAPGFIET  395 (454)
T ss_dssp             ---------T-TCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEEEEECSBCC
T ss_pred             ---------C-CCHHHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEEcCcccC
Confidence                     0 1122664333        22222 45689999999999876

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.27  E-value=3.3e-12  Score=114.05  Aligned_cols=156  Identities=17%  Similarity=0.133  Sum_probs=90.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHH---HHHH---ccCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEET---QAKL---SQLT   96 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l---~~~~---~~~~   96 (397)
                      ++|+||||||+|+||++++++|++      |+.|++++|++...  .....++.++.+|+++.+..   .+.+   ..+|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~------g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR------DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT------TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC------CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            357899999999999999999975      67899999975321  01124688999999887542   1112   2467


Q ss_pred             CeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        97 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      .++|+|+......      +.....+++|+.++.++++++...- ..-.+++++||...+..            .     
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------------~-----  140 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGP------------H-----  140 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-------------------------
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccC------------C-----
Confidence            7888877543211      1345678999999888888765420 00146776664332211            0     


Q ss_pred             CCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceee
Q 015961          170 MPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       170 ~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G  208 (397)
                          + ....|+..|.     ...+.  ....|+++.+++|+.|.+
T Consensus       141 ----~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  181 (245)
T 3e9n_A          141 ----P-GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNT  181 (245)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--
T ss_pred             ----C-CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccC
Confidence                1 1123654332     22221  134689999999999988

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.27  E-value=5.3e-11  Score=105.66  Aligned_cols=204  Identities=11%  Similarity=0.043  Sum_probs=124.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      |.|+||||||++-||.++++.|++     .|++|++.+|+....   .....++..+++|++|+++++++++       .
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~-----~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLE-----AGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            779999999999999999999999     899999999975321   1123578899999999987766543       4


Q ss_pred             CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        95 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      +|.++|.|+.....      .++.+..+++|+.|+-.+.+++... .++--+++.+||...+.      +          
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~------~----------  139 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ------S----------  139 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS------C----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc------C----------
Confidence            66677766542211      1145677899999998888777553 11114566665422110      0          


Q ss_pred             CCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 015961          168 EDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG  239 (397)
Q Consensus       168 E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g  239 (397)
                           .|. ...|+.        .+.++..+ . .++++..+-|+.|--  +... .+....      .+  ..|+.   
T Consensus       140 -----~~~-~~~Y~asKaal~~ltk~lA~el-a-~~IrVN~I~PG~i~t--~~~~-~~~~~~------~~--~~Pl~---  197 (247)
T 3ged_A          140 -----EPD-SEAYASAKGGIVALTHALAMSL-G-PDVLVNCIAPGWINV--TEQQ-EFTQED------CA--AIPAG---  197 (247)
T ss_dssp             -----CTT-CHHHHHHHHHHHHHHHHHHHHH-T-TTSEEEEEEECSBCC--CC----CCHHH------HH--TSTTS---
T ss_pred             -----CCC-CHHHHHHHHHHHHHHHHHHHHH-C-CCCEEEEEecCcCCC--CCcH-HHHHHH------Hh--cCCCC---
Confidence                 011 122553        44554444 3 379999999998854  2111 111111      11  22211   


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCC
Q 015961          240 TKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD  280 (397)
Q Consensus       240 ~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~  280 (397)
                               -+....++|.++++++...-.-|+++.+.+|-
T Consensus       198 ---------R~g~pediA~~v~fL~s~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          198 ---------KVGTPKDISNMVLFLCQQDFITGETIIVDGGM  229 (247)
T ss_dssp             ---------SCBCHHHHHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred             ---------CCcCHHHHHHHHHHHHhCCCCCCCeEEECcCH
Confidence                     12234556777777776555568888887664

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.25  E-value=2e-11  Score=119.37  Aligned_cols=157  Identities=18%  Similarity=0.136  Sum_probs=108.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC----------CCCCCceEEEccCCCHHHHHHH
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW----------NADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~----------~~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      +.|++++|||||+|.||.+++++|.+     +|+ +|+++.|+.....          ....++.++.+|++|.+++.++
T Consensus       236 ~~~~~~vLITGgsgGIG~alA~~La~-----~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~  310 (496)
T 3mje_A          236 PPVHGSVLVTGGTGGIGGRVARRLAE-----QGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAAL  310 (496)
T ss_dssp             CCCCSEEEEETCSSHHHHHHHHHHHH-----TTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCchHHHHHHHHHH-----CCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            44668999999999999999999998     788 6888888642210          0123678999999999999988


Q ss_pred             Hcc------CCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCC
Q 015961           92 LSQ------LTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        92 ~~~------~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                      ++.      +|.|+|.|+.....   .+    .....+++|+.|+.++.+++...  ...+|+++||...      .+|.
T Consensus       311 ~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~--~~~~iV~~SS~a~------~~g~  382 (496)
T 3mje_A          311 LAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL--DLDAFVLFSSGAA------VWGS  382 (496)
T ss_dssp             HHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS--CCSEEEEEEEHHH------HTTC
T ss_pred             HHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEEEeChHh------cCCC
Confidence            875      34577776643111   11    34567899999999999999875  3567777765322      2221


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhHHHHHHHHH---hcCCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTLEDILFEEV---EKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~---~~~~g~~~~ilRp~~v~G  208 (397)
                                     + ....|+..|...+.+   .+..|++++.+.|+.+.+
T Consensus       383 ---------------~-g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~  419 (496)
T 3mje_A          383 ---------------G-GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGE  419 (496)
T ss_dssp             ---------------T-TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESS
T ss_pred             ---------------C-CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccC
Confidence                           1 112266433332221   146789999999998876

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.24  E-value=3.2e-11  Score=108.58  Aligned_cols=120  Identities=14%  Similarity=0.002  Sum_probs=84.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|++|||||+|+||.+++++|++...  .|++|++++|+....      .   ....++.++.+|++|++++.++++  
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLS--PGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBC--TTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhc--CCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            357899999999999999999986100  389999999975321      0   002357889999999988776653  


Q ss_pred             -------cCC--CeeEEEEecccC-------C--CcHHHHHHhHHHHHHHHHHHHcccC-C---CcceEEEecCC
Q 015961           94 -------QLT--DVTHIFYVTWTN-------R--STEAENCKINGSMFRNVLRAVIPNA-P---NLRHVCLQTGT  146 (397)
Q Consensus        94 -------~~~--~V~h~a~~~~~~-------~--~~~~~~~~~nv~gt~~ll~a~~~~~-~---~~~~~~~~s~~  146 (397)
                             .+|  .++|+|+.....       .  ++.+..+++|+.|+.++++++...- .   ...+|+++||.
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSL  157 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCG
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCc
Confidence                   246  678887643210       1  2456678999999999999886542 1   24568877754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.21  E-value=1.2e-10  Score=104.50  Aligned_cols=154  Identities=16%  Similarity=0.075  Sum_probs=102.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   97 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~   97 (397)
                      .+|++|||||++-||.++++.|.+     .|++|++.+|+.....   .....+++|++|+++++.+++       .+|.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLE-----LGAQVLTTARARPEGL---PEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHH-----TTCEEEEEESSCCTTS---CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHH-----cCCEEEEEECCchhCC---CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999     8999999999765432   344578999999987665543       3566


Q ss_pred             eeEEEEecccC----C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           98 VTHIFYVTWTN----R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        98 V~h~a~~~~~~----~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      ++|.|+.....    .    ++.+..+++|+.++.++.+++...  ..+-.+++.+||...+      .+          
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~------~~----------  145 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRV------LP----------  145 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT------SC----------
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhc------cC----------
Confidence            77766532211    1    134667899999998887776543  1123466666542211      00          


Q ss_pred             CCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          168 EDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       168 E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                           .|....+|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       146 -----~~~~~~~Y~asKaal~~lt~~lA~El-a~~gIrVN~V~PG~i~T  188 (261)
T 4h15_A          146 -----LPESTTAYAAAKAALSTYSKAMSKEV-SPKGVRVVRVSPGWIET  188 (261)
T ss_dssp             -----CTTTCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHHHh-hhhCeEEEEEeCCCcCC
Confidence                 0111234653        34444443 46789999999988865

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.20  E-value=3.6e-11  Score=109.57  Aligned_cols=116  Identities=13%  Similarity=0.073  Sum_probs=83.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....    .....++.++.+|++|.+++.++++       
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVA-----EGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            358999999999999999999999     899999999975321    0012468899999999987766654       


Q ss_pred             cCCCeeEEEEecccCC-------C----cHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961           94 QLTDVTHIFYVTWTNR-------S----TEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  145 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~-------~----~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  145 (397)
                      .+|.++|.|+......       +    ..+..+++|+.++.++++++.... .+-.+++++||
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS  142 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTIS  142 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEec
Confidence            4677888876432111       1    235577899999999999886531 11146676664

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.15  E-value=2e-10  Score=113.44  Aligned_cols=156  Identities=12%  Similarity=0.071  Sum_probs=105.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEE-eCCCCC-----------C-C------C--CCCCceEEEcc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGV-ARRPKP-----------N-W------N--ADHLVEYVQCD   81 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l-~R~~~~-----------~-~------~--~~~~v~~~~~D   81 (397)
                      ..++++|||||+|.||.+++++|.+     +|++ |+++ +|+...           . .      .  ...++.++.+|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~-----~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~D  323 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLAR-----DGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCD  323 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHH-----HTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECC
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHH-----cCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECC
Confidence            3568999999999999999999998     7887 6665 776422           0 0      0  01357899999


Q ss_pred             CCCHHHHHHHHccC------CCeeEEEEecccC---C-C--cHHHHHHhHHHHHHHHHHHHcccCCC---cceEEEecCC
Q 015961           82 VSDPEETQAKLSQL------TDVTHIFYVTWTN---R-S--TEAENCKINGSMFRNVLRAVIPNAPN---LRHVCLQTGT  146 (397)
Q Consensus        82 l~d~~~l~~~~~~~------~~V~h~a~~~~~~---~-~--~~~~~~~~nv~gt~~ll~a~~~~~~~---~~~~~~~s~~  146 (397)
                      ++|.+++..++..+      |.|+|+|+.....   . +  .....+++|+.|+.++.+++......   ..+|+++||.
T Consensus       324 vtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~  403 (525)
T 3qp9_A          324 LTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSV  403 (525)
T ss_dssp             TTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEG
T ss_pred             CCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCH
Confidence            99999999988764      4578877643211   1 1  34667899999999999998765211   6778877653


Q ss_pred             ccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHh---cCCCeeEEEEcCCce
Q 015961          147 KHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE---KKEELSWSVHRPDTI  206 (397)
Q Consensus       147 ~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~~---~~~g~~~~ilRp~~v  206 (397)
                      ..      .+|.               + ....|+..|...+.+.   +..|++++.+.|+.+
T Consensus       404 a~------~~g~---------------~-g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~  444 (525)
T 3qp9_A          404 AA------IWGG---------------A-GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW  444 (525)
T ss_dssp             GG------TTCC---------------T-TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred             HH------cCCC---------------C-CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence            22      2221               1 1223776555444332   456799999999988

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.08  E-value=3.1e-10  Score=101.16  Aligned_cols=158  Identities=15%  Similarity=0.050  Sum_probs=106.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      +..+|.+|||||++-||..+++.|.+     +|.+|++.+|+....      . ....++..+++|++|+++++++++  
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~-----~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~   78 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFAL-----NDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRT   78 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            34578999999999999999999998     899999999975321      0 012467889999999987766553  


Q ss_pred             -----cCCCeeEEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           .+|.++|.|+......   +    +.+..+++|+.|+-++.+++...  ..+--+|+.+||...+      .+  
T Consensus        79 ~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~------~~--  150 (254)
T 4fn4_A           79 FETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI------RG--  150 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT------CS--
T ss_pred             HHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc------CC--
Confidence                 4677777766432111   1    45678899999998888777553  1123567766642211      11  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                          .         |. ...|+.        .+.++..+ ..+|+++..+-|+.|--
T Consensus       151 ----~---------~~-~~~Y~asKaal~~ltr~lA~el-a~~gIrVN~V~PG~i~T  192 (254)
T 4fn4_A          151 ----G---------FA-GAPYTVAKHGLIGLTRSIAAHY-GDQGIRAVAVLPGTVKT  192 (254)
T ss_dssp             ----S---------SS-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             ----C---------CC-ChHHHHHHHHHHHHHHHHHHHh-hhhCeEEEEEEeCCCCC
Confidence                0         11 112542        45555544 56789999999998865

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.08  E-value=7.1e-12  Score=111.83  Aligned_cols=153  Identities=13%  Similarity=0.074  Sum_probs=92.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-e--CCCCCCC--C-CCCCceEEEccCCCHHHH-HHHHc---cC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-A--RRPKPNW--N-ADHLVEYVQCDVSDPEET-QAKLS---QL   95 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~--R~~~~~~--~-~~~~v~~~~~Dl~d~~~l-~~~~~---~~   95 (397)
                      +|+||||||+|+||.+++++|++     +|++|+++ +  |++....  . ...+.++.  |..+.+.+ +...+   .+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQ-----DGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHH-----TTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCC
Confidence            37899999999999999999999     89999999 6  8643210  0 00122222  44444333 22222   45


Q ss_pred             CCeeEEEEeccc---CC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           96 TDVTHIFYVTWT---NR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        96 ~~V~h~a~~~~~---~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      |.++|+|+....   ..      ++.+..+++|+.++.++++++...  ..+..+|+++||...+..            .
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~  141 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP------------L  141 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC------------C
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC------------C
Confidence            668887764322   11      134667899999999998887542  112467887775332211            0


Q ss_pred             CCCCCCCCCCCCCcchhHHHH-----H---HHHHhcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                            +  .  ...|+..|.     .   +... ...|+++..++|+.|-.
T Consensus       142 ------~--~--~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~T  182 (244)
T 1zmo_A          142 ------A--Y--NPLYGPARAATVALVESAAKTL-SRDGILLYAIGPNFFNN  182 (244)
T ss_dssp             ------T--T--CTTHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBCB
T ss_pred             ------C--C--chHHHHHHHHHHHHHHHHHHHH-hhcCcEEEEEeeCCCcC
Confidence                  0  1  112554322     2   2222 34689999999998876

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.07  E-value=2.8e-09  Score=95.61  Aligned_cols=158  Identities=13%  Similarity=0.049  Sum_probs=102.7

Q ss_pred             CCCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ..+|++|||||+|  -||..+++.|.+     .|++|++.+|+....        .....++.++++|++|++++.++++
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   78 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQ-----LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFE   78 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHH
Confidence            3568999999987  799999999999     899999999975321        1122467899999999987766553


Q ss_pred             -------cCCCeeEEEEecccC------CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccccccccc
Q 015961           94 -------QLTDVTHIFYVTWTN------RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~------~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                             .+|.++|.|+.....      .+    +....+++|+.++..+..++....++--+|+.+||....      .
T Consensus        79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~------~  152 (256)
T 4fs3_A           79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE------F  152 (256)
T ss_dssp             HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT------S
T ss_pred             HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc------c
Confidence                   467677776643211      01    123446788888888777776543333567766642211      1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeec
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF  209 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~  209 (397)
                      +               .|. ...|+.        .+.++..+ ..+|+++..+.|+.|--+
T Consensus       153 ~---------------~~~-~~~Y~asKaal~~ltr~lA~El-a~~gIrVN~V~PG~i~T~  196 (256)
T 4fs3_A          153 A---------------VQN-YNVMGVAKASLEANVKYLALDL-GPDNIRVNAISAGPIRTL  196 (256)
T ss_dssp             C---------------CTT-THHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCCCSG
T ss_pred             C---------------ccc-chhhHHHHHHHHHHHHHHHHHh-CccCeEEEEEecCCCCCh
Confidence            1               011 122543        34444443 467899999999988663

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.04  E-value=5.8e-10  Score=103.39  Aligned_cols=154  Identities=12%  Similarity=0.017  Sum_probs=96.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C---------CCCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W---------NADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~---------~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      .+|+||||||+|+||.+++++|++     +|++|++++|.....     .         ....+ ....+|+.|.+++..
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~-----~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-~~~~~D~~~~~~~~~   81 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAE-----RGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-GKAVANYDSVEAGEK   81 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-CEEEEECCCGGGHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-CeEEEeCCCHHHHHH
Confidence            458999999999999999999999     899999987642100     0         00001 134689999876544


Q ss_pred             HH-------ccCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccc
Q 015961           91 KL-------SQLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEA  155 (397)
Q Consensus        91 ~~-------~~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~  155 (397)
                      ++       ..+|.++|.|+.....      .+..+..+++|+.|+.++++++...  ..+..+|+++||...      .
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~------~  155 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG------I  155 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH------H
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh------c
Confidence            43       3577788887753321      1145667899999999888877432  112467887775322      2


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcchhHHHHH-----HHHH--hcCCCeeEEEEcCCce
Q 015961          156 FGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL-----FEEV--EKKEELSWSVHRPDTI  206 (397)
Q Consensus       156 ~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l-----~~~~--~~~~g~~~~ilRp~~v  206 (397)
                      ++.               + ....|+..|..     ..+.  ....|+++.+++|+.+
T Consensus       156 ~~~---------------~-~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          156 YGN---------------F-GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             HCC---------------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             cCC---------------C-CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence            221               0 11236643332     2211  1346899999999876

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.03  E-value=1.3e-09  Score=99.93  Aligned_cols=213  Identities=10%  Similarity=-0.024  Sum_probs=115.2

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCC-----------CC--CC--CCCCC----ceEEEcc--
Q 015961           25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRP-----------KP--NW--NADHL----VEYVQCD--   81 (397)
Q Consensus        25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-----------~~--~~--~~~~~----v~~~~~D--   81 (397)
                      .+|++|||||+  |+||.+++++|++     .|++|++++|++           ..  ..  .....    ...+.+|  
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAA-----AGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEeeccccchhhhhhhhhhHhhhhhhhcccccccccccccccee
Confidence            35789999999  9999999999999     899999987531           11  00  00001    2333443  


Q ss_pred             ------CC----C--------HHHHHHH-------HccCCCeeEEEEecc---cC-C----CcHHHHHHhHHHHHHHHHH
Q 015961           82 ------VS----D--------PEETQAK-------LSQLTDVTHIFYVTW---TN-R----STEAENCKINGSMFRNVLR  128 (397)
Q Consensus        82 ------l~----d--------~~~l~~~-------~~~~~~V~h~a~~~~---~~-~----~~~~~~~~~nv~gt~~ll~  128 (397)
                            +.    |        .++++.+       +..+|.++|.|+...   .. .    ++.+..+++|+.|+.++++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  22    1        2223332       235677888875321   11 1    1456678999999999999


Q ss_pred             HHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH-----HHHHHh--c-CCCeeEEE
Q 015961          129 AVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--K-KEELSWSV  200 (397)
Q Consensus       129 a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~-~~g~~~~i  200 (397)
                      ++...-.+-.+++++||...+      .+      .         +.....|+..|.     ...+..  . ..|+++..
T Consensus       162 ~~~~~m~~~g~iv~isS~~~~------~~------~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~  220 (297)
T 1d7o_A          162 HFLPIMNPGGASISLTYIASE------RI------I---------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNT  220 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGT------SC------C---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred             HHHHHhccCceEEEEeccccc------cC------C---------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEE
Confidence            987641112467766643221      11      0         111012654322     222211  2 25899999


Q ss_pred             EcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccC
Q 015961          201 HRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNN  278 (397)
Q Consensus       201 lRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~  278 (397)
                      ++|+.|.++-... ......+..  .+.+  ..|+   +         ...+..++|..+++++...  ...|+++++.+
T Consensus       221 v~PG~v~T~~~~~-~~~~~~~~~--~~~~--~~p~---~---------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdg  283 (297)
T 1d7o_A          221 ISAGPLGSRAAKA-IGFIDTMIE--YSYN--NAPI---Q---------KTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             EEECCCBCCCSSC-CSHHHHHHH--HHHH--HSSS---C---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             Eeccccccchhhh-ccccHHHHH--Hhhc--cCCC---C---------CCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            9999999842111 111111100  0111  1121   0         1124455678877776532  23578899887


Q ss_pred             CC
Q 015961          279 GD  280 (397)
Q Consensus       279 ~~  280 (397)
                      |.
T Consensus       284 G~  285 (297)
T 1d7o_A          284 GL  285 (297)
T ss_dssp             TG
T ss_pred             Cc
Confidence            64

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.02  E-value=4.3e-10  Score=100.25  Aligned_cols=157  Identities=15%  Similarity=-0.003  Sum_probs=104.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      ..+|.+|||||++-||..+++.|.+     .|++|++.+|+....      . ....++..+.+|++|+++++++++.  
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~-----~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   81 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAA-----AGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLD   81 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999     899999999975321      0 0124677899999999887665543  


Q ss_pred             -----CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCC
Q 015961           95 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        95 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           +|.++|.|+......      ++.+..+++|+.|+-.+.+++...   ..+-.+|+.+||...+.      +   
T Consensus        82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~------~---  152 (255)
T 4g81_D           82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA------A---  152 (255)
T ss_dssp             HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------B---
T ss_pred             HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC------C---
Confidence                 555666665422111      145677899999998888766442   11235677666432111      0   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                  .|. ...|+.        .+.++..+ ..+|+++-.+-|+.|.-
T Consensus       153 ------------~~~-~~~Y~asKaal~~ltr~lA~el-a~~gIrVN~V~PG~i~T  194 (255)
T 4g81_D          153 ------------RPT-VAPYTAAKGGIKMLTCSMAAEW-AQFNIQTNAIGPGYILT  194 (255)
T ss_dssp             ------------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ------------CCC-chhHHHHHHHHHHHHHHHHHHh-cccCeEEEEEeeCCCCC
Confidence                        011 122542        45555444 56789999999998875

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.01  E-value=2.8e-09  Score=95.94  Aligned_cols=157  Identities=14%  Similarity=0.018  Sum_probs=103.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHcc-----
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLSQ-----   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~~-----   94 (397)
                      ..+|.+|||||++-||..+++.|++     +|++|++.+|+.....    ....++..+++|++|+++++++++.     
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~-----~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~  101 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVA-----EGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA  101 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999     8999999999753210    0124567899999999887666543     


Q ss_pred             --CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           95 --LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        95 --~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                        +|.+++.|+.....  .    ++.+..+++|+.|+-.+.+++...-.+-..++.+||...+      .+         
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~------~~---------  166 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS------TG---------  166 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG------SC---------
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc------cC---------
Confidence              45555655432211  1    1457788999999999999887652223355555532211      11         


Q ss_pred             CCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          167 TEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                            .|. ...|+.        .+.++..+ ...|+++-.+-|+.|--
T Consensus       167 ------~~~-~~~Y~asKaav~~ltr~lA~El-a~~gIrVN~V~PG~i~T  208 (273)
T 4fgs_A          167 ------TPA-FSVYAASKAALRSFARNWILDL-KDRGIRINTLSPGPTET  208 (273)
T ss_dssp             ------CTT-CHHHHHHHHHHHHHHHHHHHHT-TTSCEEEEEEEECSBCC
T ss_pred             ------CCC-chHHHHHHHHHHHHHHHHHHHh-cccCeEEEEEeeCCCCC
Confidence                  011 112553        34444443 56789999999998865

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.99  E-value=1.4e-09  Score=97.29  Aligned_cols=156  Identities=10%  Similarity=0.073  Sum_probs=104.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      .+|.+|||||++-||..+++.|.+     +|.+|++.+|+.....      ....++.++.+|++|+++++++++     
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~-----~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAE-----ERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999     8999999999765320      012467899999999987665543     


Q ss_pred             --cCCCeeEEEEecccC-C----CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTN-R----STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                        .+|.++|.|+..... .    ++.+..+++|+.++..+.+++...- .+--+++.+||...+.      +.       
T Consensus        81 ~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~------~~-------  147 (258)
T 4gkb_A           81 FGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT------GQ-------  147 (258)
T ss_dssp             HSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH------CC-------
T ss_pred             hCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc------CC-------
Confidence              467677776642211 1    1456678999999988888775430 0114567666433221      10       


Q ss_pred             CCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          166 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                              |. ...|+.        .+.++..+ ..+|+++-.+-|+.|--
T Consensus       148 --------~~-~~~Y~asKaav~~ltr~lA~el-a~~gIrVN~V~PG~i~T  188 (258)
T 4gkb_A          148 --------GN-TSGYCASKGAQLALTREWAVAL-REHGVRVNAVIPAEVMT  188 (258)
T ss_dssp             --------SS-CHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCC
T ss_pred             --------CC-chHHHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCCCCC
Confidence                    11 122543        44454444 56789999999998865

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.92  E-value=1.7e-09  Score=95.63  Aligned_cols=157  Identities=15%  Similarity=0.063  Sum_probs=105.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ--LT   96 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~   96 (397)
                      ..+|.+|||||++-||..+++.|.+     .|.+|++.+|+....     .....++..+.+|++|++++++.++.  +|
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~-----~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iD   81 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAA-----AGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFD   81 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHH-----cCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCC
Confidence            4578999999999999999999999     899999999975321     00124678899999999877665543  56


Q ss_pred             CeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        97 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      .+++.|+......      ++.+..+++|+.|+-.+.+++.+.   ..+--+|+.+||...+      .|      .   
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~------~g------~---  146 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF------QG------G---  146 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------SC------C---
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC------CC------C---
Confidence            6667665432211      145678899999998888865442   1123567777643211      11      0   


Q ss_pred             CCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          168 EDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       168 E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                            +. ...|+.        .+.++..+ ..+|+++-.+-|+.|--
T Consensus       147 ------~~-~~~Y~asKaav~~ltr~lA~El-a~~gIrVNaV~PG~i~T  187 (247)
T 4hp8_A          147 ------IR-VPSYTAAKHGVAGLTKLLANEW-AAKGINVNAIAPGYIET  187 (247)
T ss_dssp             ------SS-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             ------CC-ChHHHHHHHHHHHHHHHHHHHH-hhcCeEEEEEeeCCCCC
Confidence                  11 112553        45555444 56789999999998865

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.79  E-value=2.2e-08  Score=92.65  Aligned_cols=116  Identities=12%  Similarity=0.006  Sum_probs=72.1

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCC-----------CC-----CCCCC---CCceEEEccC-
Q 015961           25 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRP-----------KP-----NWNAD---HLVEYVQCDV-   82 (397)
Q Consensus        25 ~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-----------~~-----~~~~~---~~v~~~~~Dl-   82 (397)
                      .+|++|||||  +|.||.+++++|++     .|++|++++|++           ..     .....   ..+.++.+|+ 
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   82 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLAS-----AGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAA   82 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHT-----TTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTT
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHH-----CCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            3578999999  89999999999999     899999998642           00     00000   0134444443 


Q ss_pred             -----------CC--------HHHHHHHH-------ccCCCeeEEEEecc---cC-C----CcHHHHHHhHHHHHHHHHH
Q 015961           83 -----------SD--------PEETQAKL-------SQLTDVTHIFYVTW---TN-R----STEAENCKINGSMFRNVLR  128 (397)
Q Consensus        83 -----------~d--------~~~l~~~~-------~~~~~V~h~a~~~~---~~-~----~~~~~~~~~nv~gt~~ll~  128 (397)
                                 +|        .+++..++       ..+|.++|.|+...   .. .    ++.+..+++|+.|+.++++
T Consensus        83 ~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           83 FDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             CSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                       22        22333322       35667778766321   11 1    1345678999999999999


Q ss_pred             HHcccCCCcceEEEecC
Q 015961          129 AVIPNAPNLRHVCLQTG  145 (397)
Q Consensus       129 a~~~~~~~~~~~~~~s~  145 (397)
                      ++...-.+-.+|+++||
T Consensus       163 ~~~~~m~~~g~Iv~isS  179 (315)
T 2o2s_A          163 HFGPIMNEGGSAVTLSY  179 (315)
T ss_dssp             HHSTTEEEEEEEEEEEE
T ss_pred             HHHHHHhcCCEEEEEec
Confidence            98764111146666664

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.75  E-value=1.7e-08  Score=93.60  Aligned_cols=115  Identities=13%  Similarity=0.085  Sum_probs=71.9

Q ss_pred             CCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCC----------CCCCC-----------------CC----
Q 015961           26 QSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRP----------KPNWN-----------------AD----   72 (397)
Q Consensus        26 ~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~----------~~~~~-----------------~~----   72 (397)
                      +|++|||||  +|.||.+++++|++     .|++|++++|++          .....                 ..    
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRA-----AGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHH-----TTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHH-----CCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            578999999  89999999999999     899999998631          00000                 00    


Q ss_pred             -CCceEEEccC------------CC--------HHHHHHH-------HccCCCeeEEEEecc---cC-C----CcHHHHH
Q 015961           73 -HLVEYVQCDV------------SD--------PEETQAK-------LSQLTDVTHIFYVTW---TN-R----STEAENC  116 (397)
Q Consensus        73 -~~v~~~~~Dl------------~d--------~~~l~~~-------~~~~~~V~h~a~~~~---~~-~----~~~~~~~  116 (397)
                       ..+.++.+|+            +|        .+++..+       +..+|.++|.|+...   .. .    +..+..+
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence             0024444443            22        1123322       235777899887431   11 1    1346678


Q ss_pred             HhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961          117 KINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus       117 ~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                      ++|+.|+.++++++...-.+-.+|+++||
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~g~Iv~isS  192 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEGGSALALSY  192 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             hHhhHHHHHHHHHHHHHHhcCceEEEEec
Confidence            99999999999988764111146666664

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.72  E-value=1.8e-08  Score=101.59  Aligned_cols=116  Identities=9%  Similarity=-0.034  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC---------CCC-----CCCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK---------PNW-----NADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~---------~~~-----~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      .+|.+|||||+|.||.+++++|++     +|++|++++|...         ...     ....+ ....+|+.|.+++.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~-----~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~D~~d~~~~~~   91 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAE-----RGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG-GEAVADYNSVIDGAK   91 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEC--------------CHHHHHHHHHHTT-CCEEECCCCGGGHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC-CeEEEEeCCHHHHHH
Confidence            468999999999999999999999     8999999988321         100     00011 124589999887766


Q ss_pred             HHc-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCC
Q 015961           91 KLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT  146 (397)
Q Consensus        91 ~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~  146 (397)
                      +++       .+|.++|.|+......      ++.+..+++|+.|+.++++++...  ..+..+|+.+||.
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~  162 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSN  162 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCH
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence            665       4677888877532211      145677899999999999988432  1234678877753

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.69  E-value=5.2e-08  Score=90.64  Aligned_cols=115  Identities=10%  Similarity=0.051  Sum_probs=75.5

Q ss_pred             CCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCC------------CCC-------CCCCCCceEEEccCCC
Q 015961           26 QSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRP------------KPN-------WNADHLVEYVQCDVSD   84 (397)
Q Consensus        26 ~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~------------~~~-------~~~~~~v~~~~~Dl~d   84 (397)
                      +|.+|||||++  .||.+++++|++     .|++|++..|++            ...       ......+.++.+|+++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~-----~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   76 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSK-----RNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASF   76 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTC
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHH-----CCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccc
Confidence            47899999875  999999999999     899999776543            000       0011236788889877


Q ss_pred             H--H------------------HHHHHHc-------cCCCeeEEEEeccc-CC-------CcHHHHHHhHHHHHHHHHHH
Q 015961           85 P--E------------------ETQAKLS-------QLTDVTHIFYVTWT-NR-------STEAENCKINGSMFRNVLRA  129 (397)
Q Consensus        85 ~--~------------------~l~~~~~-------~~~~V~h~a~~~~~-~~-------~~~~~~~~~nv~gt~~ll~a  129 (397)
                      .  +                  ++.++++       .+|.++|.|+.... ..       +.....+++|+.|+.++.++
T Consensus        77 ~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  156 (329)
T 3lt0_A           77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKY  156 (329)
T ss_dssp             SSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence            6  5                  4444332       35667777653211 11       13466789999999999998


Q ss_pred             HcccCCCcceEEEecC
Q 015961          130 VIPNAPNLRHVCLQTG  145 (397)
Q Consensus       130 ~~~~~~~~~~~~~~s~  145 (397)
                      +...-..-.+|+++||
T Consensus       157 ~~p~m~~~g~Iv~isS  172 (329)
T 3lt0_A          157 FVNIMKPQSSIISLTY  172 (329)
T ss_dssp             HGGGEEEEEEEEEEEC
T ss_pred             HHHHHhhCCeEEEEeC
Confidence            8764111146776664

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.69  E-value=4.3e-08  Score=107.38  Aligned_cols=116  Identities=12%  Similarity=0.036  Sum_probs=81.1

Q ss_pred             CCCEEEEEcCCCh-hHHHHHHHccCCCCCCCCcEEEEEe-CCCCCC------C-----CCCCCceEEEccCCCHHHHHHH
Q 015961           25 YQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W-----NADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        25 ~~~~ILVtGatGf-iG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~------~-----~~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      .+|++|||||+|. ||.++++.|++     .|++|++++ |+....      .     .....+.++.+|++|.+++..+
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~-----~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQ-----GGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHH-----CCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            4589999999998 99999999999     899999985 543211      0     0123577899999999888776


Q ss_pred             Hc-------------cCCCeeEEEEecccC---C------CcHHHHHHhHHHHHHHHHHHHccc---C-CCcceEEEecC
Q 015961           92 LS-------------QLTDVTHIFYVTWTN---R------STEAENCKINGSMFRNVLRAVIPN---A-PNLRHVCLQTG  145 (397)
Q Consensus        92 ~~-------------~~~~V~h~a~~~~~~---~------~~~~~~~~~nv~gt~~ll~a~~~~---~-~~~~~~~~~s~  145 (397)
                      +.             .+|.++|.|+.....   .      +.....+++|+.++.+++++++..   . .+-.+|+.+||
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS  828 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  828 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence            53             356688887653221   0      123567899999999999887322   1 11246777764

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.64  E-value=3.3e-08  Score=91.65  Aligned_cols=106  Identities=16%  Similarity=0.146  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCCC---CCCCCce-EEEccCCCHHHHHHHHccCCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW---NADHLVE-YVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~~---~~~~~v~-~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      +++||+||||+||+|+.++..|+.     +|  ++|+++++++....   ..+.... -+.+ +.+..++.++++++|.|
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~-----~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvV   80 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKM-----NPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLI   80 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHH-----CTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEE
Confidence            346899999999999999999987     56  78999997653100   0000011 1122 23355678889999999


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      +|+++..........++...|+.+++++++++.+.+++
T Consensus        81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~  118 (326)
T 1smk_A           81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPR  118 (326)
T ss_dssp             EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            99976433333345677899999999999999987643

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.64  E-value=1e-08  Score=79.99  Aligned_cols=73  Identities=18%  Similarity=0.141  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      .|+++|+|+|+ |++|+.+++.|.+     .| ++|++++|++... .....++.++.+|+.+.+++.+.+.++|.|+|+
T Consensus         3 ~~~~~v~I~G~-G~iG~~~~~~l~~-----~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   76 (118)
T 3ic5_A            3 AMRWNICVVGA-GKIGQMIAALLKT-----SSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISA   76 (118)
T ss_dssp             TTCEEEEEECC-SHHHHHHHHHHHH-----CSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHh-----CCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            35579999999 9999999999998     78 8999999975421 011247788999999999999999999988887


Q ss_pred             E
Q 015961          102 F  102 (397)
Q Consensus       102 a  102 (397)
                      +
T Consensus        77 ~   77 (118)
T 3ic5_A           77 A   77 (118)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.62  E-value=7.5e-09  Score=96.16  Aligned_cols=112  Identities=12%  Similarity=0.013  Sum_probs=77.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-------EEEEEeCC----CCCC-----CCCCCCceEEEccCCCHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARR----PKPN-----WNADHLVEYVQCDVSDPEETQ   89 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-------~V~~l~R~----~~~~-----~~~~~~v~~~~~Dl~d~~~l~   89 (397)
                      ++||+||||+||+|++++..|+.     +|+       +|+++++.    ....     ...+....+ ..|+....++.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~   78 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPM   78 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcH
Confidence            35899999999999999999987     453       79998887    2100     000000111 23555445577


Q ss_pred             HHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEec
Q 015961           90 AKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQT  144 (397)
Q Consensus        90 ~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s  144 (397)
                      ++++++|.|+|+|+.......+..+++..|+.+++++++++.+.+ ++. +++++|
T Consensus        79 ~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a-~ii~~S  133 (329)
T 1b8p_A           79 TAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNI-KVLVVG  133 (329)
T ss_dssp             HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTC-EEEECS
T ss_pred             HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEEcc
Confidence            889999999999775433334677889999999999999999874 443 444443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.60  E-value=1.6e-07  Score=97.17  Aligned_cols=153  Identities=19%  Similarity=0.154  Sum_probs=103.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcc-CCCCCCCCcE-EEEEeCCCCCCC----------CCCCCceEEEccCCCHHHHHHH
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWK-VYGVARRPKPNW----------NADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~-~~~~~~~g~~-V~~l~R~~~~~~----------~~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      .+++++|||||+|-||..+++.|. +     +|.+ |++++|+.....          ....++.++.||++|.+++.++
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~-----~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~  602 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIE-----RGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKV  602 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHT-----SSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHH-----cCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            456899999999999999999998 7     7884 899999732210          0123577899999999999998


Q ss_pred             HccC------CCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCC
Q 015961           92 LSQL------TDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        92 ~~~~------~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                      ++.+      |.|+|.|+.....    .  +..+..+++|+.|+.++.+++..   .+ +|+.+||...+      .|. 
T Consensus       603 ~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~---~l-~iV~~SS~ag~------~g~-  671 (795)
T 3slk_A          603 LASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP---DV-ALVLFSSVSGV------LGS-  671 (795)
T ss_dssp             HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT---TS-EEEEEEETHHH------HTC-
T ss_pred             HHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh---CC-EEEEEccHHhc------CCC-
Confidence            8764      3366665532111    0  13466788999999999998843   34 77777653322      221 


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhHHHHH----HHHHhcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTLEDIL----FEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l----~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                    + ....|+..|.+    +... +..|+++..+-|+.+-.
T Consensus       672 --------------~-g~~~YaAaka~~~alA~~~-~~~Gi~v~sI~pG~v~t  708 (795)
T 3slk_A          672 --------------G-GQGNYAAANSFLDALAQQR-QSRGLPTRSLAWGPWAE  708 (795)
T ss_dssp             --------------S-SCHHHHHHHHHHHHHHHHH-HHTTCCEEEEEECCCSC
T ss_pred             --------------C-CCHHHHHHHHHHHHHHHHH-HHcCCeEEEEECCeECc
Confidence                          1 11226654333    3333 56789999999988765

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.52  E-value=7.1e-08  Score=102.58  Aligned_cols=102  Identities=14%  Similarity=0.056  Sum_probs=74.1

Q ss_pred             CCCEEEEEcCCCh-hHHHHHHHccCCCCCCCCcEEEEEe-CCCCCC------C-CC----CCCceEEEccCCCHHHHHHH
Q 015961           25 YQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W-NA----DHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        25 ~~~~ILVtGatGf-iG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~------~-~~----~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      ++|++|||||+|. ||.++++.|++     .|++|++++ |+....      . ..    ...+.++.+|++|.+++.++
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~-----~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQ-----GGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHH-----HTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHH-----CcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            3578999999998 99999999998     899999884 543221      1 00    12467899999999887766


Q ss_pred             Hc-------------cCCCeeEEEEecccC---CC------cHHHHHHhHHHHHHHHHHHHc
Q 015961           92 LS-------------QLTDVTHIFYVTWTN---RS------TEAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        92 ~~-------------~~~~V~h~a~~~~~~---~~------~~~~~~~~nv~gt~~ll~a~~  131 (397)
                      ++             .+|.++|.|+.....   .+      .....+++|+.++.+++++++
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~  611 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQK  611 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            53             366688887653221   11      235567899999999988873

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.51  E-value=8.3e-08  Score=104.95  Aligned_cols=101  Identities=14%  Similarity=0.067  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCCh-hHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CC-CCCCceEEEccCCCHHHHHHH
Q 015961           25 YQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WN-ADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        25 ~~~~ILVtGatGf-iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~-~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      ++|++|||||+|. ||.++++.|++     .|++|++++++....           .. ....+.++.+|++|.+++..+
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~-----~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLS-----GGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHH-----CCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            4589999999999 99999999999     899999986442210           00 123577899999999988776


Q ss_pred             Hc-----------cCCCeeEEEEecccC---C------CcHHHHHHhHHHHHHHHHHHH
Q 015961           92 LS-----------QLTDVTHIFYVTWTN---R------STEAENCKINGSMFRNVLRAV  130 (397)
Q Consensus        92 ~~-----------~~~~V~h~a~~~~~~---~------~~~~~~~~~nv~gt~~ll~a~  130 (397)
                      +.           .+|.++|.|+.....   .      +.....+++|+.|+.++++++
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~  784 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQ  784 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            63           356688887753221   1      123567899999999888764

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.45  E-value=1.6e-07  Score=86.46  Aligned_cols=99  Identities=14%  Similarity=0.120  Sum_probs=68.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeC--CCCCC-----------CCCCCCceEEEccCCCHHHHHHH
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVAR--RPKPN-----------WNADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R--~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      +||+||||+||+|++++..|+.     ++.  ++.++++  .....           ......+++...+    +++.++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~-----~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a   71 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAK-----EPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI   71 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHT-----CTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG
T ss_pred             CEEEEECCCChhHHHHHHHHHh-----CCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH
Confidence            3799999999999999999987     443  6888887  32100           0000122222211    124567


Q ss_pred             HccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961           92 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  134 (397)
Q Consensus        92 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  134 (397)
                      ++++|.|+|+|+..........++++.|+.+++++++++++.+
T Consensus        72 l~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~  114 (313)
T 1hye_A           72 IDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC  114 (313)
T ss_dssp             GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8999999999875433333567889999999999999999876

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.41  E-value=3.2e-08  Score=90.74  Aligned_cols=98  Identities=13%  Similarity=0.079  Sum_probs=67.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeC--CCCCC----------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVAR--RPKPN----------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R--~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      +||+||||+||+|+.++..|+.     +++  ++.++++  .....          ......+++.. +  +    .+++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~-----~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~   68 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIAL-----RDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDT   68 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGG
T ss_pred             CEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHh
Confidence            4899999999999999999987     443  6888887  32110          00011222222 1  1    3458


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      +++|.|+|+|+..........+++..|+.+++++++++++.+++
T Consensus        69 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~  112 (303)
T 1o6z_A           69 AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDD  112 (303)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            89999999976543333356778899999999999999987543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.21  E-value=1.6e-06  Score=87.04  Aligned_cols=116  Identities=16%  Similarity=0.023  Sum_probs=77.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CC-CCCCceEEEccC-CCHHHH----HHHHcc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN-ADHLVEYVQCDV-SDPEET----QAKLSQ   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~-~~~~v~~~~~Dl-~d~~~l----~~~~~~   94 (397)
                      ++|.+|||||++-||..+++.|.+     +|++|++.+|+....    .. ....+..+.+|+ .+.+.+    .+.+..
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~-----~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAK-----YGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHH-----CCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            458899999999999999999999     899999988743211    00 112345667888 555432    223445


Q ss_pred             CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           95 LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        95 ~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                      +|.++|.|+.....  .    ++.+..+++|+.|+.++.+++...  ..+-.+|+.+||
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS  454 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITS  454 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            77788887643211  1    145667899999998888877543  112356777765

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.17  E-value=9.6e-07  Score=85.39  Aligned_cols=102  Identities=15%  Similarity=0.164  Sum_probs=71.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC-CCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  102 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a  102 (397)
                      +++|+|+| +|++|+++++.|++     .|++|++++|+....  .. ...++..+.+|+.|.+++.+++.++|.|+|++
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~-----~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTD-----SGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHT-----TTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-----CcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            47899998 89999999999998     789999999975321  11 11347788999999999999999999899986


Q ss_pred             EecccCCCcHHHHHH--hH-------HHHHHHHHHHHcccC
Q 015961          103 YVTWTNRSTEAENCK--IN-------GSMFRNVLRAVIPNA  134 (397)
Q Consensus       103 ~~~~~~~~~~~~~~~--~n-------v~gt~~ll~a~~~~~  134 (397)
                      .... ...-....++  .|       ...+.+++++|++.+
T Consensus        77 ~~~~-~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG  116 (450)
T 1ff9_A           77 PYTF-HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG  116 (450)
T ss_dssp             C--C-HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred             cccc-chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence            4211 1001111122  12       236778899988865

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.13  E-value=8.2e-07  Score=80.80  Aligned_cols=75  Identities=17%  Similarity=0.058  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ..++++|||||+|.+|++++..|++     .|++|++++|+....      .....++.++.+|++|.+++.+.++.+|.
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~-----~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~Dv  191 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAG-----EGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHF  191 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCE
Confidence            3568999999999999999999998     799999999974321      00002456788999999999999998988


Q ss_pred             eeEEEE
Q 015961           98 VTHIFY  103 (397)
Q Consensus        98 V~h~a~  103 (397)
                      |+|+++
T Consensus       192 lVn~ag  197 (287)
T 1lu9_A          192 VFTAGA  197 (287)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            888864

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.08  E-value=6.6e-05  Score=71.44  Aligned_cols=76  Identities=12%  Similarity=0.013  Sum_probs=56.1

Q ss_pred             CCCCCEEEEEcCCChhHHH--HHHHccCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceEEEcc
Q 015961           23 RSYQSVALIVGVTGIVGNS--LAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCD   81 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~--lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~D   81 (397)
                      ...+|++|||||++-||.+  +++.|.+     .|++|++++|+.....                   .....+..+.+|
T Consensus        57 ~~~gK~aLVTGassGIG~A~aia~ala~-----~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D  131 (418)
T 4eue_A           57 FRGPKKVLIVGASSGFGLATRISVAFGG-----PEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIED  131 (418)
T ss_dssp             CCCCSEEEEESCSSHHHHHHHHHHHHSS-----SCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHHh-----CCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEee
Confidence            3567899999999999999  9999998     7999999998653311                   011346789999


Q ss_pred             CCCHHHHHHHHcc-------CCCeeEEEE
Q 015961           82 VSDPEETQAKLSQ-------LTDVTHIFY  103 (397)
Q Consensus        82 l~d~~~l~~~~~~-------~~~V~h~a~  103 (397)
                      ++|.++++.+++.       +|.++|.|+
T Consensus       132 vtd~~~v~~~v~~i~~~~G~IDiLVnNAG  160 (418)
T 4eue_A          132 AFSNETKDKVIKYIKDEFGKIDLFVYSLA  160 (418)
T ss_dssp             TTCHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            9999877665542       344555544

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.08  E-value=4.5e-06  Score=72.45  Aligned_cols=73  Identities=14%  Similarity=0.200  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHH-
Q 015961           25 YQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE-   87 (397)
Q Consensus        25 ~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~-   87 (397)
                      .+|+||||||                ||.+|.+++++|++     .|++|+.+.|+.........++..+  |+...++ 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~-----~Ga~V~lv~~~~~~~~~~~~~~~~~--~v~s~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLS-----AGYEVCLITTKRALKPEPHPNLSIR--EITNTKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHH-----TTCEEEEEECTTSCCCCCCTTEEEE--ECCSHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHH-----CCCEEEEEeCCccccccCCCCeEEE--EHhHHHHH
Confidence            4689999999                99999999999999     8999999999753221112355444  5555543 


Q ss_pred             ---HHHHHccCCCeeEEEEe
Q 015961           88 ---TQAKLSQLTDVTHIFYV  104 (397)
Q Consensus        88 ---l~~~~~~~~~V~h~a~~  104 (397)
                         +.+.+.++|.++|.|+.
T Consensus        75 ~~~v~~~~~~~Dili~aAAv   94 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAV   94 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBC
T ss_pred             HHHHHHhcCCCCEEEEcCcc
Confidence               34455678888888764

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.06  E-value=2.2e-07  Score=86.03  Aligned_cols=111  Identities=17%  Similarity=0.105  Sum_probs=71.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCC--CC------CC--CCCCceEEEccCCCHHHHHHHHcc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPK--PN------WN--ADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~--~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      +||+||||+|+||++++..|.......  +-..++++++...  ..      +.  ..+-+.    ++.......+.+++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFKD   79 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhCC
Confidence            689999999999999999998732211  1123888887531  00      00  001111    11112234567899


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      +|.|+|+|+....+..+..+.++.|+..++++++++++++++-.+++
T Consensus        80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vi  126 (333)
T 5mdh_A           80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVI  126 (333)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            99999987543333336778899999999999999999865433444

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.06  E-value=2.8e-06  Score=80.09  Aligned_cols=92  Identities=15%  Similarity=0.088  Sum_probs=66.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  106 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~  106 (397)
                      +||+|.|| |++|+.+++.|.+      .++|++.+|+........+.+..+.+|+.|.+++.++++++|.|++++..  
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~------~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~--   87 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD------EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPG--   87 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT------TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCG--
T ss_pred             cEEEEECC-CHHHHHHHHHHhc------CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCC--
Confidence            58999998 9999999999975      57899988865321111245678899999999999999999988886321  


Q ss_pred             cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961          107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  144 (397)
Q Consensus       107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  144 (397)
                       . -            ...++++|.+++   +|++-+|
T Consensus        88 -~-~------------~~~v~~~~~~~g---~~yvD~s  108 (365)
T 3abi_A           88 -F-L------------GFKSIKAAIKSK---VDMVDVS  108 (365)
T ss_dssp             -G-G------------HHHHHHHHHHHT---CEEEECC
T ss_pred             -c-c------------cchHHHHHHhcC---cceEeee
Confidence             0 0            124788888775   4555443

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.00  E-value=5.2e-06  Score=76.31  Aligned_cols=106  Identities=16%  Similarity=0.145  Sum_probs=72.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC----CC--CCC-CceEEEccCCCHHHHHHHHccCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----WN--ADH-LVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----~~--~~~-~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      +||.|+||+|++|+.++..|+.     ++  .+|+++++.+...    +.  ..+ .++...+    ..++.++++++|.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~-----~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDv   71 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKN-----SPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLPDCLKGCDV   71 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHT-----CTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHh-----CCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC----CCCHHHHhCCCCE
Confidence            3799999999999999999987     55  6899999875110    00  001 1111111    1346678999999


Q ss_pred             eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      |+++++..........+....|+..++.+++++.+..+....++
T Consensus        72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv  115 (314)
T 1mld_A           72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI  115 (314)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence            99986643333335567889999999999999988765544333

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.99  E-value=2.7e-05  Score=73.12  Aligned_cols=75  Identities=13%  Similarity=0.038  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceEEEccCCCH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSDP   85 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d~   85 (397)
                      -+|++|||||++-||.++++.|++.    .|++|++++|+.....                   .....+..+.+|++|+
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g----~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFG----CGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSD  121 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHH----HCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHh----cCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCH
Confidence            4689999999999999999999861    3889999988643211                   0112466789999999


Q ss_pred             HHHHHHHc-------cCCCeeEEEE
Q 015961           86 EETQAKLS-------QLTDVTHIFY  103 (397)
Q Consensus        86 ~~l~~~~~-------~~~~V~h~a~  103 (397)
                      +++..+++       .+|.++|.|+
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG  146 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLA  146 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCc
Confidence            87766554       3455666554

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=97.96  E-value=9e-06  Score=93.59  Aligned_cols=118  Identities=17%  Similarity=0.126  Sum_probs=81.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCC---------C-CCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      .+|++|||||+|-||..+++.|.+     +|++ |++++|+....         + ....++.++.+|++|.+++.++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~-----~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~ 1957 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRL-----RGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLIT 1957 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHH-----CCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHH
Confidence            468999999999999999999998     7987 77788875432         0 012346788999999988776654


Q ss_pred             c------CCCeeEEEEeccc------CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCc
Q 015961           94 Q------LTDVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTK  147 (397)
Q Consensus        94 ~------~~~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~  147 (397)
                      .      +|.|+|.|+....      ..+..+..+++|+.|+.++.+++........+|+.+||..
T Consensus      1958 ~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~a 2023 (2512)
T 2vz8_A         1958 EATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVS 2023 (2512)
T ss_dssp             HHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHH
T ss_pred             HHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchh
Confidence            3      4557777653211      1113455678999999999888776544457888887643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.94  E-value=5.9e-06  Score=82.90  Aligned_cols=115  Identities=10%  Similarity=-0.038  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC--------CCC------CCCCCceEEEccCCCHHHH--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK--------PNW------NADHLVEYVQCDVSDPEET--   88 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~--------~~~------~~~~~v~~~~~Dl~d~~~l--   88 (397)
                      .+|.+|||||++-||..+++.|.+     +|++|++.+|+..        ...      ....+-+ ..+|+.|.+++  
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~-----~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~   80 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAK-----LGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDK   80 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----cCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHH
Confidence            458899999999999999999999     8999999887541        000      0000111 23566665322  


Q ss_pred             -----HHHHccCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           89 -----QAKLSQLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        89 -----~~~~~~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                           .+.+..+|.++|.|+.....  .    ++.+..+++|+.|+-++.+++...  ..+-.+|+.+||
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS  150 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS  150 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence                 22344577788877643211  1    145678899999998888876543  111356777765

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.93  E-value=4e-06  Score=67.40  Aligned_cols=70  Identities=16%  Similarity=0.134  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCeeEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  101 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h~  101 (397)
                      +++|+|+|+ |.+|+.+++.|.+     .|++|++++|++... .....+...+.+|..+.+.+.++ +.++|.|+++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~-----~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   77 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHR-----MGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVA   77 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHH-----TTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence            467999997 9999999999998     789999999875321 11123567788999998877665 6677777665

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.91  E-value=1.9e-06  Score=69.35  Aligned_cols=69  Identities=19%  Similarity=0.160  Sum_probs=51.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH  100 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h  100 (397)
                      +++|+|+|+ |++|+++++.|.+     .|++|+++++++... .....++.++.+|.++++.+.++ +.++|.|+.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~-----~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~   76 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTA-----AGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLI   76 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHH-----CCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence            368999996 9999999999998     899999999976421 01124678899999999888764 334554443

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.89  E-value=0.00015  Score=68.61  Aligned_cols=75  Identities=12%  Similarity=-0.004  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-------------------CCCCceEEEccCCCH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-------------------ADHLVEYVQCDVSDP   85 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-------------------~~~~v~~~~~Dl~d~   85 (397)
                      .+|++|||||++-||.++++.|.+.    .|++|++++|+......                   ....+..+.+|++|+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~----~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~  135 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFG----FGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSD  135 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHH----HCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHh----CCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCH
Confidence            4789999999999999999999861    38899999987543210                   112456789999999


Q ss_pred             HHHHHHHc--------cCCCeeEEEE
Q 015961           86 EETQAKLS--------QLTDVTHIFY  103 (397)
Q Consensus        86 ~~l~~~~~--------~~~~V~h~a~  103 (397)
                      ++++++++        .+|.++|.|+
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG  161 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLA  161 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCc
Confidence            87655443        2455555544

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.89  E-value=5.7e-06  Score=67.62  Aligned_cols=70  Identities=10%  Similarity=0.121  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC---CC--CCCCCceEEEccCCCHHHHHHH-HccCCCee
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---NW--NADHLVEYVQCDVSDPEETQAK-LSQLTDVT   99 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~---~~--~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~   99 (397)
                      +++|+|+|+ |.+|+++++.|.+     .|++|++++|++..   ..  ....++.++.+|.++++.+.++ +.++|.|+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~-----~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQ-----RGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHH-----CCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence            468999995 9999999999998     79999999997421   00  0124688999999999988776 77777544


Q ss_pred             EE
Q 015961          100 HI  101 (397)
Q Consensus       100 h~  101 (397)
                      .+
T Consensus        77 ~~   78 (153)
T 1id1_A           77 AL   78 (153)
T ss_dssp             EC
T ss_pred             Ee
Confidence            43

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.75  E-value=3.6e-05  Score=62.88  Aligned_cols=71  Identities=15%  Similarity=0.086  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCC-CCCceEEEccCCCHHHHHHH-HccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNA-DHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~-~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h~  101 (397)
                      .+++|+|+|+ |.+|..+++.|.+     .|++|++++|++... ... ..++..+.+|..+.+.+.++ +.++|.|+.+
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~-----~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASS-----SGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            4578999995 9999999999998     799999999976432 112 24677888999888777654 5667755554

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.73  E-value=6.3e-05  Score=65.07  Aligned_cols=72  Identities=18%  Similarity=0.029  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHH
Q 015961           24 SYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE   87 (397)
Q Consensus        24 ~~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~   87 (397)
                      ..+|+||||||                ||.+|.++++.|.+     .|++|+++.|+..-..  ..++  ..+|+.+.++
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~-----~Ga~V~l~~~~~~l~~--~~g~--~~~dv~~~~~   76 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAAR-----RGANVTLVSGPVSLPT--PPFV--KRVDVMTALE   76 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHH-----TTCEEEEEECSCCCCC--CTTE--EEEECCSHHH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHH-----CCCEEEEEECCccccc--CCCC--eEEccCcHHH
Confidence            45789999999                79999999999999     8999999988652111  1233  3578888765


Q ss_pred             HHH----HHccCCCeeEEEEe
Q 015961           88 TQA----KLSQLTDVTHIFYV  104 (397)
Q Consensus        88 l~~----~~~~~~~V~h~a~~  104 (397)
                      +.+    .+..+|.++|.|+.
T Consensus        77 ~~~~v~~~~~~~Dili~~Aav   97 (226)
T 1u7z_A           77 MEAAVNASVQQQNIFIGCAAV   97 (226)
T ss_dssp             HHHHHHHHGGGCSEEEECCBC
T ss_pred             HHHHHHHhcCCCCEEEECCcc
Confidence            433    34567878888764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.70  E-value=1.1e-05  Score=64.91  Aligned_cols=73  Identities=22%  Similarity=0.105  Sum_probs=55.8

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCe
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDV   98 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V   98 (397)
                      ++..++++|+|.|+ |.+|..+++.|.+     .|++|+++++++... .....++.++.+|.++++.+..+ +.++|.|
T Consensus         2 ~~~~~~~~viIiG~-G~~G~~la~~L~~-----~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~v   75 (140)
T 3fwz_A            2 NAVDICNHALLVGY-GRVGSLLGEKLLA-----SDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWL   75 (140)
T ss_dssp             CCCCCCSCEEEECC-SHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred             CcccCCCCEEEECc-CHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEE
Confidence            45667789999995 9999999999998     799999999986431 01124788999999999887664 4556544


Q ss_pred             e
Q 015961           99 T   99 (397)
Q Consensus        99 ~   99 (397)
                      +
T Consensus        76 i   76 (140)
T 3fwz_A           76 I   76 (140)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.66  E-value=9.4e-06  Score=64.87  Aligned_cols=69  Identities=14%  Similarity=0.121  Sum_probs=51.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHH-HccCCCeeEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  101 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h~  101 (397)
                      ++|+|+|+ |++|+.+++.|.+     .|++|++++|++...  .....++.++.+|..+.+.+.+. +.++|.|+++
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~-----~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSE-----KGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV   76 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence            58999996 9999999999998     789999999975321  10112567888999998877654 5667766665

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.62  E-value=1e-05  Score=75.01  Aligned_cols=104  Identities=13%  Similarity=0.105  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      .+||.|+||+|++|+.++..|+.     .|  .+|++++......          .....++.+ .      .+..++++
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~-----~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t------~d~~~al~   75 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAM-----MRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T------SDIKEALT   75 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHH-----TTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E------SCHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHh-----cCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c------CCHHHHhC
Confidence            46899999999999999988876     44  4799999864211          011112221 1      23456789


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      ++|.|+++|+....+..+..+.+..|+...+.+.+++.+.+++..+++
T Consensus        76 dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vl  123 (343)
T 3fi9_A           76 DAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVI  123 (343)
T ss_dssp             TEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred             CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEE
Confidence            999888886643323335778889999999999999998876554343

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.58  E-value=3.9e-05  Score=73.15  Aligned_cols=70  Identities=19%  Similarity=0.172  Sum_probs=55.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC---cEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHcc-
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g---~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      ++|+|+|| |++|+.+++.|++     .|   .+|++.+|+..+.      ..  ...++..+.+|+.|.+++.+++++ 
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~-----~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAM-----NREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHT-----CTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh
Confidence            68999998 9999999999998     55   3899999975321      00  013588899999999999999988 


Q ss_pred             -CCCeeEEE
Q 015961           95 -LTDVTHIF  102 (397)
Q Consensus        95 -~~~V~h~a  102 (397)
                       +|.|+|++
T Consensus        76 ~~DvVin~a   84 (405)
T 4ina_A           76 KPQIVLNIA   84 (405)
T ss_dssp             CCSEEEECS
T ss_pred             CCCEEEECC
Confidence             78788874

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.55  E-value=0.00061  Score=79.01  Aligned_cols=104  Identities=12%  Similarity=0.020  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcCCCh-hHHHHHHHccCCCCCCCCcEEEEEeCCCCC-----C------C-CCCCCceEEEccCCCHHHHHH
Q 015961           24 SYQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVARRPKP-----N------W-NADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        24 ~~~~~ILVtGatGf-iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-----~------~-~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      ..+|.+|||||++- ||..+++.|++     .|.+|++.+|+...     .      . .....+..+.+|++|.+++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~-----~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~ 2208 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLD-----GGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDK 2208 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHH-----TTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHH-----CCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Confidence            46789999999999 99999999999     89999999997543     0      0 011246678999999998877


Q ss_pred             HHcc-----------CCCeeEEEEe----c---cc----CCCcH----HHHHHhHHHHHHHHHHHHcc
Q 015961           91 KLSQ-----------LTDVTHIFYV----T---WT----NRSTE----AENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        91 ~~~~-----------~~~V~h~a~~----~---~~----~~~~~----~~~~~~nv~gt~~ll~a~~~  132 (397)
                      +++.           +|.++|.|+.    .   ..    ...+.    +..+++|+.++..++.++..
T Consensus      2209 lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~ 2276 (3089)
T 3zen_D         2209 LVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSK 2276 (3089)
T ss_dssp             HHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6432           3445555442    0   00    01112    23378889888887776654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.55  E-value=3.1e-05  Score=74.98  Aligned_cols=73  Identities=16%  Similarity=0.160  Sum_probs=57.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~  103 (397)
                      +++|+|+|| |++|+.+++.|++.    .+++|++++|+..+.  .....++..+.+|+.|.+++.+++.++|.|++++.
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~----~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp   97 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAAN----DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIP   97 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTS----TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhC----CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence            468999997 99999999999982    378999999975321  10113567788999999999999999998988844

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.43  E-value=5.5e-05  Score=63.61  Aligned_cols=70  Identities=17%  Similarity=0.165  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH--HccCCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK--LSQLTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~--~~~~~~V~h  100 (397)
                      .+++|+|+| .|.+|..+++.|.+     . |++|++++|++... .....++..+.+|.++.+.+.++  +.++|.|+.
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~-----~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRA-----RYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLL  111 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHH-----HHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHh-----ccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence            456899999 69999999999998     8 99999999976421 01113677889999998877665  556665544

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.31  E-value=7.1e-05  Score=65.62  Aligned_cols=69  Identities=9%  Similarity=-0.069  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH  100 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h  100 (397)
                      ...++|+|+|+ |.+|+.+++.|.+     .|+ |++++|++... ... .++.++.+|.+|++.+..+ +.++|.|+.
T Consensus         7 ~~~~~viI~G~-G~~G~~la~~L~~-----~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~   77 (234)
T 2aef_A            7 AKSRHVVICGW-SESTLECLRELRG-----SEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIV   77 (234)
T ss_dssp             ---CEEEEESC-CHHHHHHHHHSTT-----SEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHh-----CCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence            34578999996 9999999999998     799 99999876431 111 4688999999999988766 666765444

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.24  E-value=5.8e-05  Score=65.44  Aligned_cols=68  Identities=15%  Similarity=0.079  Sum_probs=52.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH  100 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h  100 (397)
                      ++|+|+|+ |.+|+++++.|.+     .|++|+++++++...  .....++.++.+|.++.+.+.++ +.++|.|+-
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~-----~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~   71 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLS-----RKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVI   71 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence            37999995 9999999999998     799999999976431  11113678999999999988776 566665443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.95  E-value=0.00016  Score=66.86  Aligned_cols=104  Identities=13%  Similarity=0.111  Sum_probs=67.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC--------C--CCCCC-ceEEEccCCCHHHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN--------W--NADHL-VEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~--------~--~~~~~-v~~~~~Dl~d~~~l~~~~   92 (397)
                      .-||.|+||+|.||+.|+-.|...+....+  .++.+++..+...        +  ...+. ...+.++  |   ..+++
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~---~~~a~   98 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--D---PRVAF   98 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--C---HHHHT
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--C---hHHHh
Confidence            459999999999999999888653322111  3688888653210        0  00011 1122221  1   35678


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  134 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  134 (397)
                      +++|.|+-+|+...-+.....+.++.|..-.+.+.+++.+..
T Consensus        99 ~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a  140 (345)
T 4h7p_A           99 DGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVA  140 (345)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhc
Confidence            999987777654333334788999999999999999988764

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.93  E-value=0.00094  Score=61.34  Aligned_cols=100  Identities=15%  Similarity=0.056  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----------CC-CCCCceEEEccCCCHHHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WN-ADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~-~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      .+||.|+|+ |++|+.++..|+.     .|+  +|+++++.....          .+ ....+++...|       .+++
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~-----~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~   71 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALIN-----QGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDC   71 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHh
Confidence            368999995 9999999999987     555  899999864211          00 01234444443       2357


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      +++|.|+.+++....+..+..+.+..|+...+.+.+++.+.++...
T Consensus        72 ~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~  117 (326)
T 3pqe_A           72 KDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGI  117 (326)
T ss_dssp             TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred             CCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeE
Confidence            8888888875532222235778889999999999999998766554

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.79  E-value=0.0019  Score=60.17  Aligned_cols=74  Identities=9%  Similarity=-0.039  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcc-CCCCCCCCcEEEEEeCCCCCCCC-------------------CCCCceEEEccCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPKPNWN-------------------ADHLVEYVQCDVSD   84 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~-~~~~~~~g~~V~~l~R~~~~~~~-------------------~~~~v~~~~~Dl~d   84 (397)
                      -+|++|||||+.-+|.+.+..|. .     .|..|+++.|.......                   .......+.||++|
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~-----~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d  123 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFG-----YGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFS  123 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHH-----HCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhh-----CCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCC
Confidence            46899999999999999888886 4     57889999886432210                   01245689999999


Q ss_pred             HHHHHHHHc-------cCCCeeEEEE
Q 015961           85 PEETQAKLS-------QLTDVTHIFY  103 (397)
Q Consensus        85 ~~~l~~~~~-------~~~~V~h~a~  103 (397)
                      .+.+++.++       ++|.++|.++
T Consensus       124 ~e~i~~vi~~i~~~~G~IDiLVhS~A  149 (401)
T 4ggo_A          124 DEIKAQVIEEAKKKGIKFDLIVYSLA  149 (401)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEecc
Confidence            987666554       3555777654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.75  E-value=0.001  Score=61.02  Aligned_cols=102  Identities=13%  Similarity=0.060  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++||.|+|| |.+|+.++..|+.     .+.  +|+++++.....          ......+.+...|       .++++
T Consensus         9 ~~kV~ViGa-G~vG~~~a~~l~~-----~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~   75 (326)
T 3vku_A            9 HQKVILVGD-GAVGSSYAYAMVL-----QGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAK   75 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhc
Confidence            468999996 9999999999987     454  899999864211          0001234444333       24578


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  140 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  140 (397)
                      ++|.|++.|+....+..+..+.++.|+.-.+.+.+++.+.+++...+
T Consensus        76 ~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~il  122 (326)
T 3vku_A           76 DADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFL  122 (326)
T ss_dssp             TCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEE
T ss_pred             CCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence            89988887654222223567788999999999999998876655433

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.65  E-value=0.0005  Score=62.91  Aligned_cols=100  Identities=15%  Similarity=0.127  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC------CCC-----CCCceEEE-ccCCCHHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------WNA-----DHLVEYVQ-CDVSDPEETQAK   91 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~------~~~-----~~~v~~~~-~Dl~d~~~l~~~   91 (397)
                      |++||.|+|| |.+|+.++..|..     .|+ +|+++++++...      ...     ....++.. .|      . ++
T Consensus         1 M~~kI~VIGa-G~vG~~~a~~la~-----~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a   67 (309)
T 1ur5_A            1 MRKKISIIGA-GFVGSTTAHWLAA-----KELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-AD   67 (309)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHH-----TTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HH
Confidence            4579999998 9999999999987     675 888888865321      000     01122221 23      2 34


Q ss_pred             HccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961           92 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus        92 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      ++++|.|+..++....+.....+....|+...+.+.+.+.+.+++.
T Consensus        68 ~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a  113 (309)
T 1ur5_A           68 TANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNA  113 (309)
T ss_dssp             GTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTC
T ss_pred             HCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence            7888887777543221112345667889999999999998875443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.62  E-value=0.00072  Score=61.74  Aligned_cols=106  Identities=15%  Similarity=0.150  Sum_probs=68.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCC-CCCCCCcEEEEEeCCCCCC-----CCC-CCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN-----WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~-~~~~~g~~V~~l~R~~~~~-----~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      +||.|+||+|.+|+.++..|... +   -..++++++..+...     +.. ...+++... .+  ....+.++++|.|+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~---~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivi   74 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLP---SGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVL   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSC---TTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC---CCceEEEEecCCCchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEE
Confidence            47999999999999999888752 1   124799999865110     000 111222111 00  01245688999777


Q ss_pred             EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961          100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus       100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      ..++....+..+..+.++.|+.-.+.+.+++.+.+++..
T Consensus        75 i~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~  113 (312)
T 3hhp_A           75 ISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKAC  113 (312)
T ss_dssp             ECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcE
Confidence            765433222236788999999999999999988766554

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.37  E-value=0.0076  Score=55.20  Aligned_cols=103  Identities=15%  Similarity=0.079  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCC------CC----CCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNW------NA----DHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~------~~----~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++||.|+|| |++|..++-.|+.     ++.  +|++++.+.....      ..    ...+++. .  .+    .++++
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~-----~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~   73 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMAL-----RQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVK   73 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHH-----TTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhC
Confidence            358999997 9999999999987     455  8999998753320      00    0122222 1  12    34588


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      ++|.|+..++...-+.....+....|+...+.+.+.+.+.++....++
T Consensus        74 ~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv  121 (318)
T 1y6j_A           74 DCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV  121 (318)
T ss_dssp             TCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             CCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEE
Confidence            898777775432212224567788999999999999988765444433

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.25  E-value=0.0015  Score=62.21  Aligned_cols=68  Identities=12%  Similarity=0.069  Sum_probs=52.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH  100 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h  100 (397)
                      ++|+|.| .|-+|+.+++.|.+     .|++|+++++++... .....++.++.||.++++.|..+ +..++.|+.
T Consensus         5 ~~viIiG-~Gr~G~~va~~L~~-----~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv   74 (413)
T 3l9w_A            5 MRVIIAG-FGRFGQITGRLLLS-----SGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN   74 (413)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred             CeEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence            5799999 49999999999998     799999999986431 01124678899999999988775 555654433

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.24  E-value=0.0091  Score=55.58  Aligned_cols=111  Identities=14%  Similarity=0.046  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe--CCCCC--C--------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA--RRPKP--N--------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~--R~~~~--~--------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ..||.|+||+|+||++++-.|...+.......|...+  .....  .        ....+-..-+.  +.+  ...+.++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~--~~y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI--DPYEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES--CHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec--CCHHHhC
Confidence            4689999999999999999997643332112254433  32110  0        00001111111  111  1246788


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHccc-CCCcceE
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN-APNLRHV  140 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~  140 (397)
                      ++|.|+-.|+....+..+..+.++.|+.-.+.+.+++.+. ++..+.+
T Consensus       108 daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivl  155 (375)
T 7mdh_A          108 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVL  155 (375)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            8987776655332233367889999999999999999875 5554433

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.24  E-value=0.0083  Score=55.26  Aligned_cols=102  Identities=14%  Similarity=0.100  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC------C-----CCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW------N-----ADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~------~-----~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++||.|+|| |.+|+.++..|..     .|+ +|+++++++....      .     .....++..     ..++.++++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~-----~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea~~   77 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCAL-----RELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALT   77 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----HTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHHhC
Confidence            368999997 9999999999998     687 8999998753210      0     000111111     022445788


Q ss_pred             cCCCeeEEEEecccCCC-----cHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           94 QLTDVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      ++|.|+-.++.......     ...+....|+.-.+.+.+.+.+..+...
T Consensus        78 ~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~  127 (331)
T 1pzg_A           78 GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTF  127 (331)
T ss_dssp             TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             CCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcE
Confidence            89876666432211111     3456677888888899998888754443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.21  E-value=0.0043  Score=53.07  Aligned_cols=69  Identities=13%  Similarity=0.042  Sum_probs=44.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCce-EEE-ccCCCHHHHHHHHccCCCeeEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVE-YVQ-CDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~-~~~-~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ++|+|+||+|++|+.+++.|.+     .|++|++++|++........... .+. +|+. ..++.++++++|.|+++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~   71 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLAT-----LGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLT   71 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEe
Confidence            3799999999999999999998     79999999997532100000000 000 1221 12345667788877775

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.16  E-value=0.0041  Score=57.05  Aligned_cols=103  Identities=17%  Similarity=0.151  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC------C-----CCCCCceEE-EccCCCHHHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------W-----NADHLVEYV-QCDVSDPEETQAKL   92 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~------~-----~~~~~v~~~-~~Dl~d~~~l~~~~   92 (397)
                      .+||.|+|| |.+|..++..|..     .|+ +|+++++.+...      .     +.....++. ..|   .    +++
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~-----~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~----~a~   73 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGL-----KELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y----AAI   73 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G----GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H----HHH
Confidence            368999997 9999999999987     677 999999876421      0     000112222 223   1    467


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      +++|.|+..++....+..+..+.+..|+.-.+.+.+.+.+.++....++
T Consensus        74 ~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv  122 (324)
T 3gvi_A           74 EGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVIC  122 (324)
T ss_dssp             TTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEe
Confidence            8888777664422111224567788999999999999988765544443

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.12  E-value=0.0076  Score=54.35  Aligned_cols=102  Identities=17%  Similarity=0.116  Sum_probs=67.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-----CCCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-----NADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-----~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      +||.|+|| |+||+.++-.|...+...   ++.+++..+...      +     .......+...+  |.    +.++++
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~---el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~a   70 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVD---EIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGS   70 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCS---EEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCC---EEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCC
Confidence            47999995 999999999887643332   799998764211      0     000112222221  22    247788


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      |.|+-.|+...-+..+..+.++.|..-.+.+.+++.+++++..
T Consensus        71 DvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~ai  113 (294)
T 2x0j_A           71 EIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESK  113 (294)
T ss_dssp             SEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred             CEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            8777776544434447899999999999999999998866544

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.11  E-value=0.0047  Score=56.36  Aligned_cols=102  Identities=12%  Similarity=0.065  Sum_probs=65.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC------C-----CCCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN------W-----NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~------~-----~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +||.|+|+ |.+|+.++..|+.     .+.  +|+++++.+...      +     +....+++...|  +    .++++
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~-----~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~   68 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVAR-----QDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTE   68 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhC
Confidence            47999996 9999999999987     454  899999876421      0     000122332112  1    24578


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  140 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  140 (397)
                      ++|.|+.+++....+..+..+.+..|+.-.+.+.+++.+.++....+
T Consensus        69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vi  115 (314)
T 3nep_X           69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTII  115 (314)
T ss_dssp             TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEE
Confidence            88877776543222223567888999999999999999876555433

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.09  E-value=0.0067  Score=54.80  Aligned_cols=103  Identities=17%  Similarity=0.112  Sum_probs=69.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----------C-CCCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +||.|+|| |.+|+.++..|..     .|+  +|+++++++...          . ......++...  .|    .++++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~-----~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~   68 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLL-----NLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLK   68 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhC
Confidence            47999998 9999999999987     566  899999875321          0 00012222211  12    34678


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      ++|.|+..++....+..+..+.+..|+.-.+.+.+.+.+.++....++
T Consensus        69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv  116 (294)
T 1oju_A           69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV  116 (294)
T ss_dssp             TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred             CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence            888777765533222236778899999999999999998765554433

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.07  E-value=0.0077  Score=55.16  Aligned_cols=102  Identities=18%  Similarity=0.119  Sum_probs=69.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC------CCC-----CCCceEE-EccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------WNA-----DHLVEYV-QCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~------~~~-----~~~v~~~-~~Dl~d~~~l~~~~~   93 (397)
                      +||.|+| +|.+|+.++..|..     .+. +|+++++++...      +..     ....++. ..|       .++++
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~-----~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-------~~a~~   72 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALI-----KQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-------YKDLE   72 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-------GGGGT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-------HHHHC
Confidence            6899999 59999999999987     565 899999876421      000     0122232 222       24678


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      ++|.|+..++....+.....+.+..|+...+.+.+.+.+.++....++
T Consensus        73 ~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~viv  120 (321)
T 3p7m_A           73 NSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVIC  120 (321)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEE
Confidence            888777775432222235778889999999999999998865544433

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.04  E-value=0.0014  Score=60.74  Aligned_cols=66  Identities=9%  Similarity=-0.059  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHH-HccCCCe
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-LSQLTDV   98 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V   98 (397)
                      .++|+|.|+ |.+|+.+++.|.+     .|+ |+++++++........++.++.||.+|++.+.++ +++++.|
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~-----~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~v  181 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRG-----SEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAV  181 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGG-----SCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHh-----CCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEE
Confidence            468999995 9999999999998     799 9999987643111225788999999999988765 5555433

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=95.99  E-value=0.0054  Score=56.33  Aligned_cols=106  Identities=15%  Similarity=0.071  Sum_probs=69.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC---------CC-CCCCceEEEccCCCHHHHHHH
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN---------WN-ADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~---------~~-~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      ...+||.|+|| |.+|+.++..|+.     +|.  +|+++++.....         .. .......+..+  |.    +.
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~-----~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~----~~   84 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILM-----KDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY----SV   84 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHH-----TTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----GG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHh-----CCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----HH
Confidence            34579999996 9999999999987     455  899999864211         00 00111222221  22    24


Q ss_pred             HccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           92 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        92 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      ++++|.|+..|+....+..+..+.++.|+.-.+.+.+++.+.++....++
T Consensus        85 ~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlv  134 (331)
T 4aj2_A           85 TANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLI  134 (331)
T ss_dssp             GTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             hCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            78888777765433222236788999999999999999998865544433

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.98  E-value=0.016  Score=52.51  Aligned_cols=36  Identities=22%  Similarity=0.236  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |.++|.|.||+|.+|+.++..|.+     .|++|++++|++
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~-----~G~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRA-----SGYPISILDRED   55 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHT-----TTCCEEEECTTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHh-----CCCeEEEEECCc
Confidence            556899999999999999999998     799999998864

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.92  E-value=0.0035  Score=60.59  Aligned_cols=65  Identities=20%  Similarity=0.155  Sum_probs=50.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHH-HccCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~   97 (397)
                      |+|+|.| .|-+|++|++.|.+     +||+|+++++++...  ....-++..+.||-++++.|+++ ++.+|.
T Consensus         4 M~iiI~G-~G~vG~~la~~L~~-----~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~   71 (461)
T 4g65_A            4 MKIIILG-AGQVGGTLAENLVG-----ENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADM   71 (461)
T ss_dssp             EEEEEEC-CSHHHHHHHHHTCS-----TTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCE
Confidence            5899999 59999999999998     899999999876431  11112678899999999988775 455553

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.92  E-value=0.0012  Score=59.08  Aligned_cols=34  Identities=18%  Similarity=0.135  Sum_probs=27.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ++|+|+|++|.+|+.+++.+.+.    .+++|+++.+.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~----~~~elva~~d~   39 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALAL----EGVQLGAALER   39 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHS----TTEECCCEECC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEec
Confidence            58999999999999999998753    68897755543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.91  E-value=0.0025  Score=58.21  Aligned_cols=100  Identities=15%  Similarity=0.173  Sum_probs=66.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC--CCC------CC-----CCCCceEEEccCCCHHHHHHHH
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP--KPN------WN-----ADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~--~~~------~~-----~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ++|.|+|+ |.+|+.++..|..     .|+ +|+++++++  ...      ..     ......+...+  |    .+.+
T Consensus         9 ~kv~ViGa-G~vG~~ia~~l~~-----~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~   76 (315)
T 3tl2_A            9 KKVSVIGA-GFTGATTAFLLAQ-----KELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADT   76 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHh
Confidence            68999996 9999999999988     688 999999973  111      00     00011121111  1    2357


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      +++|.|+-.++....+..+..+.+..|+.-.+.+.+++.+.++...
T Consensus        77 ~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~  122 (315)
T 3tl2_A           77 ADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAI  122 (315)
T ss_dssp             TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            7888777665432222236788899999999999999988765543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.91  E-value=0.0051  Score=56.31  Aligned_cols=104  Identities=11%  Similarity=0.027  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      +++||.|+|| |.+|..++..|+.     ++.  +|+++++.....          ......+++.. |  +    .+++
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~-----~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~   70 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQ-----QGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDC   70 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHc-----CCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHh
Confidence            3468999998 9999999999987     333  799999864211          00012333332 2  2    3457


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      +++|.|+..++....+.....+....|+...+.+.+.+.+.++....++
T Consensus        71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  119 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLV  119 (318)
T ss_dssp             TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            8898777765432222224556788999999999999988866555444

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.80  E-value=0.0086  Score=54.99  Aligned_cols=106  Identities=12%  Similarity=0.042  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------C-CCCCCceEEEccCCCHHHHHHHHcc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      +++||.|+|| |.+|..++..|+..+..   -+|+++++.....         . .....+++.. |  +    .+++++
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~---~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~   76 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIA---QEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKD   76 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCC---SEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCC---CEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCC
Confidence            4468999998 99999999998862211   2799999864211         0 0012333332 2  2    345888


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      +|.|+..++....+.....+....|+...+.+.+.+.+.++....++
T Consensus        77 aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  123 (326)
T 2zqz_A           77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV  123 (326)
T ss_dssp             CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            99877765432222224567788999999999999988866555444

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=95.75  E-value=0.0017  Score=60.97  Aligned_cols=73  Identities=14%  Similarity=-0.004  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+++|+|+|+ |-+|..+++.|..     .|++|++++|++...  ....-+.. +.+|..+.+++.+.+.++|.|+++
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~-----~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~  236 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALG-----MGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGA  236 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEEC
Confidence            34589999998 9999999999998     799999999975321  00001122 456777888888889999988776


Q ss_pred             EE
Q 015961          102 FY  103 (397)
Q Consensus       102 a~  103 (397)
                      +.
T Consensus       237 ~g  238 (369)
T 2eez_A          237 VL  238 (369)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.74  E-value=0.022  Score=51.96  Aligned_cols=71  Identities=23%  Similarity=0.130  Sum_probs=50.6

Q ss_pred             ccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc
Q 015961           15 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        15 ~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      +|+........+++|.|.| .|-||+.+++.|..     .|++|++.+|++...    .++....+    ..++.++++.
T Consensus       128 ~W~~~~~~~l~g~tvGIiG-~G~IG~~vA~~l~~-----~G~~V~~~dr~~~~~----~~~~~~~~----~~~l~ell~~  193 (315)
T 3pp8_A          128 LWKPLPEYTREEFSVGIMG-AGVLGAKVAESLQA-----WGFPLRCWSRSRKSW----PGVESYVG----REELRAFLNQ  193 (315)
T ss_dssp             CCCCCCCCCSTTCCEEEEC-CSHHHHHHHHHHHT-----TTCCEEEEESSCCCC----TTCEEEES----HHHHHHHHHT
T ss_pred             ccCCCCCCCcCCCEEEEEe-eCHHHHHHHHHHHH-----CCCEEEEEcCCchhh----hhhhhhcc----cCCHHHHHhh
Confidence            3443323344678999999 79999999999998     899999999976532    23332221    3578888999


Q ss_pred             CCCee
Q 015961           95 LTDVT   99 (397)
Q Consensus        95 ~~~V~   99 (397)
                      +|.|+
T Consensus       194 aDiV~  198 (315)
T 3pp8_A          194 TRVLI  198 (315)
T ss_dssp             CSEEE
T ss_pred             CCEEE
Confidence            98633

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=95.47  E-value=0.0079  Score=50.78  Aligned_cols=38  Identities=26%  Similarity=0.191  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ...+++||||||+|-||..+++.+..     .|++|++++|++
T Consensus        36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G~~V~~~~~~~   73 (198)
T 1pqw_A           36 LSPGERVLIHSATGGVGMAAVSIAKM-----IGARIYTTAGSD   73 (198)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHH-----HTCEEEEEESSH
T ss_pred             CCCCCEEEEeeCCChHHHHHHHHHHH-----cCCEEEEEeCCH
Confidence            44568999999999999999999987     789999999875

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.46  E-value=0.016  Score=52.96  Aligned_cols=102  Identities=15%  Similarity=0.034  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCceEE-EccCCCHHHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYV-QCDVSDPEETQAKL   92 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~-~~Dl~d~~~l~~~~   92 (397)
                      .+||.|+|+ |.+|+.++..|+.     .|.  +|+++++.....          ........+. ..|+.       .+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~-----~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------~~   87 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLM-----KDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------VS   87 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHH-----HCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------SC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------Hh
Confidence            468999997 9999999999987     555  899999864211          0000111222 33432       26


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  140 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  140 (397)
                      +++|.|+-.++....+..+..+.+..|+.-.+.+.+.+.+.++....+
T Consensus        88 ~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~il  135 (330)
T 3ldh_A           88 AGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKE  135 (330)
T ss_dssp             SSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             CCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEE
Confidence            778876666543322223667888999999999999998876554433

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.45  E-value=0.015  Score=53.40  Aligned_cols=99  Identities=17%  Similarity=0.117  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC-------------CCCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-------------NADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~-------------~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      |+++|.|+|| |.+|+.++..|..     .|+ +|+++++++....             ....++.. ..|      + +
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~-----~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~   78 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQ-----KDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN------Y-E   78 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC------H-H
Confidence            5579999997 9999999999988     787 8999998753210             00111111 122      2 3


Q ss_pred             HHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961           91 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus        91 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      +++++|.|+-.++...-+.....+....|+.-.+.+.+.+.+..+..
T Consensus        79 al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a  125 (328)
T 2hjr_A           79 YLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNA  125 (328)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             HHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCe
Confidence            57788866655332111111234566778888888888887765443

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.32  E-value=0.034  Score=52.17  Aligned_cols=67  Identities=15%  Similarity=0.149  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ++++|+|.| .|.+|..+++.+.+     .|++|++++..+...... ---..+.+|..|.+.+.+..+.+|.|
T Consensus        11 ~~~~IlIlG-~G~lg~~la~aa~~-----lG~~viv~d~~~~~p~~~-~ad~~~~~~~~d~~~l~~~~~~~dvi   77 (377)
T 3orq_A           11 FGATIGIIG-GGQLGKMMAQSAQK-----MGYKVVVLDPSEDCPCRY-VAHEFIQAKYDDEKALNQLGQKCDVI   77 (377)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCTTCTTGG-GSSEEEECCTTCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEECCCCChhhh-hCCEEEECCCCCHHHHHHHHHhCCcc
Confidence            457999999 69999999999998     899999998765432110 01146779999999999888888743

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.32  E-value=0.018  Score=52.25  Aligned_cols=98  Identities=18%  Similarity=0.159  Sum_probs=59.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHcc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      +||.|+|| |.+|+.++..|..     .|+  +|+++++++...          ......+++...   +.    +++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~-----~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~   67 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVL-----RGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHG---GH----SELAD   67 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEE---CG----GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEEC---CH----HHhCC
Confidence            47999997 9999999999988     677  899999874210          000012233222   22    35788


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      +|.|+..+.....+.....+....|+...+.+++.+.+..+..
T Consensus        68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~  110 (304)
T 2v6b_A           68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDA  110 (304)
T ss_dssp             CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSS
T ss_pred             CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCe
Confidence            8877766542221222445667889999999999888765443

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.28  E-value=0.024  Score=51.84  Aligned_cols=103  Identities=13%  Similarity=0.045  Sum_probs=67.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC----------C-CCCCCceEEEccCCCHHHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ++||.|+|| |.+|..++..|..     ++  .+|.++++++...          . .....+++.. |  +    .+++
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~-----~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~   72 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVN-----QSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDC   72 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----HCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHh
Confidence            469999998 9999999999987     44  3899998764211          0 0001233332 2  2    3457


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      +++|.|+-.++..........+....|+.-.+.+.+.+.+.++....++
T Consensus        73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv  121 (317)
T 3d0o_A           73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV  121 (317)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            8888777765432222235567788999999999999988765544333

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.24  E-value=0.019  Score=52.45  Aligned_cols=106  Identities=14%  Similarity=0.074  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------C-CCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +.+||.|+|| |.+|+.++..|.....   ..+|+++++++...          . .....+++.. |  +    .++++
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~---~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~   73 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGI---ADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCR   73 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTC---CSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTT
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCC---CCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhC
Confidence            3469999998 9999999999876211   13899999874211          0 0011333332 2  2    23578


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      ++|.|+-.+...........+....|..-.+.+.+.+.+..+....++
T Consensus        74 ~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv  121 (316)
T 1ldn_A           74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (316)
T ss_dssp             TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEE
Confidence            888766664432222224456678888888889988888765444333

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.17  E-value=0.016  Score=51.65  Aligned_cols=35  Identities=23%  Similarity=0.262  Sum_probs=28.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~   65 (397)
                      .||.|+||+|.+|+.+++.+.+.    .+++++++ +|+.
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~----~~~eLv~~~d~~~   43 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAA----PDATLVGALDRTG   43 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHC----TTEEEEEEBCCTT
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEEecC
Confidence            58999999999999999999864    57887775 5653

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=95.06  E-value=0.022  Score=53.00  Aligned_cols=35  Identities=20%  Similarity=0.320  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      |+.+|.|.||||.+|+.+++.|.+.    ..++|+++.+
T Consensus         7 M~~kV~IiGAtG~iG~~llr~L~~~----p~~ev~~i~~   41 (354)
T 1ys4_A            7 MKIKVGVLGATGSVGQRFVQLLADH----PMFELTALAA   41 (354)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTC----SSEEEEEEEE
T ss_pred             ccceEEEECcCCHHHHHHHHHHhcC----CCCEEEEEEc
Confidence            5568999999999999999999874    3568888875

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.03  E-value=0.068  Score=50.26  Aligned_cols=69  Identities=13%  Similarity=-0.021  Sum_probs=51.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ...+++|+|.| .|.+|..+++.+.+     .|++|++++..+...... -.-..+..|..|.+.+.+.++.+|.|
T Consensus        11 ~~~~k~IlIlG-~G~~g~~la~aa~~-----~G~~vi~~d~~~~~~~~~-~ad~~~~~~~~d~~~l~~~~~~~dvI   79 (389)
T 3q2o_A           11 ILPGKTIGIIG-GGQLGRMMALAAKE-----MGYKIAVLDPTKNSPCAQ-VADIEIVASYDDLKAIQHLAEISDVV   79 (389)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSTTCTTTT-TCSEEEECCTTCHHHHHHHHHTCSEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEeCCCCCchHH-hCCceEecCcCCHHHHHHHHHhCCEe
Confidence            34568999999 68999999999998     899999998765332111 11135678999999998988887743

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.03  E-value=0.0097  Score=54.23  Aligned_cols=72  Identities=14%  Similarity=0.103  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCC---CCC------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPK---PNW------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~---~~~------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ..++++||+|| |-+|+.++..|.+     .|. +|++++|.+.   +..      ....++.+...++.+.+++.+.+.
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~-----~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~  225 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAAL-----DGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA  225 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHH-----TTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHH-----CCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc
Confidence            35689999996 8999999999998     787 7999999832   110      000123344567777777777888


Q ss_pred             cCCCeeEE
Q 015961           94 QLTDVTHI  101 (397)
Q Consensus        94 ~~~~V~h~  101 (397)
                      .+|.|+++
T Consensus       226 ~aDiIINa  233 (315)
T 3tnl_A          226 ESVIFTNA  233 (315)
T ss_dssp             TCSEEEEC
T ss_pred             CCCEEEEC
Confidence            88877765

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.91  E-value=0.02  Score=51.42  Aligned_cols=36  Identities=14%  Similarity=0.243  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |.++|.|.|+||.+|+.+++.|.+     .|++|++++|++
T Consensus        10 mmm~I~iIG~tG~mG~~la~~l~~-----~g~~V~~~~r~~   45 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHD-----SAHHLAAIEIAP   45 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHH-----SSSEEEEECCSH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence            446899999889999999999998     799999999875

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=94.76  E-value=0.0094  Score=54.39  Aligned_cols=101  Identities=12%  Similarity=-0.010  Sum_probs=61.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CC-----CCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NA-----DHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~-----~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      +||.|+|| |.+|+.++..|.+..   .|++|+++++++....      ..     ....++...  +|.   .+ ++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~---~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~a   70 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQ---LARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANS   70 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT---CCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC---CCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCC
Confidence            37999997 999999999998621   2789999999753210      00     001111110  222   22 6778


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      |.|+-++...........+.+..|+.-.+.+.+.+.+..+..
T Consensus        71 DvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~  112 (310)
T 1guz_A           71 DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNP  112 (310)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            765555321111112356777889999989998888765433

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=94.75  E-value=0.028  Score=51.15  Aligned_cols=104  Identities=23%  Similarity=0.138  Sum_probs=67.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +||.|+|| |.+|..++..|+.....   .+|+++++.....          ......+++.. +  +    .++++++|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~---~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD   69 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVA---REVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGAR   69 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC---SEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC---CEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCC
Confidence            48999997 99999999999873221   4899999864211          00012333332 2  2    23478888


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      .|+..++....+.....+....|+...+.+.+.+.+.++....++
T Consensus        70 ~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  114 (310)
T 2xxj_A           70 AVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV  114 (310)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEE
Confidence            777765433222235667788999999999999988766554444

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=94.68  E-value=0.048  Score=51.63  Aligned_cols=65  Identities=12%  Similarity=0.008  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      +++|+|.| .|.+|..+++.+.+     .|++|++++ .+..... .......+.+|..|.+.+.++.+.+|.
T Consensus        24 ~~~I~ilG-gG~lg~~l~~aa~~-----lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~   89 (403)
T 3k5i_A           24 SRKVGVLG-GGQLGRMLVESANR-----LNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDV   89 (403)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHH-----HTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCE
Confidence            67999999 59999999999998     799999999 5432111 011124578899999999999888874

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=94.64  E-value=0.032  Score=49.99  Aligned_cols=41  Identities=20%  Similarity=0.258  Sum_probs=28.2

Q ss_pred             CccCCCC--CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCC
Q 015961           20 EPARSYQ--SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARR   64 (397)
Q Consensus        20 ~~~~~~~--~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~   64 (397)
                      +++.+|.  .||.|.||+|-+|+.+++.+.+.    .+.+++++ +|+
T Consensus        13 ~~~~~m~~~irV~V~Ga~GrMGr~i~~~v~~~----~~~eLvg~vd~~   56 (288)
T 3ijp_A           13 EAQTQGPGSMRLTVVGANGRMGRELITAIQRR----KDVELCAVLVRK   56 (288)
T ss_dssp             --------CEEEEESSTTSHHHHHHHHHHHTC----SSEEEEEEBCCT
T ss_pred             hhhhhccCCeEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEecC
Confidence            4444443  58999999999999999999864    57886666 454

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=94.55  E-value=0.083  Score=48.23  Aligned_cols=71  Identities=21%  Similarity=0.175  Sum_probs=49.4

Q ss_pred             ccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc
Q 015961           15 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        15 ~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      +|+........+++|.|.| .|-||+.+++.|..     .|++|++.+|.+....    .+...    ....++.++++.
T Consensus       129 ~W~~~~~~~l~g~tvGIIG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~~----~~~~~----~~~~~l~ell~~  194 (324)
T 3hg7_A          129 LWQSHPYQGLKGRTLLILG-TGSIGQHIAHTGKH-----FGMKVLGVSRSGRERA----GFDQV----YQLPALNKMLAQ  194 (324)
T ss_dssp             CCCCCCCCCSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCCCT----TCSEE----ECGGGHHHHHHT
T ss_pred             CCcCCCCcccccceEEEEE-ECHHHHHHHHHHHh-----CCCEEEEEcCChHHhh----hhhcc----cccCCHHHHHhh
Confidence            3543333455678999999 89999999999988     7999999999764321    11111    123457788888


Q ss_pred             CCCee
Q 015961           95 LTDVT   99 (397)
Q Consensus        95 ~~~V~   99 (397)
                      +|.|+
T Consensus       195 aDvV~  199 (324)
T 3hg7_A          195 ADVIV  199 (324)
T ss_dssp             CSEEE
T ss_pred             CCEEE
Confidence            88633

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=94.55  E-value=0.033  Score=51.83  Aligned_cols=35  Identities=14%  Similarity=0.215  Sum_probs=29.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+|.|.||+|.+|+.+++.|.+.    ...+|+++.++.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~----p~~elvai~~~~   51 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANH----PHFQVTLMTADR   51 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTC----SSEEEEEEBCST
T ss_pred             cEEEEECcCCHHHHHHHHHHHcC----CCcEEEEEeCch
Confidence            58999999999999999999874    356888887643

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=94.53  E-value=0.0085  Score=54.86  Aligned_cols=100  Identities=16%  Similarity=0.104  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCC------C-----CCCceEEEccCCCHHHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWN------A-----DHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~------~-----~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      +.++|.|+|| |.+|+.++..|.+     .|+ +|+++++++.....      .     .....+...  .|   + +++
T Consensus         3 ~~~kI~VIGa-G~~G~~ia~~la~-----~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~a~   70 (317)
T 2ewd_A            3 ERRKIAVIGS-GQIGGNIAYIVGK-----DNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-ADI   70 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHH-----HTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHh
Confidence            3468999997 9999999999998     788 89999987532100      0     001111110  12   2 346


Q ss_pred             ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961           93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      +++|.|+-+++..........+....|....+.+++.+.+..+.
T Consensus        71 ~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~  114 (317)
T 2ewd_A           71 SGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPN  114 (317)
T ss_dssp             TTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCC
Confidence            77876666543222222244556677888888888888776443

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=94.45  E-value=0.028  Score=53.51  Aligned_cols=68  Identities=13%  Similarity=0.044  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ++++|+|.| .|.+|..+++.+.+     .|++|++++..+...... -.-+.+.+|..|.+.+.+..+++|.|+
T Consensus        34 ~~~~IlIlG-~G~lg~~~~~aa~~-----lG~~v~v~d~~~~~p~~~-~ad~~~~~~~~d~~~l~~~a~~~D~V~  101 (419)
T 4e4t_A           34 PGAWLGMVG-GGQLGRMFCFAAQS-----MGYRVAVLDPDPASPAGA-VADRHLRAAYDDEAALAELAGLCEAVS  101 (419)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCTTCHHHH-HSSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCCCcCchhh-hCCEEEECCcCCHHHHHHHHhcCCEEE
Confidence            457999999 59999999999998     899999998654321000 011356789999999988888887544

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=94.35  E-value=0.037  Score=50.80  Aligned_cols=39  Identities=26%  Similarity=0.310  Sum_probs=33.9

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ....+++||||||+|-||..+++.+..     .|++|++++|++
T Consensus       142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G~~V~~~~~~~  180 (333)
T 1v3u_A          142 GVKGGETVLVSAAAGAVGSVVGQIAKL-----KGCKVVGAAGSD  180 (333)
T ss_dssp             CCCSSCEEEEESTTBHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCCCEEEEecCCCcHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence            344568999999999999999999988     799999999864

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=94.35  E-value=0.085  Score=49.35  Aligned_cols=66  Identities=15%  Similarity=0.070  Sum_probs=48.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ++|||+|+ |.+|..+++.|.+     .|++|++++..+....... .-..+.+|..|.+.+.+...++|.|+
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~-----~G~~v~~~~~~~~~~~~~~-~~~~~~~~~~d~~~l~~~~~~~d~v~   67 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKK-----MGFYVIVLDPTPRSPAGQV-ADEQIVAGFFDSERIEDLVKGSDVTT   67 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESSTTCTTGGG-SSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeCCCCCchhhh-CceEEECCCCCHHHHHHHHhcCCEEE
Confidence            68999995 8999999999988     7999999987543311100 11356789999998888887777543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=94.27  E-value=0.038  Score=50.02  Aligned_cols=36  Identities=22%  Similarity=0.154  Sum_probs=30.7

Q ss_pred             CCCE-EEEEc-CC-----------------ChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSV-ALIVG-VT-----------------GIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~-ILVtG-at-----------------GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++ ||||+ +|                 |-.|.++++++++     .|++|+.+.+..
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~-----~Ga~V~lv~g~~   89 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLA-----AGYGVLFLYRAR   89 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHH-----TTCEEEEEEETT
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHH-----CCCEEEEEecCC
Confidence            4566 99985 45                 9999999999999     899999999854

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=94.20  E-value=0.045  Score=48.88  Aligned_cols=66  Identities=14%  Similarity=0.083  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      .+++|+|+|+ |-+|+.++..|.+     .|. +|++++|...+...-...+...     ..+++.+.+.++|.|+++
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~-----~G~~~v~v~~R~~~~a~~la~~~~~~-----~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYK-----IVRPTLTVANRTMSRFNNWSLNINKI-----NLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHT-----TCCSCCEEECSCGGGGTTCCSCCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHhcccc-----cHhhHHHHhcCCCEEEEC
Confidence            4578999995 8999999999998     788 7999999865432111122221     234566667778876665

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=94.12  E-value=0.044  Score=50.65  Aligned_cols=35  Identities=23%  Similarity=0.255  Sum_probs=29.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+|.|.||||.+|+.+++.|.+.    ...+|+++.++.
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~----p~~elv~v~s~~   39 (345)
T 2ozp_A            5 KTLSIVGASGYAGGEFLRLALSH----PYLEVKQVTSRR   39 (345)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTC----TTEEEEEEBCST
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC----CCcEEEEEECch
Confidence            68999999999999999999874    356888887643

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.11  E-value=0.028  Score=48.21  Aligned_cols=62  Identities=21%  Similarity=0.108  Sum_probs=42.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      +++|.|+| +|.+|+.+++.|.+     .|++|++++|++... .....+++..        ++.++++++|.|+.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVG-----SGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence            36899999 89999999999998     789999999975321 0011234332        234567778765544

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=94.11  E-value=0.13  Score=47.68  Aligned_cols=65  Identities=22%  Similarity=0.196  Sum_probs=45.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCC-CHHHHHHHHccCCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVS-DPEETQAKLSQLTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~-d~~~l~~~~~~~~~V   98 (397)
                      |+|+|+| .|..|..++..+.+     .|++|++++.++....... --+++..|.. |.+.+....+++|.|
T Consensus         2 K~I~ilG-gg~~g~~~~~~Ak~-----~G~~vv~vd~~~~~~~~~~-aD~~~~~~~~~d~~~~~~~~~~~D~v   67 (363)
T 4ffl_A            2 KTICLVG-GKLQGFEAAYLSKK-----AGMKVVLVDKNPQALIRNY-ADEFYCFDVIKEPEKLLELSKRVDAV   67 (363)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCTTCTTTTT-SSEEEECCTTTCHHHHHHHHTSSSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCChhHhh-CCEEEECCCCcCHHHHHHHhcCCCEE
Confidence            7999999 58999999999988     8999999987664321110 1135566654 566666666777743

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=94.07  E-value=0.05  Score=50.30  Aligned_cols=39  Identities=15%  Similarity=0.145  Sum_probs=33.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|||+||+|-+|..+++.+..     .|.+|++++|++.
T Consensus       167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga~V~~~~~~~~  205 (347)
T 2hcy_A          167 LMAGHWVAISGAAGGLGSLAVQYAKA-----MGYRVLGIDGGEG  205 (347)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECSTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHH-----CCCcEEEEcCCHH
Confidence            34568999999999999999999987     7899999998754

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=93.99  E-value=0.018  Score=52.76  Aligned_cols=99  Identities=13%  Similarity=0.070  Sum_probs=62.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC------CCC-----CCCceEEE-ccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------WNA-----DHLVEYVQ-CDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~------~~~-----~~~v~~~~-~Dl~d~~~l~~~~~   93 (397)
                      +||.|+|| |.+|..++..|..     .|+ +|+++++++...      ...     ....++.. .|      . ++++
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~-----~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~   71 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQ-----KNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-DDLA   71 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC------G-GGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCC------H-HHhC
Confidence            58999997 9999999999998     677 899888875321      000     01112211 23      2 4578


Q ss_pred             cCCCeeEEEEecccCCCc-----HHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           94 QLTDVTHIFYVTWTNRST-----EAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~-----~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      ++|.|+-.++........     ..+....|+.-.+.+.+.+.+..+...
T Consensus        72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~  121 (322)
T 1t2d_A           72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAF  121 (322)
T ss_dssp             TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence            888766654321111112     456677888888888888887654443

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=93.92  E-value=0.057  Score=42.88  Aligned_cols=35  Identities=23%  Similarity=0.390  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +++|+|+| +|.+|+.+++.|.+     .|++|++.+|++.
T Consensus        21 ~~~v~iiG-~G~iG~~~a~~l~~-----~g~~v~v~~r~~~   55 (144)
T 3oj0_A           21 GNKILLVG-NGMLASEIAPYFSY-----PQYKVTVAGRNID   55 (144)
T ss_dssp             CCEEEEEC-CSHHHHHHGGGCCT-----TTCEEEEEESCHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEcCCHH
Confidence            68999999 59999999999998     7888999998753

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=93.87  E-value=0.1  Score=47.60  Aligned_cols=70  Identities=23%  Similarity=0.173  Sum_probs=48.1

Q ss_pred             ccCccC-ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCce-EEEccCCCHHHHHHHH
Q 015961           15 KFEEDE-PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVE-YVQCDVSDPEETQAKL   92 (397)
Q Consensus        15 ~~~~~~-~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~-~~~~Dl~d~~~l~~~~   92 (397)
                      +|+... .....+++|.|.| .|.||+.+++.|..     .|++|++.+|++....    .+. .+.     ..++.+++
T Consensus       125 ~W~~~~~~~~l~gktvGIiG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~~----~~~~~~~-----~~~l~ell  189 (324)
T 3evt_A          125 QWALPMTTSTLTGQQLLIYG-TGQIGQSLAAKASA-----LGMHVIGVNTTGHPAD----HFHETVA-----FTATADAL  189 (324)
T ss_dssp             CSSCSSCCCCSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSCCCCT----TCSEEEE-----GGGCHHHH
T ss_pred             CcccCCCCccccCCeEEEEC-cCHHHHHHHHHHHh-----CCCEEEEECCCcchhH----hHhhccc-----cCCHHHHH
Confidence            454332 3345678999999 89999999999998     7999999999764321    111 111     23456678


Q ss_pred             ccCCCee
Q 015961           93 SQLTDVT   99 (397)
Q Consensus        93 ~~~~~V~   99 (397)
                      +.+|.|+
T Consensus       190 ~~aDvV~  196 (324)
T 3evt_A          190 ATANFIV  196 (324)
T ss_dssp             HHCSEEE
T ss_pred             hhCCEEE
Confidence            8888643

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=93.79  E-value=0.17  Score=47.44  Aligned_cols=68  Identities=12%  Similarity=0.049  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCe
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDV   98 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V   98 (397)
                      .+.++|||+|+ |.+|..+++.+.+     .|++|++++..+...... -.-+.+..|..|.+.+.+.++  ++|.|
T Consensus         9 ~~~~~ili~g~-g~~~~~~~~a~~~-----~G~~v~~~~~~~~~~~~~-~~d~~~~~~~~d~~~l~~~~~~~~~d~v   78 (391)
T 1kjq_A            9 PAATRVMLLGS-GELGKEVAIECQR-----LGVEVIAVDRYADAPAMH-VAHRSHVINMLDGDALRRVVELEKPHYI   78 (391)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHT-----TTCEEEEEESSTTCGGGG-GSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHH-----cCCEEEEEECCCCCchhh-hccceEECCCCCHHHHHHHHHHcCCCEE
Confidence            34579999985 8999999999998     899999998765331100 011356788889888877765  45533

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=93.78  E-value=0.052  Score=50.07  Aligned_cols=36  Identities=28%  Similarity=0.287  Sum_probs=26.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   62 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~   62 (397)
                      |+++|+|.||||.+|+.|++.|.+...  ...+|+++.
T Consensus         5 m~~kV~IiGAtG~iG~~llr~L~~~~~--~~~elv~i~   40 (340)
T 2hjs_A            5 QPLNVAVVGATGSVGEALVGLLDERDF--PLHRLHLLA   40 (340)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTC--CCSCEEEEE
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCC--CcEEEEEEe
Confidence            456899999999999999999984110  234566665

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=93.74  E-value=0.042  Score=50.85  Aligned_cols=37  Identities=14%  Similarity=0.305  Sum_probs=27.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCC-CCCCcEEEEEeC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDT-PGGPWKVYGVAR   63 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~-~~~g~~V~~l~R   63 (397)
                      ++|+|.||||++|+.|++.|++.+. .+...+|+.+.+
T Consensus        10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s   47 (352)
T 2nqt_A           10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTA   47 (352)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEEC
Confidence            5899999999999999999998310 000347888764

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=93.57  E-value=0.068  Score=49.52  Aligned_cols=39  Identities=23%  Similarity=0.240  Sum_probs=33.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|||+||+|-+|..+++.+..     .|++|++++|++.
T Consensus       168 ~~~g~~vlV~GasggiG~~~~~~a~~-----~Ga~Vi~~~~~~~  206 (351)
T 1yb5_A          168 VKAGESVLVHGASGGVGLAACQIARA-----YGLKILGTAGTEE  206 (351)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCcCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCChh
Confidence            34568999999999999999999987     7899999998753

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=93.53  E-value=0.048  Score=50.09  Aligned_cols=38  Identities=16%  Similarity=0.055  Sum_probs=33.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ...+++|||+||+|-||..+++.+..     .|++|++++|++
T Consensus       143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~~Vi~~~~~~  180 (333)
T 1wly_A          143 VKPGDYVLIHAAAGGMGHIMVPWARH-----LGATVIGTVSTE  180 (333)
T ss_dssp             CCTTCEEEETTTTSTTHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence            34568999999999999999999988     789999999875

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=93.51  E-value=0.068  Score=46.74  Aligned_cols=33  Identities=12%  Similarity=0.212  Sum_probs=27.8

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      +|.|.|++|-+|+.+++.+.+.    .+++|+++..+
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~----~~~elva~~d~   34 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAA----DDLTLSAELDA   34 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHC----TTCEEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEcc
Confidence            7999999999999999998752    48898877654

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=93.47  E-value=0.057  Score=48.51  Aligned_cols=61  Identities=18%  Similarity=0.078  Sum_probs=44.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ...+++|.|.| .|.||+.+++.|..     .|++|++.+|++....    .++       ..+++.++++.+|.|+-
T Consensus       119 ~l~g~tvGIIG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~~----~~~-------~~~~l~ell~~aDiV~l  179 (290)
T 3gvx_A          119 LLYGKALGILG-YGGIGRRVAHLAKA-----FGMRVIAYTRSSVDQN----VDV-------ISESPADLFRQSDFVLI  179 (290)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHH-----HTCEEEEECSSCCCTT----CSE-------ECSSHHHHHHHCSEEEE
T ss_pred             eeecchheeec-cCchhHHHHHHHHh-----hCcEEEEEeccccccc----ccc-------ccCChHHHhhccCeEEE
Confidence            45678999999 79999999999998     7999999999764421    111       11245667788886433

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=93.43  E-value=0.043  Score=50.23  Aligned_cols=38  Identities=16%  Similarity=0.003  Sum_probs=33.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ...+++||||||+|-||..+++.+..     .|++|++++|++
T Consensus       138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~~V~~~~~~~  175 (327)
T 1qor_A          138 IKPDEQFLFHAAAGGVGLIACQWAKA-----LGAKLIGTVGTA  175 (327)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHH-----HTCEEEEEESSH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCH
Confidence            34568999999999999999999987     789999999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=93.39  E-value=0.057  Score=49.78  Aligned_cols=38  Identities=16%  Similarity=0.199  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ...+++|||+||+|-+|..+++.+..     .|++|++++|++
T Consensus       153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~G~~V~~~~~~~  190 (345)
T 2j3h_A          153 PKEGETVYVSAASGAVGQLVGQLAKM-----MGCYVVGSAGSK  190 (345)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence            44568999999999999999999987     789999999875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=93.39  E-value=0.051  Score=49.96  Aligned_cols=40  Identities=25%  Similarity=0.372  Sum_probs=34.4

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ....+++|||+||+|-||..+++.+..     .|.+|++++|++.
T Consensus       146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~  185 (336)
T 4b7c_A          146 QPKNGETVVISGAAGAVGSVAGQIARL-----KGCRVVGIAGGAE  185 (336)
T ss_dssp             CCCTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHH
Confidence            345678999999999999999999887     7999999998753

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=93.32  E-value=0.084  Score=48.21  Aligned_cols=97  Identities=22%  Similarity=0.128  Sum_probs=61.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCC--C--------CCCCceEEEccCCCHHHHHHHHcc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNW--N--------ADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~--~--------~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      ++|.|+|+ |.+|+.++..|.+     .|+  +|+++++++....  .        ......+..   +|.    +.+++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~-----~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~   67 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLM-----KGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKG   67 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCC
Confidence            47999997 9999999999988     688  9999998743110  0        000112221   232    24677


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      +|.|+-++...........+....|+...+.+++.+.+..+.
T Consensus        68 aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~  109 (319)
T 1a5z_A           68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPD  109 (319)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            886655533211111135667788988888998888776443

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=93.18  E-value=0.064  Score=48.75  Aligned_cols=39  Identities=23%  Similarity=0.177  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      ....++|.|.| .|.+|..++..|.+     .|++|++.+|++..
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~-----~G~~V~~~dr~~~~   56 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLK-----NGFKVTVWNRTLSK   56 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSGGG
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHH-----CCCeEEEEeCCHHH
Confidence            33346899999 79999999999998     89999999997643

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=93.03  E-value=0.071  Score=49.42  Aligned_cols=38  Identities=13%  Similarity=-0.032  Sum_probs=33.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ...+++|||+||+|-||..+++.+..     .|++|++++|++
T Consensus       160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga~Vi~~~~~~  197 (354)
T 2j8z_A          160 VQAGDYVLIHAGLSGVGTAAIQLTRM-----AGAIPLVTAGSQ  197 (354)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHH-----cCCEEEEEeCCH
Confidence            44568999999999999999999987     789999999875

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=93.02  E-value=0.08  Score=47.76  Aligned_cols=37  Identities=22%  Similarity=0.090  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      |.++|.|.| .|.+|..++..|.+     .||+|++.+|++..
T Consensus        14 ~~~~I~vIG-~G~mG~~~A~~l~~-----~G~~V~~~dr~~~~   50 (296)
T 3qha_A           14 EQLKLGYIG-LGNMGAPMATRMTE-----WPGGVTVYDIRIEA   50 (296)
T ss_dssp             -CCCEEEEC-CSTTHHHHHHHHTT-----STTCEEEECSSTTT
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHH-----CCCeEEEEeCCHHH
Confidence            456899999 79999999999998     89999999998654

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=92.78  E-value=0.15  Score=48.70  Aligned_cols=88  Identities=14%  Similarity=0.069  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc---EEEEEeCCCCCCC-CCCCCceEEEccCCCH---HHHHHHHccCCCe
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW---KVYGVARRPKPNW-NADHLVEYVQCDVSDP---EETQAKLSQLTDV   98 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~---~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~---~~l~~~~~~~~~V   98 (397)
                      +++|+|.| .|-||+.+++.|.++    .++   +|++.+....... ....++++...++++.   +.+.+++++.|.|
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~----~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV   87 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEK----FDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL   87 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHH----BCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhC----CCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence            36899999 799999999999874    233   5887776543221 1112456666666443   3355567665667


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  134 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  134 (397)
                      +++   +.. ..+            ..++++|.+.+
T Consensus        88 IN~---s~~-~~~------------l~Im~acleaG  107 (480)
T 2ph5_A           88 IDV---SIG-ISS------------LALIILCNQKG  107 (480)
T ss_dssp             EEC---CSS-SCH------------HHHHHHHHHHT
T ss_pred             EEC---Ccc-ccC------------HHHHHHHHHcC
Confidence            764   222 111            23789998875

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=92.72  E-value=0.075  Score=48.25  Aligned_cols=101  Identities=15%  Similarity=0.102  Sum_probs=65.1

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC------CC-----CCCCceEEE-ccCCCHHHHHHHHcc
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------WN-----ADHLVEYVQ-CDVSDPEETQAKLSQ   94 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~------~~-----~~~~v~~~~-~Dl~d~~~l~~~~~~   94 (397)
                      ||.|+|| |.+|+.++..|+.     +++ +|+.++++....      ..     ....+++.. .|   .    +++++
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~-----~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~----~a~~~   67 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMM-----RGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS---Y----EDMRG   67 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHH-----HTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC---G----GGGTT
T ss_pred             CEEEECc-CHHHHHHHHHHHh-----CCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC---H----HHhCC
Confidence            5899997 9999999998886     455 699999875321      00     001222222 23   1    35788


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      +|.|+-.++...-+.....+....|+.-.+.+++.+.+.++....++
T Consensus        68 aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  114 (308)
T 2d4a_B           68 SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVI  114 (308)
T ss_dssp             CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            88766664432222225667788999999999999888765444333

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=92.67  E-value=0.079  Score=48.38  Aligned_cols=35  Identities=26%  Similarity=0.320  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |.++|+|.| +|-+|+.++..|.+     .|++|+.++|++
T Consensus         1 M~mkI~IiG-aGaiG~~~a~~L~~-----~g~~V~~~~r~~   35 (320)
T 3i83_A            1 MSLNILVIG-TGAIGSFYGALLAK-----TGHCVSVVSRSD   35 (320)
T ss_dssp             --CEEEEES-CCHHHHHHHHHHHH-----TTCEEEEECSTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHh-----CCCeEEEEeCCh
Confidence            557999998 69999999999998     799999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=92.51  E-value=0.076  Score=48.96  Aligned_cols=39  Identities=23%  Similarity=0.238  Sum_probs=33.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|||+||+|-+|..+++.+..     .|.+|+++++++.
T Consensus       157 ~~~g~~VlV~Gasg~iG~~~~~~a~~-----~Ga~Vi~~~~~~~  195 (342)
T 4eye_A          157 LRAGETVLVLGAAGGIGTAAIQIAKG-----MGAKVIAVVNRTA  195 (342)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSGG
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCHH
Confidence            44568999999999999999999887     7899999998654

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=92.47  E-value=0.12  Score=47.84  Aligned_cols=33  Identities=21%  Similarity=0.367  Sum_probs=28.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   62 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~   62 (397)
                      +.+|.|.||||++|+.+++.|.+.    ...+|+++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~----p~~elvai~   36 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKH----PYLELVKVS   36 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTC----SSEEEEEEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhC----CCcEEEEEe
Confidence            358999999999999999999874    356888885

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=92.46  E-value=0.1  Score=46.41  Aligned_cols=35  Identities=17%  Similarity=-0.011  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++|+|+|+ |-+|+.++..|.+     .|.+|++++|+.
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~-----~G~~V~v~~R~~  152 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLS-----LDCAVTITNRTV  152 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----cCCEEEEEECCH
Confidence            4579999997 7899999999998     788999999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=92.44  E-value=0.086  Score=48.87  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=31.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      ++|||+||+|-||..+++.+..     .|+ +|++++|++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~-----~Ga~~Vi~~~~~~  196 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHF-----LGCSRVVGICGTH  196 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHH-----TTCSEEEEEESCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHH-----CCCCeEEEEeCCH
Confidence            8999999999999999999987     798 999999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=92.43  E-value=0.091  Score=48.40  Aligned_cols=39  Identities=15%  Similarity=0.009  Sum_probs=33.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|||+||+|-+|..+++.+..     .|++|++++|++.
T Consensus       164 ~~~g~~vlV~Gasg~iG~~~~~~a~~-----~G~~Vi~~~~~~~  202 (343)
T 2eih_A          164 VRPGDDVLVMAAGSGVSVAAIQIAKL-----FGARVIATAGSED  202 (343)
T ss_dssp             CCTTCEEEECSTTSTTHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHH
Confidence            34568999999999999999999987     7899999998643

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=92.27  E-value=0.07  Score=48.18  Aligned_cols=72  Identities=15%  Similarity=0.107  Sum_probs=45.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ...+++|||+||+|-+|..+++.+..     .|.+|+++++++.+.. ...-+... ..|..+.+++.+.+.++|.|+.
T Consensus       123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~d~vid  195 (302)
T 1iz0_A          123 ARPGEKVLVQAAAGALGTAAVQVARA-----MGLRVLAAASRPEKLALPLALGAEE-AATYAEVPERAKAWGGLDLVLE  195 (302)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSGGGSHHHHHTTCSE-EEEGGGHHHHHHHTTSEEEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhcCCCE-EEECCcchhHHHHhcCceEEEE
Confidence            34568999999999999999998887     7889999998654320 00012222 2344441334444456665555

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=92.17  E-value=0.079  Score=48.33  Aligned_cols=37  Identities=19%  Similarity=0.096  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~   65 (397)
                      ..|.++|.|.| +|.+|..++..|.+     .| ++|++.+|++
T Consensus        21 ~~M~m~IgvIG-~G~mG~~lA~~L~~-----~G~~~V~~~dr~~   58 (317)
T 4ezb_A           21 QSMMTTIAFIG-FGEAAQSIAGGLGG-----RNAARLAAYDLRF   58 (317)
T ss_dssp             HTSCCEEEEEC-CSHHHHHHHHHHHT-----TTCSEEEEECGGG
T ss_pred             cccCCeEEEEC-ccHHHHHHHHHHHH-----cCCCeEEEEeCCC
Confidence            34668999999 79999999999998     79 9999999975

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=92.16  E-value=0.18  Score=49.87  Aligned_cols=61  Identities=20%  Similarity=0.249  Sum_probs=48.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHH-HccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-LSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~   96 (397)
                      ++|+|.|+ |-+|.++++.|.+     .|++|+++++++.....   -..++.||-+|.+.++++ +..+|
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~-----~g~~v~vid~d~~~~~~---~~~~i~gD~t~~~~L~~agi~~ad  410 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDR-----KPVPFILIDRQESPVCN---DHVVVYGDATVGQTLRQAGIDRAS  410 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHH-----TTCCEEEEESSCCSSCC---SSCEEESCSSSSTHHHHHTTTSCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHH-----CCCCEEEEECChHHHhh---cCCEEEeCCCCHHHHHhcCccccC
Confidence            78999995 9999999999998     89999999998765321   127899999999988664 33444

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=92.15  E-value=0.097  Score=48.59  Aligned_cols=24  Identities=29%  Similarity=0.468  Sum_probs=21.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPL   48 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~   48 (397)
                      |+.+|.|.||||++|..|++.|.+
T Consensus         1 m~~kVaIvGATG~vG~eLlrlL~~   24 (366)
T 3pwk_A            1 MGYTVAVVGATGAVGAQMIKMLEE   24 (366)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHT
T ss_pred             CCcEEEEECCCChHHHHHHHHHhc
Confidence            556899999999999999999887

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=92.14  E-value=0.083  Score=47.70  Aligned_cols=38  Identities=21%  Similarity=0.295  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      .|.+||-+.| .|.+|..+++.|++     .||+|++.+|++.+
T Consensus         3 ~Ms~kIgfIG-LG~MG~~mA~~L~~-----~G~~V~v~dr~~~~   40 (297)
T 4gbj_A            3 AMSEKIAFLG-LGNLGTPIAEILLE-----AGYELVVWNRTASK   40 (297)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEC------
T ss_pred             CCCCcEEEEe-cHHHHHHHHHHHHH-----CCCeEEEEeCCHHH
Confidence            5778999999 89999999999999     89999999998754

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=92.11  E-value=0.1  Score=50.16  Aligned_cols=35  Identities=20%  Similarity=0.080  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |.++|.|.| +|++|..++..|.+     .|++|++++|++
T Consensus         1 M~mkI~VIG-~G~vG~~lA~~La~-----~G~~V~~~D~~~   35 (450)
T 3gg2_A            1 MSLDIAVVG-IGYVGLVSATCFAE-----LGANVRCIDTDR   35 (450)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHh-----cCCEEEEEECCH
Confidence            446899999 69999999999998     799999999975

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=91.98  E-value=0.094  Score=47.61  Aligned_cols=73  Identities=16%  Similarity=0.064  Sum_probs=48.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCce-EEEccCCCHHHHHHHHccCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVE-YVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~-~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +..+++++|.|++..+|+.+++.|+.     .|.+|+.++|+....     ... .... ......++++++.+.+..+|
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~-----~gAtVtv~nR~~~~l~~ra~~la-~~~~~~t~~~~t~~~~L~e~l~~AD  247 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLAN-----DGATVYSVDVNNIQKFTRGESLK-LNKHHVEDLGEYSEDLLKKCSLDSD  247 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHT-----TSCEEEEECSSEEEEEESCCCSS-CCCCEEEEEEECCHHHHHHHHHHCS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHH-----CCCEEEEEeCchHHHHhHHHHHh-hhcccccccccccHhHHHHHhccCC
Confidence            34568999999888899999999998     788999998863211     000 1111 11111134577889999999


Q ss_pred             CeeEE
Q 015961           97 DVTHI  101 (397)
Q Consensus        97 ~V~h~  101 (397)
                      .|+..
T Consensus       248 IVIsA  252 (320)
T 1edz_A          248 VVITG  252 (320)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            76654

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=91.97  E-value=0.11  Score=48.31  Aligned_cols=34  Identities=29%  Similarity=0.241  Sum_probs=27.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      +.+|.|.||||++|..|++.|.+.    ...++..+..
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~h----P~~el~~l~S   40 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNH----PYIKPAYLAG   40 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTC----SSEEEEEEEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC----CCceEEEEEC
Confidence            458999999999999999988875    3457766653

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=91.97  E-value=0.11  Score=48.31  Aligned_cols=34  Identities=29%  Similarity=0.241  Sum_probs=27.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      +.+|.|.||||++|..|++.|.+.    ...++..+..
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~h----P~~el~~l~S   40 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNH----PYIKPAYLAG   40 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTC----SSEEEEEEEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC----CCceEEEEEC
Confidence            458999999999999999988875    3457766653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=91.96  E-value=0.12  Score=47.94  Aligned_cols=40  Identities=20%  Similarity=0.141  Sum_probs=34.4

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ....+++|||+||+|-+|..+++.+..     .|.+|++++|++.
T Consensus       164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~  203 (353)
T 4dup_A          164 GLTEGESVLIHGGTSGIGTTAIQLARA-----FGAEVYATAGSTG  203 (353)
T ss_dssp             CCCTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHHH-----cCCEEEEEeCCHH
Confidence            344568999999999999999999987     7999999998753

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=91.84  E-value=0.067  Score=48.60  Aligned_cols=72  Identities=11%  Similarity=0.084  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCC---CC------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKP---NW------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~---~~------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ..++++||+|| |-.|+.++..|.+     .|. +|++++|.+..   ..      ....+..+...++.+.+.+.+.+.
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~-----~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~  219 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAI-----EGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA  219 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHH-----TTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHH-----cCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc
Confidence            34689999996 9999999999998     787 79999998321   10      000122233445555444455566


Q ss_pred             cCCCeeEE
Q 015961           94 QLTDVTHI  101 (397)
Q Consensus        94 ~~~~V~h~  101 (397)
                      ++|.|+++
T Consensus       220 ~~DiIINa  227 (312)
T 3t4e_A          220 SADILTNG  227 (312)
T ss_dssp             HCSEEEEC
T ss_pred             CceEEEEC
Confidence            67766654

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=91.84  E-value=0.13  Score=44.86  Aligned_cols=39  Identities=28%  Similarity=0.237  Sum_probs=32.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      ..+.++|.|.| +|.+|+.++..|.+     .|++|++.+|++..
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~-----~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALAD-----LGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCChhh
Confidence            34568999998 89999999999998     79999999997643

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=91.84  E-value=0.25  Score=44.21  Aligned_cols=53  Identities=21%  Similarity=0.137  Sum_probs=43.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHH--HHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ--AKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~--~~~~~~~~V~h~  101 (397)
                      ..+++++|.|++|.+|+.++..|++     .|.+|+.+.|+..                    ++.  +.++.+|.|+..
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~~~~T~--------------------~l~l~~~~~~ADIVI~A  217 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMK-----ENATVTIVHSGTS--------------------TEDMIDYLRTADIVIAA  217 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTTSC--------------------HHHHHHHHHTCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCCC--------------------CchhhhhhccCCEEEEC
Confidence            4578999999999999999999998     7899999887421                    234  778888876665

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=91.80  E-value=0.25  Score=45.34  Aligned_cols=60  Identities=12%  Similarity=-0.064  Sum_probs=44.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ...+++|.|.| .|-||+.+++.|..     .|++|++.+|.+...    .....       ..++.++++.+|.|+
T Consensus       168 ~l~gktiGIIG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~----~~~~~-------~~sl~ell~~aDvVi  227 (340)
T 4dgs_A          168 SPKGKRIGVLG-LGQIGRALASRAEA-----FGMSVRYWNRSTLSG----VDWIA-------HQSPVDLARDSDVLA  227 (340)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECSSCCTT----SCCEE-------CSSHHHHHHTCSEEE
T ss_pred             cccCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEcCCcccc----cCcee-------cCCHHHHHhcCCEEE
Confidence            34578999999 79999999999998     899999999876442    12211       124567788888633

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=91.80  E-value=0.088  Score=48.34  Aligned_cols=34  Identities=21%  Similarity=0.279  Sum_probs=28.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      .+|.|.||||++|..|++.|.++    ..+++..+.++
T Consensus         5 ~kv~IvGatG~vG~~l~~~L~~~----p~~el~~l~s~   38 (337)
T 3dr3_A            5 LNTLIVGASGYAGAELVTYVNRH----PHMNITALTVS   38 (337)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHC----TTEEEEEEEEE
T ss_pred             eEEEEECCCChHHHHHHHHHHhC----CCCcEEEEEec
Confidence            68999999999999999999874    46688777644

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=91.74  E-value=0.094  Score=51.96  Aligned_cols=69  Identities=12%  Similarity=0.029  Sum_probs=52.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCC-CceEEEccCCCHHHHHHH-HccCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADH-LVEYVQCDVSDPEETQAK-LSQLTD   97 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~-~v~~~~~Dl~d~~~l~~~-~~~~~~   97 (397)
                      ..++++|+|.| .|-+|+.+++.|.+     .|++|++++.++... ..... ++.++.||.++++.+.++ +..++.
T Consensus       124 ~~~~~hviI~G-~g~~g~~la~~L~~-----~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~  195 (565)
T 4gx0_A          124 DDTRGHILIFG-IDPITRTLIRKLES-----RNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARS  195 (565)
T ss_dssp             TTCCSCEEEES-CCHHHHHHHHHTTT-----TTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSE
T ss_pred             cccCCeEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCE
Confidence            45667899999 59999999999998     799999999875421 01113 788999999999988664 344553

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=91.55  E-value=0.16  Score=46.07  Aligned_cols=58  Identities=22%  Similarity=0.161  Sum_probs=42.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ...+++|.|.| .|.||+.+++.|..     .|++|++.+|.....    .      .+..   ++.++++.+|.|+
T Consensus       141 ~l~g~~vgIIG-~G~IG~~~A~~l~~-----~G~~V~~~d~~~~~~----~------~~~~---~l~ell~~aDvV~  198 (311)
T 2cuk_A          141 DLQGLTLGLVG-MGRIGQAVAKRALA-----FGMRVVYHARTPKPL----P------YPFL---SLEELLKEADVVS  198 (311)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCSS----S------SCBC---CHHHHHHHCSEEE
T ss_pred             CCCCCEEEEEE-ECHHHHHHHHHHHH-----CCCEEEEECCCCccc----c------cccC---CHHHHHhhCCEEE
Confidence            34568999999 79999999999998     799999999875432    1      1222   3556777888633

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=91.55  E-value=0.31  Score=44.06  Aligned_cols=96  Identities=14%  Similarity=0.031  Sum_probs=62.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      +||.|+|| |.+|+.++..|+.     +|+  +|++++.+.....       ...++++. ..|      . +.++++|.
T Consensus        15 ~kV~ViGa-G~vG~~~a~~l~~-----~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d------~-~~l~~aD~   80 (303)
T 2i6t_A           15 NKITVVGG-GELGIACTLAISA-----KGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SKD------L-SASAHSKV   80 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ESC------G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eCC------H-HHHCCCCE
Confidence            68999995 9999999999987     677  8999998763110       01123333 233      2 34788887


Q ss_pred             eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961           98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  137 (397)
Q Consensus        98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  137 (397)
                      |+-.++.. .+.....+....|+.-.+.+++.+.+..+..
T Consensus        81 Vi~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a  119 (303)
T 2i6t_A           81 VIFTVNSL-GSSQSYLDVVQSNVDMFRALVPALGHYSQHS  119 (303)
T ss_dssp             EEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             EEEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            76665431 1122456777889999999999888865444

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=91.54  E-value=0.11  Score=48.35  Aligned_cols=37  Identities=16%  Similarity=0.163  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..+++|||+||+|-+|..+++.+..     .|++|+++++++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~-----~Ga~Vi~~~~~~  198 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKK-----AKCHVIGTCSSD  198 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence            4567999999999999999999887     788999999874

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=91.52  E-value=0.09  Score=47.78  Aligned_cols=35  Identities=26%  Similarity=0.221  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |.++|+|.| +|-+|+.++..|.+     .|++|++++|+.
T Consensus         1 M~mkI~IiG-aGaiG~~~a~~L~~-----~g~~V~~~~r~~   35 (312)
T 3hn2_A            1 MSLRIAIVG-AGALGLYYGALLQR-----SGEDVHFLLRRD   35 (312)
T ss_dssp             ---CEEEEC-CSTTHHHHHHHHHH-----TSCCEEEECSTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHH-----CCCeEEEEEcCc
Confidence            457899999 69999999999998     789999999975

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=91.48  E-value=0.13  Score=47.39  Aligned_cols=41  Identities=17%  Similarity=0.280  Sum_probs=34.6

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      ....+++|||+||+|-+|..+++.+..     .|.+|+++++++.+
T Consensus       141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~~  181 (340)
T 3gms_A          141 NLQRNDVLLVNACGSAIGHLFAQLSQI-----LNFRLIAVTRNNKH  181 (340)
T ss_dssp             CCCTTCEEEESSTTSHHHHHHHHHHHH-----HTCEEEEEESSSTT
T ss_pred             ccCCCCEEEEeCCccHHHHHHHHHHHH-----cCCEEEEEeCCHHH
Confidence            345568999999999999999988877     78899999987643

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=91.48  E-value=0.13  Score=47.18  Aligned_cols=38  Identities=21%  Similarity=0.204  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ...+++|||+||+|-+|...++.+..     .|.+|+++++++
T Consensus       146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~  183 (334)
T 3qwb_A          146 VKKGDYVLLFAAAGGVGLILNQLLKM-----KGAHTIAVASTD  183 (334)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence            44568999999999999999998887     789999999864

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=91.44  E-value=0.31  Score=43.26  Aligned_cols=53  Identities=19%  Similarity=0.132  Sum_probs=42.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+++++|.|++|.+|+.++..|++     .|..|+.+.|..                    .++.+.++.+|.|+..
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~-----~gAtVtv~h~~t--------------------~~L~~~~~~ADIVI~A  210 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLN-----AGATVSVCHIKT--------------------KDLSLYTRQADLIIVA  210 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTTC--------------------SCHHHHHTTCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHHhhcCCEEEEC
Confidence            4578999999999999999999998     788999887642                    1255778888866654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=91.41  E-value=0.13  Score=46.45  Aligned_cols=34  Identities=26%  Similarity=0.351  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +++|.|.| .|.+|+.++..|.+     .|++|++++|++
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~-----~g~~V~~~~r~~   36 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQ-----GGNDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHh-----CCCcEEEEECCH
Confidence            36899999 59999999999998     799999999975

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=91.30  E-value=0.16  Score=45.35  Aligned_cols=34  Identities=24%  Similarity=0.288  Sum_probs=30.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|.|.|+ |.+|+.++..|.+     .|++|++++|++.
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~-----~g~~V~~~~r~~~   34 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCK-----QGHEVQGWLRVPQ   34 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSSCC
T ss_pred             CeEEEECc-CHHHHHHHHHHHh-----CCCCEEEEEcCcc
Confidence            37999995 9999999999998     7999999999764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=91.28  E-value=0.12  Score=47.15  Aligned_cols=39  Identities=18%  Similarity=0.152  Sum_probs=33.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|||+||+|-+|..+++.+..     .|.+|+++++++.
T Consensus       138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~  176 (325)
T 3jyn_A          138 VKPGEIILFHAAAGGVGSLACQWAKA-----LGAKLIGTVSSPE  176 (325)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHH-----HTCEEEEEESSHH
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEeCCHH
Confidence            44568999999999999999998887     7889999998653

>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}

Probab=91.26  E-value=0.29  Score=45.38  Aligned_cols=63  Identities=17%  Similarity=-0.035  Sum_probs=45.5

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      +|||+| +|.+|..+++.|.+     .|++|++++..+......... . +..|..|.+.+.+...++|.|
T Consensus         1 ~iliiG-~g~~g~~~~~a~~~-----~G~~v~~~~~~~~~~~~~~a~-~-~~~~~~d~~~l~~~~~~~d~v   63 (369)
T 3aw8_A            1 MIGILG-GGQLGRMLALAGYP-----LGLSFRFLDPSPEACAGQVGE-L-VVGEFLDEGALLRFAEGLALV   63 (369)
T ss_dssp             CEEEEC-CSHHHHHHHHHHTT-----BTCCEEEEESCTTCGGGGTSE-E-EECCTTCHHHHHHHHTTCSEE
T ss_pred             CEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEeCCCCChHHHhhc-e-EecCCCCHHHHHHHHhCCCEE
Confidence            589999 58999999999988     799999888654321101011 2 568889999888877666643

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=91.25  E-value=0.14  Score=46.41  Aligned_cols=96  Identities=18%  Similarity=0.004  Sum_probs=57.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC--C---------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN--W---------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~--~---------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ++|.|+| +|.+|+.++..|.+     .|  ++|++++|++...  .         .....+.....|   .    +.++
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~-----~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~   68 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIA-----QGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALA   68 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhC
Confidence            5899999 79999999999987     67  7999999975321  0         000122332222   2    3467


Q ss_pred             cCCCeeEEEEeccc----CCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961           94 QLTDVTHIFYVTWT----NRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus        94 ~~~~V~h~a~~~~~----~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                      ++|.|+-++.....    +.....+....|+.-.+.+++.+.+..+
T Consensus        69 ~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~  114 (309)
T 1hyh_A           69 DADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF  114 (309)
T ss_dssp             TCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            77765554321111    1112344567788888888888876543

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=91.23  E-value=0.088  Score=49.01  Aligned_cols=33  Identities=15%  Similarity=0.189  Sum_probs=25.4

Q ss_pred             CEEEEEcCCChhHHHHHH-HccCCCCCCCC---cEEEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAE-ILPLPDTPGGP---WKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~-~L~~~~~~~~g---~~V~~l~R~   64 (397)
                      ++|.|.||||++|+.|++ .|.+     .+   .+|+.+..+
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~-----~~~~~v~i~~~~~~   38 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEE-----RDFDAIRPVFFSTS   38 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT-----TGGGGSEEEEEESS
T ss_pred             cEEEEECCCCHHHHHHHHHHHhc-----CCCCeEEEEEEEeC
Confidence            589999999999999999 5554     33   256777654

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=91.20  E-value=0.23  Score=47.26  Aligned_cols=67  Identities=13%  Similarity=0.045  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCe
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V   98 (397)
                      +.++|||+|+ |.+|..+++.+.+     .|++|++++..+...... -.-+.+..|..|.+.+.+.++  ++|.|
T Consensus        18 ~~~~ili~g~-g~~g~~~~~a~~~-----~G~~v~~v~~~~~~~~~~-~ad~~~~~~~~d~~~l~~~~~~~~~d~V   86 (433)
T 2dwc_A           18 SAQKILLLGS-GELGKEIAIEAQR-----LGVEVVAVDRYANAPAMQ-VAHRSYVGNMMDKDFLWSVVEREKPDAI   86 (433)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHH-----TTCEEEEEESSTTCHHHH-HSSEEEESCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEECCCCChhhh-hcceEEECCCCCHHHHHHHHHHcCCCEE
Confidence            4579999996 8999999999998     899999998765331000 011356788889888877765  45543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=91.19  E-value=0.15  Score=47.32  Aligned_cols=41  Identities=15%  Similarity=0.079  Sum_probs=31.7

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++-+..+++|.|.| .|.+|..++..|.+     .|++|++.+|++.
T Consensus        16 ~~~Mm~~mkIgiIG-lG~mG~~~A~~L~~-----~G~~V~v~dr~~~   56 (358)
T 4e21_A           16 ENLYFQSMQIGMIG-LGRMGADMVRRLRK-----GGHECVVYDLNVN   56 (358)
T ss_dssp             ------CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             chhhhcCCEEEEEC-chHHHHHHHHHHHh-----CCCEEEEEeCCHH
Confidence            33333357899999 89999999999998     7999999999754

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=91.15  E-value=0.17  Score=42.95  Aligned_cols=34  Identities=15%  Similarity=0.212  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .++|.|.| +|.+|+.++..|.+     .|++|++.+|++
T Consensus        19 ~~~I~iiG-~G~mG~~la~~l~~-----~g~~V~~~~~~~   52 (209)
T 2raf_A           19 GMEITIFG-KGNMGQAIGHNFEI-----AGHEVTYYGSKD   52 (209)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECTTC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEcCCH
Confidence            46899999 79999999999998     799999998864

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=91.13  E-value=0.12  Score=47.54  Aligned_cols=63  Identities=13%  Similarity=-0.054  Sum_probs=44.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ...+++|.|.| .|-||+.+++.|..     .|++|++.+|.+...... .++++  .     +++.++++.+|.|+
T Consensus       170 ~l~gktvGIIG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~~~~-~g~~~--~-----~~l~ell~~sDvV~  232 (345)
T 4g2n_A          170 GLTGRRLGIFG-MGRIGRAIATRARG-----FGLAIHYHNRTRLSHALE-EGAIY--H-----DTLDSLLGASDIFL  232 (345)
T ss_dssp             CCTTCEEEEES-CSHHHHHHHHHHHT-----TTCEEEEECSSCCCHHHH-TTCEE--C-----SSHHHHHHTCSEEE
T ss_pred             ccCCCEEEEEE-eChhHHHHHHHHHH-----CCCEEEEECCCCcchhhh-cCCeE--e-----CCHHHHHhhCCEEE
Confidence            34578999999 79999999999998     899999999975321100 12222  1     24667788888633

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=91.02  E-value=0.16  Score=46.68  Aligned_cols=37  Identities=24%  Similarity=0.271  Sum_probs=31.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +.|..+|.|.| +|.+|+.++..|.+     .|++|++.+|++
T Consensus        11 ~~~~~kI~iIG-~G~mG~ala~~L~~-----~G~~V~~~~r~~   47 (335)
T 1z82_A           11 HHMEMRFFVLG-AGSWGTVFAQMLHE-----NGEEVILWARRK   47 (335)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred             cccCCcEEEEC-cCHHHHHHHHHHHh-----CCCeEEEEeCCH
Confidence            45888999999 79999999999998     799999999974

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=90.95  E-value=0.18  Score=46.21  Aligned_cols=60  Identities=20%  Similarity=0.125  Sum_probs=43.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ...+++|.|.| .|.||+.+++.|..     .|++|++.+|++...    .++.. .      .++.++++.+|.|+
T Consensus       161 ~l~g~~vgIIG-~G~iG~~vA~~l~~-----~G~~V~~~dr~~~~~----~g~~~-~------~~l~ell~~aDvVi  220 (333)
T 3ba1_A          161 KFSGKRVGIIG-LGRIGLAVAERAEA-----FDCPISYFSRSKKPN----TNYTY-Y------GSVVELASNSDILV  220 (333)
T ss_dssp             CCTTCCEEEEC-CSHHHHHHHHHHHT-----TTCCEEEECSSCCTT----CCSEE-E------SCHHHHHHTCSEEE
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCCchhc----cCcee-c------CCHHHHHhcCCEEE
Confidence            34567899999 69999999999998     799999999876432    12221 1      12456778888633

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=90.89  E-value=0.17  Score=45.73  Aligned_cols=36  Identities=22%  Similarity=0.220  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      |.++|.|.| .|.+|+.++..|.+     .|++|++.+|++.
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~-----~G~~V~~~dr~~~   41 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLR-----AGLSTWGADLNPQ   41 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEECCHH
Confidence            446899998 79999999999998     8999999999753

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=90.89  E-value=0.16  Score=46.73  Aligned_cols=60  Identities=22%  Similarity=0.360  Sum_probs=43.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ..+++|.|.| .|-||+.+++.|..     .|++|++.+|.+....  ...+.+.        ++.++++.+|.|+
T Consensus       146 l~gktvgIiG-lG~IG~~vA~~l~~-----~G~~V~~~d~~~~~~~--~~~~~~~--------~l~ell~~aDvV~  205 (343)
T 2yq5_A          146 IYNLTVGLIG-VGHIGSAVAEIFSA-----MGAKVIAYDVAYNPEF--EPFLTYT--------DFDTVLKEADIVS  205 (343)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCGGG--TTTCEEC--------CHHHHHHHCSEEE
T ss_pred             cCCCeEEEEe-cCHHHHHHHHHHhh-----CCCEEEEECCChhhhh--hcccccc--------CHHHHHhcCCEEE
Confidence            3568999999 79999999999998     7999999999764321  1122221        3566788888633

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=90.77  E-value=0.29  Score=44.23  Aligned_cols=59  Identities=19%  Similarity=0.211  Sum_probs=42.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ...+++|.|.| .|.||+.+++.|..     .|++|++.+|.+. .    .+.       ....++.++++.+|.|+
T Consensus       121 ~l~g~~vgIIG-~G~IG~~~A~~l~~-----~G~~V~~~dr~~~-~----~~~-------~~~~~l~ell~~aDvV~  179 (303)
T 1qp8_A          121 LIQGEKVAVLG-LGEIGTRVGKILAA-----LGAQVRGFSRTPK-E----GPW-------RFTNSLEEALREARAAV  179 (303)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHH-----TTCEEEEECSSCC-C----SSS-------CCBSCSHHHHTTCSEEE
T ss_pred             CCCCCEEEEEc-cCHHHHHHHHHHHH-----CCCEEEEECCCcc-c----cCc-------ccCCCHHHHHhhCCEEE
Confidence            34678999999 79999999999998     7999999998754 1    111       11123456788888633

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=90.68  E-value=0.086  Score=47.47  Aligned_cols=35  Identities=23%  Similarity=0.249  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |.++|+|.| +|-+|+.++..|.+     .|++|++++|++
T Consensus         1 M~mkI~iiG-aGa~G~~~a~~L~~-----~g~~V~~~~r~~   35 (294)
T 3g17_A            1 MSLSVAIIG-PGAVGTTIAYELQQ-----SLPHTTLIGRHA   35 (294)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHH-----HCTTCEEEESSC
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEEecc
Confidence            557899999 69999999999998     788999999974

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=90.60  E-value=0.17  Score=45.49  Aligned_cols=36  Identities=19%  Similarity=0.341  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      |.++|.|.| +|.+|+.++..|.+     .|++|++++|++.
T Consensus         4 M~m~i~iiG-~G~~G~~~a~~l~~-----~g~~V~~~~~~~~   39 (299)
T 1vpd_A            4 MTMKVGFIG-LGIMGKPMSKNLLK-----AGYSLVVSDRNPE   39 (299)
T ss_dssp             --CEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             ccceEEEEC-chHHHHHHHHHHHh-----CCCEEEEEeCCHH
Confidence            456899999 79999999999998     7899999998753

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=90.58  E-value=0.15  Score=46.25  Aligned_cols=35  Identities=17%  Similarity=0.159  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      .++|.|.| +|.+|+.++..|.+     .|++|++.+|++.
T Consensus        30 ~~~I~iIG-~G~mG~~~a~~l~~-----~g~~V~~~~~~~~   64 (316)
T 2uyy_A           30 DKKIGFLG-LGLMGSGIVSNLLK-----MGHTVTVWNRTAE   64 (316)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSGG
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHh-----CCCEEEEEeCCHH
Confidence            36899999 69999999999998     7899999998754

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=90.50  E-value=0.17  Score=46.45  Aligned_cols=35  Identities=26%  Similarity=0.320  Sum_probs=27.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      .+|.|.||||.+|+.|++.|.+.+.  ..++|+++..
T Consensus         4 ~kV~I~GAtG~iG~~llr~L~~~~~--p~~elv~i~s   38 (336)
T 2r00_A            4 FNVAIFGATGAVGETMLEVLQEREF--PVDELFLLAS   38 (336)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTC--CEEEEEEEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHhcCCC--CCEEEEEEEC
Confidence            6899999999999999999987310  1357777773

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=90.44  E-value=0.32  Score=45.28  Aligned_cols=36  Identities=19%  Similarity=0.133  Sum_probs=26.1

Q ss_pred             CCEEEEEcCCChhHHHHHH-HccCCCCCCCCcEEEEEeC
Q 015961           26 QSVALIVGVTGIVGNSLAE-ILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~-~L~~~~~~~~g~~V~~l~R   63 (397)
                      +.+|.|.||||++|..|++ .|.+++..  ..++..++-
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~--~~~l~~~ss   40 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFD--LIEPVFFST   40 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGG--GSEEEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCC--ceEEEEEec
Confidence            3689999999999999999 66663210  236666654

>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*

Probab=90.43  E-value=0.34  Score=47.20  Aligned_cols=40  Identities=23%  Similarity=0.321  Sum_probs=33.1

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +|.+..+++|+|.| +||-|..+++.|.+     .+++|+++++++
T Consensus        36 ~p~~~~KprVVIIG-gG~AGl~~A~~L~~-----~~~~VtLId~~~   75 (502)
T 4g6h_A           36 DPQHSDKPNVLILG-SGWGAISFLKHIDT-----KKYNVSIISPRS   75 (502)
T ss_dssp             CCCSCSSCEEEEEC-SSHHHHHHHHHSCT-----TTCEEEEEESSS
T ss_pred             CCCCCCCCCEEEEC-CcHHHHHHHHHhhh-----CCCcEEEECCCC
Confidence            34444456899999 59999999999987     789999999864

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=90.37  E-value=0.5  Score=45.40  Aligned_cols=67  Identities=22%  Similarity=0.178  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHH-HHccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQA-KLSQLTD   97 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~-~~~~~~~   97 (397)
                      ..-++|+|.| .|-+|.+|++.|.+      +++|..+.++.....   ...++..++.||-+|++-|.+ -+..+|.
T Consensus       233 ~~~~~v~I~G-gG~ig~~lA~~L~~------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~  303 (461)
T 4g65_A          233 KPYRRIMIVG-GGNIGASLAKRLEQ------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDV  303 (461)
T ss_dssp             SCCCEEEEEC-CSHHHHHHHHHHTT------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSE
T ss_pred             ccccEEEEEc-chHHHHHHHHHhhh------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcE
Confidence            3447899999 59999999999864      678999988654210   012577899999999987765 3455654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=90.36  E-value=0.17  Score=44.98  Aligned_cols=35  Identities=17%  Similarity=0.064  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++|+|+|+ |-+|+.++..|++     .|.+|++++|+.
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~-----~G~~v~v~~R~~  152 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQ-----AQQNIVLANRTF  152 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence            4579999997 8899999999998     788999999975

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=90.32  E-value=0.31  Score=43.60  Aligned_cols=34  Identities=18%  Similarity=0.116  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++++|||| |-+|+.++..|++     .| +|++.+|+.
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~-----~G-~V~v~~r~~  160 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAK-----DN-NIIIANRTV  160 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTS-----SS-EEEEECSSH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHH-----CC-CEEEEECCH
Confidence            4579999997 5999999999998     78 999998864

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=90.30  E-value=0.2  Score=45.55  Aligned_cols=96  Identities=13%  Similarity=0.054  Sum_probs=60.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----C--CC----CCCceEEEccCCCHHHHHHHHcc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----W--NA----DHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----~--~~----~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      ++|.|+|| |.+|+.++..|.+     .|+  +|++++|++...    .  ..    .....+...  .+.    +.+.+
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~-----~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~   75 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQ-----RGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRD   75 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCC
Confidence            58999997 9999999999988     788  999999874211    0  00    001222211  122    23567


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  134 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  134 (397)
                      +|.|+-++...........+....|+...+.+++.+.+..
T Consensus        76 aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~  115 (319)
T 1lld_A           76 ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA  115 (319)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            7765555322111223456677888888888888877653

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=90.26  E-value=0.45  Score=42.24  Aligned_cols=53  Identities=28%  Similarity=0.303  Sum_probs=42.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+++++|.|++|.+|+.++..|+.     .|..|+.+.++..                    ++.+.++.+|.|+..
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~-----~gAtVtv~hs~T~--------------------~L~~~~~~ADIVI~A  211 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLL-----GGCTVTVTHRFTR--------------------DLADHVSRADLVVVA  211 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHH-----TTCEEEEECTTCS--------------------CHHHHHHTCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCCCc--------------------CHHHHhccCCEEEEC
Confidence            4578999999999999999999998     7889998876421                    255778888876665

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=90.25  E-value=0.31  Score=45.25  Aligned_cols=35  Identities=20%  Similarity=0.175  Sum_probs=25.2

Q ss_pred             CEEEEEcCCChhHHHHHH-HccCCCCCCCCcEEEEEeC
Q 015961           27 SVALIVGVTGIVGNSLAE-ILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~-~L~~~~~~~~g~~V~~l~R   63 (397)
                      ++|.|.||||++|..|++ .|.+++..  ..++..++-
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~--~~~l~~~ss   36 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFD--LIEPVFFST   36 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGG--GSEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCC--ceEEEEEec
Confidence            379999999999999999 76663210  236666653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=90.23  E-value=0.21  Score=46.03  Aligned_cols=38  Identities=24%  Similarity=0.241  Sum_probs=33.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~   65 (397)
                      ...+++|||+||+|-+|..+++.+..     . |.+|+++++++
T Consensus       168 ~~~g~~vlV~Gagg~iG~~~~~~a~~-----~~Ga~Vi~~~~~~  206 (347)
T 1jvb_A          168 LDPTKTLLVVGAGGGLGTMAVQIAKA-----VSGATIIGVDVRE  206 (347)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----HTCCEEEEEESSH
T ss_pred             CCCCCEEEEECCCccHHHHHHHHHHH-----cCCCeEEEEcCCH
Confidence            34568999999999999999999887     7 89999999865

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=90.17  E-value=0.2  Score=43.93  Aligned_cols=34  Identities=24%  Similarity=0.213  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      +++|+|.| .|-+|+.+++.|.+     .|. +|++++++.
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~-----~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLAS-----AGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHH-----HTCSEEEEECCCB
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHH-----cCCCeEEEEcCCC
Confidence            47899999 58999999999998     676 799999875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=90.09  E-value=0.059  Score=50.23  Aligned_cols=70  Identities=19%  Similarity=0.100  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCC-CCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      .+++|||+|+ |-||..+++.+..     .|.+|+++++++... ... .-+... ..|..+.+.+.+...++|.|+.+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~-----~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~  258 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKA-----FGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDT  258 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEEC
Confidence            5679999996 9999999998887     788999999875431 000 112222 24666666665555555655554

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=90.04  E-value=0.49  Score=42.00  Aligned_cols=53  Identities=15%  Similarity=0.220  Sum_probs=42.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+++++|.|++|.+|+.++..|+.     .|..|+.+.|..                    .++.+.+..+|.|+..
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~hs~t--------------------~~L~~~~~~ADIVI~A  211 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLN-----AKATVTTCHRFT--------------------TDLKSHTTKADILIVA  211 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTTC--------------------SSHHHHHTTCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHhcccCCEEEEC
Confidence            4578999999999999999999998     788998887642                    1256778888876665

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=89.91  E-value=0.083  Score=45.36  Aligned_cols=34  Identities=26%  Similarity=0.403  Sum_probs=30.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEE-EeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~-l~R~~~   66 (397)
                      ++|.|.| +|.+|+.++..|.+     .|++|++ .+|++.
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~-----~g~~V~~v~~r~~~   58 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTA-----AQIPAIIANSRGPA   58 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHH-----TTCCEEEECTTCGG
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEECCCHH
Confidence            6899999 89999999999998     7999998 777654

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=89.90  E-value=0.19  Score=44.97  Aligned_cols=35  Identities=26%  Similarity=0.292  Sum_probs=31.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      ++|.|.| +|.+|+.++..|.+     .|++|++.+|++..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~-----~G~~V~~~dr~~~~   36 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVK-----AGCSVTIWNRSPEK   36 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSGGG
T ss_pred             CEEEEEe-ecHHHHHHHHHHHH-----CCCeEEEEcCCHHH
Confidence            5899999 79999999999998     79999999997643

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=89.87  E-value=0.27  Score=45.66  Aligned_cols=32  Identities=25%  Similarity=0.287  Sum_probs=29.6

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +|.|.| +|.+|+.++..|.+     .|++|++++|++
T Consensus        17 kI~iIG-~G~mG~~la~~L~~-----~G~~V~~~~r~~   48 (366)
T 1evy_A           17 KAVVFG-SGAFGTALAMVLSK-----KCREVCVWHMNE   48 (366)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT-----TEEEEEEECSCH
T ss_pred             eEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence            899999 59999999999998     799999999974

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=89.75  E-value=0.31  Score=45.50  Aligned_cols=31  Identities=23%  Similarity=0.378  Sum_probs=25.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV   61 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l   61 (397)
                      .+|.|.||||++|..|++.|.+.|    ..+|..+
T Consensus        20 ~kVaIvGAtG~vG~ell~lL~~hp----~~el~~l   50 (381)
T 3hsk_A           20 KKAGVLGATGSVGQRFILLLSKHP----EFEIHAL   50 (381)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCS----SEEEEEE
T ss_pred             cEEEEECCCChHHHHHHHHHHcCC----CceEEEe
Confidence            489999999999999999998742    3477655

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=89.61  E-value=0.22  Score=48.18  Aligned_cols=36  Identities=22%  Similarity=0.228  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~   65 (397)
                      .|.++|.|.| +|++|..++..|.+     .  |++|++++|++
T Consensus         7 ~~~mkI~VIG-~G~vG~~~A~~La~-----~g~g~~V~~~D~~~   44 (481)
T 2o3j_A            7 GKVSKVVCVG-AGYVGGPTCAMIAH-----KCPHITVTVVDMNT   44 (481)
T ss_dssp             CCCCEEEEEC-CSTTHHHHHHHHHH-----HCTTSEEEEECSCH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHh-----cCCCCEEEEEECCH
Confidence            3446899999 79999999999987     5  79999999875

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=89.58  E-value=0.25  Score=44.94  Aligned_cols=63  Identities=21%  Similarity=0.154  Sum_probs=42.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      +.++|.|.| .|.+|..++..|.+     .|++|++.+|++.... ....++..       ..++.++++++|.|+-
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~-----~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~e~~~~aDvVi~   93 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCE-----AGYALQVWNRTPARAASLAALGATI-------HEQARAAARDADIVVS   93 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHTTTCEE-------ESSHHHHHTTCSEEEE
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHh-----CCCeEEEEcCCHHHHHHHHHCCCEe-------eCCHHHHHhcCCEEEE
Confidence            346899998 69999999999998     7999999999754210 00113222       1234566777875444

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=89.45  E-value=0.53  Score=41.65  Aligned_cols=54  Identities=17%  Similarity=0.054  Sum_probs=42.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      +..+++++|.|++..+|+.++..|++     .  |..|+...|..                    .++.+.+..+|.|+.
T Consensus       155 ~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~~atVtv~h~~t--------------------~~L~~~~~~ADIVI~  209 (281)
T 2c2x_A          155 SIAGAHVVVIGRGVTVGRPLGLLLTR-----RSENATVTLCHTGT--------------------RDLPALTRQADIVVA  209 (281)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHTS-----TTTCCEEEEECTTC--------------------SCHHHHHTTCSEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHhc-----CCCCCEEEEEECch--------------------hHHHHHHhhCCEEEE
Confidence            34568999999988999999999998     6  78899886653                    235677888886665


Q ss_pred             E
Q 015961          101 I  101 (397)
Q Consensus       101 ~  101 (397)
                      .
T Consensus       210 A  210 (281)
T 2c2x_A          210 A  210 (281)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=89.43  E-value=0.27  Score=45.53  Aligned_cols=34  Identities=26%  Similarity=0.219  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .++|.|.| +|.+|+.++..|.+     .|++|++.+|++
T Consensus        29 ~mkI~VIG-aG~mG~alA~~La~-----~G~~V~l~~r~~   62 (356)
T 3k96_A           29 KHPIAILG-AGSWGTALALVLAR-----KGQKVRLWSYES   62 (356)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHT-----TTCCEEEECSCH
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHH-----CCCeEEEEeCCH
Confidence            46899999 59999999999998     799999999974

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=89.43  E-value=0.31  Score=38.38  Aligned_cols=37  Identities=19%  Similarity=0.120  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCC---ChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVT---GIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGat---GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ...++|.|.|+|   |.+|..+++.|++     .|++|+.++++.
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~-----~G~~V~~vnp~~   51 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLS-----KGFEVLPVNPNY   51 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHH-----TTCEEEEECTTC
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHH-----CCCEEEEeCCCC
Confidence            345799999987   9999999999998     799988887753

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=89.33  E-value=0.13  Score=47.69  Aligned_cols=63  Identities=17%  Similarity=0.026  Sum_probs=43.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      ...+++|.|.| .|-||+.+++.|..     .|++|++.+|..........++..        .++.++++.+|.|+
T Consensus       173 ~l~gktvGIIG-lG~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~--------~~l~ell~~aDvV~  235 (365)
T 4hy3_A          173 LIAGSEIGIVG-FGDLGKALRRVLSG-----FRARIRVFDPWLPRSMLEENGVEP--------ASLEDVLTKSDFIF  235 (365)
T ss_dssp             CSSSSEEEEEC-CSHHHHHHHHHHTT-----SCCEEEEECSSSCHHHHHHTTCEE--------CCHHHHHHSCSEEE
T ss_pred             ccCCCEEEEec-CCcccHHHHHhhhh-----CCCEEEEECCCCCHHHHhhcCeee--------CCHHHHHhcCCEEE
Confidence            34578999999 89999999999988     799999999874321100122321        23567788888633

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=89.31  E-value=0.21  Score=43.60  Aligned_cols=36  Identities=8%  Similarity=0.037  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc----EEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW----KVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~----~V~~l~R~~~   66 (397)
                      |.++|.|.| +|.+|+.+++.|.+     .|+    +|++.+|++.
T Consensus         1 M~~~i~iIG-~G~mG~~~a~~l~~-----~g~~~~~~V~~~~r~~~   40 (247)
T 3gt0_A            1 MDKQIGFIG-CGNMGMAMIGGMIN-----KNIVSSNQIICSDLNTA   40 (247)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHH-----TTSSCGGGEEEECSCHH
T ss_pred             CCCeEEEEC-ccHHHHHHHHHHHh-----CCCCCCCeEEEEeCCHH
Confidence            456899999 89999999999998     787    8999999754

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=89.22  E-value=0.27  Score=45.34  Aligned_cols=33  Identities=21%  Similarity=0.220  Sum_probs=29.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ++|.|.| +|.+|+.++..|.+     .|++|++++|++
T Consensus         5 mki~iiG-~G~~G~~~a~~L~~-----~g~~V~~~~r~~   37 (359)
T 1bg6_A            5 KTYAVLG-LGNGGHAFAAYLAL-----KGQSVLAWDIDA   37 (359)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEeCCH
Confidence            5899999 59999999999998     799999999975

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=89.21  E-value=0.41  Score=42.54  Aligned_cols=53  Identities=15%  Similarity=0.200  Sum_probs=42.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ..+++++|.|+++.+|+.++..|+.     .|..|+.+.+..                    .++.+.++.+|.|+..
T Consensus       157 l~gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~hs~t--------------------~~L~~~~~~ADIVI~A  209 (288)
T 1b0a_A          157 TFGLNAVVIGASNIVGRPMSMELLL-----AGCTTTVTHRFT--------------------KNLRHHVENADLLIVA  209 (288)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHT-----TTCEEEEECSSC--------------------SCHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHHhccCCEEEEC
Confidence            4568999999999999999999998     788999887543                    1256677888866554

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=89.12  E-value=0.27  Score=47.07  Aligned_cols=40  Identities=18%  Similarity=0.180  Sum_probs=33.9

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .....+++|||+||+|-||...++.+..     .|.+|+++++++
T Consensus       216 ~~~~~g~~VlV~GasG~iG~~a~qla~~-----~Ga~vi~~~~~~  255 (447)
T 4a0s_A          216 AQMKQGDIVLIWGASGGLGSYAIQFVKN-----GGGIPVAVVSSA  255 (447)
T ss_dssp             TCCCTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCH
Confidence            3455678999999999999999988887     799999998754

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=88.81  E-value=0.33  Score=44.10  Aligned_cols=36  Identities=36%  Similarity=0.600  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~   66 (397)
                      |.++|.|.| .|.+|..++..|.+     .|+  +|++.+|++.
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~-----~G~~~~V~~~dr~~~   69 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRR-----SGFKGKIYGYDINPE   69 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHH-----TTCCSEEEEECSCHH
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHh-----CCCCCEEEEEECCHH
Confidence            347999999 89999999999998     788  9999999753

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=88.80  E-value=0.37  Score=42.63  Aligned_cols=36  Identities=28%  Similarity=0.230  Sum_probs=31.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      +++|+|+|+ |-.|+.++..|.+     .|.+|++++|...+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~-----~G~~v~V~nRt~~k  153 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKK-----QGLQVSVLNRSSRG  153 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSSCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeCCHHH
Confidence            689999995 9999999999998     67889999998644

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=88.78  E-value=0.49  Score=42.16  Aligned_cols=35  Identities=14%  Similarity=0.062  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      .+++|+|+|+ |-+|+.++..|.+     .|. +|++++|+.
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~-----~G~~~v~v~~R~~  160 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLD-----QQPASITVTNRTF  160 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHT-----TCCSEEEEEESSH
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHh-----cCCCeEEEEECCH
Confidence            4689999996 8899999999998     786 899999964

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=88.76  E-value=0.26  Score=44.57  Aligned_cols=36  Identities=22%  Similarity=0.319  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +.++|.|.| .|.+|+.+++.|++     .|++|++.+|++.
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~-----~G~~V~~~dr~~~   43 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLK-----QGKRVAIWNRSPG   43 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCHH
Confidence            446899998 79999999999998     7999999999754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=88.68  E-value=0.36  Score=44.33  Aligned_cols=37  Identities=24%  Similarity=0.219  Sum_probs=31.4

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ....+++|||+||+|-+|..+++.+..     .|.+|+++ ++
T Consensus       147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~-----~Ga~Vi~~-~~  183 (343)
T 3gaz_A          147 QVQDGQTVLIQGGGGGVGHVAIQIALA-----RGARVFAT-AR  183 (343)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEE-EC
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEE-eC
Confidence            344578999999999999999998887     78999988 54

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=88.59  E-value=0.2  Score=47.22  Aligned_cols=59  Identities=15%  Similarity=0.064  Sum_probs=42.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ...+|+|.|.| .|.||+.+++.|..     .|++|++.+|.+....   ....  .     ..+++++++.+|.
T Consensus       153 el~gktvGIIG-lG~IG~~vA~~l~~-----~G~~V~~yd~~~~~~~---~~~~--~-----~~sl~ell~~aDv  211 (416)
T 3k5p_A          153 EVRGKTLGIVG-YGNIGSQVGNLAES-----LGMTVRYYDTSDKLQY---GNVK--P-----AASLDELLKTSDV  211 (416)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECTTCCCCB---TTBE--E-----CSSHHHHHHHCSE
T ss_pred             cCCCCEEEEEe-eCHHHHHHHHHHHH-----CCCEEEEECCcchhcc---cCcE--e-----cCCHHHHHhhCCE
Confidence            34578999999 89999999999988     7999999998643221   1111  1     1235667777886

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=88.59  E-value=0.26  Score=45.81  Aligned_cols=35  Identities=23%  Similarity=0.296  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++|||+|| |-+|..+++.+..     .|.+|+++++++
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~-----~Ga~Vi~~~~~~  214 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRT-----YGLEVWMANRRE  214 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHH-----HTCEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEEeCCc
Confidence            3789999999 9999999998887     788999999875

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=88.58  E-value=0.3  Score=43.81  Aligned_cols=35  Identities=20%  Similarity=0.166  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +++|.|.| +|.+|+.++..|.+     .|++|++.+|++.
T Consensus         4 ~~~i~iiG-~G~~G~~~a~~l~~-----~g~~V~~~~~~~~   38 (301)
T 3cky_A            4 SIKIGFIG-LGAMGKPMAINLLK-----EGVTVYAFDLMEA   38 (301)
T ss_dssp             CCEEEEEC-CCTTHHHHHHHHHH-----TTCEEEEECSSHH
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHH-----CCCeEEEEeCCHH
Confidence            36899999 79999999999998     7899999998753

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=88.50  E-value=0.34  Score=44.54  Aligned_cols=36  Identities=25%  Similarity=0.199  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++|||+||+|-+|...++.+..     .|.+|+++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~-----~Ga~Vi~~~~~~  185 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKA-----YGLRVITTASRN  185 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEECCSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHH-----cCCEEEEEeCCH
Confidence            568999999999999999998887     788999999864

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=88.42  E-value=0.22  Score=47.01  Aligned_cols=59  Identities=17%  Similarity=0.040  Sum_probs=42.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ...+|++.|.| .|.||+.+++.|..     .|++|++.+|......   .+++  ..     .++.++++.+|.
T Consensus       142 el~gktlGiIG-lG~IG~~vA~~l~~-----~G~~V~~~d~~~~~~~---~~~~--~~-----~~l~ell~~aDv  200 (404)
T 1sc6_A          142 EARGKKLGIIG-YGHIGTQLGILAES-----LGMYVYFYDIENKLPL---GNAT--QV-----QHLSDLLNMSDV  200 (404)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCCCC---TTCE--EC-----SCHHHHHHHCSE
T ss_pred             ccCCCEEEEEe-ECHHHHHHHHHHHH-----CCCEEEEEcCCchhcc---CCce--ec-----CCHHHHHhcCCE
Confidence            34578999999 89999999999998     7999999998653321   1122  11     235667888886

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=88.41  E-value=0.48  Score=42.59  Aligned_cols=35  Identities=14%  Similarity=0.026  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      .+++|+|+|+ |-+|+.++..|.+     .|+ +|++++|..
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~-----~G~~~V~v~nR~~  175 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLS-----TAAERIDMANRTV  175 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHT-----TTCSEEEEECSSH
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHH-----CCCCEEEEEeCCH
Confidence            4579999996 8899999999998     787 899999974

>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A

Probab=88.41  E-value=0.32  Score=44.69  Aligned_cols=34  Identities=21%  Similarity=0.417  Sum_probs=29.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      |+|.|.|+||.||...++-+.+.|   ..++|++++=
T Consensus        22 k~i~ILGSTGSIGtqtLdVi~~~p---d~f~V~aLaa   55 (398)
T 2y1e_A           22 LRVVVLGSTGSIGTQALQVIADNP---DRFEVVGLAA   55 (398)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCT---TTEEEEEEEE
T ss_pred             eEEEEEccCcHHHHHHHHHHHhCC---CceEEEEEEe
Confidence            789999999999999888887643   4789999986

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=88.31  E-value=0.39  Score=42.85  Aligned_cols=36  Identities=25%  Similarity=0.163  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      ..+++++|+|| |-+|+.++..|.+     .|. +|++++|+.
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~-----~G~~~v~i~~R~~  161 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVT-----HGVQKLQVADLDT  161 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHH-----TTCSEEEEECSSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEECCH
Confidence            34689999996 8999999999998     787 699999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	397
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-07
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.002

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 48.3 bits (114), Expect = 8e-07
 Identities = 52/294 (17%), Positives = 88/294 (29%), Gaps = 43/294 (14%)

Query: 28  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP--KPNWNADHL----------V 75
           VALI GVTG  G+ LAE L         ++V+G+ RR         DH+           
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKG-----YEVHGIKRRASSFNTERVDHIYQDPHTCNPKF 57

Query: 76  EYVQCDVSDPEETQAKLS--QLTDVTHIFYVTWTNRSTE--AENCKINGSMFRNVLRAVI 131
                D+SD       L   Q  +V ++  ++    S E       ++      +L A+ 
Sbjct: 58  HLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIR 117

Query: 132 PNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY----YTLEDILF 187
                 +    Q  T       E +G     + P  E  P     + Y         I  
Sbjct: 118 FLGLEKKTRFYQASTS------ELYG--LVQEIPQKETTP-FYPRSPYAVAKLYAYWIT- 167

Query: 188 EEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP-LRFPGTKAAWEC 246
               +   +              P      V      A     +G+    + G   +   
Sbjct: 168 VNYRESYGMYACNGILFNHES--PRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD 225

Query: 247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300
           +  A D       ++   +    + E F    G  +  +   ++ A Q GI+  
Sbjct: 226 WGHAKDY-----VKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLR 274

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 50/305 (16%), Positives = 89/305 (29%), Gaps = 44/305 (14%)

Query: 28  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-------------KPNWNADHL 74
           VALI G+TG  G+ LAE L         ++V+G+ RR               P  + +  
Sbjct: 3   VALITGITGQDGSYLAEFLLEKG-----YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 57

Query: 75  VEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENC----KINGSMFRNVLRAV 130
           ++    D++D       ++++           ++     +       ++G     +L AV
Sbjct: 58  MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 117

Query: 131 IPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY----YTLEDIL 186
                       Q  T       E +GK++  + P  E  P     + Y         I+
Sbjct: 118 KTCGLINSVKFYQASTS------ELYGKVQ--EIPQKETTP-FYPRSPYGAAKLYAYWIV 168

Query: 187 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG-IPLRFPGTKAAWE 245
                +   L              P    N V      +    + G +     G   A  
Sbjct: 169 -VNFREAYNLFAVNGILFNHES--PRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR 225

Query: 246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEE 305
            +  A D        +        + E F    G+V   +   +      G       + 
Sbjct: 226 DWGHAKDYVEAMWLMLQ-----NDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKN 280

Query: 306 EEEGG 310
           E E G
Sbjct: 281 ENEVG 285

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	397
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.97
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.97
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.96
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.95
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.94
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.91
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.9
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.89
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.87
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.87
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.82
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.79
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.44
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.3
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.29
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.29
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.28
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.25
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.25
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.25
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.21
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.21
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.21
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.2
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.2
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.19
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.19
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.18
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.17
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.17
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.16
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.15
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.15
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.14
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.13
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.12
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.12
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.12
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.11
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.1
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.1
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.08
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.07
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.07
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.06
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.05
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.05
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.04
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.03
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.03
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.02
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.01
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.99
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.98
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.97
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.96
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.94
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.89
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.86
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.84
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.82
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.79
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.77
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.76
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.74
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.73
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.73
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	98.65
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.62
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	98.52
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.37
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.33
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.17
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.95
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	97.92
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.86
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.74
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.64
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.58
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.52
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	97.51
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.47
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.46
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.45
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.32
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.31
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.29
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.25
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.13
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.95
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.87
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.85
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.85
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.82
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.76
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.71
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.68
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.63
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.43
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.41
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.35
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.3
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	96.2
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.2
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.02
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.93
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.72
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.62
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	95.44
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.21
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.19
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.16
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	94.99
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.89
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.88
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.83
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.53
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	94.42
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.41
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	94.41
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.31
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.24
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.1
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.05
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.04
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.03
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.03
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.97
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	93.84
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	93.8
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.73
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.71
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.66
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	93.63
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.61
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	93.6
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.42
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.37
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	93.31
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.29
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	93.28
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.17
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	93.15
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.11
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.1
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.01
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.95
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	92.9
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.89
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.84
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.82
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.8
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.59
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	92.4
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.4
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	92.32
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	92.27
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.26
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.23
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.12
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.86
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.73
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.45
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.07
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	91.0
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.91
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.84
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	90.32
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.29
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.08
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	89.99
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	89.66
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.63
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	89.49
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	89.13
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	89.07
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.98
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.79
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.66
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	88.63
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.56
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.53
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	87.79
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	87.69
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.48
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.31
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.06
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	86.93
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	86.93
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	86.53
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.19
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	86.12
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.05
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	85.97
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	85.82
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	85.63
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	85.39
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	85.1
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	84.93
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.72
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	84.56
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	84.39
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.02
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	83.87
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	83.79
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	83.26
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	83.23
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	82.83
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	82.62
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	82.3
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	82.27
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.02
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	81.89
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	81.87
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	81.74
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	80.85
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	80.71
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	80.43

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-39  Score=307.92  Aligned_cols=320  Identities=16%  Similarity=0.102  Sum_probs=211.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------------CCCCCCceEEEccCCCHHHHHHHHcc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------------WNADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      |+|||||||||||++|+++|++     .||+|++++|.+...            ....++++++++|++|.+++.+.+++
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLE-----KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE   76 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHH-----CcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhc
Confidence            7899999999999999999999     899999999964210            11235789999999999999999987


Q ss_pred             C--CCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           95 L--TDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        95 ~--~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      +  |.|+|+|+.+....  .++...+++|+.||.||+++|++.+ .+..+|+++||..+|       |.  +...|++|+
T Consensus        77 ~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vY-------G~--~~~~~~~E~  147 (357)
T d1db3a_          77 VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELY-------GL--VQEIPQKET  147 (357)
T ss_dssp             HCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGG-------TT--CCSSSBCTT
T ss_pred             cCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhh-------CC--CCCCCcCCC
Confidence            6  67999988765433  4788899999999999999999863 356678888865555       43  135688999


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH-HhhhcCCCceecCCccc
Q 015961          170 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA-VCKHEGIPLRFPGTKAA  243 (397)
Q Consensus       170 ~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~g~~~~  243 (397)
                      +|..|...  |+.     |+++..+. ++.+++++++||++||||..+... ....+...+. +.. .+......|++.+
T Consensus       148 ~~~~P~~~--Y~~sK~~~E~~~~~~~-~~~~l~~~ilR~~~vyGp~~~~~~-~~~~i~~~~~~~~~-~~~~~~~~g~~~~  222 (357)
T d1db3a_         148 TPFYPRSP--YAVAKLYAYWITVNYR-ESYGMYACNGILFNHESPRRGETF-VTRKITRAIANIAQ-GLESCLYLGNMDS  222 (357)
T ss_dssp             SCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHT-TSCCCEEESCTTC
T ss_pred             CCCCCCCh--HHHHHHHHHHHHHHHH-HHhCCCEEEEEeccccCCCCCcCC-CchHHHHHHHHHHh-CCCceEEECCCCe
Confidence            98877544  664     55555554 567899999999999995332211 1112222221 222 2233455677877


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhc
Q 015961          244 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  323 (397)
Q Consensus       244 ~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (397)
                      .++++|+.|+   |.+++.++..  ..+++|||++++.+|++|+++.+.+.+|........         ...... .+.
T Consensus       223 ~r~~~~v~D~---~~a~~~~~~~--~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~---------~~~~~~-~~~  287 (357)
T d1db3a_         223 LRDWGHAKDY---VKMQWMMLQQ--EQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGT---------GVEEKG-IVV  287 (357)
T ss_dssp             EECCEEHHHH---HHHHHHTTSS--SSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESC---------GGGCEE-EEE
T ss_pred             eecceeechH---HHHHHHHHhC--CCCCeEEECCCCceehHHHHHHHHHHhCCccccccc---------cccccc-hhh
Confidence            7777776665   7777665543  356899999999999999999999999965321100         000000 000


Q ss_pred             cchHHHHHHHHHhCCCcccccccccchhhhhhh----cCcccccchhhHHH-cCCCCccCCHHHHHHHHHHH
Q 015961          324 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVL----TGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV  390 (397)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~  390 (397)
                      ...  +.   ......+....     ...+...    ......+|++|+++ |||+|+++++|+|+++++++
T Consensus       288 ~~~--~~---~~~~~~~~~~~-----~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~  349 (357)
T d1db3a_         288 SVT--GH---DAPGVKPGDVI-----IAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND  349 (357)
T ss_dssp             EEC--SS---SCTTCCTTCEE-----EEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             hhh--cc---cccccccCcee-----EeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            000  00   00000000000     0000000    01145679999986 69999999999999998653

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1e-36  Score=283.41  Aligned_cols=292  Identities=14%  Similarity=0.156  Sum_probs=214.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc------EEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW------KVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~------~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      |||||||||||||++|+++|++     +||      +|+++++.....       .....+++++.+|+.+.........
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~-----~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   75 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLA-----GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR   75 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc
Confidence            4799999999999999999998     565      455565432111       1134678999999999999888888


Q ss_pred             cCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  171 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p  171 (397)
                      ..|.|+|+|+.+....  .++.+.+++|+.|+.+++++|++.+  +++++++||..+|+.+         ...+++|++|
T Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~--~~~~I~~Ss~~~yg~~---------~~~~~~E~~~  144 (322)
T d1r6da_          76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSI---------DSGSWTESSP  144 (322)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCC---------SSSCBCTTSC
T ss_pred             ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC--CceEEEeecceeecCC---------CCCCCCCCCC
Confidence            8999999976433322  2567788999999999999999864  6889988876655432         2567899998


Q ss_pred             CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc-hhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961          172 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWE  245 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  245 (397)
                      ..|...  |+.     |+++..+. ++++++++++||++|||  |+... .+...+   +. ....+.++.+.|++.+.+
T Consensus       145 ~~p~~~--Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyG--p~~~~~~~i~~~---i~-~~~~~~~i~v~~~g~~~r  215 (322)
T d1r6da_         145 LEPNSP--YAASKAGSDLVARAYH-RTYGLDVRITRCCNNYG--PYQHPEKLIPLF---VT-NLLDGGTLPLYGDGANVR  215 (322)
T ss_dssp             CCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEEC--TTCCTTSHHHHH---HH-HHHTTCCEEEETTSCCEE
T ss_pred             CCCCCH--HHHHHHHHHHHHHHHH-HHhCCCEEEEEeeeEEC--cCCCcCcHHHHH---HH-HHHcCCCcEEecCCCeEE
Confidence            877654  664     56666655 67789999999999999  44322 222222   11 112366777788888888


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961          246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  325 (397)
Q Consensus       246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (397)
                      +++|+.|+   |++++.++.+ ...+++||+++++.+|+.|+++.+.+.+|.+......           .         
T Consensus       216 ~~i~v~D~---a~ai~~~~~~-~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~-----------~---------  271 (322)
T d1r6da_         216 EWVHTDDH---CRGIALVLAG-GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK-----------V---------  271 (322)
T ss_dssp             EEEEHHHH---HHHHHHHHHH-CCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEE-----------E---------
T ss_pred             ccEEHHHH---HHHHHHHHhC-CCCCCeeEEeecccchhHHHHHHHHHHhCCCccceee-----------c---------
Confidence            88877776   7777776655 3457899999999999999999999999976432110           0         


Q ss_pred             hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                   ...+...             ....+|++|+++ |||+|+++++|||+++++||+++
T Consensus       272 -------------~~~~~~~-------------~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n  314 (322)
T d1r6da_         272 -------------ADRKGHD-------------LRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN  314 (322)
T ss_dssp             -------------CCCTTCC-------------CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             -------------CCCCCCC-------------ceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence                         0000000             034589999986 69999999999999999999874

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.3e-37  Score=289.03  Aligned_cols=303  Identities=16%  Similarity=0.120  Sum_probs=217.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ++|+|||||||||||++|+++|++     .||+|++++|.....            ......++++.+|+.|...+....
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~   89 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLK-----LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC   89 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc
Confidence            457999999999999999999999     899999999854321            001246889999999999988888


Q ss_pred             ccCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961           93 SQLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      ...+.|+|+++.+....  .++...+++|+.|+.+|+++|++.+  +++++++||..+|+..         ...|.+|++
T Consensus        90 ~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~--~~~~i~~SS~~vyg~~---------~~~~~~E~~  158 (341)
T d1sb8a_          90 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTYGDH---------PGLPKVEDT  158 (341)
T ss_dssp             TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTC---------CCSSBCTTC
T ss_pred             ccccccccccccccccccccCccchhheeehhHHHHHHHHHhcC--CceEEEcccceeeCCC---------CCCCccCCC
Confidence            88888999876544322  2677889999999999999999864  7789988876666432         256789999


Q ss_pred             CCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961          171 PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  245 (397)
Q Consensus       171 p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  245 (397)
                      |..|...  |+.     |+++..+. +..+++++++||++|||+..........-+..+.. ....+.++.+.|++.+.+
T Consensus       159 ~~~p~~~--Y~~sK~~~E~~~~~~~-~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~-~~~~g~~i~~~g~g~~~r  234 (341)
T d1sb8a_         159 IGKPLSP--YAVTKYVNELYADVFS-RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTS-SMIQGDDVYINGDGETSR  234 (341)
T ss_dssp             CCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHH-HHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCc--chHHHHHHHHHHHHHH-HHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHH-HHHcCCceEEcCCCCEEE
Confidence            9877654  664     55555554 66789999999999999643321111111111111 112367777788888777


Q ss_pred             eeeecccHHHHHHHHHHHhcCC-CCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhcc
Q 015961          246 CYSIASDADLIAEHQIWAAVDP-YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKG  324 (397)
Q Consensus       246 ~~~~~~da~~la~~~~~~~~~~-~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (397)
                      +++|+.|+   |.++..+.... ...+++||++++...|+.|+++.+.+.++.+......         .+..       
T Consensus       235 ~~i~v~D~---~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~---------~~~~-------  295 (341)
T d1sb8a_         235 DFCYIENT---VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHR---------EPVY-------  295 (341)
T ss_dssp             CCEEHHHH---HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCC---------CCEE-------
T ss_pred             EEEEEecc---chhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccc---------cccc-------
Confidence            77776665   66666555443 3567899999999999999999999999865432211         0000       


Q ss_pred             chHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          325 KEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                                 ....+..               ....++|++|+++ |||+|+++++|+|+++++||++
T Consensus       296 -----------~~~~~~~---------------~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~  338 (341)
T d1sb8a_         296 -----------RDFREGD---------------VRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM  338 (341)
T ss_dssp             -----------ECCCTTC---------------CSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             -----------cCCCCCC---------------cCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence                       0000000               0134579999997 6999999999999999999985

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-36  Score=288.10  Aligned_cols=305  Identities=12%  Similarity=0.023  Sum_probs=212.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      +.+.|||||||||||||++|+++|++     +||+|++++|....... .....++..+|+.+.+.+..+++++|.|+|+
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~   86 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKH-----EGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNL   86 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeec
Confidence            33567899999999999999999999     89999999986544321 2245688999999999999999999999999


Q ss_pred             EEecccC---CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCc
Q 015961          102 FYVTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  178 (397)
Q Consensus       102 a~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~  178 (397)
                      |+.....   ...+......|+.++.+++++|++.+  +++++++||..+|+....  .+.........|..|..|... 
T Consensus        87 a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~--vk~~i~~SS~~~~~~~~~--~~~~~~~~~~~e~~~~~p~~~-  161 (363)
T d2c5aa1          87 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING--IKRFFYASSACIYPEFKQ--LETTNVSLKESDAWPAEPQDA-  161 (363)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEEEGGGSCGGGS--SSSSSCEECGGGGSSBCCSSH-
T ss_pred             ccccccccccccccccccccccchhhHHHHhHHhhC--cccccccccccccccccc--ccccccccccccCCcCCCCCH-
Confidence            7654322   23667788999999999999999864  789999988777764321  110001112334445555433 


Q ss_pred             chhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccH
Q 015961          179 YYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDA  253 (397)
Q Consensus       179 ~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da  253 (397)
                       |+.     |+++..+. +..|++++++||+++||+........................+....|++.+.++++++.|+
T Consensus       162 -Yg~sK~~~E~~~~~~~-~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~  239 (363)
T d2c5aa1         162 -FGLEKLATEELCKHYN-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC  239 (363)
T ss_dssp             -HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH
T ss_pred             -HHHHHHHHHHHHHHHH-HHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHH
Confidence             664     55555554 66789999999999999533211110001111111112234455667788877778777665


Q ss_pred             HHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHH
Q 015961          254 DLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIV  333 (397)
Q Consensus       254 ~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (397)
                         +.+++.++..  ..+++||++++..+|+.|+++.+.+.+|.+.....            .+                
T Consensus       240 ---~~~~~~~~~~--~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~------------~~----------------  286 (363)
T d2c5aa1         240 ---VEGVLRLTKS--DFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHH------------IP----------------  286 (363)
T ss_dssp             ---HHHHHHHHHS--SCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEE------------EC----------------
T ss_pred             ---HHHHHHHHhC--CCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEe------------CC----------------
Confidence               6666666543  35788999999999999999999999987643210            00                


Q ss_pred             HHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          334 RENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                           .+..               .....+|++|+++ |||+|.++++|+++++++||++
T Consensus       287 -----~~~~---------------~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~  326 (363)
T d2c5aa1         287 -----GPEG---------------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKE  326 (363)
T ss_dssp             -----CCCC---------------CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHH
T ss_pred             -----CCCC---------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence                 0000               0134579999986 6999999999999999999975

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=9.9e-37  Score=287.74  Aligned_cols=310  Identities=14%  Similarity=0.097  Sum_probs=212.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCC-------CCCCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKP-------NWNADHLVEYVQCDVSDPEETQAKLSQ--LT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~-------~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~   96 (397)
                      |||||||||||||++|+++|++     .|++ |+++++....       .....++++++++|++|.+.+..++++  +|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~-----~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   75 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIK-----NTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPD   75 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----HCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCC
Confidence            4799999999999999999998     7887 5566654321       122346899999999999999988875  67


Q ss_pred             CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccC-------CCcceEEEecCCccccccccccCCCCCCCCC-C
Q 015961           97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA-------PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP-F  166 (397)
Q Consensus        97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-------~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~-~  166 (397)
                      .|+|+|+.+....  .++...+++|+.||.+++++|++.+       .++++|+++||..+|+......-.......| .
T Consensus        76 ~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~  155 (361)
T d1kewa_          76 AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF  155 (361)
T ss_dssp             EEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB
T ss_pred             EEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCc
Confidence            7999987544322  2678889999999999999998752       1356899998887776432111100000122 2


Q ss_pred             CCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc-hhHHHHHHHHHHhhhcCCCceecCC
Q 015961          167 TEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGT  240 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~  240 (397)
                      .|+.+..|...  |+.     |+++..+. ++++++++++||++|||  |+... .++..+...  +  ..+.++.+.|+
T Consensus       156 ~e~~~~~p~s~--Yg~sK~~~E~~~~~~~-~~~~i~~~~lR~~~vyG--p~~~~~~~i~~~i~~--~--~~g~~~~v~g~  226 (361)
T d1kewa_         156 TETTAYAPSSP--YSASKASSDHLVRAWR-RTYGLPTIVTNCSNNYG--PYHFPEKLIPLVILN--A--LEGKPLPIYGK  226 (361)
T ss_dssp             CTTSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEES--TTCCTTSHHHHHHHH--H--HHTCCEEEETT
T ss_pred             ccCCCCCCCCH--HHHHHHHHHHHHHHHH-HHhCCCEEEEecCceEC--cCCCcCcHHHHHHHH--H--HcCCCcEEeCC
Confidence            34455555443  664     55555554 56789999999999999  54322 222222111  1  13667777888


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961          241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  320 (397)
Q Consensus       241 ~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
                      +.+.++++|+.|+   |.+++.++.+ ...+++|||+++..+|+.|+++.+.+.++........         ...    
T Consensus       227 g~~~r~~i~v~D~---a~ai~~~~~~-~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~---------~~~----  289 (361)
T d1kewa_         227 GDQIRDWLYVEDH---ARALHMVVTE-GKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATS---------YRE----  289 (361)
T ss_dssp             SCCEEEEEEHHHH---HHHHHHHHHH-CCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSC---------GGG----
T ss_pred             CCeEEeCEEHHHH---HHHHHHHHhc-CCCCCeEEECCCCCcchHHHHhHhhhhcccccccccC---------ccc----
Confidence            8888888877776   7777776655 3457899999999999999999999988754432110         000    


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                           .+.......     .....+.+|++|+++ |||+|.++++|+|+++++||+++
T Consensus       290 ---------------------~~~~~~~~~-----~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         290 ---------------------QITYVADRP-----GHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             ---------------------GEEEECCCT-----TCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             ---------------------ceeecCCCC-----CCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence                                 000000000     011145689999986 69999999999999999999775

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-36  Score=281.83  Aligned_cols=297  Identities=14%  Similarity=0.068  Sum_probs=203.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc--cCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS--QLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~   96 (397)
                      |||||||||||||++|+++|++     +||+|++++|.....        .....+++++++|++|.+.+.++++  ++|
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   75 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQ-----NGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAID   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCC
Confidence            4799999999999999999999     899999998743221        0123579999999999999999988  678


Q ss_pred             CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC-C
Q 015961           97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-L  173 (397)
Q Consensus        97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~-~  173 (397)
                      .|+|+|+...+..  .++.+.+++|+.||.|+|++|++.+  +++++++||..+|...         ...+..|..+. .
T Consensus        76 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~--v~~~i~~Ss~~vy~~~---------~~~~~~e~~~~~~  144 (338)
T d1udca_          76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGDQ---------PKIPYVESFPTGT  144 (338)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSC---------CSSSBCTTSCCCC
T ss_pred             EEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC--CCEEEecCcceEEccc---------cccccccccccCC
Confidence            8999987543322  2677889999999999999999874  7889888876666432         12333444432 2


Q ss_pred             CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--------chhHHHHHHHHHHhhhcCCCceecCC
Q 015961          174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--------MNLVGALCVYAAVCKHEGIPLRFPGT  240 (397)
Q Consensus       174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~g~  240 (397)
                      |..  .|+.     |+++.++..+..+++++++||++|||+.+...        .+...+.  ++......+.++.+.|+
T Consensus       145 p~~--~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~i~i~g~  220 (338)
T d1udca_         145 PQS--PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPY--IAQVAVGRRDSLAIFGN  220 (338)
T ss_dssp             CSS--HHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHH--HHHHHTTSSSCEEEECS
T ss_pred             Ccc--hHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHH--HHHHHhcCCCCEEEeCC
Confidence            332  3553     56666555456689999999999999644211        1111111  11112222345554443


Q ss_pred             ------ccccceeeecccHHHHHHHHHHHh--cCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCC
Q 015961          241 ------KAAWECYSIASDADLIAEHQIWAA--VDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGG  312 (397)
Q Consensus       241 ------~~~~~~~~~~~da~~la~~~~~~~--~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  312 (397)
                            +.+.++++++.|+   +.+...+.  ......+++||++++..+|+.|+++.+.+.+|.+.....         
T Consensus       221 ~~~~~~g~~~rd~i~v~D~---~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~---------  288 (338)
T d1udca_         221 DYPTEDGTGVRDYIHVMDL---ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF---------  288 (338)
T ss_dssp             CSSSTTSSCEECEEEHHHH---HHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEE---------
T ss_pred             CcccCCCCceeeEEEEeeh---hhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEE---------
Confidence                  4445556665554   43333222  233455789999999999999999999999997543210         


Q ss_pred             ccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHh
Q 015961          313 TQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  391 (397)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~  391 (397)
                         .                    ...+..               .....+|++|+|+ |||+|.++++|+|+++++|++
T Consensus       289 ---~--------------------~~~~~~---------------~~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~  330 (338)
T d1udca_         289 ---A--------------------PRREGD---------------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQS  330 (338)
T ss_dssp             ---E--------------------CCCTTC---------------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             ---C--------------------CCCCCC---------------CCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence               0                    000000               0134579999996 699999999999999999998


Q ss_pred             cC
Q 015961          392 GF  393 (397)
Q Consensus       392 ~~  393 (397)
                      +.
T Consensus       331 ~~  332 (338)
T d1udca_         331 RH  332 (338)
T ss_dssp             HC
T ss_pred             hc
Confidence            87

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=286.75  Aligned_cols=292  Identities=15%  Similarity=0.119  Sum_probs=199.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      +|||||||||||||++|+++|++     +|++|++++|.....      ......+++...|+.+     .++.++|.|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~~~d~Vi   70 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMM-----DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-----PLYIEVDQIY   70 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS-----CCCCCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHH-----HHHcCCCEEE
Confidence            47999999999999999999998     899999998743221      1122345555566543     3456788899


Q ss_pred             EEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  177 (397)
Q Consensus       100 h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~  177 (397)
                      |+|+.....  ..++.+.+++|+.|+.||+++|++.+  + +++++||..+|+.+  ..++.  .+....|.+|..|.  
T Consensus        71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~--~-k~I~~SS~~vy~~~--~~~~~--~e~~~~~~~~~~p~--  141 (312)
T d2b69a1          71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--A-RLLLASTSEVYGDP--EVHPQ--SEDYWGHVNPIGPR--  141 (312)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--C-EEEEEEEGGGGBSC--SSSSB--CTTCCCBCCSSSTT--
T ss_pred             ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC--C-cEEEEEChheecCC--CCCCC--CccccCCCCCCCCc--
Confidence            998754432  23678889999999999999999864  3 67878877766543  11111  11222333444443  


Q ss_pred             cchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc-hhHHHHHHHHHHhhhcCCCceecCCccccceeeecc
Q 015961          178 FYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIAS  251 (397)
Q Consensus       178 ~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~  251 (397)
                      ..|+.     |+++..+. +.+|++++++||+.||||...... .+...+   +. ....+.++.++|++.+.++++|+.
T Consensus       142 ~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~---i~-~~~~g~~i~i~~~g~~~r~~i~v~  216 (312)
T d2b69a1         142 ACYDEGKRVAETMCYAYM-KQEGVEVRVARIFNTFGPRMHMNDGRVVSNF---IL-QALQGEPLTVYGSGSQTRAFQYVS  216 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTCCTTCCCHHHHH---HH-HHHHTCCEEEESSSCCEEECEEHH
T ss_pred             cHHHHHHHHHHHHHHHHH-HHhCCcEEEEEeeeEECCCCCCCCccHHHHH---HH-HHHcCCCeEEeCCCCeeEccEEHH
Confidence            34664     56665554 667999999999999995433221 222222   11 112367777888888878777776


Q ss_pred             cHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHH
Q 015961          252 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  331 (397)
Q Consensus       252 da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (397)
                      |+   |++++.++..  ..+++||++++..+++.+++..+++.+|.+......                           
T Consensus       217 D~---~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------------  264 (312)
T d2b69a1         217 DL---VNGLVALMNS--NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFL---------------------------  264 (312)
T ss_dssp             HH---HHHHHHHHTS--SCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEE---------------------------
T ss_pred             HH---HHHHHHHHhh--ccCCceEecCCcccchhhHHHHHHHHhCCCCceEEC---------------------------
Confidence            65   7777665543  346789999999999999999999999976432000                           


Q ss_pred             HHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          332 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                           +..+.   .            .....+|++|+++ +||+|.++++|+|+++++||+++
T Consensus       265 -----~~~~~---~------------~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~  307 (312)
T d2b69a1         265 -----SEAQD---D------------PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE  307 (312)
T ss_dssp             -----CCCTT---C------------CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             -----CCCCC---C------------CCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence                 00000   0            0134579999985 69999999999999999999763

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.8e-36  Score=280.66  Aligned_cols=304  Identities=14%  Similarity=0.088  Sum_probs=209.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc--cCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--QLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~--~~~   96 (397)
                      |.|||||||||||++|+++|++     +|++|++++|......        ....+++++++|++|.+.+..++.  ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIE-----NGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHH-----CcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCC
Confidence            5799999999999999999999     8999999987433211        123578999999999999998887  578


Q ss_pred             CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+......  .++.....+|+.|+.+++++|++.+  +++++++||..+|+....     .+...+++|+.+..|
T Consensus        77 ~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~--i~~~i~~SS~~vyg~~~~-----~~~~~~~~e~~~~~p  149 (347)
T d1z45a2          77 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDATR-----FPNMIPIPEECPLGP  149 (347)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGGG-----STTCCSBCTTSCCCC
T ss_pred             EEEEccccccccccccCcccccccchhhhHHHHHHHHhcc--cceEEeecceeeecCccc-----CCCCCccccccCCCC
Confidence            8999987543322  2567788999999999999999864  789999998877764321     122567788888776


Q ss_pred             CCCcchhH-----HHHHHHHHh-cCCCeeEEEEcCCceeeccCCCc--------chhHHHHHHHHHHhhhcCCCceecCC
Q 015961          175 APNFYYTL-----EDILFEEVE-KKEELSWSVHRPDTIFGFSPYSL--------MNLVGALCVYAAVCKHEGIPLRFPGT  240 (397)
Q Consensus       175 ~~~~~y~~-----e~~l~~~~~-~~~g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~g~  240 (397)
                      ...  |+.     |+++.++.. ...+++++++||+.+||+.+...        .+.....  ........+.++.+.|+
T Consensus       150 ~~~--Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~i~i~g~  225 (347)
T d1z45a2         150 TNP--YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPY--MAQVAVGRREKLYIFGD  225 (347)
T ss_dssp             CSH--HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH--HHHHHTTSSSCCCCC--
T ss_pred             CCh--hHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHH--HHHHHhcCCCCeEEeCC
Confidence            544  665     455554431 34679999999999999654321        1111111  11112223455555666


Q ss_pred             cccc---ceeeecccHHHHHHHHHHHhc------CCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCC
Q 015961          241 KAAW---ECYSIASDADLIAEHQIWAAV------DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGG  311 (397)
Q Consensus       241 ~~~~---~~~~~~~da~~la~~~~~~~~------~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  311 (397)
                      +.+.   .++.|+.++.+.+.+++.++.      .....+++||+++++++|+.|+++.+.+.+|.+......       
T Consensus       226 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~-------  298 (347)
T d1z45a2         226 DYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVT-------  298 (347)
T ss_dssp             ----CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC----------
T ss_pred             CccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeC-------
Confidence            5443   345555556555655555433      223457899999999999999999999999976443100       


Q ss_pred             CccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHH
Q 015961          312 GTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV  390 (397)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~  390 (397)
                           +                .    .+...               .+..+|++|+++ |||+|.++++|+|+++++|+
T Consensus       299 -----~----------------~----~~~~~---------------~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~  338 (347)
T d1z45a2         299 -----G----------------R----RAGDV---------------LNLTAKPDRAKRELKWQTELQVEDSCKDLWKWT  338 (347)
T ss_dssp             -------------------------------C---------------CCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHH
T ss_pred             -----C----------------C----CCCCC---------------CEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHH
Confidence                 0                0    00000               034579999986 79999999999999999999


Q ss_pred             hcC
Q 015961          391 KGF  393 (397)
Q Consensus       391 ~~~  393 (397)
                      +++
T Consensus       339 ~~n  341 (347)
T d1z45a2         339 TEN  341 (347)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            987

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=6e-36  Score=280.94  Aligned_cols=299  Identities=11%  Similarity=0.031  Sum_probs=206.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC--CCC------CCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP--KPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~--~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      |+|||||||||||++|+++|++     .|++|.+++++.  ...      .....+++++.+|+.|.+.+..++..++.|
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~-----~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v   77 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYN-----NHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAI   77 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHH-----HCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHH-----CCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhh
Confidence            7899999999999999999998     777655554432  111      112358899999999999999999999999


Q ss_pred             eEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCC-----CCCCCCCCCCCC
Q 015961           99 THIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI-----KPYDPPFTEDMP  171 (397)
Q Consensus        99 ~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~-----~~~~~~~~E~~p  171 (397)
                      +|+|+.+....  .++.+.+++|+.|+.|++++|+..+   .++++.||..+|++.  .+...     ........|+++
T Consensus        78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~---~k~i~~ss~~vyg~~--~~~~~~~~~~~~~~~~~~e~~~  152 (346)
T d1oc2a_          78 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD---IRFHHVSTDEVYGDL--PLREDLPGHGEGPGEKFTAETN  152 (346)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEEGGGGCCB--CCGGGSTTTTCSTTSSBCTTSC
T ss_pred             hhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc---ccccccccceEeccc--CccccccccccCcccccccCCC
Confidence            99976543322  2667889999999999999999875   345556666666532  11100     011234556666


Q ss_pred             CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961          172 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  246 (397)
Q Consensus       172 ~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  246 (397)
                      ..|...  |+.     |+++..+. +..+++++++||++||||..... .....+   +. ....+.++...|++.+.+.
T Consensus       153 ~~p~s~--Y~~sK~~~E~~~~~~~-~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~---i~-~~~~~~~~~i~~~g~~~r~  224 (346)
T d1oc2a_         153 YNPSSP--YSSTKAASDLIVKAWV-RSFGVKATISNCSNNYGPYQHIE-KFIPRQ---IT-NILAGIKPKLYGEGKNVRD  224 (346)
T ss_dssp             CCCCSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEESTTCCTT-SHHHHH---HH-HHHHTCCCEEETTSCCEEE
T ss_pred             CCCCCH--HHHHHHHHHHHHHHHH-HHcCCCEEEEeecceeCCCCCcc-chhHHH---HH-HHHcCCceeEeCCCCcccc
Confidence            555443  664     55655554 66789999999999999432211 111111   11 1123556677888888888


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccch
Q 015961          247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE  326 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (397)
                      ++|+.|+   |++++.+..+ ...++.||+++++..++.++++.+.+.+|.+...+..           .          
T Consensus       225 ~i~v~D~---a~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------~----------  279 (346)
T d1oc2a_         225 WIHTNDH---STGVWAILTK-GRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH-----------V----------  279 (346)
T ss_dssp             CEEHHHH---HHHHHHHHHH-CCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEE-----------E----------
T ss_pred             ccchhhH---HHHHHHHHhh-cccCccccccccccccchHHHHHHHHHhCCCCcceEE-----------C----------
Confidence            8877766   6666665554 4567789999999999999999999999876433211           0          


Q ss_pred             HHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCcc-CCHHHHHHHHHHHhcC
Q 015961          327 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVKGF  393 (397)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~e~~~~~~~~~~~~  393 (397)
                                ...+..               ..+..+|++|+++ |||+|++ +++|||+++++||+++
T Consensus       280 ----------~~~~~~---------------~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n  323 (346)
T d1oc2a_         280 ----------TDRAGH---------------DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN  323 (346)
T ss_dssp             ----------CCCTTC---------------CCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             ----------CCCCCC---------------CceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence                      000000               0134579999986 6999997 5999999999999874

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=6.7e-35  Score=270.71  Aligned_cols=297  Identities=14%  Similarity=0.123  Sum_probs=206.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHccCCC--
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQLTD--   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~--   97 (397)
                      |+|||||||||||++|+++|++     +||+|++++|.....       ....++++++.+|++|.+.+...+....+  
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~-----~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLE-----KGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccccccc
Confidence            6899999999999999999999     899999999975432       11235789999999999999888877554  


Q ss_pred             eeEEEEeccc--CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961           98 VTHIFYVTWT--NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus        98 V~h~a~~~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      ++|+++....  ...++.+.++.|+.|+.+++++|++.+. .+++++.|+..+|+       ..  ...+.+|++|..|.
T Consensus        76 ~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~-~~~~i~~Ss~~~~~-------~~--~~~~~~E~~~~~p~  145 (321)
T d1rpna_          76 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMFG-------LI--QAERQDENTPFYPR  145 (321)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGGC-------SC--SSSSBCTTSCCCCC
T ss_pred             cccccccccccccccchHHHHhhhhhchHHHHHHHHHhCC-CcccccccchhhcC-------cc--cCCCCCCCCCcccc
Confidence            4444322111  1236778899999999999999998753 45677666555443       21  24566788887765


Q ss_pred             CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHH-HHhhhcCCCceecCCccccceee
Q 015961          176 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYA-AVCKHEGIPLRFPGTKAAWECYS  248 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~-~i~~~~~~~~~~~g~~~~~~~~~  248 (397)
                      ..  |+.     |+++..+. +..+++++++||+++|||.  ...+.. ..+..++ .+..+ +.+....|++.+.+.++
T Consensus       146 ~~--Y~~sK~~~E~~~~~~~-~~~~~~~~~lr~~~vyGp~--~~~~~~~~~i~~~~~~~~~~-~~~~i~~g~g~~~r~~i  219 (321)
T d1rpna_         146 SP--YGVAKLYGHWITVNYR-ESFGLHASSGILFNHESPL--RGIEFVTRKVTDAVARIKLG-KQQELRLGNVDAKRDWG  219 (321)
T ss_dssp             SH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTT--SCTTSHHHHHHHHHHHHHTT-SCSCEEESCTTCEEECE
T ss_pred             Ch--hHHHHHHHHHHHHHHH-hhcCCcEEEEEEecccCCC--ccccccHHHHHHHHHHHHhC-CCCcEEECCCCeEEccE
Confidence            44  664     66666655 6678999999999999953  222221 1121111 12221 23445578888888787


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHH
Q 015961          249 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  328 (397)
Q Consensus       249 ~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (397)
                      |+.|+   |++++.++.++  .++.||+++++..|+.++++.+.+.+|........           .+.          
T Consensus       220 ~v~D~---~~~~~~~~~~~--~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----------~~~----------  273 (321)
T d1rpna_         220 FAGDY---VEAMWLMLQQD--KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLK-----------IDP----------  273 (321)
T ss_dssp             EHHHH---HHHHHHHHHSS--SCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEE-----------ECG----------
T ss_pred             EeHHH---HHHHHHHHhcC--CcCCceecccccceehhhhHHHHHHhCCCccceee-----------cCC----------
Confidence            77665   77777777654  35679999999999999999999999876432210           000          


Q ss_pred             HHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          329 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                             ...++..               ......|++|+++ |||+|+++++|+|+++++|+.+
T Consensus       274 -------~~~rp~~---------------~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~  316 (321)
T d1rpna_         274 -------AFFRPAE---------------VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR  316 (321)
T ss_dssp             -------GGCCSSC---------------CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             -------CCCCCCc---------------cCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence                   0000100               0144579999997 6999999999999999999754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-35  Score=274.76  Aligned_cols=300  Identities=13%  Similarity=0.060  Sum_probs=201.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------------CCCCCCceEEEccCCCHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------------WNADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------------~~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      |.|||||||||||||++|+++|++     +|++|++++|.....              .....+++++++|++|.+.+.+
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~-----~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~   75 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLE-----AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR   75 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHH-----TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHH-----CcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccc
Confidence            778999999999999999999998     899999998632211              0123578999999999999999


Q ss_pred             HHccCCC--eeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           91 KLSQLTD--VTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        91 ~~~~~~~--V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      .+.+.++  |+|+|+......  .++.+.+++|+.|+.+++++|++.+  ++++++.||..+|+..       . .....
T Consensus        76 ~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~--v~~~i~~ss~~~~~~~-------~-~~~~~  145 (346)
T d1ek6a_          76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVYGNP-------Q-YLPLD  145 (346)
T ss_dssp             HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGGCSC-------S-SSSBC
T ss_pred             cccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC--cccccccccceeeecc-------c-ccccc
Confidence            8888775  788876543322  2677889999999999999999864  7788888765555322       1 01111


Q ss_pred             CCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--------chhHHHHHHHHHHhhhcCC
Q 015961          167 TEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--------MNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~i~~~~~~  233 (397)
                      .+.....+  ...|+.     |+.+.+++....+++.+++||+.+||+.....        .+.....  ++......+.
T Consensus       146 ~~~~~~~~--~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  221 (346)
T d1ek6a_         146 EAHPTGGC--TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPY--VSQVAIGRRE  221 (346)
T ss_dssp             TTSCCCCC--SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH--HHHHHHTSSS
T ss_pred             cccccccc--CChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHH--HHHHHHcCCC
Confidence            11111222  223553     66666665345789999999999999643211        1111111  1111222344


Q ss_pred             CceecC------CccccceeeecccHHHHHHHHHHHh--cCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCch
Q 015961          234 PLRFPG------TKAAWECYSIASDADLIAEHQIWAA--VDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEE  305 (397)
Q Consensus       234 ~~~~~g------~~~~~~~~~~~~da~~la~~~~~~~--~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~  305 (397)
                      ++.+.|      .+.+.++++|+.|+   |.++..+.  ......+++|||+++..+|+.|+++.+.+.+|.+.+.... 
T Consensus       222 ~i~i~g~~~~~~~g~~~Rdfi~v~D~---a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~-  297 (346)
T d1ek6a_         222 ALNVFGNDYDTEDGTGVRDYIHVVDL---AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVV-  297 (346)
T ss_dssp             CEEEECSCSSSSSSSCEECEEEHHHH---HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEE-
T ss_pred             cEEEcCCcccCCCCCeeEeEEEEEec---cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEEC-
Confidence            444333      34444556665554   55554442  2345567899999999999999999999999976432100 


Q ss_pred             hhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHH
Q 015961          306 EEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFI  384 (397)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~  384 (397)
                               +                      ..+...               .+..+|++|+++ |||+|.++++|+++
T Consensus       298 ---------~----------------------~~~~e~---------------~~~~~d~~k~~~~lgw~p~~slee~I~  331 (346)
T d1ek6a_         298 ---------A----------------------RREGDV---------------AACYANPSLAQEELGWTAALGLDRMCE  331 (346)
T ss_dssp             ---------C----------------------CCTTCC---------------SEECBCCHHHHHTTCCCCCCCHHHHHH
T ss_pred             ---------C----------------------CCCCCC---------------CEeeECHHHHHHHHCCCcCCCHHHHHH
Confidence                     0                      000000               134579999987 69999999999999


Q ss_pred             HHHHHHhcC
Q 015961          385 TWIDKVKGF  393 (397)
Q Consensus       385 ~~~~~~~~~  393 (397)
                      ++++|++++
T Consensus       332 ~~i~w~~~n  340 (346)
T d1ek6a_         332 DLWRWQKQN  340 (346)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999976

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4e-35  Score=274.77  Aligned_cols=313  Identities=16%  Similarity=0.173  Sum_probs=204.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCC--CCCCCCCceEEEccCCCHHHHHH-HHccCCCeeEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKP--NWNADHLVEYVQCDVSDPEETQA-KLSQLTDVTHIF  102 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~d~~~l~~-~~~~~~~V~h~a  102 (397)
                      |||||||||||||++|+++|++     +| ++|+++++....  .....++++++++|+++.+++.+ .++++|.|+|+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~-----~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a   75 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLR-----EDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHH-----STTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccc
Confidence            4799999999999999999987     66 589999886432  22344789999999998766544 677899999998


Q ss_pred             EecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC-----CCC
Q 015961          103 YVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-----LDA  175 (397)
Q Consensus       103 ~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~-----~~~  175 (397)
                      +.+....  .++...+.+|+.|+.+++++|.+.+  . ++++.||..+|+...         .....|..+.     ...
T Consensus        76 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~-~~~~~ss~~~~~~~~---------~~~~~~~~~~~~~~~~~~  143 (342)
T d2blla1          76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--K-RIIFPSTSEVYGMCS---------DKYFDEDHSNLIVGPVNK  143 (342)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--C-EEEEECCGGGGBTCC---------CSSBCTTTCCCBCCCTTC
T ss_pred             ccccccccccCCcccccccccccccccccccccc--c-ccccccccccccccc---------ccccccccccccccccCC
Confidence            7544322  2567789999999999999998864  3 334566666665432         1112222111     111


Q ss_pred             CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc----hhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961          176 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM----NLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  246 (397)
Q Consensus       176 ~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  246 (397)
                      +...|+.     |+++..+. +..+++++++||+.+||+......    .....+..++. ....|.++.++|++.+.++
T Consensus       144 p~~~Y~~sK~~~E~~~~~~~-~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~g~~~r~  221 (342)
T d2blla1         144 PRWIYSVSKQLLDRVIWAYG-EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL-NLVEGSPIKLIDGGKQKRC  221 (342)
T ss_dssp             GGGHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHH-HHHHTCCEEEGGGSCCEEE
T ss_pred             Ccchhhhcccchhhhhhhhh-cccCceeEEeeccccccccccccccccccccccchHHHH-HHHhCCCccccCCCCeeee
Confidence            2344765     44555444 566899999999999996433211    11111111111 1123678888888888888


Q ss_pred             eeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC-eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhc
Q 015961          247 YSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  323 (397)
Q Consensus       247 ~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (397)
                      ++|+.|+   |.+++.++.++  ...+++||+++++ .+|++|+++.+.+.+|........         .+..... ..
T Consensus       222 ~i~v~D~---~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~---------~~~~~~~-~~  288 (342)
T d2blla1         222 FTDIRDG---IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHF---------PPFAGFR-VV  288 (342)
T ss_dssp             CEEHHHH---HHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGS---------CCCCCEE-EC
T ss_pred             ecccccc---cceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCcccccc---------Ccccccc-ee
Confidence            8877776   67777766653  4568999998765 589999999999999875432111         0000000 00


Q ss_pred             cchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          324 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      ...       ...+....           +    .....+|++|+++ |||+|+++++|+|+++++||++.
T Consensus       289 ~~~-------~~~~~~~~-----------~----~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~  337 (342)
T d2blla1         289 ESS-------SYYGKGYQ-----------D----VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT  337 (342)
T ss_dssp             ----------------------------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ccc-------cccccccc-----------c----ccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence            000       00000000           0    0134579999986 69999999999999999999764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-34  Score=270.75  Aligned_cols=315  Identities=14%  Similarity=0.033  Sum_probs=206.6

Q ss_pred             CEE-EEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           27 SVA-LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        27 ~~I-LVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ||| ||||||||||++|+++|++     +||+|++++|.+...             .....+++++.+|++|.+.+..++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~-----~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   75 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLE-----KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKII   75 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHH-----CcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHH
Confidence            578 9999999999999999999     899999999965321             011246889999999999999998


Q ss_pred             ccCCC--eeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           93 SQLTD--VTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        93 ~~~~~--V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      .+.++  |+|+++.+....  .++...+++|+.||.+++++|++.+ .+.++++++||..+       ||..  ...|++
T Consensus        76 ~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~v-------yg~~--~~~~~~  146 (347)
T d1t2aa_          76 NEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSEL-------YGKV--QEIPQK  146 (347)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-------TCSC--SSSSBC
T ss_pred             hhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchhe-------ecCC--CCCCCC
Confidence            87664  666654332221  2567778999999999999999874 34668888876554       4432  356889


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961          168 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  242 (397)
Q Consensus       168 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  242 (397)
                      |++|..|...  |+.     |+++..+. +.++++++++||+.|||+..+... ....+...+........++...|++.
T Consensus       147 E~~~~~P~~~--Yg~sK~~aE~~~~~~~-~~~~~~~~ilr~~~vyGp~~~~~~-~~~~~~~~i~~~~~~~~~~~~~g~g~  222 (347)
T d1t2aa_         147 ETTPFYPRSP--YGAAKLYAYWIVVNFR-EAYNLFAVNGILFNHESPRRGANF-VTRKISRSVAKIYLGQLECFSLGNLD  222 (347)
T ss_dssp             TTSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHHTSCSCEEESCTT
T ss_pred             CCCCCCCCCH--HHHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCCCCCCCc-cccccceeeehhhcCCcceeecCCCc
Confidence            9998877544  664     55555554 567899999999999994322111 11111111111111244566678888


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961          243 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  322 (397)
Q Consensus       243 ~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (397)
                      +.++++|+.|+   |.+++.++.+..  .+.|+++.+...++++....+...+|........         ..    ..+
T Consensus       223 ~~r~~i~v~D~---~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~----~~~  284 (347)
T d1t2aa_         223 AKRDWGHAKDY---VEAMWLMLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGK---------NE----NEV  284 (347)
T ss_dssp             CEECCEEHHHH---HHHHHHHHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESC---------GG----GCE
T ss_pred             ceeeeeEecHH---HHHHHHHhhcCC--Cccceeccccccccchhhhhhhhhhcceeeeccc---------ch----hhh
Confidence            77777776665   777777666533  3569999999999999999999999976432110         00    000


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHH
Q 015961          323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV  390 (397)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~  390 (397)
                      ....        ..+.....    ..+.+... .......+|++|+|+ |||+|+++++|+|+++|++.
T Consensus       285 ~~~~--------~~~~~~~~----~~~~~~rp-~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~  340 (347)
T d1t2aa_         285 GRCK--------ETGKVHVT----VDLKYYRP-TEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD  340 (347)
T ss_dssp             EEET--------TTCCEEEE----ECGGGSCS-SCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             hhhh--------hcCCceee----ecccCCCC-CCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            0000        00000000    00000000 001145579999986 69999999999999998653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.5e-34  Score=266.50  Aligned_cols=299  Identities=16%  Similarity=0.100  Sum_probs=203.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      +|++||||||||||+||+++|++     +||+|++++|..+..             ......++++.+|+++.+.+...+
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~   75 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLG-----KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWI   75 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHH-----CcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHH
Confidence            47999999999999999999999     899999999964310             011245779999999999998887


Q ss_pred             cc--CCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           93 SQ--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        93 ~~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      ..  +|.|+|+|+......  .++....+.|+.++.+++++++...   ....++++.|+..       +++..   ..+
T Consensus        76 ~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~-------~~~~~---~~~  145 (339)
T d1n7ha_          76 DVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-------MFGST---PPP  145 (339)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-------GGTTS---CSS
T ss_pred             hhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccce-------ecccC---CCC
Confidence            54  578999986533221  3677888999999999999997641   1233444444322       33432   456


Q ss_pred             CCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHHHhhhcCCCceecC
Q 015961          166 FTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAAVCKHEGIPLRFPG  239 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~g  239 (397)
                      .+|++|..|...  |+.     |+++..+. +.++++++++||++||||..+  ..+. ..+............+..+.|
T Consensus       146 ~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~--~~~~~~~i~~~~~~~~~~~~~~~~~g  220 (339)
T d1n7ha_         146 QSETTPFHPRSP--YAASKCAAHWYTVNYR-EAYGLFACNGILFNHESPRRG--ENFVTRKITRALGRIKVGLQTKLFLG  220 (339)
T ss_dssp             BCTTSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTSC--TTSHHHHHHHHHHHHHHTSCCCEEES
T ss_pred             CCCCCCCCCcch--hhHHHHHHHHHHHHHH-HHhCCCEEEEEEccccCCCCC--CCCCcchhhHHHHHHhcCCCCeEEeC
Confidence            789998877655  654     55655555 667899999999999995322  2221 122111111111233456678


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHH
Q 015961          240 TKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLA  319 (397)
Q Consensus       240 ~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  319 (397)
                      ++.+.++++++.|+   |.+++.++.++.  ...++++.+...++.++++.+.+.+|........           ... 
T Consensus       221 ~~~~~rd~~~v~D~---a~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----------~~~-  283 (339)
T d1n7ha_         221 NLQASRDWGFAGDY---VEAMWLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVE-----------IDQ-  283 (339)
T ss_dssp             CTTCEEECEEHHHH---HHHHHHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEE-----------ECG-
T ss_pred             CCCccccceeeehH---HHHHHHHHhcCC--CCccccccccccccchhhhhhhhhhhcccCceee-----------ecc-
Confidence            88877777777665   777776665543  3457777889999999999999999976432110           000 


Q ss_pred             HHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          320 EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                                      ....+..               ..++..|++|+++ |||+|+++++|+|+++++|+.+
T Consensus       284 ----------------~~~r~~~---------------~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~  326 (339)
T d1n7ha_         284 ----------------RYFRPAE---------------VDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE  326 (339)
T ss_dssp             ----------------GGSCSSC---------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ----------------CCCCCCC---------------CCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence                            0000100               0144579999986 6999999999999999999864

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-33  Score=258.32  Aligned_cols=288  Identities=13%  Similarity=0.074  Sum_probs=198.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEE
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFY  103 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~  103 (397)
                      +|||||||||||||++|+++|++     +|+.|++++++.             .+|+.|.+.+.+.++.  +|.|+|+|+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~-----~g~~vi~~~~~~-------------~~~~~~~~~~~~~~~~~~~d~v~~~a~   63 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQ-----RGDVELVLRTRD-------------ELNLLDSRAVHDFFASERIDQVYLAAA   63 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTT-----CTTEEEECCCTT-------------TCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHH-----CcCEEEEecCch-------------hccccCHHHHHHHHhhcCCCEEEEcch
Confidence            47899999999999999999999     899988776542             2688999988888765  566888764


Q ss_pred             ecccC---CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC---CC
Q 015961          104 VTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA---PN  177 (397)
Q Consensus       104 ~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~---~~  177 (397)
                      .....   ..++.+.+++|+.||.+++++|++.+  +++++++||..+|+..         ...|++|+.+....   +.
T Consensus        64 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--v~~~i~~SS~~vyg~~---------~~~~~~E~~~~~~~~~~~~  132 (315)
T d1e6ua_          64 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIYPKL---------AKQPMAESELLQGTLEPTN  132 (315)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGSCTT---------CCSSBCGGGTTSSCCCGGG
T ss_pred             hccccccchhhHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECCceEcCCC---------CCCCccCCccccCCCCCCC
Confidence            32211   12566778999999999999999864  8899998876666432         24456666543321   12


Q ss_pred             cchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc---chhHHHHHHHHH-HhhhcCCCceecCCccccceee
Q 015961          178 FYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAA-VCKHEGIPLRFPGTKAAWECYS  248 (397)
Q Consensus       178 ~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~-i~~~~~~~~~~~g~~~~~~~~~  248 (397)
                      ..|+.     |+++..+. ++.|++++++||++|||+.....   ......+..... .....+.++...|++.+.+++.
T Consensus       133 ~~Y~~sK~~~E~~~~~~~-~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~  211 (315)
T d1e6ua_         133 EPYAIAKIAGIKLCESYN-RQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL  211 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEE
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEE
Confidence            23664     56656554 66799999999999999543211   111222222211 1222355677788887777777


Q ss_pred             ecccHHHHHHHHHHHhcC--------CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961          249 IASDADLIAEHQIWAAVD--------PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  320 (397)
Q Consensus       249 ~~~da~~la~~~~~~~~~--------~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
                      ++.|+   +.++..+...        .......+|++.+...++.++++.+.+.+|.+......                
T Consensus       212 ~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~----------------  272 (315)
T d1e6ua_         212 HVDDM---AAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD----------------  272 (315)
T ss_dssp             EHHHH---HHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEE----------------
T ss_pred             Eeehh---HHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEEC----------------
Confidence            76665   5555544432        13345779999999999999999999999976422000                


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961          321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                                      ...+..               .....+|++|+|+|||+|+++++|+|+++++||+++
T Consensus       273 ----------------~~~~~~---------------~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         273 ----------------ASKPDG---------------TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             ----------------TTSCCC---------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             ----------------CCCCCC---------------CceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHHc
Confidence                            000000               003357999999999999999999999999999875

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=2.5e-33  Score=266.51  Aligned_cols=307  Identities=12%  Similarity=0.082  Sum_probs=201.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC------------------------CCCCCCCceEEEcc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP------------------------NWNADHLVEYVQCD   81 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~------------------------~~~~~~~v~~~~~D   81 (397)
                      .|||||||||||||++|+++|+++    .||+|+++++-...                        .......+.++.+|
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~----~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRD----TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH----CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHh----CCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECc
Confidence            358999999999999999999853    68999999751110                        00123467899999


Q ss_pred             CCCHHHHHHHHc---cCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccccccccc
Q 015961           82 VSDPEETQAKLS---QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        82 l~d~~~l~~~~~---~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                      ++|.+.+.++++   .+|.|+|+|+......  .++...+++|+.++.++++++++.+  ++.+++.++...|.+..  .
T Consensus        78 i~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~--~~~~~~~~s~~~~~~~~--~  153 (383)
T d1gy8a_          78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK--CDKIIFSSSAAIFGNPT--M  153 (383)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGTBSCC--C
T ss_pred             ccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC--Ccccccccccccccccc--c
Confidence            999999988886   4577999876533221  2566778999999999999999864  56677677666665442  1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc--------hhHHHH-H
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM--------NLVGAL-C  222 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~--------~~~~~~-~  222 (397)
                      ........++.|+.+..|...  |+.     |+++.++. +.+|++++++||+++||+......        +....+ .
T Consensus       154 ~~~~~~~~~~~e~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~  230 (383)
T d1gy8a_         154 GSVSTNAEPIDINAKKSPESP--YGESKLIAERMIRDCA-EAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG  230 (383)
T ss_dssp             -----CCCCBCTTSCCBCSSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred             ccccccccccccccCCCCCCH--HHhhHhHHHHHHHHHH-HHhCCCEEEEecceeeccCccccccccccccchhHHHHHH
Confidence            111123456777777766544  664     56666554 667999999999999996432110        111111 1


Q ss_pred             HHHH-Hh--------h--hcCCCceecC------CccccceeeecccHHHHHHHHHHHhcC--------CCCCCCceecc
Q 015961          223 VYAA-VC--------K--HEGIPLRFPG------TKAAWECYSIASDADLIAEHQIWAAVD--------PYAKNEAFNCN  277 (397)
Q Consensus       223 ~~~~-i~--------~--~~~~~~~~~g------~~~~~~~~~~~~da~~la~~~~~~~~~--------~~~~g~~yni~  277 (397)
                      ..+. ..        .  ..+.++...|      ++.+.++++|+.|+   |++++.+...        ....+++|||+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~---~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~  307 (383)
T d1gy8a_         231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDL---ASAHILALDYVEKLGPNDKSKYFSVFNLG  307 (383)
T ss_dssp             HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHH---HHHHHHHHHHHHTCCTTTGGGSEEEEEES
T ss_pred             HHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHH---HHHHHHHHhhhccccccccccCccEEEeC
Confidence            1110 00        0  0123333333      34555666766665   5555444321        23346799999


Q ss_pred             CCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhc
Q 015961          278 NGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLT  357 (397)
Q Consensus       278 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (397)
                      +++.+|+.|+++.+.+.+|.+......                                ...+..               
T Consensus       308 s~~~~s~~el~~~i~~~~~~~~~~~~~--------------------------------~~~~~d---------------  340 (383)
T d1gy8a_         308 TSRGYSVREVIEVARKTTGHPIPVREC--------------------------------GRREGD---------------  340 (383)
T ss_dssp             CSCCEEHHHHHHHHHHHHCCCCCEEEE--------------------------------CCCTTC---------------
T ss_pred             CCCceeHHHHHHHHHHHhCCCCceEEC--------------------------------CCCCCC---------------
Confidence            999999999999999999976432100                                000000               


Q ss_pred             CcccccchhhHHH-cCCCCccCCHHHHHHH-HHHHhcC
Q 015961          358 GEAKLASMNKSKE-HGFSGFRNSKNSFITW-IDKVKGF  393 (397)
Q Consensus       358 ~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~-~~~~~~~  393 (397)
                      .....+|++|+++ |||+|+++++|+|+++ +.|++..
T Consensus       341 ~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         341 PAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             cCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            0134579999997 7999999999999886 6899876

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.6e-32  Score=261.84  Aligned_cols=311  Identities=16%  Similarity=0.069  Sum_probs=200.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC------------CCCCC------------CCCCCceEEEcc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR------------PKPNW------------NADHLVEYVQCD   81 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~------------~~~~~------------~~~~~v~~~~~D   81 (397)
                      +|||||||||||||++|+++|++     +||+|++++.-            .....            ....+++++.+|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~-----~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D   75 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSK-----KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   75 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEcc
Confidence            57999999999999999999999     89999999621            00000            012578999999


Q ss_pred             CCCHHHHHHHHccC--CCeeEEEEecccCC-----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccccccc
Q 015961           82 VSDPEETQAKLSQL--TDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFE  154 (397)
Q Consensus        82 l~d~~~l~~~~~~~--~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~  154 (397)
                      |+|.+.+..++.++  |.|+|+|+......     ..+...+++|+.||.|++++|++.+. ..++++.|+..+|+....
T Consensus        76 l~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~-~~~~i~~ss~~~~~~~~~  154 (393)
T d1i24a_          76 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTMGEYGTPNI  154 (393)
T ss_dssp             TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCGGGGCCCSS
T ss_pred             CCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhcc-ccceeecccccccccccc
Confidence            99999999999875  67999986533221     13556789999999999999998753 456666776666643210


Q ss_pred             c----cCCCCCCCCCC--CCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcch-------
Q 015961          155 A----FGKIKPYDPPF--TEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN-------  216 (397)
Q Consensus       155 ~----~g~~~~~~~~~--~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~-------  216 (397)
                      .    ++..  .+...  ++..|..|  ...|+.     |+++..+. ++.+++++++||+.|||+.......       
T Consensus       155 ~~~~~~~~~--~~~~~~~~~~~~~~p--~~~Y~~sK~~aE~~~~~~~-~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~  229 (393)
T d1i24a_         155 DIEEGYITI--THNGRTDTLPYPKQA--SSFYHLSKVHDSHNIAFTC-KAWGIRATDLNQGVVYGVKTDETEMHEELRNR  229 (393)
T ss_dssp             CBCSSEEEE--EETTEEEEEECCCCC--CSHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECSCCTTGGGSGGGCCC
T ss_pred             ccccccccc--ccccccccccccccc--ccHHHHHhhhhcccccccc-cccceeeeecccccccCCCccccccccccccc
Confidence            0    0000  00000  11123333  334775     45555444 6778999999999999964321110       


Q ss_pred             -----h-HHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceec-cCCCeeehHHHHH
Q 015961          217 -----L-VGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNC-NNGDVFKWKHLWK  289 (397)
Q Consensus       217 -----~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni-~~~~~~s~~el~~  289 (397)
                           . ...+..++. ....+.++.+.|++.+.++++|+.|+   +.+++.++.+....++.+.+ .+++.+|++|+++
T Consensus       230 ~~~~~~~~~~i~~~~~-~~~~~~~~~i~g~~~~~rd~v~v~D~---~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~  305 (393)
T d1i24a_         230 LDYDAVFGTALNRFCV-QAAVGHPLTVYGKGGQTRGYLDIRDT---VQCVEIAIANPAKAGEFRVFNQFTEQFSVNELAS  305 (393)
T ss_dssp             CCCSTTTCCHHHHHHH-HHHHTCCEEEETTSCCEEEEEEHHHH---HHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHH
T ss_pred             cccccccccchhhhhH-HhhcCCeeEEeeecccccccccccch---HHHHHHHHHhhcccceeeeecCCCCeeEHHHHHH
Confidence                 0 001112221 12246787878888887777777665   77777777666665553332 3457799999999


Q ss_pred             HHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHH
Q 015961          290 VLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK  369 (397)
Q Consensus       290 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  369 (397)
                      .+.+..+.....+..         ....                     .+..-.            ....+..|++|++
T Consensus       306 ~i~~~~~~~~~~~~~---------~~~~---------------------~~~~~~------------~~~~~~~d~~k~~  343 (393)
T d1i24a_         306 LVTKAGSKLGLDVKK---------MTVP---------------------NPRVEA------------EEHYYNAKHTKLM  343 (393)
T ss_dssp             HHHHHHHTTTCCCCE---------EEEC---------------------CSSCSC------------SSCCCCBCCCHHH
T ss_pred             HHHHHHHhhCCCcce---------eecc---------------------CCCCCC------------CccEecCCHHHHH
Confidence            998876543222111         0000                     000000            0013457999999


Q ss_pred             HcCCCCccCCHHHHHHHHHHHhcC
Q 015961          370 EHGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       370 ~lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      +|||+|+++++++++++++|+++.
T Consensus       344 ~LGw~P~~~~~~~i~~~~~~~~~~  367 (393)
T d1i24a_         344 ELGLEPHYLSDSLLDSLLNFAVQF  367 (393)
T ss_dssp             HTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             HcCCccccCHHHHHHHHHHHHHHH
Confidence            999999999999999999998765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.8e-32  Score=255.59  Aligned_cols=306  Identities=15%  Similarity=0.142  Sum_probs=201.2

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHccC--CCe
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQL--TDV   98 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V   98 (397)
                      ||||||||||||++|+++|++     +||+|+++++-....       ....++++++.+|++|.+.+.++++++  |.|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~-----~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALS-----QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHH-----CcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceE
Confidence            799999999999999999999     899999998632221       112368999999999999999999876  679


Q ss_pred             eEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccc-cCCC------CCCCCCCCCC
Q 015961           99 THIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEA-FGKI------KPYDPPFTED  169 (397)
Q Consensus        99 ~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~-~g~~------~~~~~~~~E~  169 (397)
                      +|+|+......  .++...+++|+.||.||+++|.+.+. .+++++.|+..+|...... ....      ........+.
T Consensus        77 ih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~-~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (338)
T d1orra_          77 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNS-NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES  155 (338)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred             EeecccccccccccChHHHHHHHHHHHHHHHHhhhcccc-cccccccccccccccccccccccccccccccccccCcccC
Confidence            99987543322  26788899999999999999998642 3344444433333321000 0000      0000111222


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC--cchhHHHHHHHH-HHhhhcCCCceecCCc
Q 015961          170 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS--LMNLVGALCVYA-AVCKHEGIPLRFPGTK  241 (397)
Q Consensus       170 ~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~-~i~~~~~~~~~~~g~~  241 (397)
                      .+..|  ...|+.     |.++..+. +..+...+++|+..+||+....  .......+...+ ......+.++.+.|++
T Consensus       156 ~~~~~--~~~y~~~k~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  232 (338)
T d1orra_         156 TQLDF--HSPYGCSKGAADQYMLDYA-RIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG  232 (338)
T ss_dssp             SCCCC--CHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred             Ccccc--ccccccccchhhhhhhhhh-hccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCC
Confidence            22222  233553     44444444 6678999999999999843221  112222222221 2233346778888988


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCC-CCCCCceeccC--CCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCH
Q 015961          242 AAWECYSIASDADLIAEHQIWAAVDP-YAKNEAFNCNN--GDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL  318 (397)
Q Consensus       242 ~~~~~~~~~~da~~la~~~~~~~~~~-~~~g~~yni~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  318 (397)
                      .+.++++|+.|+   +.+++.++.+. ...+++||+..  +..+++.|++..+.+.+|.+.....            .  
T Consensus       233 ~~~r~~~~v~D~---~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~------------~--  295 (338)
T d1orra_         233 KQVRDVLHAEDM---ISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTN------------L--  295 (338)
T ss_dssp             CCEEECEEHHHH---HHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEE------------E--
T ss_pred             ceeEeeecccch---hhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEe------------C--
Confidence            888777777665   66766665542 35678899854  4568999999999999987643210            0  


Q ss_pred             HHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          319 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                                        ...+..  .             ..+..|++|+|+ |||+|.++++|+|+++++|+|.
T Consensus       296 ------------------~~~~~~--~-------------~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         296 ------------------PVRESD--Q-------------RVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             ------------------CCCSSC--C-------------SEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ------------------CCCCCC--c-------------CeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence                              000100  0             134579999986 7999999999999999999985

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.97  E-value=3.2e-31  Score=249.26  Aligned_cols=298  Identities=15%  Similarity=0.067  Sum_probs=192.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHccC--C
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQL--T   96 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~~~--~   96 (397)
                      .+|||||||||||||++|+++|++     .||+|++++|......      ...++++++.+|++|++.+.+++..+  +
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~   81 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQT-----MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPE   81 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhh
Confidence            358999999999999999999999     8999999999765321      12357999999999999999888765  4


Q ss_pred             CeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        97 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      .|+|+|+.....  ..++...+++|+.|+.+++++|++.+. ...+++.|+..+|..        .....+..|+.+..|
T Consensus        82 ~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~-~~~~~~~s~~~~~~~--------~~~~~~~~~~~~~~p  152 (356)
T d1rkxa_          82 IVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG-VKAVVNITSDKCYDN--------KEWIWGYRENEAMGG  152 (356)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCC-CCEEEEECCGGGBCC--------CCSSSCBCTTSCBCC
T ss_pred             hhhhhhccccccccccCCccccccccccchhhhhhhhcccc-ccccccccccccccc--------cccccccccccccCC
Confidence            478876543221  126788899999999999999998643 444444443322221        112445666666666


Q ss_pred             CCCcchhH-----HHHHHHHH--------hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCc
Q 015961          175 APNFYYTL-----EDILFEEV--------EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK  241 (397)
Q Consensus       175 ~~~~~y~~-----e~~l~~~~--------~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~  241 (397)
                      ...  |+.     |..+..+.        ....++.++++||+.+||+.......+...+.     ....+......+.+
T Consensus       153 ~~~--y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~-----~~~~~~~~~~~~~~  225 (356)
T d1rkxa_         153 YDP--YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDIL-----RAFEQSQPVIIRNP  225 (356)
T ss_dssp             SSH--HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHH-----HHHHTTCCEECSCT
T ss_pred             CCc--cccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHH-----HHHhCCCceEEeec
Confidence            544  443     33333221        01346899999999999953322223322221     11123333446666


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCC----CCCC--ceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 015961          242 AAWECYSIASDADLIAEHQIWAAVDPY----AKNE--AFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR  315 (397)
Q Consensus       242 ~~~~~~~~~~da~~la~~~~~~~~~~~----~~g~--~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~  315 (397)
                      .+.+.++|+.|+   +.+++.++....    ..+.  .++...+..++++++++.+.+.+|........           
T Consensus       226 ~~~~~~~~v~D~---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------  291 (356)
T d1rkxa_         226 HAIRPWQHVLEP---LSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLD-----------  291 (356)
T ss_dssp             TCEECCEETHHH---HHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC------------
T ss_pred             cccccccccccc---cchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEc-----------
Confidence            666667766665   555554443321    1222  33334456799999999999999876432100           


Q ss_pred             cCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961          316 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  392 (397)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~  392 (397)
                      .                    ...+...               ..+..|++|+|+ |||+|+++++|+|+++++||++
T Consensus       292 ~--------------------~~~~~~~---------------~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         292 G--------------------NAHPHEA---------------HYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             --------------------------CC---------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             C--------------------CCCCCCc---------------CeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            0                    0001110               134579999986 7999999999999999999885

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.97  E-value=6.5e-31  Score=245.93  Aligned_cols=304  Identities=17%  Similarity=0.160  Sum_probs=191.6

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHH
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQA   90 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~   90 (397)
                      -+..+.+|+|||||||||||++|+++|++     +||+|++++|+....         .........+.+|+.|.+++.+
T Consensus         5 ~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~-----~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   79 (342)
T d1y1pa1           5 NAVLPEGSLVLVTGANGFVASHVVEQLLE-----HGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE   79 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred             CCCCCCcCEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhh
Confidence            44556689999999999999999999999     899999999964211         0011233467899999999999


Q ss_pred             HHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC-
Q 015961           91 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED-  169 (397)
Q Consensus        91 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~-  169 (397)
                      ++.+++.|+|+++.... ..++...+++|+.||.|++++|++. ..+++++++||..++....    + .......+|+ 
T Consensus        80 ~~~~~~~v~~~a~~~~~-~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~~~~----~-~~~~~~~~e~~  152 (342)
T d1y1pa1          80 VIKGAAGVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPK----P-NVEGIYLDEKS  152 (342)
T ss_dssp             TTTTCSEEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCC----T-TCCCCEECTTC
T ss_pred             hcccchhhhhhcccccc-cccccccccchhhhHHHHHHhhhcc-cccccccccccceeeccCC----C-CCCCccccccc
Confidence            99999989998765332 2356777899999999999999885 3588999888754332110    0 0001112222 


Q ss_pred             ---------------CCCCCCCCcchhH-----HHHHHHHHh-cCCCeeEEEEcCCceeeccCCC--cchhHHHHHHHHH
Q 015961          170 ---------------MPRLDAPNFYYTL-----EDILFEEVE-KKEELSWSVHRPDTIFGFSPYS--LMNLVGALCVYAA  226 (397)
Q Consensus       170 ---------------~p~~~~~~~~y~~-----e~~l~~~~~-~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~  226 (397)
                                     .+..|  ...|+.     |+++..+.. ...+++++++||+.+||+..+.  .......+  ...
T Consensus       153 ~~~~~~~~~~~~~e~~~~~p--~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~--~~~  228 (342)
T d1y1pa1         153 WNLESIDKAKTLPESDPQKS--LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGW--MMS  228 (342)
T ss_dssp             CCHHHHHHHHHSCTTSTTHH--HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHH--HHH
T ss_pred             cccccccccccccccCCCCC--cCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHH--HHH
Confidence                           22222  223665     444444441 1345889999999999964321  11111111  111


Q ss_pred             HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchh
Q 015961          227 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEE  306 (397)
Q Consensus       227 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~  306 (397)
                      +.+  +...... .+.+.++++|+.|   +|.+++.++.++...++ ||+++++.+|++|+++.|.+.++....+..   
T Consensus       229 l~~--g~~~~~~-~~~~~~~~v~v~D---va~~~i~~l~~~~~~g~-~~~~~~~~~t~~eia~~i~k~~p~~~~~~~---  298 (342)
T d1y1pa1         229 LFN--GEVSPAL-ALMPPQYYVSAVD---IGLLHLGCLVLPQIERR-RVYGTAGTFDWNTVLATFRKLYPSKTFPAD---  298 (342)
T ss_dssp             HHT--TCCCHHH-HTCCSEEEEEHHH---HHHHHHHHHHCTTCCSC-EEEECCEEECHHHHHHHHHHHCTTSCCCCC---
T ss_pred             HHc--CCcCccc-CCccceeeeeHHH---HHHHHHHhhcCccccce-EEEEcCCceEHHHHHHHHHHHcCCCcCCcc---
Confidence            222  3222211 1223345665554   57777777777666555 678888999999999999998743222110   


Q ss_pred             hcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHH
Q 015961          307 EEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITW  386 (397)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~  386 (397)
                               .                    .-.....   ..+          +...+.+++|.+||.|.++++|+|+++
T Consensus       299 ---------~--------------------~~~~~~~---~~~----------~~~~s~~~~k~lg~~~~~~lee~i~d~  336 (342)
T d1y1pa1         299 ---------F--------------------PDQGQDL---SKF----------DTAPSLEILKSLGRPGWRSIEESIKDL  336 (342)
T ss_dssp             ---------C--------------------CCCCCCC---CEE----------CCHHHHHHHHHTTCCSCCCHHHHHHHH
T ss_pred             ---------C--------------------CccCccc---ccc----------cchHHHHHHHHcCCCCCcCHHHHHHHH
Confidence                     0                    0000000   000          222466777889999999999999999


Q ss_pred             HHHHh
Q 015961          387 IDKVK  391 (397)
Q Consensus       387 ~~~~~  391 (397)
                      ++.++
T Consensus       337 I~s~~  341 (342)
T d1y1pa1         337 VGSET  341 (342)
T ss_dssp             HCCSC
T ss_pred             HHhCc
Confidence            97654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.96  E-value=2.1e-29  Score=228.63  Aligned_cols=274  Identities=15%  Similarity=0.089  Sum_probs=185.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC--CCeeEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYV  104 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V~h~a~~  104 (397)
                      |||||||||||||++|+++|.+     +||+|++++|+.              +|+.|.+++.+.+++.  |.|+|+|+.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~-----~g~~Vi~~~r~~--------------~D~~d~~~~~~~l~~~~~d~vih~a~~   62 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKG-----KNVEVIPTDVQD--------------LDITNVLAVNKFFNEKKPNVVINCAAH   62 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTT-----SSEEEEEECTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCEEEEeechh--------------ccCCCHHHHHHHHHHcCCCEEEeeccc
Confidence            5799999999999999999998     899999999862              5899999999988754  669998664


Q ss_pred             cccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          105 TWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       105 ~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      .....  ..+......|+..+.++++.++..   ...+++.|+..+|.+.         ...+..|+++..+..  .|+.
T Consensus        63 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~---~~~~~~~ss~~v~~~~---------~~~~~~e~~~~~~~~--~~~~  128 (281)
T d1vl0a_          63 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGE---------AKEPITEFDEVNPQS--AYGK  128 (281)
T ss_dssp             CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSC---------CSSCBCTTSCCCCCS--HHHH
T ss_pred             cccccccccchhhcccccccccccccccccc---cccccccccceeeecc---------ccccccccccccchh--hhhh
Confidence            33222  255677889999999999988875   3445545544444321         245677877765543  3666


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961          183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  262 (397)
Q Consensus       183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~  262 (397)
                      ++...+.+.++.+.+.+++||++|||++.    ++...+.   .... .+.++...+  .+.+.++++.|   ++.++..
T Consensus       129 ~k~~~e~~~~~~~~~~~i~R~~~vyG~~~----~~~~~~~---~~~~-~~~~~~~~~--~~~~~~i~v~D---~~~~~~~  195 (281)
T d1vl0a_         129 TKLEGENFVKALNPKYYIVRTAWLYGDGN----NFVKTMI---NLGK-THDELKVVH--DQVGTPTSTVD---LARVVLK  195 (281)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEECSEESSSS----CHHHHHH---HHHH-HCSEEEEES--SCEECCEEHHH---HHHHHHH
T ss_pred             hhhHHHHHHHHhCCCccccceeEEeCCCc----ccccchh---hhhc-cCCceeecC--Cceeccchhhh---hhhhhhh
Confidence            55555544456678999999999999432    2222221   1111 233434343  34445555544   4777777


Q ss_pred             HhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCccc
Q 015961          263 AAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTR  342 (397)
Q Consensus       263 ~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (397)
                      ++.+..  .++||+++++.+|+.|+++.+++.+|.+....            +++-               ++++...  
T Consensus       196 ~~~~~~--~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~------------~i~~---------------~~~~~~a--  244 (281)
T d1vl0a_         196 VIDEKN--YGTFHCTCKGICSWYDFAVEIFRLTGIDVKVT------------PCTT---------------EEFPRPA--  244 (281)
T ss_dssp             HHHHTC--CEEEECCCBSCEEHHHHHHHHHHHHCCCCEEE------------EECS---------------TTSCCSS--
T ss_pred             hhhhcc--cCceeEeCCCccchHHHHHHHHHHhCCCceEE------------eccH---------------HHcCCcC--
Confidence            665432  35899999999999999999999999874321            1110               0011000  


Q ss_pred             ccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHh
Q 015961          343 LDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  391 (397)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~  391 (397)
                       .+  .          .+.++|++|+++ +||+|. +++|+|+++++++|
T Consensus       245 -~r--p----------~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         245 -KR--P----------KYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             -CC--C----------SBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             -CC--c----------cccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence             00  0          023479999997 599976 89999999999987

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.4e-28  Score=225.58  Aligned_cols=291  Identities=11%  Similarity=0.093  Sum_probs=160.9

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHH-HHc-----cCCCeeEE
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQA-KLS-----QLTDVTHI  101 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~-~~~-----~~~~V~h~  101 (397)
                      |||||||||||++|+++|++     +|+ +|+++++-...... ....+....|..+.+++.. .+.     .++.|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~-----~g~~~V~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   75 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGTKF-VNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHT-----TTCCCEEEEECCSSGGGG-HHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHh-----CCCCeEEEEECCCCcchh-hcccccchhhhccchHHHHHHhhhhcccchhhhhhh
Confidence            89999999999999999999     785 69998753321100 0011112233333333322 222     23336666


Q ss_pred             EEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh
Q 015961          102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  181 (397)
Q Consensus       102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~  181 (397)
                      |+.......+.....+.|+.++.+++++++..+  ++++++.| ..+|.      ++   ...+..++.+..|...  |+
T Consensus        76 aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--i~~v~~ss-~~~~~------~~---~~~~~~~~~~~~~~~~--Y~  141 (307)
T d1eq2a_          76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--IPFLYASS-AATYG------GR---TSDFIESREYEKPLNV--YG  141 (307)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT--CCEEEEEE-GGGGT------TC---CSCBCSSGGGCCCSSH--HH
T ss_pred             ccccccccccccccccccccccccccccccccc--cccccccc-ccccc------cc---cccccccccccccccc--cc
Confidence            544344445677788999999999999999864  44444333 22222      21   1223334444334333  55


Q ss_pred             H-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH-HhhhcCCCceecCCccccceeeecccHHH
Q 015961          182 L-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA-VCKHEGIPLRFPGTKAAWECYSIASDADL  255 (397)
Q Consensus       182 ~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~g~~~~~~~~~~~~da~~  255 (397)
                      .     |+++..+. ++.+++++++||+.+||+...........+..+.. +.. ...+..+.|++...+++.++.|+  
T Consensus       142 ~~K~~~e~~~~~~~-~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~r~~~~v~d~--  217 (307)
T d1eq2a_         142 YSKFLFDEYVRQIL-PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNN-GESPKLFEGSENFKRDFVYVGDV--  217 (307)
T ss_dssp             HHHHHHHHHHHHHG-GGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC--------------CBCEEEHHHH--
T ss_pred             cccchhhhhccccc-cccccccccccceeEeecccccccccccccccccccccc-ccceeeecCccceeeeeeecccH--
Confidence            3     66666665 77899999999999999533211111011111111 121 12233445777767778877776  


Q ss_pred             HHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHH
Q 015961          256 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRE  335 (397)
Q Consensus       256 la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (397)
                       +.++..+..+  ...+.||+++++..|++|+++++.+..+.....+.           +.+  +          .    
T Consensus       218 -~~~~~~~~~~--~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~-----------~~~--~----------~----  267 (307)
T d1eq2a_         218 -ADVNLWFLEN--GVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYI-----------PFP--D----------K----  267 (307)
T ss_dssp             -HHHHHHHHHH--CCCEEEEESCSCCBCHHHHHHHC--------------------------------------------
T ss_pred             -HHHHHHHhhh--ccccccccccccchhHHHHHHHHHHhcCCCCeeEe-----------eCC--c----------c----
Confidence             5555554443  24568999999999999999999876653221110           000  0          0    


Q ss_pred             hCCCcccccccccchhhhhhhcCcccccchhhHHHc-CCCCccCCHHHHHHHHHHH
Q 015961          336 NQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEH-GFSGFRNSKNSFITWIDKV  390 (397)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~l-G~~p~~~~~e~~~~~~~~~  390 (397)
                        .....               ......|++|++++ ||+|.++++|||+++++|+
T Consensus       268 --~~~~~---------------~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         268 --LKGRY---------------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             ------C---------------CCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred             --CCCCC---------------ceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence              00000               00223599999985 9999999999999999996

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.94  E-value=6e-27  Score=213.82  Aligned_cols=290  Identities=13%  Similarity=0.066  Sum_probs=176.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC--CCeeEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYV  104 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V~h~a~~  104 (397)
                      |||||||||||||++|+++|.+     .|+. ++++++...          +.+|++|.+.+.+.++++  |.|+|+|+.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~-----~g~~-v~~~~~~~~----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAP-----VGNL-IALDVHSKE----------FCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTT-----TSEE-EEECTTCSS----------SCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCE-EEEECCCcc----------ccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            4799999999999999999998     6764 455554321          257999999999988765  779999875


Q ss_pred             cccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961          105 TWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  182 (397)
Q Consensus       105 ~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~  182 (397)
                      +...  ..++...++.|+.++.+|+++|++.+   .++++.||..+|..         ....|.+|+.+..|...  |+.
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~~ss~~~~~~---------~~~~~~~E~~~~~p~~~--y~~  130 (298)
T d1n2sa_          65 TAVDKAESEPELAQLLNATSVEAIAKAANETG---AWVVHYSTDYVFPG---------TGDIPWQETDATSPLNV--YGK  130 (298)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT---CEEEEEEEGGGSCC---------CTTCCBCTTSCCCCSSH--HHH
T ss_pred             ccccccccCccccccccccccccchhhhhccc---cccccccccccccC---------CCCCCCccccccCCCch--Hhh
Confidence            4332  34677888999999999999998764   34444554443322         13567889888766544  555


Q ss_pred             HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961          183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  262 (397)
Q Consensus       183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~  262 (397)
                      .+...+...........++|++..++. .+.  +....+...   .. .+.++...+  .++....++.|+.+....++.
T Consensus       131 ~k~~~e~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~---~~-~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~  201 (298)
T d1n2sa_         131 TKLAGEKALQDNCPKHLIFRTSWVYAG-KGN--NFAKTMLRL---AK-ERQTLSVIN--DQYGAPTGAELLADCTAHAIR  201 (298)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEECSEECS-SSC--CHHHHHHHH---HH-HCSEEEEEC--SCEECCEEHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHHhhhcccccccccceeec-cCC--ccchhhhhh---hc-ccceeeccc--ceeecccccchHHHHHHHHHh
Confidence            444433322222334455665555542 221  111112111   11 133333333  234455555555333333343


Q ss_pred             HhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCccc
Q 015961          263 AAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTR  342 (397)
Q Consensus       263 ~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (397)
                      .+......+++||+++++.+++.|+++.+.+..+........+      ...+.+-               .+++..   
T Consensus       202 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------~~~~i~~---------------~~~~~~---  257 (298)
T d1n2sa_         202 VALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALT------ELNAVPT---------------SAYPTP---  257 (298)
T ss_dssp             HHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCC------EEEEECS---------------TTSCCS---
T ss_pred             hhhccccccccccccCCCceecHHHHHHHHhhhhccCcccccc------ceeeeeh---------------hhcCcc---
Confidence            3333445678999999999999999999988776543221110      0000000               000000   


Q ss_pred             ccccccchhhhhhhcCc-ccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961          343 LDEVGAWWFVDLVLTGE-AKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  393 (397)
Q Consensus       343 ~~~~~~~~~~~~~~~~~-~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~  393 (397)
                      .             .++ +.++|++|+++ +||+|+ +++++|+++++++...
T Consensus       258 a-------------~RP~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~  296 (298)
T d1n2sa_         258 A-------------SRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTT  296 (298)
T ss_dssp             S-------------CCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred             C-------------CCccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence            0             001 33579999987 699986 8999999999998754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.91  E-value=4e-25  Score=202.79  Aligned_cols=233  Identities=14%  Similarity=0.109  Sum_probs=157.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      ++||||||||||||++|+++|++     .||+|++++|++....         ....+++++++|+.|.+.+...+.+++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~-----~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~   77 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASIS-----LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD   77 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHH-----TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcc
Confidence            46799999999999999999999     8999999999764321         123579999999999999999999998


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  176 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~  176 (397)
                      .++|+++...         ...|..++.+++++|.+.. ..+++ +.|+          +|.     .+..+..+..+. 
T Consensus        78 ~~~~~~~~~~---------~~~~~~~~~~~l~~a~~~~-~~~~v-~~Ss----------~g~-----~~~~~~~~~~~~-  130 (312)
T d1qyda_          78 VVISALAGGV---------LSHHILEQLKLVEAIKEAG-NIKRF-LPSE----------FGM-----DPDIMEHALQPG-  130 (312)
T ss_dssp             EEEECCCCSS---------SSTTTTTHHHHHHHHHHSC-CCSEE-ECSC----------CSS-----CTTSCCCCCSST-
T ss_pred             hhhhhhhhcc---------cccchhhhhHHHHHHHHhc-CCcEE-EEee----------ccc-----cCCCcccccchh-
Confidence            8888754221         1346667778888888753 23343 3342          221     111222222222 


Q ss_pred             CcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHH
Q 015961          177 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLI  256 (397)
Q Consensus       177 ~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~l  256 (397)
                      ..++..++.+.++. +..+++++++||+.+||+..+.........       ...+.++.+++++.+.+.++++.|   +
T Consensus       131 ~~~~~~~~~~~~~~-~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~i~v~D---v  199 (312)
T d1qyda_         131 SITFIDKRKVRRAI-EAASIPYTYVSSNMFAGYFAGSLAQLDGHM-------MPPRDKVLIYGDGNVKGIWVDEDD---V  199 (312)
T ss_dssp             THHHHHHHHHHHHH-HHTTCCBCEEECCEEHHHHTTTSSCTTCCS-------SCCSSEECCBTTSCSEEEEECHHH---H
T ss_pred             hhhhHHHHHHHHhh-cccccceEEeccceeecCCccchhhHHHHh-------hhcccccccccccccccceeeHHH---H
Confidence            22233455555554 678899999999999996443322211111       011334556777776666666655   4


Q ss_pred             HHHHHHHhcCCCCCCCc-eeccCCCeeehHHHHHHHHHHhCCCCCC
Q 015961          257 AEHQIWAAVDPYAKNEA-FNCNNGDVFKWKHLWKVLAEQFGIEDYG  301 (397)
Q Consensus       257 a~~~~~~~~~~~~~g~~-yni~~~~~~s~~el~~~i~~~~g~~~~~  301 (397)
                      |++++.++.++...++. |++++++.+|++|+++.+++.+|.+...
T Consensus       200 a~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~  245 (312)
T d1qyda_         200 GTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDK  245 (312)
T ss_dssp             HHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             HHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeE
Confidence            88888888776666665 5666677899999999999999987654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.90  E-value=8.1e-25  Score=199.79  Aligned_cols=227  Identities=13%  Similarity=0.130  Sum_probs=150.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC----------CCCCceEEEccCCCHHHHHHHHcc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----------ADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~----------~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      ++|||||||||||||++|+++|++     .||+|++++|++.....          ...+++++.+|+.+...+...+.+
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   76 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLD-----LGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN   76 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHH-----TTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhh
Confidence            468999999999999999999998     89999999997654311          134788999999999999999999


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  174 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~  174 (397)
                      ++.|+|+++.             .+..++.++++++...+  .+++++.|+          ++.      +..+... ..
T Consensus        77 ~~~vi~~~~~-------------~~~~~~~~~~~a~~~~~--~~~~~~~s~----------~~~------~~~~~~~-~~  124 (307)
T d1qyca_          77 VDVVISTVGS-------------LQIESQVNIIKAIKEVG--TVKRFFPSE----------FGN------DVDNVHA-VE  124 (307)
T ss_dssp             CSEEEECCCG-------------GGSGGGHHHHHHHHHHC--CCSEEECSC----------CSS------CTTSCCC-CT
T ss_pred             ceeeeecccc-------------cccchhhHHHHHHHHhc--cccceeeec----------ccc------ccccccc-cc
Confidence            9888887532             23334556778777654  455554442          111      0011111 11


Q ss_pred             CCCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 015961          175 APNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD  254 (397)
Q Consensus       175 ~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~  254 (397)
                      ....++........+. .+.+++++++||+.+||+.......+....        ..+..+..++.+.+.+.++++.|  
T Consensus       125 ~~~~~~~~~~~~~~~~-~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~v~D--  193 (307)
T d1qyca_         125 PAKSVFEVKAKVRRAI-EAEGIPYTYVSSNCFAGYFLRSLAQAGLTA--------PPRDKVVILGDGNARVVFVKEED--  193 (307)
T ss_dssp             THHHHHHHHHHHHHHH-HHHTCCBEEEECCEEHHHHTTTTTCTTCSS--------CCSSEEEEETTSCCEEEEECHHH--
T ss_pred             cccccccccccccchh-hccCCCceecccceecCCCccchhhhhhhh--------hhcccceeeecccccccCCcHHH--
Confidence            1111122233333333 567899999999999996433222211111        11334556777776666666555  


Q ss_pred             HHHHHHHHHhcCCCCCCC-ceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961          255 LIAEHQIWAAVDPYAKNE-AFNCNNGDVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       255 ~la~~~~~~~~~~~~~g~-~yni~~~~~~s~~el~~~i~~~~g~~~~  300 (397)
                       +|.+++.++.++...++ +||+++++.+|+.|+++.+.+.+|.+..
T Consensus       194 -va~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~  239 (307)
T d1qyca_         194 -IGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE  239 (307)
T ss_dssp             -HHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred             -HHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCc
Confidence             58888877766655555 4667778899999999999999998754

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-22  Score=174.38  Aligned_cols=198  Identities=12%  Similarity=0.037  Sum_probs=133.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~  105 (397)
                      |||+||||||+||++++++|++     +||+|++++|++.+. .....+++++.+|++|.+++.++++++|.|+|+++..
T Consensus         4 kkIlV~GatG~iG~~v~~~Ll~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~   78 (205)
T d1hdoa_           4 KKIAIFGATGQTGLTTLAQAVQ-----AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (205)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccC
Confidence            6899999999999999999999     899999999987543 2234689999999999999999999999999986532


Q ss_pred             ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961          106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  185 (397)
Q Consensus       106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~  185 (397)
                      .   .  ....+++..+++++++++++++  +++++++|+...|..+               +..   +.....|..++.
T Consensus        79 ~---~--~~~~~~~~~~~~~l~~aa~~~~--v~r~i~~ss~~~~~~~---------------~~~---~~~~~~~~~~~~  133 (205)
T d1hdoa_          79 N---D--LSPTTVMSEGARNIVAAMKAHG--VDKVVACTSAFLLWDP---------------TKV---PPRLQAVTDDHI  133 (205)
T ss_dssp             T---C--CSCCCHHHHHHHHHHHHHHHHT--CCEEEEECCGGGTSCT---------------TCS---CGGGHHHHHHHH
T ss_pred             C---c--hhhhhhhHHHHHHHHHHHHhcC--CCeEEEEeeeeccCCC---------------ccc---cccccccchHHH
Confidence            1   1  1123567889999999999875  8899988764433211               000   111111222222


Q ss_pred             -HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 015961          186 -LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  264 (397)
Q Consensus       186 -l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~  264 (397)
                       ..++. ++.+++|+++||+.+++....                   +.. .+..++.....+++.   .++|..++.++
T Consensus       134 ~~e~~l-~~~~~~~tiirp~~~~~~~~~-------------------~~~-~~~~~~~~~~~~i~~---~DvA~~~~~~l  189 (205)
T d1hdoa_         134 RMHKVL-RESGLKYVAVMPPHIGDQPLT-------------------GAY-TVTLDGRGPSRVISK---HDLGHFMLRCL  189 (205)
T ss_dssp             HHHHHH-HHTCSEEEEECCSEEECCCCC-------------------SCC-EEESSSCSSCSEEEH---HHHHHHHHHTT
T ss_pred             HHHHHH-HhcCCceEEEecceecCCCCc-------------------ccE-EEeeCCCCCCCcCCH---HHHHHHHHHHh
Confidence             22333 668999999999999873111                   111 111112222233443   45688888888


Q ss_pred             cCCCCCCCceeccC
Q 015961          265 VDPYAKNEAFNCNN  278 (397)
Q Consensus       265 ~~~~~~g~~yni~~  278 (397)
                      .++...|+.+.++.
T Consensus       190 ~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         190 TTDEYDGHSTYPSH  203 (205)
T ss_dssp             SCSTTTTCEEEEEC
T ss_pred             CCCCCCCEEEecCC
Confidence            87777788777654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7.5e-23  Score=179.97  Aligned_cols=207  Identities=15%  Similarity=0.086  Sum_probs=138.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~  101 (397)
                      ++|+|||||||||||++|+++|++     +|  ++|++++|++.... .....++...+|+.+.+++..+++++|.|+|+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~-----~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~   87 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILE-----QGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCC   87 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHH-----HTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-----CCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccc
Confidence            457899999999999999999998     55  38999999875432 22357788889999999999999999989998


Q ss_pred             EEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh
Q 015961          102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  181 (397)
Q Consensus       102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~  181 (397)
                      ++.. ....+..++.++|+.++.+++++|.+.+  +++|+++|+...|..                        +...|.
T Consensus        88 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~--v~~fi~~Ss~~~~~~------------------------~~~~Y~  140 (232)
T d2bkaa1          88 LGTT-RGKAGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLSSKGADKS------------------------SNFLYL  140 (232)
T ss_dssp             CCCC-HHHHHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCCTT------------------------CSSHHH
T ss_pred             cccc-ccccchhhhhhhcccccceeeecccccC--ccccccCCccccccC------------------------ccchhH
Confidence            6422 1122556778999999999999998854  889998875332210                        123377


Q ss_pred             HHHHHHHHHhcCCCe-eEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 015961          182 LEDILFEEVEKKEEL-SWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  260 (397)
Q Consensus       182 ~e~~l~~~~~~~~g~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  260 (397)
                      ..|...|....+.++ +++|+||+.+||  ++...+....+.     .+..+.   +++.... ...   .+++++|+++
T Consensus       141 ~~K~~~E~~l~~~~~~~~~IlRP~~i~G--~~~~~~~~~~~~-----~~~~~~---~~~~~~~-~~~---I~~~dvA~a~  206 (232)
T d2bkaa1         141 QVKGEVEAKVEELKFDRYSVFRPGVLLC--DRQESRPGEWLV-----RKFFGS---LPDSWAS-GHS---VPVVTVVRAM  206 (232)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEEECCEEEC--TTGGGSHHHHHH-----HHHHCS---CCTTGGG-GTE---EEHHHHHHHH
T ss_pred             HHHHHhhhccccccccceEEecCceeec--CCCcCcHHHHHH-----HHHhhc---cCCcccC-CCe---EEHHHHHHHH
Confidence            766665554456676 599999999999  433222222221     111111   1221111 122   3566679999


Q ss_pred             HHHhcCCCCCCCceeccC
Q 015961          261 IWAAVDPYAKNEAFNCNN  278 (397)
Q Consensus       261 ~~~~~~~~~~g~~yni~~  278 (397)
                      ++++..+. .++.+.+.+
T Consensus       207 i~~~~~~~-~~~~~i~~~  223 (232)
T d2bkaa1         207 LNNVVRPR-DKQMELLEN  223 (232)
T ss_dssp             HHHHTSCC-CSSEEEEEH
T ss_pred             HHHHhcCc-cCCeEEEcH
Confidence            88876644 455565543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=6.4e-23  Score=181.09  Aligned_cols=227  Identities=14%  Similarity=0.078  Sum_probs=146.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  104 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~  104 (397)
                      ++|||||||||||++|+++|++     +|+  .|++++|++........+++++.+|+.+.+.+.++++++|.|+|+++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~-----~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKE-----GSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHH-----TTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHH-----CCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEee
Confidence            6899999999999999999998     675  477888876432112257899999999999999999999999999765


Q ss_pred             cccCC---------------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961          105 TWTNR---------------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus       105 ~~~~~---------------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      .....               ........+|+.++.+++..+....  ..++.+.++..       .+.          ..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~-------~~~----------~~  139 (252)
T d2q46a1          79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMG-------GTN----------PD  139 (252)
T ss_dssp             CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETT-------TTC----------TT
T ss_pred             ccccccccchhhhhhcccccccchhhhccccccceeecccccccc--ccccccccccc-------cCC----------CC
Confidence            32111               1244566889999999999887654  44444333111       111          11


Q ss_pred             CCCCCCCCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 015961          170 MPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI  249 (397)
Q Consensus       170 ~p~~~~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~  249 (397)
                      .+........|..++.+.+....+.+++++++||+++||+.... ....            .+.........   ..+++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~------------~~~~~~~~~~~---~~~i~  203 (252)
T d2q46a1         140 HPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV-RELL------------VGKDDELLQTD---TKTVP  203 (252)
T ss_dssp             CGGGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTS-SCEE------------EESTTGGGGSS---CCEEE
T ss_pred             cccccccccchhhhhhhhhhhhhcccccceeecceEEECCCcch-hhhh------------hccCcccccCC---CCeEE
Confidence            11111112224444444444446789999999999999953221 1110            01010111111   13344


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCCceeccCCC---eeehHHHHHHHHHHhC
Q 015961          250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGD---VFKWKHLWKVLAEQFG  296 (397)
Q Consensus       250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~~---~~s~~el~~~i~~~~g  296 (397)
                         ++++|++++.++.++...|++|||+++.   ..+++|+.+++++..+
T Consensus       204 ---~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         204 ---RADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             ---HHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             ---HHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence               4556888888888878889999998643   4678888777765443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.82  E-value=1.5e-20  Score=162.74  Aligned_cols=148  Identities=17%  Similarity=0.206  Sum_probs=103.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH-ccCCCeeEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL-SQLTDVTHI  101 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~-~~~~~V~h~  101 (397)
                      ++|||||||||||||++|+++|++     +|+  +|++++|++....   +.+   ..+..|..++...+ ..+|.|+|+
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~-----~~~~~~v~~~~r~~~~~~---~~~---~~~~~d~~~~~~~~~~~~d~vi~~   69 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILS-----EPTLAKVIAPARKALAEH---PRL---DNPVGPLAELLPQLDGSIDTAFCC   69 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHH-----CTTCCEEECCBSSCCCCC---TTE---ECCBSCHHHHGGGCCSCCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-----CCCeEEEEEEeCCchhhc---ccc---cccccchhhhhhccccchheeeee
Confidence            358999999999999999999998     666  7888888764432   333   44444544443333 336778887


Q ss_pred             EEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh
Q 015961          102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  181 (397)
Q Consensus       102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~  181 (397)
                      ++...........+.+.|+.++.+++++|++.  ++++++++|+...|       +                 .+...|.
T Consensus        70 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~~i~~Ss~~~~-------~-----------------~~~~~y~  123 (212)
T d2a35a1          70 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGAD-------A-----------------KSSIFYN  123 (212)
T ss_dssp             CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCC-------T-----------------TCSSHHH
T ss_pred             eeeeccccccccccccchhhhhhhcccccccc--cccccccccccccc-------c-----------------ccccchh
Confidence            65332233356778899999999999999985  48899988743222       1                 1123477


Q ss_pred             HHHHHHHHHhcCCCe-eEEEEcCCceeec
Q 015961          182 LEDILFEEVEKKEEL-SWSVHRPDTIFGF  209 (397)
Q Consensus       182 ~e~~l~~~~~~~~g~-~~~ilRp~~v~G~  209 (397)
                      ..|...|...++.++ +++|+||+.|||+
T Consensus       124 ~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~  152 (212)
T d2a35a1         124 RVKGELEQALQEQGWPQLTIARPSLLFGP  152 (212)
T ss_dssp             HHHHHHHHHHTTSCCSEEEEEECCSEEST
T ss_pred             HHHHHHhhhccccccccceeeCCcceeCC
Confidence            777766654466676 5999999999994

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.79  E-value=3.2e-19  Score=166.23  Aligned_cols=230  Identities=9%  Similarity=-0.082  Sum_probs=140.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHH-HHHHHccCCCee
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEE-TQAKLSQLTDVT   99 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~-l~~~~~~~~~V~   99 (397)
                      .+|+|||||||||||++|+++|++     +||+|++++|++.+.    ....++++++++|+.|..+ +..++.+++.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~-----~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAA-----VGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHH-----TTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHh-----CCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence            468999999999999999999998     899999999976542    1233689999999998654 667777777555


Q ss_pred             EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcc
Q 015961          100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  179 (397)
Q Consensus       100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~  179 (397)
                      ++.   ...       ...|+..+.+++++|.+++  ++++++.||...+.    .              .+..+...  
T Consensus        77 ~~~---~~~-------~~~~~~~~~~~~~aa~~ag--v~~~v~~Ss~~~~~----~--------------~~~~~~~~--  124 (350)
T d1xgka_          77 INT---TSQ-------AGDEIAIGKDLADAAKRAG--TIQHYIYSSMPDHS----L--------------YGPWPAVP--  124 (350)
T ss_dssp             ECC---CST-------TSCHHHHHHHHHHHHHHHS--CCSEEEEEECCCGG----G--------------TSSCCCCT--
T ss_pred             eec---ccc-------cchhhhhhhHHHHHHHHhC--CCceEEEeeccccc----c--------------CCcccchh--
Confidence            441   111       1346777889999998875  44444444321110    0              00011111  


Q ss_pred             hhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC-CceecCCccccceeeecccHHHHHH
Q 015961          180 YTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECYSIASDADLIAE  258 (397)
Q Consensus       180 y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~~~~~da~~la~  258 (397)
                      |..++...+.+..+.+++++++||+.+++...+.........      ....+. ....+.+++....+++.  .++++.
T Consensus       125 ~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~--~~Dva~  196 (350)
T d1xgka_         125 MWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQME------LMPDGTFEWHAPFDPDIPLPWLDA--EHDVGP  196 (350)
T ss_dssp             TTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEE------ECTTSCEEEEESSCTTSCEEEECH--HHHHHH
T ss_pred             hhhhHHHHHHHHHhhccCceeeeeceeecccccccccccccc------ccccccceeeecccCCCcceEEEe--HHHHHH
Confidence            223333332223667899999999998874222111100000      000111 12334444444444332  234455


Q ss_pred             HHHHHhcCC--CCCCCceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961          259 HQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  300 (397)
Q Consensus       259 ~~~~~~~~~--~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~  300 (397)
                      ++..+....  ...|+.|++++ +.+|++|+++.+++.+|++..
T Consensus       197 ~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~  239 (350)
T d1xgka_         197 ALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT  239 (350)
T ss_dssp             HHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred             HHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcce
Confidence            555544332  34688999986 679999999999999998753

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.44  E-value=1.1e-12  Score=114.18  Aligned_cols=156  Identities=13%  Similarity=0.081  Sum_probs=106.5

Q ss_pred             ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      +|+.++|++|||||++-||..++++|++     +|++|++.+|+....    .++..+++|++|+++++++++       
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   72 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAA-----DGHKVAVTHRGSGAP----KGLFGVEVDVTDSDAVDRAFTAVEEHQG   72 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSSCCC----TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCcchh----cCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence            4677899999999999999999999999     899999999986543    467889999999987765543       


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  165 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~  165 (397)
                      .+|.++|.|+......      ++.+..+++|+.++..+.+++...  ..+-.+++.+||...+      .+        
T Consensus        73 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~------~~--------  138 (237)
T d1uzma1          73 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL------WG--------  138 (237)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------
T ss_pred             CceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhc------cC--------
Confidence            4666777765432111      145677899999988877765443  1234577777642211      11        


Q ss_pred             CCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          166 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       166 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                             .+. ...|+.        .+.++..+ ...|+++..+.|+.|.-
T Consensus       139 -------~~~-~~~Y~asKaal~~lt~~lA~e~-~~~gIrVN~I~PG~v~T  180 (237)
T d1uzma1         139 -------IGN-QANYAASKAGVIGMARSIAREL-SKANVTANVVAPGYIDT  180 (237)
T ss_dssp             ---------C-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             -------Ccc-cHHHHHHHHHHHHHHHHHHhhh-hcCCceeeeeeeCcCCC
Confidence                   011 112553        34444433 56789999999998865

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.30  E-value=9.1e-12  Score=109.00  Aligned_cols=157  Identities=11%  Similarity=0.015  Sum_probs=105.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLS-------QL   95 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~   95 (397)
                      ..+|++|||||++-||..+++.|++     +|++|++.+|+.... .....+..++++|++|.++++++++       .+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAR-----EGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            4579999999999999999999999     899999999975431 0011245688999999987666553       46


Q ss_pred             CCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        96 ~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      |.++|.|+.....  .    ++.+..+++|+.++.++.+++.+.  ..+-.+++.+||...+.      +          
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~------~----------  141 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF------A----------  141 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS------B----------
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc------c----------
Confidence            6677776643221  1    145667899999999988887654  22345677666432111      1          


Q ss_pred             CCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          168 EDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       168 E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                           .+ ....|+.        .+.++..+ ..+|+++..+.|+.|--
T Consensus       142 -----~~-~~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~v~T  183 (248)
T d2d1ya1         142 -----EQ-ENAAYNASKGGLVNLTRSLALDL-APLRIRVNAVAPGAIAT  183 (248)
T ss_dssp             -----CT-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             -----cc-ccchhHHHHHHHHHHHHHHHHHh-hhhCcEEEEEeeCCCCC
Confidence                 01 1122543        34444444 46789999999988754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.29  E-value=2.5e-11  Score=105.74  Aligned_cols=155  Identities=17%  Similarity=0.110  Sum_probs=103.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS-------QL   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~   95 (397)
                      .+|++|||||++-||..++++|++     +|++|++.+|+....  ....-+.+.+.+|++|+++++++++       .+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAK-----EGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            458999999999999999999999     899999999975321  0112357789999999988766553       35


Q ss_pred             CCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961           96 TDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  167 (397)
Q Consensus        96 ~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~  167 (397)
                      |.++|.|+......      ++.+..+++|+.++.++.+++.+.  ..+-..++.+|+..       ..+.         
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-------~~~~---------  142 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-------YLGN---------  142 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-------GGCC---------
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-------ccCC---------
Confidence            66777765432211      145678899999999888877654  22234444444311       1110         


Q ss_pred             CCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          168 EDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       168 E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                            | ....|+.        .+.++..+ ..+|+++..+.|+.|--
T Consensus       143 ------~-~~~~Y~asKaal~~ltk~lA~el-a~~gIrVN~I~PG~v~T  183 (242)
T d1ulsa_         143 ------L-GQANYAASMAGVVGLTRTLALEL-GRWGIRVNTLAPGFIET  183 (242)
T ss_dssp             ------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ------C-CCcchHHHHHHHHHHHHHHHHHH-hhhCcEEEEEeeCcccC
Confidence                  1 1112553        34444444 46789999999998865

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=5.1e-12  Score=111.21  Aligned_cols=214  Identities=15%  Similarity=0.083  Sum_probs=129.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC---------CCCCCCCceEEEccCCCHHHHHHHHc---
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---------NWNADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~---------~~~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      +|.+|||||++-||..+++.|++     +|++|++++|+...         ......++.++.+|++|+++++++++   
T Consensus         3 GKvalITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLL-----KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV   77 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            68999999999999999999999     89999999997532         11122367789999999987766654   


Q ss_pred             ----cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHccc----C-CCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN----A-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                          .+|.++|.|+.  ....+.++.+++|+.++.++..++.+.    . .+-.+|+.+||...+.      +       
T Consensus        78 ~~~G~iDilVnnAg~--~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~------~-------  142 (254)
T d2gdza1          78 DHFGRLDILVNNAGV--NNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM------P-------  142 (254)
T ss_dssp             HHHSCCCEEEECCCC--CCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------C-------
T ss_pred             HHcCCcCeecccccc--cccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc------C-------
Confidence                35556665442  233467888999998877766655432    1 1234577776432110      0       


Q ss_pred             CCCCCCCCCCCCCcchhH--------HHH--HHHHHhcCCCeeEEEEcCCceeeccCCCcch------hHHHHHHHHHHh
Q 015961          165 PFTEDMPRLDAPNFYYTL--------EDI--LFEEVEKKEELSWSVHRPDTIFGFSPYSLMN------LVGALCVYAAVC  228 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~--------e~~--l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~------~~~~~~~~~~i~  228 (397)
                              .|. ...|+.        .+.  ++..+ ...|+++..+.|+.|--+--.....      .......   +.
T Consensus       143 --------~~~-~~~Y~asKaal~~ltrs~ala~e~-~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~---~~  209 (254)
T d2gdza1         143 --------VAQ-QPVYCASKHGIVGFTRSAALAANL-MNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDH---IK  209 (254)
T ss_dssp             --------CTT-CHHHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHH---HH
T ss_pred             --------CCC-ccchHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHH---HH
Confidence                    011 112543        221  22222 4678999999998874310000000      0000000   00


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHH
Q 015961          229 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKH  286 (397)
Q Consensus       229 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~e  286 (397)
                      .  .  +          ...-+.+..++|.++++++.++...|+++.+.+|..+.++|
T Consensus       210 ~--~--~----------p~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         210 D--M--I----------KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             H--H--H----------HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             h--c--C----------CCCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence            0  0  0          00112234556888888877666779999999988887765

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=3.5e-11  Score=105.02  Aligned_cols=157  Identities=13%  Similarity=0.069  Sum_probs=105.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ..+|++|||||++-||.++++.|++     +|++|++.+|+....   ....+++..+.+|++|.++++++++.+..|..
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~-----~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHA-----TGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceE
Confidence            3568999999999999999999999     899999999975321   00124688999999999999988877654444


Q ss_pred             EEEecccCC---------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961          101 IFYVTWTNR---------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  168 (397)
Q Consensus       101 ~a~~~~~~~---------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E  168 (397)
                      +..++....         ++.+..+++|+.++..+.+++.+.   ..+-..++.+||...+.      +           
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------~-----------  142 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------A-----------  142 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------C-----------
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc------c-----------
Confidence            444333221         145667899999988887766442   12345667666422110      0           


Q ss_pred             CCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          169 DMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       169 ~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                          .|. ...|+.        .+.++..+ ...|+++..+.|+.|.-
T Consensus       143 ----~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrvN~I~PG~v~T  184 (244)
T d1pr9a_         143 ----VTN-HSVYCSTKGALDMLTKVMALEL-GPHKIRVNAVNPTVVMT  184 (244)
T ss_dssp             ----CTT-BHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCS
T ss_pred             ----ccc-hhhhhhhHHHHHHHHHHHHHHh-CCCcEEEEEEeeCcCcC
Confidence                011 122543        34444443 45689999999998865

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.25  E-value=7.2e-11  Score=104.58  Aligned_cols=216  Identities=15%  Similarity=0.122  Sum_probs=128.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ..+|.+|||||++-||..++++|++     +|++|++++|+....      ......+.++.+|++|+++++++++    
T Consensus         4 L~gKvalITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVR-----YGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIA   78 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999     899999999975321      1123467889999999987766653    


Q ss_pred             ---cCCCeeEEEEecccC----CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                         .+|.++|.|+.....    .+    +.+..+++|+.|+..+.+++.+.  ..+-..++.+|+...+      .+.  
T Consensus        79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~------~~~--  150 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF------TAG--  150 (268)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT------CCC--
T ss_pred             HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccc------ccc--
Confidence               466677776643221    11    34567899999988888776543  1123455655532211      110  


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchh-HHHHHHHHHHhhhc
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNL-VGALCVYAAVCKHE  231 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~i~~~~  231 (397)
                                   +....+|+.        .+.++..+ ...|+++..+.|+.|-.+-....... ......   .....
T Consensus       151 -------------~~~~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~---~~~~~  213 (268)
T d2bgka1         151 -------------EGVSHVYTATKHAVLGLTTSLCTEL-GEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEE---LAHQA  213 (268)
T ss_dssp             -------------TTSCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHH---HHHHT
T ss_pred             -------------cccccccchhHHHHHhCHHHHHHHh-ChhCeEEEecCCCCccChHHhhhhcCCHHHHHH---HHHhc
Confidence                         001123553        34444433 56789999999998876321111110 111100   01111


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                      ..+   .|         -+....++|.++++++...  ..-|+++.+.+|-.
T Consensus       214 ~~~---~g---------r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t  253 (268)
T d2bgka1         214 ANL---KG---------TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT  253 (268)
T ss_dssp             CSS---CS---------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccc---CC---------CCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence            111   11         1223455688887777432  34588888877643

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.25  E-value=1.7e-11  Score=106.86  Aligned_cols=204  Identities=15%  Similarity=0.068  Sum_probs=126.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ..+|++|||||++-||.++++.|++     +|++|++.+|++....    ....++.++.+|++|+++++++++      
T Consensus         4 L~gK~alITGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVA-----EGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999     8999999999753210    011457789999999987766553      


Q ss_pred             -cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.++|.|+.....  .    ++.+..+++|+.++.++.+++...  ..+-.+++.+||...+.      +      .
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------~------~  146 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA------G------T  146 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C------C
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc------c------c
Confidence             356677776643221  1    145678899999998888766443  11235677776432111      0      0


Q ss_pred             CCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc-CCCc
Q 015961          165 PFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE-GIPL  235 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~-~~~~  235 (397)
                               + ....|+.        .+.++..+ ..+|+++..+-|+.|--+-..       .+      .+.. ..| 
T Consensus       147 ---------~-~~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~i~T~~~~-------~~------~~~~~~~p-  201 (244)
T d1nffa_         147 ---------V-ACHGYTATKFAVRGLTKSTALEL-GPSGIRVNSIHPGLVKTPMTD-------WV------PEDIFQTA-  201 (244)
T ss_dssp             ---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCSGGGT-------TS------CTTCSCCS-
T ss_pred             ---------c-cccchhhHHHHHHHHHHHHHHHh-cccCEEEEEEeeCCccChhHh-------hh------hHHHHhcc-
Confidence                     1 1112542        44444444 567899999999887652100       00      0000 111 


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCC
Q 015961          236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  280 (397)
Q Consensus       236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~  280 (397)
                                 .-.+.+..++|.++++++...  ..-|+++.+.+|.
T Consensus       202 -----------l~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         202 -----------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             -----------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -----------ccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence                       112334566688888877432  3458888887664

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.25  E-value=3.7e-11  Score=105.08  Aligned_cols=157  Identities=18%  Similarity=0.162  Sum_probs=104.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      ..+|.+|||||++-||..+++.|++     .|++|++.+|++...     .....++..+.+|++|+++++++++     
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~-----~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAV-----EGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999     899999999976421     0112467899999999987766543     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                        .+|.++|.|+......      ++.+..+++|+.++..+.+++.+.  ..+-.+++.+||....      .+      
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~------~~------  145 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW------LK------  145 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG------SC------
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc------cc------
Confidence              4666777766432211      145677899999998888877543  1123566666642211      00      


Q ss_pred             CCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                               .|. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       146 ---------~~~-~~~Y~asKaal~~ltk~lA~el-a~~gIrVN~I~PG~i~T  187 (247)
T d2ew8a1         146 ---------IEA-YTHYISTKAANIGFTRALASDL-GKDGITVNAIAPSLVRT  187 (247)
T ss_dssp             ---------CSS-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCC--
T ss_pred             ---------Ccc-cccchhhhccHHHHHHHHHHHh-cccCeEEEEEeeCCCCC
Confidence                     011 112553        44444444 56789999999998865

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.21  E-value=1.8e-11  Score=108.04  Aligned_cols=156  Identities=13%  Similarity=0.054  Sum_probs=104.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|.+|||||++-||.+++++|++     +|++|++.+|+....       .  ....++.++.+|++|+++++++++  
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   77 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAA-----QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA   77 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            578999999999999999999999     899999999974221       0  012367789999999988766654  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                           .+|.++|.|+......      ++.+..+++|+.++.++.+++...  ..+-.+++.+||...+      .+   
T Consensus        78 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~------~~---  148 (260)
T d1x1ta1          78 VRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL------VA---  148 (260)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT------SC---
T ss_pred             HHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce------ec---
Confidence                 3666777766433211      145677899999998887776543  1123567766642211      11   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                  .|. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       149 ------------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~I~PG~i~T  190 (260)
T d1x1ta1         149 ------------SAN-KSAYVAAKHGVVGFTKVTALET-AGQGITANAICPGWVRT  190 (260)
T ss_dssp             ------------CTT-CHHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCBCC
T ss_pred             ------------cCC-cchhhhhhhhHHHhHHHHHHHh-chhCcEEEEEecCCCCC
Confidence                        011 112553        34444443 56789999999998865

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.21  E-value=2.7e-11  Score=106.59  Aligned_cols=156  Identities=13%  Similarity=-0.002  Sum_probs=104.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|++|||||++-||.++++.|++     +|++|++.+|+.....    ....++..+.+|++|+++++++++       
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVR-----EGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHH-----TTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            458999999999999999999999     8999999999753210    012467889999999988766554       


Q ss_pred             cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                      .+|.++|.|+......      ++.+..+++|+.|+..+.+++...   ..+-.+++.+||...+.      +       
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------~-------  145 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR------G-------  145 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------C-------
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc------c-------
Confidence            3566777665432111      145677899999998888765432   22345777776432111      0       


Q ss_pred             CCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                              .|. ...|+.        .+.++..+ ...|+++..+.|+.+-.
T Consensus       146 --------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~V~PG~i~T  187 (256)
T d1k2wa_         146 --------EAL-VGVYCATKAAVISLTQSAGLNL-IRHGINVNAIAPGVVDG  187 (256)
T ss_dssp             --------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC
T ss_pred             --------ccc-ccchhhhhhHHHHHHHHHHHHh-cccCeEEEEEecCCCCc
Confidence                    011 122442        34444444 56789999999987765

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.21  E-value=9e-11  Score=102.80  Aligned_cols=156  Identities=15%  Similarity=0.117  Sum_probs=104.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|.+|||||++-||.+++++|++     .|++|++.+|+....      . ....++..+.+|++|++++.++++    
T Consensus         9 enKvalITGas~GIG~a~a~~la~-----~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAK-----SVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTT-----TSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999     899999999975321      0 112467889999999988776654    


Q ss_pred             ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                         .+|.++|.|+......      ++.+..+++|+.++..+.+++...  ..+-.+|+.+||...+.      +     
T Consensus        84 ~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~------~-----  152 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT------G-----  152 (251)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------C-----
T ss_pred             hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC------C-----
Confidence               3555666554322111      145677899999998888876543  12245777777533221      1     


Q ss_pred             CCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                       .         +. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       153 -~---------~~-~~~Y~asKaal~~ltr~lA~el-~~~gIrVN~V~PG~v~T  194 (251)
T d2c07a1         153 -N---------VG-QANYSSSKAGVIGFTKSLAKEL-ASRNITVNAIAPGFISS  194 (251)
T ss_dssp             -C---------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             -C---------CC-CHHHHHHHHHHHHHHHHHHHHh-hhhCeEEEEEccCCEec
Confidence             0         11 112543        34444443 56789999999998876

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.20  E-value=6.2e-11  Score=104.42  Aligned_cols=213  Identities=17%  Similarity=0.079  Sum_probs=126.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ..+|.+|||||++-||.+++++|++     .|++|++.+|+....       . ....++..+.+|++|+++++++++  
T Consensus         5 L~gK~alITGas~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~   79 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFAT-----EKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSA   79 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4678999999999999999999999     899999999975321       0 012357789999999987766554  


Q ss_pred             -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           .+|.++|.|+......      ++.+..+++|+.++.++.+++.+.   ...-..|+.+||..         +..
T Consensus        80 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~---------~~~  150 (261)
T d1geea_          80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVH---------EKI  150 (261)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGG---------GTS
T ss_pred             HHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccch---------hcc
Confidence                 4566777665432211      145677899999988887766543   22234466665321         110


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  231 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  231 (397)
                           +       .|. ...|+.        .+.++..+ ..+|+++..+.|+.|--  +-..... ..-.....+.+  
T Consensus       151 -----~-------~~~-~~~Y~asKaal~~lt~~lA~e~-~~~gIrVN~I~PG~v~T--~~~~~~~-~~~~~~~~~~~--  211 (261)
T d1geea_         151 -----P-------WPL-FVHYAASKGGMKLMTETLALEY-APKGIRVNNIGPGAINT--PINAEKF-ADPEQRADVES--  211 (261)
T ss_dssp             -----C-------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS--GGGHHHH-HSHHHHHHHHT--
T ss_pred             -----c-------Ccc-ccccccCCccchhhHHHHHHHh-hhhCcEEEEEeeCcCcC--HhHhhhc-CCHHHHHHHHh--
Confidence                 0       011 122553        34444444 56789999999998865  2110000 00000000111  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                      ..|+.            -+....++|.++++++...  ..-|+++.+.+|..
T Consensus       212 ~~pl~------------R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         212 MIPMG------------YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             TCTTS------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCC------------CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCee
Confidence            12211            1223455677777776432  24588888877654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.20  E-value=7.6e-11  Score=103.27  Aligned_cols=158  Identities=14%  Similarity=0.032  Sum_probs=103.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      ..+|++|||||++-||.++++.|++     .|++|++.+|+.+..      .....++.++.+|++|+++++++++    
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVE-----EGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321      1123578899999999987765553    


Q ss_pred             ---cCCCeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|.|+.....  .+    +.+..+++|+.++..+.+++...  ..+ -..++.+||...+.      +    
T Consensus        79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~------~----  148 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV------G----  148 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS------C----
T ss_pred             HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec------c----
Confidence               356677766543221  11    44567899999998888876543  112 23566666422110      0    


Q ss_pred             CCCCCCCCCCCCCCCCcchhH--------HHHHH-HHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL--------EDILF-EEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~--------e~~l~-~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 .|. ...|+.        .+.++ ++....+|+++..+.|+.|-.
T Consensus       149 -----------~~~-~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T  192 (251)
T d1zk4a1         149 -----------DPS-LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKT  192 (251)
T ss_dssp             -----------CTT-CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCC
T ss_pred             -----------CCC-chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCC
Confidence                       011 122553        23332 221246789999999998865

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.19  E-value=1.3e-10  Score=102.11  Aligned_cols=157  Identities=18%  Similarity=0.153  Sum_probs=101.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      ..+|+||||||++-||.+++++|++     +|++|++.+|++...      . .....+.++.+|+++.+++++.++.  
T Consensus         4 L~gK~alITGas~GIG~aia~~la~-----~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   78 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAG-----LGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVA   78 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHH
Confidence            3568999999999999999999999     899999999975321      0 0124577889999999877665432  


Q ss_pred             ------CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           95 ------LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        95 ------~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                            .|.++|.|+.....      .++....+++|+.++..+.+++...  .....+++++||.....          
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~----------  148 (258)
T d1ae1a_          79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS----------  148 (258)
T ss_dssp             HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS----------
T ss_pred             HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc----------
Confidence                  23345544432211      0145667899999998888877543  22355677666422110          


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                          +       .|. ...|+.        .+.++..+ ...|+++-.+.|+.|.-
T Consensus       149 ----~-------~~~-~~~Y~~sK~al~~lt~~lA~el-~~~gIrvN~I~PG~i~T  191 (258)
T d1ae1a_         149 ----A-------LPS-VSLYSASKGAINQMTKSLACEW-AKDNIRVNSVAPGVILT  191 (258)
T ss_dssp             ----C-------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBC-
T ss_pred             ----c-------ccc-chhHHHHHHHHHHHHHHHHHhc-CcCcEEEEEEeeCcccC
Confidence                0       011 122542        34444443 46789999999999876

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.19  E-value=6.8e-11  Score=104.00  Aligned_cols=156  Identities=17%  Similarity=0.046  Sum_probs=104.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      .+|++|||||++-||..+++.|++     +|++|++.+|+....         .....++..+.+|++|+++++++++  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   77 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAA-----EGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   77 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321         0112367789999999988766553  


Q ss_pred             -----cCCCeeEEEEecccCC-----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961           94 -----QLTDVTHIFYVTWTNR-----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~-----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                           .+|.++|.|+......     +  +.+..+++|+.++.++.+++...  ..+-.+++.+||...+.      +  
T Consensus        78 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------~--  149 (258)
T d1iy8a_          78 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR------G--  149 (258)
T ss_dssp             HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------B--
T ss_pred             HHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc------C--
Confidence                 4666777765432111     1  45667899999999988877543  12244677666432111      1  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                   .|. ...|+.        .+.++..+ ...|+++..+.|+.|.-
T Consensus       150 -------------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~i~PG~v~T  191 (258)
T d1iy8a_         150 -------------IGN-QSGYAAAKHGVVGLTRNSAVEY-GRYGIRINAIAPGAIWT  191 (258)
T ss_dssp             -------------CSS-BHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             -------------CCC-chHHHHHHHHHHHHHHHHHHHh-CccCceEEEEeeCcccC
Confidence                         011 122543        34444444 56789999999998865

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.18  E-value=7.8e-11  Score=103.53  Aligned_cols=154  Identities=14%  Similarity=0.052  Sum_probs=100.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      |.+|||||++-||..++++|++     +|++|++.+|++...      . ....++..+.+|++|+++++++++      
T Consensus         2 KValITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVK-----DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   76 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CEEEEcCCccHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            4569999999999999999999     899999999975321      0 012467789999999987766543      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                       .+|.++|.|+......      ++.+..+++|+.|+.++.+++...   ..+-.+++.+||...+.      +      
T Consensus        77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------~------  144 (255)
T d1gega_          77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV------G------  144 (255)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------C------
T ss_pred             CCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc------c------
Confidence             3566777665422111      145667899999998888876442   22345666665422110      0      


Q ss_pred             CCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                               .|. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       145 ---------~~~-~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~i~T  186 (255)
T d1gega_         145 ---------NPE-LAVYSSSKFAVRGLTQTAARDL-APLGITVNGYCPGIVKT  186 (255)
T ss_dssp             ---------CTT-BHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBSS
T ss_pred             ---------Ccc-cccchhCHHHHHhhHHHHHHHh-hhhCcEEEEEecCcccC
Confidence                     011 122553        34444443 56789999999988754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.3e-10  Score=104.30  Aligned_cols=107  Identities=14%  Similarity=0.047  Sum_probs=79.0

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CC--CCCCceEEEccCCCHHHHH
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WN--ADHLVEYVQCDVSDPEETQ   89 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~--~~~~v~~~~~Dl~d~~~l~   89 (397)
                      ....+|++|||||++-||.++++.|++     .|++|++.+|+....          ..  ...++..+.+|++|+++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~-----~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~   82 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLE-----LGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN   82 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHH
Confidence            346789999999999999999999999     899999999974210          11  1246788999999998776


Q ss_pred             HHHc-------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc
Q 015961           90 AKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        90 ~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                      ++++       .+|.++|.|+......      ++.+..+++|+.++..+.+++...
T Consensus        83 ~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~  139 (297)
T d1yxma1          83 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS  139 (297)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHh
Confidence            6553       4666777665322111      145667899999998888877543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=7.8e-11  Score=102.58  Aligned_cols=156  Identities=13%  Similarity=0.062  Sum_probs=103.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHccCC---Ce
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLT---DV   98 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~V   98 (397)
                      .+|++|||||++-||..++++|++     +|++|++.+|+....   ..+.+++..+.+|++|.++++++++.+.   .+
T Consensus         4 ~GK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHA-----SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence            579999999999999999999999     899999999975321   0012578899999999999999887654   45


Q ss_pred             eEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  169 (397)
Q Consensus        99 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~  169 (397)
                      +|.|+......      ++.+..+++|+.++..+.+++.+.   ...-..++.++|...+.      +            
T Consensus        79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------~------------  140 (242)
T d1cyda_          79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV------T------------  140 (242)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------C------------
T ss_pred             EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc------c------------
Confidence            55544322110      145667899999998888765432   11234566665421110      0            


Q ss_pred             CCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          170 MPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       170 ~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                         .|. ...|+.        .+.++..+ ...|+++..+-|+.|-.
T Consensus       141 ---~~~-~~~Y~asKaal~~lt~~lA~e~-~~~gIrvN~I~PG~i~T  182 (242)
T d1cyda_         141 ---FPN-LITYSSTKGAMTMLTKAMAMEL-GPHKIRVNSVNPTVVLT  182 (242)
T ss_dssp             ---CTT-BHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBTT
T ss_pred             ---CCc-cccccchHHHHHHHHHHHHHHh-CccCeecccCCCCCccC
Confidence               011 122553        34444443 56789999999988764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=5.6e-11  Score=104.38  Aligned_cols=157  Identities=11%  Similarity=0.016  Sum_probs=103.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      ..+|++|||||++-||.+++++|++     .|++|++.+|+....      . ....++..+++|++|+++++++++   
T Consensus         9 L~gK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFAT-----AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHT-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999     899999999975321      0 012467889999999987665543   


Q ss_pred             ----cCCCeeEEEEecccCC-----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                          .+|.++|.|+......     ++.+..+++|+.++.++.+++...  ..+-..++.+||...+.      +     
T Consensus        84 ~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~------~-----  152 (255)
T d1fmca_          84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------K-----  152 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC------C-----
T ss_pred             HHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc------c-----
Confidence                4666777766432211     145667899999998888766543  11123455555322110      0     


Q ss_pred             CCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                .+. ...|+.        .+.++..+ ..+|+++..+-|+.|--
T Consensus       153 ----------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~I~PG~i~T  194 (255)
T d1fmca_         153 ----------NIN-MTSYASSKAAASHLVRNMAFDL-GEKNIRVNGIAPGAILT  194 (255)
T ss_dssp             ----------CTT-CHHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECSBCS
T ss_pred             ----------ccc-cccchhHHHHHHHHHHHHHHHh-CccCeEEEEeeeCcCcC
Confidence                      011 122553        34444444 56789999999998865

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.15  E-value=4.2e-11  Score=104.99  Aligned_cols=157  Identities=13%  Similarity=0.071  Sum_probs=105.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ..+|++|||||++-||.+++++|++     +|++|++.+|+....    .....++.++++|++|+++++++++      
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVA-----AGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999     899999999975321    0012457899999999987766553      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.++|.|+......      ++.+..+++|+.++.++.+++.+.  ..+-.+++.+||...+.      +       
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~------~-------  144 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM------G-------  144 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C-------
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc------c-------
Confidence             4666777765432211      145667899999998888877543  12245777776432111      0       


Q ss_pred             CCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                              .+. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       145 --------~~~-~~~Y~asKaal~~lt~~lA~e~-a~~gIrVN~I~PG~v~T  186 (254)
T d1hdca_         145 --------LAL-TSSYGASKWGVRGLSKLAAVEL-GTDRIRVNSVHPGMTYT  186 (254)
T ss_dssp             --------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             --------ccc-hhhHHHHHHHHHHHHHHHHHHh-CCCceEEEEeeeCcccC
Confidence                    011 112553        34444444 56789999999988764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.15  E-value=4.6e-10  Score=98.80  Aligned_cols=164  Identities=13%  Similarity=0.062  Sum_probs=101.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      .++|++|||||++-||.++++.|++     .|++|++.+|+.....        ....++..+.+|++|+++++++++. 
T Consensus         7 l~gK~alITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           7 FVNKTIIVTGGNRGIGLAFTRAVAA-----AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHH-----TTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            3568999999999999999999999     8999999999865320        0124678899999999987766643 


Q ss_pred             ------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCC
Q 015961           95 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKI  159 (397)
Q Consensus        95 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~  159 (397)
                            +|.++|.|+......      ++.+..+++|+.|+.++.+++.+.   ...-..++..++...+.++...+.  
T Consensus        82 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~--  159 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN--  159 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT--
T ss_pred             HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc--
Confidence                  333444443221110      145667899999988887765442   122334444443222211100000  


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          160 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       160 ~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                  ..+. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       160 ------------~~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrvN~I~PG~i~T  202 (260)
T d1h5qa_         160 ------------GSLT-QVFYNSSKAACSNLVKGLAAEW-ASAGIRVNALSPGYVNT  202 (260)
T ss_dssp             ------------EECS-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ------------cCcc-ccchhhhhhhHHHHHHHHHHHh-chhCeEEeecCCCcccC
Confidence                        0011 122543        34444443 56789999999998865

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.14  E-value=9e-11  Score=102.75  Aligned_cols=157  Identities=17%  Similarity=0.052  Sum_probs=103.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc---
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~---   93 (397)
                      .+|++|||||++-||..+++.|++     +|++|++.+|+....      .  ....++..+.+|++|+++++++++   
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   78 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAE-----AGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   78 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0  012357789999999987766553   


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|.|+......      ++.+..+++|+.++..+.+++...  ..+-.+++.++|....      .+    
T Consensus        79 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~------~~----  148 (251)
T d1vl8a_          79 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE------EV----  148 (251)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT------CC----
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhc------cc----
Confidence                4666777766422111      145667899999998888876554  1223466666532110      00    


Q ss_pred             CCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                         +       .+ ....|+.        .+.++..+ ..+|+++..+.|+.|--
T Consensus       149 ---~-------~~-~~~~Y~asKaal~~lt~~lA~e~-~~~gIrVN~I~PG~i~T  191 (251)
T d1vl8a_         149 ---T-------MP-NISAYAASKGGVASLTKALAKEW-GRYGIRVNVIAPGWYRT  191 (251)
T ss_dssp             ---C-------SS-SCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBCS
T ss_pred             ---c-------Cc-cccchHHHHHhHHHHHHHHHHHh-cccCeEEEEEeeCcccC
Confidence               0       01 1122553        34444444 56789999999998865

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.13  E-value=7.8e-11  Score=103.81  Aligned_cols=156  Identities=15%  Similarity=0.060  Sum_probs=104.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|++|||||++-||.++++.|++     .|++|++.+|+....       .....++..+.+|++|+++++++++    
T Consensus         4 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAE-----EGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999     899999999975321       0112467889999999987766553    


Q ss_pred             ---cCCCeeEEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|.|+......   +    +.+..+++|+.++..+.+++.+.  ..+--+++.+||...+.      +    
T Consensus        79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~------~----  148 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK------G----  148 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS------C----
T ss_pred             HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc------C----
Confidence               3666777765432211   1    45667899999998888877543  12245677776532221      1    


Q ss_pred             CCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                        .         |. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       149 --~---------~~-~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~v~T  190 (260)
T d1zema1         149 --P---------PN-MAAYGTSKGAIIALTETAALDL-APYNIRVNAISPGYMGP  190 (260)
T ss_dssp             --C---------TT-BHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             --C---------cc-hHHHHHHHHHHHHHHHHHHHHh-hhhCCEEEEeccCcccC
Confidence              0         11 112543        34444444 46789999999998865

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.12  E-value=2.3e-10  Score=100.59  Aligned_cols=156  Identities=14%  Similarity=0.086  Sum_probs=99.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      .+|++|||||++-||..+++.|++     .|++|++++|+....      . ....++..+.+|++|+++++++++    
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAG-----FGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999     899999999975321      0 012468899999999987655443    


Q ss_pred             ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                          .+|.++|.|+......      ++.+..+++|+.++..+.+++...  ..+-.+++.+||....      .+    
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~------~~----  151 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV------VS----  151 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc------cc----
Confidence                2455666655422111      145678899999998888876543  1123466666642211      00    


Q ss_pred             CCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                        .         +. ...|+.        .+.++..+ ...|+++..+-|+.|--
T Consensus       152 --~---------~~-~~~Y~asKaal~~lt~~lA~e~-~~~gIrVN~V~PG~i~T  193 (259)
T d1xq1a_         152 --A---------SV-GSIYSATKGALNQLARNLACEW-ASDGIRANAVAPAVIAT  193 (259)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEECCSCC-
T ss_pred             --c---------cc-cccccccccchhhhhHHHHHHh-cccCeEEEEeccCcccC
Confidence              0         11 112553        34444444 56789999999998865

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=6.7e-11  Score=103.47  Aligned_cols=156  Identities=12%  Similarity=0.065  Sum_probs=103.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------Q   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~-------~   94 (397)
                      .+|++|||||++-||.++++.|++     +|++|++.+|+....   ....+++.++.+|++|+++++++++       .
T Consensus         5 ~GK~alITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVN-----SGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999     899999999975321   0012467899999999987766554       3


Q ss_pred             CCCeeEEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           95 LTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                      +|.++|.|+......   +    +.+..+++|+.++.++.+++.+. ..+-.+++.+||...+.      +      .  
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~------~------~--  145 (250)
T d1ydea1          80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI------G------Q--  145 (250)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH------C------C--
T ss_pred             CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc------c------c--
Confidence            666777766322111   1    35677899999998888877654 11113566666432211      1      0  


Q ss_pred             CCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          167 TEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                             |. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       146 -------~~-~~~Y~asKaal~~lt~~lA~e~-a~~gIrVN~I~PG~i~T  186 (250)
T d1ydea1         146 -------AQ-AVPYVATKGAVTAMTKALALDE-SPYGVRVNCISPGNIWT  186 (250)
T ss_dssp             -------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCC
T ss_pred             -------cC-cchhHHHHhhHHHHHHHHHHHh-cccCeEEEEEeeCCCCC
Confidence                   11 112543        34444444 56789999999998854

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.12  E-value=6e-10  Score=97.45  Aligned_cols=101  Identities=15%  Similarity=0.104  Sum_probs=73.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHcc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ-----   94 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~~-----   94 (397)
                      +|+||||||++-||.+++++|++     +|+  .|++..|+....    .....++.++.+|++|.++++++++.     
T Consensus         3 ~KtilITGassGIG~a~a~~la~-----~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVK-----DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHT-----CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            38999999999999999999998     674  688888876432    11235789999999999877655422     


Q ss_pred             ----CCCeeEEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHc
Q 015961           95 ----LTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        95 ----~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~  131 (397)
                          +|.++|.|+......   +    ..+..+++|+.|+.++.+++.
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  125 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL  125 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHH
Confidence                566777766432211   1    345678999999988877664

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.11  E-value=2.5e-10  Score=98.88  Aligned_cols=154  Identities=13%  Similarity=0.045  Sum_probs=100.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCH-HHHHHHHccCCCeeEEEE
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-EETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~~V~h~a~  103 (397)
                      .+|++|||||++-||.++++.|++     +|++|++.+|+.+..  ...+.+++.+|+++. +.+.+.+..+|.++|.|+
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~-----~Ga~V~~~~r~~~~l--~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG   75 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQ-----EGAEVTICARNEELL--KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAG   75 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHH--HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHH--HhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccc
Confidence            468999999999999999999999     899999999975321  113457889999864 455566666777777765


Q ss_pred             ecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961          104 VTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  175 (397)
Q Consensus       104 ~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~  175 (397)
                      ......      ++.+..+++|+.++..+.+++...  ..+-.+++.++|....       ..              .+ 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~-------~~--------------~~-  133 (234)
T d1o5ia_          76 GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI-------SP--------------IE-  133 (234)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------SC--------------CT-
T ss_pred             ccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc-------cc--------------cc-
Confidence            322111      145667889999988887766443  1123456655532111       00              01 


Q ss_pred             CCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          176 PNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       176 ~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      ....|..        .+.++..+ ...|+++-.+.|+.+--
T Consensus       134 ~~~~Y~asKaal~~ltk~lA~el-a~~gIrVN~I~PG~v~T  173 (234)
T d1o5ia_         134 NLYTSNSARMALTGFLKTLSFEV-APYGITVNCVAPGWTET  173 (234)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ccccchhHHHHHHHHHHHHHHHh-cccCeEEeecccCccch
Confidence            1222432        34444444 56789999999998765

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.10  E-value=3.5e-11  Score=104.88  Aligned_cols=157  Identities=18%  Similarity=0.142  Sum_probs=104.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ..+|++|||||++-||+++++.|++     +|++|++.+|+.....    ....+...+.+|++|+++++++++      
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~-----~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAA-----RGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            3578999999999999999999999     8999999999753210    001356789999999987766554      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.++|.|+......      ++.+..+++|+.++..+.+++.+.  ..+-.+++.+||...+.      +      .
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~------~------~  144 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM------G------N  144 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------C------C
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC------C------C
Confidence             3566667665422211      145667899999998888877543  11235677776533221      1      0


Q ss_pred             CCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                               +. ...|+.        .+.++..+ ..+|+++..+.|+.|--
T Consensus       145 ---------~~-~~~Y~asKaal~~lt~~lA~el-a~~gIrVN~I~PG~i~T  185 (243)
T d1q7ba_         145 ---------GG-QANYAAAKAGLIGFSKSLAREV-ASRGITVNVVAPGFIET  185 (243)
T ss_dssp             ---------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ---------CC-CHHHHHHHHHHHHHHHHHHHHh-CccCeEEEEEecceEec
Confidence                     11 112543        34444443 56789999999988754

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.10  E-value=1.1e-10  Score=102.84  Aligned_cols=157  Identities=20%  Similarity=0.148  Sum_probs=102.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--   94 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--   94 (397)
                      ..+|++|||||++-||.++++.|++     +|++|++.+|+....      . ....++.++.+|++|+++++++++.  
T Consensus         6 L~GK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELAS-----LGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999     899999999975321      0 0124567899999999877655432  


Q ss_pred             ------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           95 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        95 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                            +|.++|.|+......      ++.+..+++|+.++.++.+++...  ..+-.+++.+||.....      +   
T Consensus        81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------~---  151 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL------A---  151 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS------C---
T ss_pred             HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc------c---
Confidence                  455666655322111      145667899999998888876543  12245677776422110      0   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                  .|. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       152 ------------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~I~PG~i~T  193 (259)
T d2ae2a_         152 ------------VPY-EAVYGATKGAMDQLTRCLAFEW-AKDNIRVNGVGPGVIAT  193 (259)
T ss_dssp             ------------CTT-CHHHHHHHHHHHHHHHHHHHHT-GGGTEEEEEEEECSBCS
T ss_pred             ------------ccc-ccchHHHHHHHHHHHHHHHHHh-CcCceEEEEeeeCcccC
Confidence                        011 122542        34444333 45689999999998864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.08  E-value=7.6e-10  Score=96.66  Aligned_cols=103  Identities=12%  Similarity=0.100  Sum_probs=73.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      |+||||||++-||..++++|++...  +|++|++..|+.....      ....++.++.+|++|+++++++++       
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQ--PPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSS--CCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            6899999999999999999863110  6999999999865431      123578899999999977655443       


Q ss_pred             --cCCCeeEEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHc
Q 015961           94 --QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~  131 (397)
                        .+|.++|.|+......   +    ..+..+++|+.|+..+.+++.
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~  127 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL  127 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHH
Confidence              2555666655422211   1    245678999999888877654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.07  E-value=3.5e-10  Score=100.29  Aligned_cols=159  Identities=15%  Similarity=0.022  Sum_probs=102.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      ...+|++|||||++-||..+++.|++     +|++|++.+|+....        ......+.++.+|++|++++.+.++ 
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~-----~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGR-----RGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHH
Confidence            34579999999999999999999999     899999998875321        0112467889999999987766554 


Q ss_pred             ------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                            .+|.++|.++......      +.....+++|+.++..+++++...-.+-.+++.+++..      ...+.   
T Consensus        90 ~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~------~~~~~---  160 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT------GQAKA---  160 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG------GTCSS---
T ss_pred             HHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc------ccccc---
Confidence                  3555666554322211      14466789999999999888876522223444444211      01110   


Q ss_pred             CCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 .+ ....|+.        .+.++..+ ...|+++..+.|+.|-.
T Consensus       161 -----------~~-~~~~Y~asKaal~~ltk~lA~e~-~~~gIrVN~I~PG~v~T  202 (272)
T d1g0oa_         161 -----------VP-KHAVYSGSKGAIETFARCMAIDM-ADKKITVNVVAPGGIKT  202 (272)
T ss_dssp             -----------CS-SCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBSS
T ss_pred             -----------cc-chhhHHHHHHHHHHHHHHHHHHh-chhCeEEEEEccCCcCC
Confidence                       01 1222542        34444433 45789999999998864

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=5.6e-10  Score=97.97  Aligned_cols=117  Identities=18%  Similarity=0.135  Sum_probs=82.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHH--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL--   92 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~--   92 (397)
                      ..+|.+|||||++-||.++++.|++     +|++|++.+|+....         .....++.++++|++|++++++++  
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~-----~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQ-----QGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321         111236778999999998766544  


Q ss_pred             -----ccCCCeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHcc----cCCCcceEEEecC
Q 015961           93 -----SQLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIP----NAPNLRHVCLQTG  145 (397)
Q Consensus        93 -----~~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~----~~~~~~~~~~~s~  145 (397)
                           .++|.++|.|+.....  .+    ..+..+++|+.+...+.+++.+    ....-.+++.+||
T Consensus        83 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS  150 (257)
T d1xg5a_          83 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  150 (257)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEec
Confidence                 3467777776643211  11    4566788999998777666533    2323457777764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.06  E-value=1.7e-10  Score=101.52  Aligned_cols=155  Identities=17%  Similarity=0.098  Sum_probs=102.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      +|.+|||||++-||..++++|++     +|++|++.+|+....      . ....++..+++|++|+++++++++     
T Consensus         2 gKValITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGK-----EGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   76 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999     899999999975321      0 012467889999999987766554     


Q ss_pred             --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                        .+|.++|.|+......      ++.+..+++|+.++.++.+++.+.    ..+-.+++.++|...+      .+    
T Consensus        77 ~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~------~~----  146 (257)
T d2rhca1          77 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK------QG----  146 (257)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT------SC----
T ss_pred             hCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc------cc----
Confidence              3566777765432211      145678899999999999987642    1223466666532211      11    


Q ss_pred             CCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                 .|. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       147 -----------~~~-~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~i~T  188 (257)
T d2rhca1         147 -----------VVH-AAPYSASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVET  188 (257)
T ss_dssp             -----------CTT-CHHHHHHHHHHHHHHHHHHHHT-TTSEEEEEEEEECSBCS
T ss_pred             -----------ccc-chhHHHHHHHHHHHHHHHHHHh-hhhCcEEEEEeeCCCCC
Confidence                       011 122553        34444433 46689999999998754

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.05  E-value=5.8e-10  Score=97.68  Aligned_cols=155  Identities=12%  Similarity=0.038  Sum_probs=102.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCC-CHHHHHHHH--
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVS-DPEETQAKL--   92 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~-d~~~l~~~~--   92 (397)
                      ..+|+||||||++-||..++++|++     +|++|+++.|+....        .....++.++.+|++ +.+++++++  
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~-----~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   77 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVK-----RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK   77 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHH-----TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHH
Confidence            3468999999999999999999999     899999998875432        112346788999998 544444433  


Q ss_pred             -----ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHccc-----CCCcceEEEecCCccccccccccCCCCCC
Q 015961           93 -----SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN-----APNLRHVCLQTGTKHYLGPFEAFGKIKPY  162 (397)
Q Consensus        93 -----~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  162 (397)
                           ..+|.+++.|+.  ...+..+..+++|+.|+.++..++...     .....+++.+||...+.      +     
T Consensus        78 ~~~~~g~iDilvnnAG~--~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~------~-----  144 (254)
T d1sbya1          78 IFDQLKTVDILINGAGI--LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN------A-----  144 (254)
T ss_dssp             HHHHHSCCCEEEECCCC--CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------C-----
T ss_pred             HHHHcCCCCEEEeCCCC--CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc------C-----
Confidence                 335555555432  234467888999999988887766543     12345677776432221      0     


Q ss_pred             CCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          163 DPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       163 ~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                .+. ...|+.        .+.++..+ ...|+++..+.|+.|.-
T Consensus       145 ----------~~~-~~~Y~asKaal~~~t~~la~el-~~~gIrVn~I~PG~v~T  186 (254)
T d1sbya1         145 ----------IHQ-VPVYSASKAAVVSFTNSLAKLA-PITGVTAYSINPGITRT  186 (254)
T ss_dssp             ----------CTT-SHHHHHHHHHHHHHHHHHHHHH-HHHSEEEEEEEECSEES
T ss_pred             ----------CCC-CHHHHHHHHHHHHHHHHHHhhc-cccCeEEEEEEeCCCcC
Confidence                      011 112543        44444444 46689999999999875

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.05  E-value=7.6e-10  Score=97.34  Aligned_cols=152  Identities=20%  Similarity=0.149  Sum_probs=98.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC---------C-CCCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      ++||||||+|-||..++++|.+     +|+ .|+++.|+....         . ....++.++.+|++|.+++.+++..+
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~-----~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLAR-----RGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHH-----HTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            6899999999999999999998     788 488888863221         0 01245789999999999998887764


Q ss_pred             C------CeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961           96 T------DVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  163 (397)
Q Consensus        96 ~------~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  163 (397)
                      .      .|+|.++......  +    .....+++|+.++.++.++++..  ...+++.+||...      .+|.     
T Consensus        85 ~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~--~~~~iv~~SS~a~------~~g~-----  151 (259)
T d2fr1a1          85 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFAS------AFGA-----  151 (259)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHH------HTCC-----
T ss_pred             cccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc--CCceEeeecchhh------ccCC-----
Confidence            3      2555544322111  0    23445689999999999888764  3456666664322      2221     


Q ss_pred             CCCCCCCCCCCCCCcchhHHHH----HHHHHhcCCCeeEEEEcCCceee
Q 015961          164 PPFTEDMPRLDAPNFYYTLEDI----LFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       164 ~~~~E~~p~~~~~~~~y~~e~~----l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                +. ...|+..|.    +.+.. +..|++++.+.|+.+.+
T Consensus       152 ----------~~-~~~YaAaka~l~~la~~~-~~~Gi~v~~I~pg~~~~  188 (259)
T d2fr1a1         152 ----------PG-LGGYAPGNAYLDGLAQQR-RSDGLPATAVAWGTWAG  188 (259)
T ss_dssp             ----------TT-CTTTHHHHHHHHHHHHHH-HHTTCCCEEEEECCBC-
T ss_pred             ----------cc-cHHHHHHHHhHHHHHHHH-HhCCCCEEECCCCcccC
Confidence                      00 111554222    22222 46789999999998877

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.04  E-value=6.9e-10  Score=96.42  Aligned_cols=156  Identities=17%  Similarity=0.111  Sum_probs=101.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ..+|++|||||++-||..+++.|++     +|++|++..|+....    .....++.++++|+++++++++.++      
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAR-----EGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3579999999999999999999999     899999999976421    0012467789999999988766554      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  166 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~  166 (397)
                       .+|.++|.|+......      +..+..+++|+.++.++.+++...-.+-..++.+|+....       .         
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-------~---------  141 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-------G---------  141 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-------C---------
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-------c---------
Confidence             3555666543322111      1446778999999999988876653223334433321100       0         


Q ss_pred             CCCCCCCCCCCcchh-----H---HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          167 TEDMPRLDAPNFYYT-----L---EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       167 ~E~~p~~~~~~~~y~-----~---e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                            .| ....|+     .   .+.++..+ ...|+++..+.|+.|-.
T Consensus       142 ------~~-~~~~Y~~sK~al~~lt~~lA~el-~~~gIrvN~I~PG~v~T  183 (241)
T d2a4ka1         142 ------AF-GLAHYAAGKLGVVGLARTLALEL-ARKGVRVNVLLPGLIQT  183 (241)
T ss_dssp             ------HH-HHHHHHHCSSHHHHHHHHHHHHH-TTTTCEEEEEEECSBCC
T ss_pred             ------cc-CccccchhhHHHHHHHHHHHHHH-hHhCCEEeeeccCcCCC
Confidence                  00 011133     2   44454444 56789999999998854

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.8e-10  Score=100.28  Aligned_cols=118  Identities=14%  Similarity=0.052  Sum_probs=84.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--   93 (397)
                      ...+|.||||||++-||.+++++|++     +|++|++++|+....      . ....++..+.+|++|.++++++++  
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~-----~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i   78 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAK-----LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV   78 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            45689999999999999999999999     899999999975321      0 112468899999999988766554  


Q ss_pred             -----cCCCeeEEEEecccCCC------cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961           94 -----QLTDVTHIFYVTWTNRS------TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  145 (397)
Q Consensus        94 -----~~~~V~h~a~~~~~~~~------~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  145 (397)
                           .+|.++|.|+.......      ..+..+++|+.|+.++.+++...  ..+-.+++.+||
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS  143 (244)
T d1yb1a_          79 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVAS  143 (244)
T ss_dssp             HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             HHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeec
Confidence                 24556666554322111      34567899999998888866543  123456777764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.03  E-value=2.6e-10  Score=101.14  Aligned_cols=106  Identities=14%  Similarity=0.134  Sum_probs=77.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ...+|++|||||++-||..+++.|++     .|++|++.+|+....          .....++..+.+|++|++++++++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~-----~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~   76 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQ-----EGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQII   76 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHH
Confidence            35679999999999999999999999     899999999975321          011235788999999998776655


Q ss_pred             c-------cCCCeeEEEEecccCC------C----cHHHHHHhHHHHHHHHHHHHccc
Q 015961           93 S-------QLTDVTHIFYVTWTNR------S----TEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        93 ~-------~~~~V~h~a~~~~~~~------~----~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                      +       .+|.++|.|+......      +    ..+..+++|+.++.++.+++...
T Consensus        77 ~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~  134 (272)
T d1xkqa_          77 NSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH  134 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccc
Confidence            4       4666777765432110      1    24556789999998888876553

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.02  E-value=3.7e-10  Score=100.14  Aligned_cols=156  Identities=12%  Similarity=0.057  Sum_probs=101.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      .+|++|||||++-||..+++.|++     .|++|++.+|+....          .....++..+.+|++|+++++++++ 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   77 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAK-----EGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   77 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHH
Confidence            478999999999999999999999     899999999975321          0112357889999999987766554 


Q ss_pred             ------cCCCeeEEEEecccCC------C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961           94 ------QLTDVTHIFYVTWTNR------S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~~------~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                            .+|.++|.|+......      +  ..+..+++|+.++..+.+++...  ..+-..++.+|+.         .+
T Consensus        78 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~---------~~  148 (274)
T d1xhla_          78 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIV---------AG  148 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG---------GS
T ss_pred             HHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhh---------hc
Confidence                  3566777665322111      1  34567899999998888877654  1223445544421         11


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      ..   .         .+ ....|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       149 ~~---~---------~~-~~~~Y~asKaal~~ltk~lA~el-a~~gIrVN~I~PG~i~T  193 (274)
T d1xhla_         149 PQ---A---------HS-GYPYYACAKAALDQYTRCTAIDL-IQHGVRVNSVSPGAVAT  193 (274)
T ss_dssp             SS---C---------CT-TSHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBCS
T ss_pred             cc---c---------CC-CCceehhhhhHHHHHHHHHHHHH-hHhCCceeeeccCCCcC
Confidence            10   0         01 1122552        44444444 56789999999998864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.01  E-value=1.9e-09  Score=96.56  Aligned_cols=212  Identities=16%  Similarity=0.116  Sum_probs=118.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|++|||||+|-||.+++++|++     .|++|++++|+....      .  .....+..+.+|+++.+++++.+.    
T Consensus        25 gK~alITGas~GIG~aiA~~la~-----~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSS-----LGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            48999999999999999999999     899999999985321      0  012457789999999988765543    


Q ss_pred             ---cCCCeeEEEEecccCCC------cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCC
Q 015961           94 ---QLTDVTHIFYVTWTNRS------TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~~------~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                         .+|.++|.|+.......      +....+.+|..+...+...+...   ...-..++.+++.         .+..  
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~---------~~~~--  168 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI---------YAET--  168 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT---------HHHH--
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccc---------hhhh--
Confidence               35656666553222111      34555677888877665544321   2223334433321         1100  


Q ss_pred             CCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                       .         .+ ....|+.        .+.++..+ ...|+++-.+.|+.|--+.............  ....+  ..
T Consensus       169 -~---------~~-~~~~YsasKaal~~ltk~lA~el-a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~--~~  232 (294)
T d1w6ua_         169 -G---------SG-FVVPSASAKAGVEAMSKSLAAEW-GKYGMRFNVIQPGPIKTKGAFSRLDPTGTFE--KEMIG--RI  232 (294)
T ss_dssp             -C---------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC------CCTTSHHH--HHHHT--TC
T ss_pred             -c---------cc-ccchHHHHHHHHHHHHHHHHHHH-hHhCeEEEEEccCccccchhhhccCCcHHHH--HHHhh--cC
Confidence             0         01 1122553        34444443 5678999999999986532111111000010  00011  11


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCe
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  281 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~  281 (397)
                      |+.            -+....++|..+++++...  ...|+++.+.+|..
T Consensus       233 pl~------------R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         233 PCG------------RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             TTS------------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCC------------CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChh
Confidence            211            1223455688888777442  25688888877653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.00  E-value=3e-10  Score=98.89  Aligned_cols=153  Identities=16%  Similarity=0.052  Sum_probs=100.2

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      -||||||++-||..++++|++     .|++|++.+++....       . ....++.++.+|++|+++++++++      
T Consensus         3 V~lITGas~GIG~a~a~~la~-----~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGK-----AGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             EEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999     899998876543211       0 012357789999999988766554      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  164 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  164 (397)
                       .+|.++|.|+......      ++.+..+++|+.++.++.+++.+.  ..+--+++.+||...+.      +       
T Consensus        78 g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~------~-------  144 (244)
T d1edoa_          78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI------G-------  144 (244)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------C-------
T ss_pred             CCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC------C-------
Confidence             3566666655322111      145678899999998888877553  11245777777533221      1       


Q ss_pred             CCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          165 PFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       165 ~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                              .+. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       145 --------~~~-~~~Y~asKaal~~ltk~lA~el-~~~gIrvN~I~PG~i~T  186 (244)
T d1edoa_         145 --------NIG-QANYAAAKAGVIGFSKTAAREG-ASRNINVNVVCPGFIAS  186 (244)
T ss_dssp             --------CTT-CHHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECSBCS
T ss_pred             --------CCC-CHHHHHHHHHHHHChHHHHHHH-hhhCcEEEEEecceecc
Confidence                    011 112542        44444444 56789999999988754

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.00  E-value=2.6e-10  Score=100.33  Aligned_cols=107  Identities=17%  Similarity=-0.017  Sum_probs=77.2

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +|..+|+||||||++-||.+++++|++     +|++|++..|+....       . ....++..+.+|++|++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~-----~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~   76 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGR-----RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD   76 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHH
Confidence            356789999999999999999999999     899999877654321       0 012467889999999987766554


Q ss_pred             -------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc
Q 015961           94 -------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                             .+|.++|.|+......      +..+..+++|+.+..++++++...
T Consensus        77 ~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  129 (259)
T d1ja9a_          77 KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH  129 (259)
T ss_dssp             HHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence                   3455666655432211      134667899999988888877654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.5e-09  Score=94.51  Aligned_cols=158  Identities=9%  Similarity=0.056  Sum_probs=103.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--CCCCCCCceEEEccCCCHHHHHHHHc---cCCCe
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVSDPEETQAKLS---QLTDV   98 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~d~~~l~~~~~---~~~~V   98 (397)
                      ..+|++|||||++-||+.+++.|++     +|++|++.+|++..  ......+++...+|+.+.+.++....   .+|.+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~-----~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~l   78 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAR-----EGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeE
Confidence            3468999999999999999999999     89999999997532  11223578889999988876655544   45667


Q ss_pred             eEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961           99 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus        99 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      +|.++......      +..+..+++|+.++..+.+++...  ..+--.++.+||.         .+..          .
T Consensus        79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~---------~~~~----------~  139 (245)
T d2ag5a1          79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV---------ASSV----------K  139 (245)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS---------BTTT----------B
T ss_pred             EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeech---------hhcc----------C
Confidence            77766433211      145667899999999888877653  1123456655531         1100          0


Q ss_pred             CCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          171 PRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       171 p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                      + .+ ....|+.        .+.++..+ ...|+++..+.|+.|-.
T Consensus       140 ~-~~-~~~~Y~~sKaal~~l~r~lA~e~-~~~gIrvN~I~PG~i~T  182 (245)
T d2ag5a1         140 G-VV-NRCVYSTTKAAVIGLTKSVAADF-IQQGIRCNCVCPGTVDT  182 (245)
T ss_dssp             C-CT-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCEEC
T ss_pred             C-cc-chhHHHHHHHHHHHHHHHHHHHh-hhhCcEEEEEeeceeec
Confidence            0 01 1122553        23333333 46789999999998876

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.98  E-value=1.7e-09  Score=94.95  Aligned_cols=157  Identities=15%  Similarity=0.005  Sum_probs=97.7

Q ss_pred             CCCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           24 SYQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        24 ~~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      ..+|++|||||+|  -||..++++|++     .|++|++..|+....      .........+++|++|+++++++++. 
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~-----~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKE-----AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            3568999999998  699999999999     899998888864321      00123567899999999887666543 


Q ss_pred             ------CCCeeEEEEeccc---C---CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCC
Q 015961           95 ------LTDVTHIFYVTWT---N---RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        95 ------~~~V~h~a~~~~~---~---~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                            +|.++|.|+....   .   .+    +....+++|+.++..+.+++...-.+-.+++.+||....      .+ 
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~------~~-  153 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE------KV-  153 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT------SB-
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc------CC-
Confidence                  4445555442110   0   01    234567899999988888776542122445655532111      00 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                    .|. ...|+.        .+.++..+ ..+|+++..+.|+.|.-
T Consensus       154 --------------~~~-~~~Y~asKaal~~ltr~lA~el-a~~gIrVN~I~PG~i~t  195 (256)
T d1ulua_         154 --------------VPK-YNVMAIAKAALEASVRYLAYEL-GPKGVRVNAISAGPVRT  195 (256)
T ss_dssp             --------------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCC--
T ss_pred             --------------CCC-chHHHHHHHHHHHHHHHHHHHh-cccCCEEeeeccceeee
Confidence                          011 122553        34444444 46789999999998876

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.97  E-value=4.1e-10  Score=97.79  Aligned_cols=153  Identities=12%  Similarity=0.075  Sum_probs=99.3

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcE-------EEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWK-------VYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-------V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      -||||||++-||.+++++|.+     +|++       |++.+|+....       ......+..+.+|++|+++++++++
T Consensus         3 VvlITGas~GIG~aia~~la~-----~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~   77 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFAR-----AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTT   77 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHH-----HTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHH-----hCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            479999999999999999998     7776       88888875321       0112456789999999987766553


Q ss_pred             -------cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCC
Q 015961           94 -------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  158 (397)
Q Consensus        94 -------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  158 (397)
                             .+|.++|.|+......      ++.+..+++|+.|+..+.+++...  ..+-.+++.+||...+.      + 
T Consensus        78 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------~-  150 (240)
T d2bd0a1          78 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK------A-  150 (240)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C-
T ss_pred             HHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC------C-
Confidence                   3566777665432111      145677899999998888777654  11235667666432111      0 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          159 IKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       159 ~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                           .         |. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       151 -----~---------~~-~~~Y~asK~al~~lt~~la~el-~~~gIrvn~i~PG~v~T  192 (240)
T d2bd0a1         151 -----F---------RH-SSIYCMSKFGQRGLVETMRLYA-RKCNVRITDVQPGAVYT  192 (240)
T ss_dssp             -----C---------TT-CHHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCBCS
T ss_pred             -----C---------CC-ChHHHHHHHHHHHHHHHHHHHh-CcCCeEEEEeeeCcccC
Confidence                 0         11 112553        34444444 56789999999998754

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.96  E-value=5.8e-10  Score=98.36  Aligned_cols=104  Identities=17%  Similarity=0.155  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS-   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~-   93 (397)
                      .+|.+|||||++-||..++++|++     +|++|++.+|+....          .....++..+.+|++|.++++++++ 
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~   78 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAR-----EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST   78 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHH
Confidence            568999999999999999999999     899999999975321          0122358899999999987766554 


Q ss_pred             ------cCCCeeEEEEecccC--C--------CcHHHHHHhHHHHHHHHHHHHccc
Q 015961           94 ------QLTDVTHIFYVTWTN--R--------STEAENCKINGSMFRNVLRAVIPN  133 (397)
Q Consensus        94 ------~~~~V~h~a~~~~~~--~--------~~~~~~~~~nv~gt~~ll~a~~~~  133 (397)
                            .+|.++|.|+.....  .        ++.+..+++|+.++.++.+++...
T Consensus        79 ~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~  134 (264)
T d1spxa_          79 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH  134 (264)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCc
Confidence                  467777776542211  0        134567889999998888877653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.94  E-value=1e-09  Score=96.01  Aligned_cols=117  Identities=15%  Similarity=0.007  Sum_probs=82.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc------
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS------   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~------   93 (397)
                      ..+|++|||||++-||..+++.|++     +|++|++.+|+....    .....+..++++|++|.+++++.++      
T Consensus         4 L~gK~alITGas~GIG~aia~~la~-----~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLG-----EGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            3568999999999999999999999     899999999975321    0012456788999999987665543      


Q ss_pred             -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecC
Q 015961           94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG  145 (397)
Q Consensus        94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~  145 (397)
                       .+|.++|.|+......      ++.+..+++|+.++..+.+++... ..+--+++.+||
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS  138 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMAS  138 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccc
Confidence             4566777766432211      145677899999988887776554 222366777764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=6.1e-09  Score=92.64  Aligned_cols=154  Identities=19%  Similarity=0.127  Sum_probs=95.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE---eCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV---ARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l---~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      |-||||||++-||.++++.|++     .|.+|+.+   .|+....          .....++..+.+|++|.+++..++.
T Consensus         3 kVvlITGassGIG~a~A~~la~-----~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   77 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLAS-----DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARE   77 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHT-----CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHH-----CCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhh
Confidence            4578999999999999999998     77764444   4442211          1123468899999999999888776


Q ss_pred             cC-----CCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961           94 QL-----TDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  160 (397)
Q Consensus        94 ~~-----~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  160 (397)
                      .+     |.+++.++......      +..+..+++|+.|+.++.+++...  ..+-.+++.+||....      .+   
T Consensus        78 ~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~------~~---  148 (285)
T d1jtva_          78 RVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL------MG---  148 (285)
T ss_dssp             TCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT------SC---
T ss_pred             hccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc------CC---
Confidence            54     33444443222111      144667899999988888776543  1123566666542211      11   


Q ss_pred             CCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          161 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       161 ~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                         .         |. ...|+.        .+.++..+ ...|+++..+.|+.|--
T Consensus       149 ---~---------~~-~~~Y~asKaal~~l~~~la~El-~~~gIrVn~V~PG~v~T  190 (285)
T d1jtva_         149 ---L---------PF-NDVYCASKFALEGLCESLAVLL-LPFGVHLSLIECGPVHT  190 (285)
T ss_dssp             ---C---------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC
T ss_pred             ---C---------CC-chHHHHHHHHHHHHHHHHHHHh-hccCcEEEEEecCCCCC
Confidence               0         11 122553        33333333 56789999999998753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.86  E-value=6.6e-09  Score=89.79  Aligned_cols=112  Identities=11%  Similarity=-0.021  Sum_probs=72.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHH-------HHc--cCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQA-------KLS--QLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~-------~~~--~~~   96 (397)
                      +|+||||||+|-||.++++.|++     +|++|++++|......   .....+.+|..+.+..+.       .+.  .+|
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~-----~G~~V~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRA-----RNWWVASIDVVENEEA---SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSCCTTS---SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCccccc---cccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            58999999999999999999999     8999999998654321   222344556555443222       222  245


Q ss_pred             CeeEEEEecc--cC-CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           97 DVTHIFYVTW--TN-RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        97 ~V~h~a~~~~--~~-~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                      .++|.|+...  .. ..    ..+..+++|+.++.++.+++...-.+-.+++++||
T Consensus        74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS  129 (236)
T d1dhra_          74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  129 (236)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEcc
Confidence            5677665211  11 11    23556799999998888877654222356676664

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=8.3e-09  Score=90.50  Aligned_cols=160  Identities=12%  Similarity=-0.007  Sum_probs=98.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHccC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      .+|.++||||++-||..++++|.+..  .+|++|++++|+....         .....++..+.+|++|++++++++..+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~--~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLL--SPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTB--CTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcc--cCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            35778999999999999999996310  0699999999975321         011235778999999998877765321


Q ss_pred             ------C-----CeeEEEEeccc-CC----C----cHHHHHHhHHHHHHHHHHHHcccC----CCcceEEEecCCccccc
Q 015961           96 ------T-----DVTHIFYVTWT-NR----S----TEAENCKINGSMFRNVLRAVIPNA----PNLRHVCLQTGTKHYLG  151 (397)
Q Consensus        96 ------~-----~V~h~a~~~~~-~~----~----~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~~~~~s~~~~y~s  151 (397)
                            +     .+++.|+.... ..    +    ..+..+++|+.++..+.+++...-    ..-.+++.+||...+. 
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~-  161 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC-
Confidence                  1     13333332111 11    1    345678999999999988876541    1235677776422110 


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          152 PFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       152 s~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                   +       .|. ...|+.     ..+.+....+..|+++..+.|+.|-.
T Consensus       162 -------------~-------~~~-~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T  202 (259)
T d1oaaa_         162 -------------P-------YKG-WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN  202 (259)
T ss_dssp             -------------C-------CTT-CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred             -------------C-------Ccc-chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence                         0       011 122553     22222222246789999999988865

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.82  E-value=8.2e-09  Score=89.14  Aligned_cols=112  Identities=13%  Similarity=0.023  Sum_probs=72.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHH-------HHH--ccCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ-------AKL--SQLT   96 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~-------~~~--~~~~   96 (397)
                      ..|||||||+|-||.+++++|++     +|++|++++|++....   .....+.+|..+.+...       ..+  ..+|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~-----~G~~V~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKK-----NGYTVLNIDLSANDQA---DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHH-----TTEEEEEEESSCCTTS---SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCchhcc---cccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            35899999999999999999999     8999999999865421   22334566766554322       222  2245


Q ss_pred             CeeEEEEeccc--CC--C---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961           97 DVTHIFYVTWT--NR--S---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  145 (397)
Q Consensus        97 ~V~h~a~~~~~--~~--~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  145 (397)
                      .++|.|+....  ..  .   ..+..+++|+.++..+.+++...-.+-.+++.+||
T Consensus        74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS  129 (235)
T d1ooea_          74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA  129 (235)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEecc
Confidence            57776653111  11  1   23446789999988888777654212245666654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.79  E-value=2.6e-09  Score=94.63  Aligned_cols=103  Identities=17%  Similarity=0.109  Sum_probs=74.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------   93 (397)
                      .+|+||||||++-||.+++++|++     +|++|++.+|+....  .  ....++..+.+|+++.+++++++.       
T Consensus         4 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVA-----EGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999     899999999975321  0  011357789999999987766543       


Q ss_pred             cCCCeeEEEEecccC-------CC----cHHHHHHhHHHHHHHHHHHHcc
Q 015961           94 QLTDVTHIFYVTWTN-------RS----TEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~-------~~----~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                      .+|.++|.|+.....       .+    ..+..+++|+.++..+.+++..
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p  128 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLP  128 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHH
Confidence            456666666532111       11    2456789999998888776654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.77  E-value=7.1e-10  Score=97.05  Aligned_cols=153  Identities=14%  Similarity=0.050  Sum_probs=94.4

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHH-------HccCCCee
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAK-------LSQLTDVT   99 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~-------~~~~~~V~   99 (397)
                      ++|||||++.||..+++.|.+     .|++|++.+|+..... .......+..+|++|.++++++       +..+|.++
T Consensus         2 TAlVTGas~GiG~aiA~~la~-----~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSE-----AGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHH-----TTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            689999999999999999999     8999999998654310 0000112446777776544333       34567777


Q ss_pred             EEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961          100 HIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  170 (397)
Q Consensus       100 h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~  170 (397)
                      |.|+......   +    +.+..+++|+.++.++.+++...  ..+-.+++.+||...+       .       +     
T Consensus        77 nNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~-------~-------~-----  137 (252)
T d1zmta1          77 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF-------G-------P-----  137 (252)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT-------S-------C-----
T ss_pred             ECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccc-------c-------c-----
Confidence            7765432111   1    34567789999988888776543  1123456766642211       1       0     


Q ss_pred             CCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          171 PRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       171 p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                        .+. ...|+.        .+.++..+ ...|+++..+.|+.|-.
T Consensus       138 --~~~-~~~Y~asKaal~~lt~~lA~el-a~~gIrVN~I~PG~i~T  179 (252)
T d1zmta1         138 --WKE-LSTYTSARAGACTLANALSKEL-GEYNIPVFAIGPNYLHS  179 (252)
T ss_dssp             --CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTCCEEEEEESSBCC
T ss_pred             --ccc-ccccccccccHHHHHHHHHHHh-cccCcEEEEEecCCCcC
Confidence              011 112542        44444444 56789999999999876

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.7e-09  Score=95.93  Aligned_cols=118  Identities=15%  Similarity=0.035  Sum_probs=81.2

Q ss_pred             CCEE-EEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961           26 QSVA-LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   93 (397)
Q Consensus        26 ~~~I-LVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----   93 (397)
                      +|+| |||||++-||..++++|++.    .|++|++.+|+....      + ....++.++.+|++|.++++++++    
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~----~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~   77 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRL----FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK   77 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHH----SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHh----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHH
Confidence            4666 89999999999999999861    388999999985421      0 122568899999999987765443    


Q ss_pred             ---cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCc
Q 015961           94 ---QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTK  147 (397)
Q Consensus        94 ---~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~  147 (397)
                         .+|.++|.|+......  +    +.+..+++|+.|+..+.+++...-++-.+++.+||..
T Consensus        78 ~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          78 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             hcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence               3455666555432211  1    2345688999999999998866422224677777643

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=6.5e-09  Score=91.74  Aligned_cols=111  Identities=14%  Similarity=0.090  Sum_probs=74.9

Q ss_pred             cccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCH
Q 015961           14 KKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDP   85 (397)
Q Consensus        14 ~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~   85 (397)
                      .+|+   |....+|++||||||+-||.+++++|++     +|++|++++|+....        ......+..+.+|+.+.
T Consensus         5 ~~f~---~~~L~GK~alITGassGIG~aiA~~la~-----~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~   76 (269)
T d1xu9a_           5 EEFR---PEMLQGKKVIVTGASKGIGREMAYHLAK-----MGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM   76 (269)
T ss_dssp             SCCC---GGGGTTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH
T ss_pred             ccCC---ccccCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhH
Confidence            4554   3346789999999999999999999999     899999999975321        01123566888999988


Q ss_pred             HHHHHHHc-------cCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHcc
Q 015961           86 EETQAKLS-------QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIP  132 (397)
Q Consensus        86 ~~l~~~~~-------~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~  132 (397)
                      +.......       ..|.+++.|+......    +  .....+++|+.++..+.+++..
T Consensus        77 ~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp  136 (269)
T d1xu9a_          77 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALP  136 (269)
T ss_dssp             HHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHH
Confidence            76544332       2444444443221111    1  3355678999998887776654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.3e-07  Score=82.06  Aligned_cols=158  Identities=13%  Similarity=0.020  Sum_probs=98.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC----CCCCceEEEccCCCHHHHHHHHc-----
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----ADHLVEYVQCDVSDPEETQAKLS-----   93 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~~~v~~~~~Dl~d~~~l~~~~~-----   93 (397)
                      ...+|.+|||||++-||..++++|++     +|++|++++|+......    .........+|+.+.+.++....     
T Consensus         2 slkGKvalITGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVG-----QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccc
Confidence            34679999999999999999999999     89999999997643200    11356788899998865544332     


Q ss_pred             --cCCCeeEEEEecccC-----C-------CcHHHHHHhHHHHHHHHHHHHccc--------CCCcceEEEecCCccccc
Q 015961           94 --QLTDVTHIFYVTWTN-----R-------STEAENCKINGSMFRNVLRAVIPN--------APNLRHVCLQTGTKHYLG  151 (397)
Q Consensus        94 --~~~~V~h~a~~~~~~-----~-------~~~~~~~~~nv~gt~~ll~a~~~~--------~~~~~~~~~~s~~~~y~s  151 (397)
                        ..|.+.+.+......     .       +..+..+++|+.++.++.+++...        ..+-.+++++||...+.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence              234333332211100     0       134567899999998888877442        112346777765332211


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961          152 PFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  208 (397)
Q Consensus       152 s~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G  208 (397)
                                           .|. ...|+.        .+.++..+ ...|+++..+.|+.+.-
T Consensus       157 ---------------------~~~-~~~Y~asKaal~~lt~~la~e~-~~~gIrvN~I~PG~i~T  198 (248)
T d2o23a1         157 ---------------------QVG-QAAYSASKGGIVGMTLPIARDL-APIGIRVMTIAPGLFGT  198 (248)
T ss_dssp             ---------------------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC
T ss_pred             ---------------------CCC-chHHHHHHHHHHHHHHHHHHHh-cccCcceeeeccCceec
Confidence                                 011 112543        34444443 46789999999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.73  E-value=2.5e-07  Score=79.64  Aligned_cols=204  Identities=16%  Similarity=0.097  Sum_probs=115.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc----CC--Cee
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ----LT--DVT   99 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~----~~--~V~   99 (397)
                      .|++|||||++-||.+++++|++     .|++|++.+|+...     .+...+++|+.+..........    ..  .+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~-----~Ga~V~i~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKA-----RGYRVVVLDLRREG-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----HTCEEEEEESSCCS-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCccc-----ccceEeeccccchhhhHHHHHhhhccccccchh
Confidence            47899999999999999999999     89999999997543     3566789999988655444322    11  111


Q ss_pred             EEEEecc------cCC----CcHHHHHHhHHHHHHHHHHHHccc--------CCCcceEEEecCCccccccccccCCCCC
Q 015961          100 HIFYVTW------TNR----STEAENCKINGSMFRNVLRAVIPN--------APNLRHVCLQTGTKHYLGPFEAFGKIKP  161 (397)
Q Consensus       100 h~a~~~~------~~~----~~~~~~~~~nv~gt~~ll~a~~~~--------~~~~~~~~~~s~~~~y~ss~~~~g~~~~  161 (397)
                      +.++...      ...    +..+..+++|+.+..++...+...        ..+-.+++.+||...+...         
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---------  141 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ---------  141 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC---------
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC---------
Confidence            1111100      000    133556788988887776655332        1123567777653322110         


Q ss_pred             CCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961          162 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  233 (397)
Q Consensus       162 ~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  233 (397)
                                  +. ...|+.        .+.++..+ ..+|+++..+.|+.|--+.......  ...   ....  ...
T Consensus       142 ------------~~-~~~Y~asKaal~~lt~~lA~el-a~~gIrVN~V~PG~i~T~~~~~~~~--~~~---~~~~--~~~  200 (241)
T d1uaya_         142 ------------IG-QAAYAASKGGVVALTLPAAREL-AGWGIRVVTVAPGLFDTPLLQGLPE--KAK---ASLA--AQV  200 (241)
T ss_dssp             ------------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSCSSHHHHTSCH--HHH---HHHH--TTC
T ss_pred             ------------CC-chhhHHHHHHHHHHHHHHHHHH-hhcCCceeeecCCcccccccchhhh--hHH---HHHH--hcC
Confidence                        11 112543        34444443 4678999999999886521111110  000   0001  122


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCC
Q 015961          234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD  280 (397)
Q Consensus       234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~  280 (397)
                      |  ..+         -.....++|..+++++.....-|+++++.+|-
T Consensus       201 ~--~~~---------R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~  236 (241)
T d1uaya_         201 P--FPP---------RLGRPEEYAALVLHILENPMLNGEVVRLDGAL  236 (241)
T ss_dssp             C--SSC---------SCCCHHHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred             C--CCC---------CCcCHHHHHHHHHHHHhCCCCCCCEEEECCcc
Confidence            2  111         12234556777777776544568888886653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.73  E-value=1.9e-08  Score=90.05  Aligned_cols=154  Identities=12%  Similarity=0.039  Sum_probs=98.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--C-----------CCCceEEEccCCCHHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--A-----------DHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~-----------~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      .+|.+|||||++-||..++++|++     +|++|++.+|+......  .           ........+|+.|.+++++.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~-----~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAE-----RGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH
Confidence            468999999999999999999999     89999999886532210  0           01234667888887654433


Q ss_pred             H-------ccCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCcccccccccc
Q 015961           92 L-------SQLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAF  156 (397)
Q Consensus        92 ~-------~~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~  156 (397)
                      +       ..+|.++|.|+......      ++.+..+++|+.|+.++.+++...  ..+--+|+.+||...+      +
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~------~  154 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI------Y  154 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH------H
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc------C
Confidence            3       34677777766432211      145678899999999888876553  1123577777653322      1


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCce
Q 015961          157 GKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTI  206 (397)
Q Consensus       157 g~~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v  206 (397)
                      |.               +. ...|+.        .+.++... ..+|+++..+-|+.+
T Consensus       155 ~~---------------~~-~~~Y~asKaal~~lt~~la~E~-~~~gIrVN~I~PG~~  195 (302)
T d1gz6a_         155 GN---------------FG-QANYSAAKLGLLGLANTLVIEG-RKNNIHCNTIAPNAG  195 (302)
T ss_dssp             CC---------------TT-CHHHHHHHHHHHHHHHHHHHHT-GGGTEEEEEEEEECC
T ss_pred             CC---------------CC-cHHHHHHHHHHHHHHHHHHHHH-hccCCceeeeCCCCC
Confidence            11               11 122553        34444433 567899999998755

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=98.65  E-value=2.8e-07  Score=80.32  Aligned_cols=213  Identities=10%  Similarity=0.042  Sum_probs=117.8

Q ss_pred             CCCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc-
Q 015961           24 SYQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ-   94 (397)
Q Consensus        24 ~~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~-   94 (397)
                      ..+|+||||||+|  -||+++++.|++     +|++|++..|+....      ............|+.+..+....+.. 
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~-----~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAEL   77 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHH-----TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHh
Confidence            3578999999999  699999999999     899999999975321      00123567889999998766554432 


Q ss_pred             ---CC---CeeEEEEecccCC---C--------cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccC
Q 015961           95 ---LT---DVTHIFYVTWTNR---S--------TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG  157 (397)
Q Consensus        95 ---~~---~V~h~a~~~~~~~---~--------~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g  157 (397)
                         ..   .++|.++......   .        .......+|+.+...+++++.....+-..++.+|+...      ..+
T Consensus        78 ~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~------~~~  151 (258)
T d1qsga_          78 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA------ERA  151 (258)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG------TSB
T ss_pred             hhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhh------ccC
Confidence               22   2444433221111   0        12334567888888888877665222233454443110      101


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhh
Q 015961          158 KIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK  229 (397)
Q Consensus       158 ~~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~  229 (397)
                                     .|. ...|+.        .+.++..+ ..+|+++..+.|+.|.-+-....... ...  .....+
T Consensus       152 ---------------~~~-~~~Y~~sKaal~~ltr~lA~el-~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~--~~~~~~  211 (258)
T d1qsga_         152 ---------------IPN-YNVMGLAKASLEANVRYMANAM-GPEGVRVNAISAGPIRTLAASGIKDF-RKM--LAHCEA  211 (258)
T ss_dssp             ---------------CTT-TTHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCCCCTTGGGSTTH-HHH--HHHHHH
T ss_pred             ---------------CCC-cHHHHHHHHHHHHHHHHHHHHh-CccCceeecccccccccccccccchh-hhH--HHHHHh
Confidence                           011 112553        34444444 56789999999999976321111111 111  011111


Q ss_pred             hcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCe
Q 015961          230 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDV  281 (397)
Q Consensus       230 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~  281 (397)
                        ..|+.         .   .....++|..+++++.+  ....|+++.+.+|-.
T Consensus       212 --~~pl~---------R---~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         212 --VTPIR---------R---TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             --HSTTS---------S---CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCCC---------C---CcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence              11211         1   12345557777777643  235688888877643

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.62  E-value=2.3e-09  Score=89.55  Aligned_cols=77  Identities=17%  Similarity=0.058  Sum_probs=63.8

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      .+..+|+||||||+|.||..+++.|.+     .|++|++++|+..+.      ......+.+..+|+.|.+++.+.+.++
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i   93 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAG-----EGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA   93 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHh-----hccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCc
Confidence            355779999999999999999999999     899999999985321      111135567899999999999999999


Q ss_pred             CCeeEEEE
Q 015961           96 TDVTHIFY  103 (397)
Q Consensus        96 ~~V~h~a~  103 (397)
                      |.|+|.++
T Consensus        94 Dilin~Ag  101 (191)
T d1luaa1          94 HFVFTAGA  101 (191)
T ss_dssp             SEEEECCC
T ss_pred             CeeeecCc
Confidence            99998865

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=98.52  E-value=1.8e-06  Score=75.70  Aligned_cols=64  Identities=16%  Similarity=-0.027  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHH
Q 015961           24 SYQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        24 ~~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      ..+|++|||||+|  -||.+++++|++     +|++|++++|++...      ........+..+|+++.+++.+++
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~-----~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~   74 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFN-----QGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLY   74 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHT-----TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHH
Confidence            4579999999988  699999999999     899999999975321      001245668899999997765555

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.37  E-value=1.9e-06  Score=75.30  Aligned_cols=63  Identities=10%  Similarity=-0.042  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCCh--hHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHH
Q 015961           24 SYQSVALIVGVTGI--VGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAK   91 (397)
Q Consensus        24 ~~~~~ILVtGatGf--iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~   91 (397)
                      ..+|+||||||+|.  ||.+++++|.+     +|++|++..|+..+.     .....+...+++|+++.+++.++
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~-----~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~   73 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQE-----QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASL   73 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHH-----TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHH-----cCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccc
Confidence            45789999998764  99999999999     899999999875321     11224567899999998655443

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.33  E-value=4.3e-06  Score=74.12  Aligned_cols=36  Identities=17%  Similarity=0.070  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           24 SYQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        24 ~~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ..+|++|||||+|  -||..+++.|++     +|++|++..|.
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~-----~Ga~Vvi~~~~   43 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAA-----AGAEILVGTWV   43 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEEEH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHH-----CCCEEEEEeCc
Confidence            3568999999987  799999999999     89999988874

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.17  E-value=2e-05  Score=69.09  Aligned_cols=99  Identities=16%  Similarity=0.043  Sum_probs=63.1

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CC---------------CCCCceEEEcc
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WN---------------ADHLVEYVQCD   81 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~---------------~~~~v~~~~~D   81 (397)
                      -+|||||++-||.++++.|++     .|++|++..|+....           ..               ....+....+|
T Consensus         4 VAlITGas~GIG~aiA~~la~-----~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d   78 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHA-----EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   78 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeeccccccccccccccccc
Confidence            479999999999999999999     899999888764210           00               01123345677


Q ss_pred             CCCHHHHHHHH-------ccCCCeeEEEEecccCC--C-c-----------------HHHHHHhHHHHHHHHHHHHc
Q 015961           82 VSDPEETQAKL-------SQLTDVTHIFYVTWTNR--S-T-----------------EAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        82 l~d~~~l~~~~-------~~~~~V~h~a~~~~~~~--~-~-----------------~~~~~~~nv~gt~~ll~a~~  131 (397)
                      +++.+++++++       ..+|.++|.|+......  + +                 ....+.+|+.+...+.+++.
T Consensus        79 v~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  155 (284)
T d1e7wa_          79 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  155 (284)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecccc
Confidence            88887776654       35677777766432110  0 0                 11256788888887777653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.95  E-value=5e-06  Score=65.03  Aligned_cols=110  Identities=15%  Similarity=0.105  Sum_probs=73.4

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  103 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~  103 (397)
                      ||.|+||+|.+|+.++..|...+...   +++.++..+...    ............-+ ...+..+.++++|.|+..|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~---elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVS---RLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCS---EEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccc---eEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhCCCCEEEECCC
Confidence            79999999999999999998743332   688888754211    00001111111111 23445677899998877766


Q ss_pred             ecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961          104 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  141 (397)
Q Consensus       104 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  141 (397)
                      ....+..+..+.++.|+...+.+++.+.+++++...++
T Consensus        78 ~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiiv  115 (144)
T d1mlda1          78 VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI  115 (144)
T ss_dssp             CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            54444447788899999999999999999875544333

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.92  E-value=1.2e-05  Score=69.53  Aligned_cols=89  Identities=15%  Similarity=0.199  Sum_probs=58.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH----cc----CCCe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL----SQ----LTDV   98 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~----~~----~~~V   98 (397)
                      |.||||||++-||.+++++|++     .|++|++++|+...          ...|+.+.+......    ..    +|.+
T Consensus         2 kVvlITGas~GIG~aiA~~la~-----~Ga~V~~~~~~~~~----------~~~d~~~~~~~~~~~~~~~~~~~~~id~l   66 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEA-----AGHQIVGIDIRDAE----------VIADLSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSSSS----------EECCTTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECChHH----------HHHHhcCHHHHHHHHHHHHHHhCCCCcEE
Confidence            6799999999999999999999     89999999987432          256777765443322    22    3334


Q ss_pred             eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHc
Q 015961           99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVI  131 (397)
Q Consensus        99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~  131 (397)
                      ++.|+. ............+|..+...+.+...
T Consensus        67 v~~Ag~-~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (257)
T d1fjha_          67 VLCAGL-GPQTKVLGNVVSVNYFGATELMDAFL   98 (257)
T ss_dssp             EECCCC-CTTCSSHHHHHHHHTHHHHHHHHHHH
T ss_pred             EEcCCC-CCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            444332 11222345556778777776665443

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.86  E-value=1.8e-05  Score=68.71  Aligned_cols=72  Identities=15%  Similarity=0.099  Sum_probs=49.1

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCH----HHHHH----
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDP----EETQA----   90 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~----~~l~~----   90 (397)
                      .+|||||++-||..++++|++     .|++|++++|+....       .  ........+..|+.+.    +.+.+    
T Consensus         3 vAlVTGas~GIG~aia~~la~-----~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQ-----QGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   77 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHH
Confidence            579999999999999999999     899999999975321       0  0123455666666432    22222    


Q ss_pred             ---HHccCCCeeEEEEe
Q 015961           91 ---KLSQLTDVTHIFYV  104 (397)
Q Consensus        91 ---~~~~~~~V~h~a~~  104 (397)
                         .+..+|.++|.|+.
T Consensus        78 ~~~~~g~iDilvnnAG~   94 (266)
T d1mxha_          78 SFRAFGRCDVLVNNASA   94 (266)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHhCCCCEEEECCcc
Confidence               33457777777664

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.74  E-value=3.5e-05  Score=62.15  Aligned_cols=109  Identities=15%  Similarity=0.037  Sum_probs=68.1

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCC----------CCCCCCceE-EEccCCCHHHH
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPN----------WNADHLVEY-VQCDVSDPEET   88 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~----------~~~~~~v~~-~~~Dl~d~~~l   88 (397)
                      +.....||.||||+|.||++|+-.|.+..-.+  ....++.++......          ....+.... +.++     +.
T Consensus        20 ~~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~-----~~   94 (175)
T d7mdha1          20 SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGI-----DP   94 (175)
T ss_dssp             -CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES-----CH
T ss_pred             ccCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccc-----cc
Confidence            33344589999999999999999987522110  122456666543210          001112221 1111     23


Q ss_pred             HHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961           89 QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus        89 ~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                      .+.++++|.|+-+++....+..+..+.+..|..-.+.+.+++.+..+
T Consensus        95 ~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~  141 (175)
T d7mdha1          95 YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVAS  141 (175)
T ss_dssp             HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             hhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            56788898877776544334447888999999999999999998754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.64  E-value=6.5e-06  Score=63.56  Aligned_cols=64  Identities=16%  Similarity=0.143  Sum_probs=50.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHH-HccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~   96 (397)
                      |+|+|.|+ |.+|++|++.|.+     .|++|+++++++...  .....++.++.||.+|++.+.++ +..++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~-----~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~   67 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSE-----KGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDAD   67 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----CCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhh
Confidence            58999996 9999999999998     899999999876421  10112678999999999988765 34444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.58  E-value=0.00012  Score=57.00  Aligned_cols=103  Identities=13%  Similarity=0.045  Sum_probs=67.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +||.|+||+|.+|+.++..|...+..   -++..+++.+...             ......++....--.|.    +.++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~---~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~   73 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFM---KDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIID   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTC---CEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcc---cccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhc
Confidence            47999999999999999999873322   2899998864210             11112333322111122    3467


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  136 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  136 (397)
                      ++|.|+-.|+....+..+..+.++.|..-.+.+.+.+.+.+++
T Consensus        74 ~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~  116 (145)
T d1hyea1          74 ESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDT  116 (145)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             cceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCC
Confidence            7887776655433333467888999999999999999887643

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.52  E-value=4.7e-05  Score=61.55  Aligned_cols=68  Identities=19%  Similarity=0.201  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQLTDVT   99 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~   99 (397)
                      .|+|||.|| |++|+++++.|.+     +||+|++++|.....  . ...........+..+.......+...+.++
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~-----~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i   72 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTD-----SGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVI   72 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHT-----TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeE
Confidence            489999996 9999999999999     899999999986432  0 011344455566667677777777666443

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.51  E-value=0.00023  Score=63.59  Aligned_cols=34  Identities=21%  Similarity=0.116  Sum_probs=29.2

Q ss_pred             CCEEEEEc--CCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           26 QSVALIVG--VTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        26 ~~~ILVtG--atGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      +|.+||||  ++.-||..+++.|.+     +|.+|++..+.
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~-----~GA~V~i~~~~   37 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSK-----RNVKIIFGIWP   37 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEECG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHH-----cCCEEEEEeCc
Confidence            46789999  556899999999999     89999987764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.47  E-value=0.00014  Score=56.37  Aligned_cols=101  Identities=16%  Similarity=0.091  Sum_probs=68.8

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--C----------CCCCCCceEEEccCCCHHHHHHHHccC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N----------WNADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      ||.|+||+|.+|+.++..|...+...   ++..++.....  .          .......++..+|.   +    .+.++
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~---el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~a   71 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIAD---EVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGS   71 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCS---EEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCC---EEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----Hhhhc
Confidence            79999999999999999998743322   78888853211  0          01123444555553   2    25788


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      |.|+-.|+....+..+..+.++.|..-.+.+.+.+.+.+++..
T Consensus        72 DiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i  114 (142)
T d1o6za1          72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYI  114 (142)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCE
T ss_pred             CEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCce
Confidence            8777665543333346788999999999999999998865544

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.46  E-value=0.00019  Score=55.65  Aligned_cols=103  Identities=15%  Similarity=0.055  Sum_probs=64.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +||.|+|| |++|+.++-.|+..+..   .+++++++.+...          ...........+|   .    +.++++|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~---~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~ad   70 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTA---NELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y----SDVKDCD   70 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCS---SEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G----GGGTTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H----HHhCCCc
Confidence            57999996 99999999998874322   2899999876432          1111223333332   2    3467788


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  140 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  140 (397)
                      .|+-.|+....+..+..+....|+.-.+.+.+.+.+++++-..+
T Consensus        71 ivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~i  114 (142)
T d1y6ja1          71 VIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVIL  114 (142)
T ss_dssp             EEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred             eEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEE
Confidence            66666553333334678888999999999999999876554333

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.45  E-value=4.1e-05  Score=59.80  Aligned_cols=103  Identities=11%  Similarity=0.016  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHcc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      .++||.|.|+ |++|+.++..|+..+.   ..+|+++++.+...          ...........+|.       +.+.+
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~---~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~   72 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGI---AEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKD   72 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTC---CSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCC---CcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhcc
Confidence            3569999995 9999999999987321   24899999875211          01112334555554       23678


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      +|.|+.+++.......+..+....|+.-.+.+.+.+.+.+++..
T Consensus        73 adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~ai  116 (146)
T d1ez4a1          73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGI  116 (146)
T ss_dssp             CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred             ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcE
Confidence            88777765533323335677788999999999999998765443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00046  Score=53.48  Aligned_cols=104  Identities=13%  Similarity=0.110  Sum_probs=67.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccC-CCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPL-PDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~-~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      +||.|+||+|.+|++++-.|.. .+   ...++..++..+...       . ........+ ..-.+    .+.++++|.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~---~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~----~~~~~~aDv   72 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLP---SGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDA----TPALEGADV   72 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSC---TTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCC----HHHHTTCSE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCC---CCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCC----ccccCCCCE
Confidence            4899999999999999887743 12   245899998754211       0 001111111 11122    245788888


Q ss_pred             eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      |+.+++....+..+..+....|..-.+.+.+.+.+.+++-.
T Consensus        73 vvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~ai  113 (145)
T d2cmda1          73 VLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKAC  113 (145)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             EEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcE
Confidence            77776543333347788899999999999999998876544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.31  E-value=0.00014  Score=56.93  Aligned_cols=103  Identities=15%  Similarity=0.069  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      .++||.|+|| |++|+.++..|...+..   -++..+++.+...           .+....+.+...|.       +.+.
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~   73 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIA---DEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCR   73 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCC---SEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTT
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCC---ceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhc
Confidence            3468999996 99999999999873222   2799999864321           11123444545553       3467


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      ++|.|+..++..........+....|..-.+.+.+.+.+++++..
T Consensus        74 daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~  118 (148)
T d1ldna1          74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGL  118 (148)
T ss_dssp             TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSE
T ss_pred             cceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCce
Confidence            788776665433223336678889999999999999988876543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.29  E-value=0.00062  Score=53.46  Aligned_cols=106  Identities=14%  Similarity=0.087  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCC--CcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +.||.|+||+|++|++++..|...+....  ......+.-.....          .........+...-    ...+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD----DPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES----CHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC----chhhhcc
Confidence            35899999999999999999987433211  11122222211100          01112233333321    1246788


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                      ++|.|+-.++....+..+..+.+..|+.-.+.+.+.+.+..+
T Consensus        80 ~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~  121 (154)
T d1y7ta1          80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK  121 (154)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             cccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            888777776544333447788899999999999999988643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.25  E-value=6.2e-05  Score=57.89  Aligned_cols=67  Identities=16%  Similarity=0.135  Sum_probs=51.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~   99 (397)
                      |+++|.| .|.+|+++++.|.+     .|++|++++.++... .....+...+.+|.++++.+.++ +..++.|+
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~-----~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi   69 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHR-----MGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVI   69 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHH-----TTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEE
Confidence            5788998 59999999999998     899999999876431 11234667889999999988776 66666433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.13  E-value=0.00014  Score=59.38  Aligned_cols=35  Identities=26%  Similarity=0.235  Sum_probs=32.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      |||.|+||+|.+|+.|++.|.+     .||+|++.+|++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~-----~G~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLAT-----LGHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHH-----CCCEEEEEECCHH
Confidence            4799999999999999999999     8999999999753

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.95  E-value=0.00073  Score=53.00  Aligned_cols=106  Identities=16%  Similarity=0.056  Sum_probs=61.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +.||.|+||+|.+|++++-.|.+.......  .+++.++......          ....+....+.+-  +  ...+.+.
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~--~~~~~~~   78 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT--D--KEEIAFK   78 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE--S--CHHHHTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC--c--ccccccC
Confidence            358999999999999999988752211111  2345554432110          0001122222211  1  1345678


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  135 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  135 (397)
                      ++|.|+-.++....+..+..+.++.|..-.+.+.+.+.++.+
T Consensus        79 ~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~  120 (154)
T d5mdha1          79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAK  120 (154)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSC
T ss_pred             CceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCC
Confidence            888666664433333336677889999999999998877643

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.87  E-value=0.00077  Score=52.10  Aligned_cols=102  Identities=13%  Similarity=0.011  Sum_probs=66.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC---CCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN---ADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~---~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      +||.|+|| |.+|+.++..|...+..   .++.+++..+...        ..   .....++...+  |.    +.++++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~---~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~da   70 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLA---RELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTANS   70 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC---SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCC---ceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH----HHhcCC
Confidence            47999996 99999999999873222   3899999876421        00   01223333222  22    346778


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      |.|+-.++.......+..+....|..-.+.+.+.+.+.+++-.
T Consensus        71 dvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~ai  113 (142)
T d1guza1          71 DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPI  113 (142)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCE
T ss_pred             eEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeE
Confidence            8766665433333346788889999999999999988765443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.85  E-value=0.0017  Score=50.77  Aligned_cols=105  Identities=13%  Similarity=0.077  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC------C-----CCCCCceEEEccCCCHHHHHHHH
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------W-----NADHLVEYVQCDVSDPEETQAKL   92 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~------~-----~~~~~v~~~~~Dl~d~~~l~~~~   92 (397)
                      +++||.|.|| |.+|+.++..|..     ++. ++++++.++...      .     ...........     ...++++
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~-----~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCAL-----RELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAAL   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHH-----HTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHh-----CCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----Cchhhhh
Confidence            4579999996 9999999987766     343 788888765321      0     00001111111     1134567


Q ss_pred             ccCCCeeEEEEecccCC-----CcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961           93 SQLTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHV  140 (397)
Q Consensus        93 ~~~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  140 (397)
                      +++|.|+-.++....+.     .+..+....|..-.+.+++.+.+.+++-..+
T Consensus        75 ~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aivi  127 (154)
T d1pzga1          75 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII  127 (154)
T ss_dssp             TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             cCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEE
Confidence            88887666654332221     1456778899999999999998887554433

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.85  E-value=0.0005  Score=53.82  Aligned_cols=38  Identities=21%  Similarity=0.231  Sum_probs=33.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +.| ++|.|.||.|.+|+.+++.|.+     .||+|++.+|+..
T Consensus         7 ~~~-~kI~iIGg~G~mG~~la~~L~~-----~G~~V~~~d~~~~   44 (152)
T d2pv7a2           7 SDI-HKIVIVGGYGKLGGLFARYLRA-----SGYPISILDREDW   44 (152)
T ss_dssp             TTC-CCEEEETTTSHHHHHHHHHHHT-----TTCCEEEECTTCG
T ss_pred             CCC-CeEEEEcCCCHHHHHHHHHHHH-----cCCCcEecccccc
Confidence            344 6899999999999999999999     8999999998753

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.82  E-value=0.00062  Score=52.46  Aligned_cols=103  Identities=20%  Similarity=0.093  Sum_probs=68.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      +||.|.|| |.+|+.++..|+..+..   .++..+++.+...          ...........+|.       +.++++|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~---~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~ad   69 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFA---REMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSD   69 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCC---SEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCC---CEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCC
Confidence            47999996 99999999888763322   3799999764211          00112344444442       3367888


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  140 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  140 (397)
                      .|+-.++..........+....|..-.+.+.+.+.+.+++...+
T Consensus        70 ivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivi  113 (140)
T d1a5za1          70 VVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVI  113 (140)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             EEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEE
Confidence            76666553333334677888999999999999999887655433

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.76  E-value=0.0013  Score=50.75  Aligned_cols=103  Identities=15%  Similarity=0.075  Sum_probs=66.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      .||.|+|+ |++|++++..|...+..   .++.++++.+...          ........+...+  +.    +.+.++|
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~---~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daD   71 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIA---REIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDAD   71 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC---SEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCC---cEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCc
Confidence            58999996 99999999988863322   2799999865211          0001222333222  11    2367777


Q ss_pred             CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 015961           97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH  139 (397)
Q Consensus        97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  139 (397)
                      .|+-.|+....+..+..+.+..|..-.+.+.+.+.+.+++-..
T Consensus        72 vVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~  114 (143)
T d1llda1          72 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIY  114 (143)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred             EEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEE
Confidence            6666655433333467888999999999999999887654433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.71  E-value=0.001  Score=52.32  Aligned_cols=103  Identities=14%  Similarity=0.035  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      +.+||.|.|+ |.+|+.++-.|...+...   ++..+++.+...           .+.........+|.       +.+.
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~---ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~   87 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLAD---ELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTA   87 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCS---EEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCc---EEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhcc
Confidence            3469999995 999999999998732222   799999864211           01111111222332       2367


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      ++|.|+..|+....+..+..+..+.|+.-.+.+...+.+.+++-.
T Consensus        88 ~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~ai  132 (160)
T d1i0za1          88 NSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCI  132 (160)
T ss_dssp             TCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             cccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence            788777776644333346778889999999999999988765443

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.0013  Score=54.82  Aligned_cols=74  Identities=15%  Similarity=-0.014  Sum_probs=51.9

Q ss_pred             CCCCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH
Q 015961           23 RSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE   86 (397)
Q Consensus        23 ~~~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~   86 (397)
                      +..+++||||+|                ||-.|.+|++++..     .|++|+++.-......  +.++..+...  ..+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~-----~Ga~V~li~g~~~~~~--p~~~~~~~~~--t~~   73 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAAR-----RGANVTLVSGPVSLPT--PPFVKRVDVM--TAL   73 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHH-----TTCEEEEEECSCCCCC--CTTEEEEECC--SHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHH-----cCCchhhhhcccccCc--ccccccceeh--hhH
Confidence            345678888876                89999999999999     8999999987544322  2456655543  333


Q ss_pred             ----HHHHHHccCCCeeEEEEec
Q 015961           87 ----ETQAKLSQLTDVTHIFYVT  105 (397)
Q Consensus        87 ----~l~~~~~~~~~V~h~a~~~  105 (397)
                          .+...+..+|.+++.|+.+
T Consensus        74 ~m~~~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          74 EMEAAVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCC
T ss_pred             HHHHHHHhhhccceeEeeeechh
Confidence                3445567788788877653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.63  E-value=0.002  Score=49.62  Aligned_cols=101  Identities=17%  Similarity=0.106  Sum_probs=65.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEE-ccCCCHHHHHHHHcc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQ-CDVSDPEETQAKLSQ   94 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~-~Dl~d~~~l~~~~~~   94 (397)
                      +||.|+|+ |.+|+.++..|...+..   .++.++++.+...           ........+.. .|.       +.+.+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~---~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~   69 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDV---DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKG   69 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCC---SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcC---ceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhcc
Confidence            48999996 99999999988863322   2799998765321           00011122222 232       34677


Q ss_pred             CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      +|.|+-.|+....+..+..+....|..-.+.+.+.+.+.+++-.
T Consensus        70 adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~ai  113 (142)
T d1ojua1          70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESK  113 (142)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred             ccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcE
Confidence            77666655433333346788889999999999999988765543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.43  E-value=0.00056  Score=46.55  Aligned_cols=37  Identities=22%  Similarity=0.337  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      .+++|||+||+|-+|+..++.+..     .|++|++++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~-----~G~~Vi~~t~s~~   67 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHK-----LGYQVVAVSGRES   67 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESCGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHH-----cCCeEEEEECCHH
Confidence            356899999999999999998877     7999999998754

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.41  E-value=0.0012  Score=50.83  Aligned_cols=99  Identities=15%  Similarity=0.096  Sum_probs=59.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC--------C---CCCCCceEE-EccCCCHHHHHHHHc
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN--------W---NADHLVEYV-QCDVSDPEETQAKLS   93 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~--------~---~~~~~v~~~-~~Dl~d~~~l~~~~~   93 (397)
                      +||.|+|+ |.+|+.++-.|..     ++ .++.+++..+...        .   .......+. ..|.       +.+.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~-----~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~   68 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAA-----KELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTA   68 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGT
T ss_pred             CeEEEECC-CHHHHHHHHHHHh-----CCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhc
Confidence            68999995 9999999988876     33 3788888765321        0   001122232 2332       2356


Q ss_pred             cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      ++|.|+-+|+....+..+..+....|..-.+.+++.+.+.+++..
T Consensus        69 ~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~ai  113 (142)
T d1uxja1          69 NSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAV  113 (142)
T ss_dssp             TCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCE
T ss_pred             CCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCce
Confidence            677666654432222335667788999999999999998765544

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.35  E-value=0.0012  Score=51.86  Aligned_cols=101  Identities=17%  Similarity=0.071  Sum_probs=63.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      .||.|+|+ |.+|+.++..|...+..   .+++.+++++...           ............|.       +.+.++
T Consensus        20 ~KI~IIGa-G~VG~~~A~~l~~~~l~---~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~a   88 (159)
T d2ldxa1          20 CKITVVGV-GDVGMACAISILLKGLA---DELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANS   88 (159)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTSC---SEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccc
Confidence            48999995 99999999999883322   2799999764211           11111222223332       235666


Q ss_pred             CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961           96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  138 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  138 (397)
                      |.|+-.|+....+..+..+.++.|+.-.+.+.+.+.+.+++..
T Consensus        89 divvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~i  131 (159)
T d2ldxa1          89 KLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCK  131 (159)
T ss_dssp             EEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCE
T ss_pred             cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeE
Confidence            7666655433333335667788999999999888887765444

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.30  E-value=0.0014  Score=50.70  Aligned_cols=102  Identities=17%  Similarity=0.024  Sum_probs=63.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      |||.|+|+ |.+|+.++..|+....   ..+++.+++.+...           ...........+|.       +.++++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~---~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~a   70 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGV---ADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADA   70 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC---CSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCC---CceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccc
Confidence            78999995 9999999998886321   23788888764321           00112233444442       336778


Q ss_pred             CCeeEEEEecccCCC----cHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 015961           96 TDVTHIFYVTWTNRS----TEAENCKINGSMFRNVLRAVIPNAPNLRH  139 (397)
Q Consensus        96 ~~V~h~a~~~~~~~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  139 (397)
                      |.|+-.|+......+    +..+..+.|+.-.+.+.+.+.+.+++...
T Consensus        71 diVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiv  118 (146)
T d1hyha1          71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVL  118 (146)
T ss_dssp             SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             cEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEE
Confidence            877666543221111    33456788999999999999887655443

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.0016  Score=50.26  Aligned_cols=38  Identities=13%  Similarity=0.095  Sum_probs=28.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |+|.|.||||++|+.+++.|++++.. .-.+++++.++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~-p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDF-DAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGG-GGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCC-CeeEEEEeeccc
Confidence            58999999999999999988764221 123577777654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.0017  Score=51.17  Aligned_cols=35  Identities=26%  Similarity=0.352  Sum_probs=31.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      |||+|.|+ |.+|+.++..|.+     .||+|++++|++..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~-----~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCK-----QGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHH-----CCCceEEEEcCHHH
Confidence            58999996 9999999999998     89999999998653

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.02  E-value=0.0015  Score=52.42  Aligned_cols=33  Identities=21%  Similarity=0.251  Sum_probs=30.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |||.|.|| |.+|..++..|.+     .||+|++++|++
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~-----~G~~V~~~~r~~   34 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLAL-----KGQSVLAWDIDA   34 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CEEEEECc-cHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence            79999995 9999999999999     899999999974

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.93  E-value=0.018  Score=41.90  Aligned_cols=62  Identities=13%  Similarity=0.065  Sum_probs=48.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      .||.|.| .|.+|+-|+....+     -|++|++++.++...-. .-.-+++.+|+.|.+.+.+....+
T Consensus        12 ~kigIlG-gGQL~rMla~aA~~-----lG~~v~v~d~~~~~PA~-~va~~~i~~~~~d~~~l~~~~~~~   73 (111)
T d1kjqa2          12 TRVMLLG-SGELGKEVAIECQR-----LGVEVIAVDRYADAPAM-HVAHRSHVINMLDGDALRRVVELE   73 (111)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHT-----TTCEEEEEESSTTCGGG-GGSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEEe-CCHHHHHHHHHHHH-----CCCEEEEEcCCCCCchh-hcCCeEEECCCCCHHHHHHHHHhh
Confidence            5899999 69999999999998     79999999987643210 011257889999999998877543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.72  E-value=0.0027  Score=49.42  Aligned_cols=67  Identities=10%  Similarity=0.107  Sum_probs=50.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHH-HccCCCee
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAK-LSQLTDVT   99 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~   99 (397)
                      .+|+|.|. |-+|..+++.|.+     .|++|++++.++...     .....++.++.||.+|++.++.+ +..++.|+
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~-----~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQ-----RGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----cCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEE
Confidence            47999995 9999999999998     799999998876321     01125789999999999988654 34455443

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.62  E-value=0.0075  Score=48.40  Aligned_cols=33  Identities=12%  Similarity=0.343  Sum_probs=27.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   62 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~   62 (397)
                      +.||.|.||||++|..|++.|.++|    .+++..+.
T Consensus         5 kikVaIlGATGyvG~elirLL~~HP----~~ei~~l~   37 (183)
T d2cvoa1           5 EVRIAVLGASGYTGAEIVRLLANHP----QFRIKVMT   37 (183)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCS----SEEEEEEE
T ss_pred             ccEEEEECcccHHHHHHHHHHHhCC----CceEEEEe
Confidence            3589999999999999999999863    55766665

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=95.44  E-value=0.0051  Score=47.33  Aligned_cols=37  Identities=16%  Similarity=0.069  Sum_probs=26.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      +||.|.||||++|..|++.|++.+.. ...++..++.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~-p~~~i~~~ss~   37 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDF-DLIEPVFFSTS   37 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGG-GGSEEEEEESS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCC-CceEEEEeccc
Confidence            47999999999999999988753211 12356666543

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.21  E-value=0.0057  Score=48.95  Aligned_cols=32  Identities=22%  Similarity=0.324  Sum_probs=26.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   62 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~   62 (397)
                      .||.|.|||||+|..|++.|.++|    .++|..+.
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP----~~ei~~l~   33 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHP----HMTITALT   33 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCT----TEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCC----CCceEeeE
Confidence            589999999999999999999853    55765554

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.19  E-value=0.0076  Score=47.92  Aligned_cols=34  Identities=29%  Similarity=0.294  Sum_probs=27.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      .||.|.||||++|..|++.|.++|    ..+|..+..+
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP----~~ei~~l~s~   35 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHP----EAKITYLSSR   35 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCT----TEEEEEEECS
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCC----CceEEEeecc
Confidence            589999999999999999998753    4577666543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.16  E-value=0.0068  Score=47.67  Aligned_cols=33  Identities=33%  Similarity=0.404  Sum_probs=30.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +||.|.| .|.+|+.+++.|.+     .||+|++.+|++
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~-----~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRR-----RGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHH-----CCCEEEEEECCc
Confidence            4799998 69999999999998     899999999975

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.99  E-value=0.012  Score=45.33  Aligned_cols=102  Identities=14%  Similarity=0.055  Sum_probs=63.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-----CCCCCceEEEccCCCHHHHHHHHccC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-----NADHLVEYVQCDVSDPEETQAKLSQL   95 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-----~~~~~v~~~~~Dl~d~~~l~~~~~~~   95 (397)
                      .||-|.|+ |.+|+.++..|.... .   .++.++++.+...      .     .......+...+  +    .+.+.++
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~-l---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~a   72 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKN-L---GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGA   72 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-C---CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCC-C---CeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCC
Confidence            58999995 999999998776632 1   2688888865321      0     001122233222  1    1345777


Q ss_pred             CCeeEEEEecccCC-----CcHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 015961           96 TDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPNAPNLRH  139 (397)
Q Consensus        96 ~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  139 (397)
                      |.|+-.++....+.     .+..+.+..|..-.+.+.+.+.+.+++...
T Consensus        73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiv  121 (150)
T d1t2da1          73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFI  121 (150)
T ss_dssp             SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred             cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence            76666544322211     136777899999999999999988655433

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.89  E-value=0.0091  Score=46.00  Aligned_cols=34  Identities=21%  Similarity=0.336  Sum_probs=28.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      |+|.|.|+||.||...++-+.+.+   ..++|++++=
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~---d~f~v~~Lsa   35 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNP---EHFRVVALVA   35 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCT---TTEEEEEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCC---CCcEEEEEEe
Confidence            689999999999999999887643   4688888874

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.88  E-value=0.0063  Score=46.95  Aligned_cols=35  Identities=17%  Similarity=0.367  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      +|+|.|.|+||.||...++-+.+.+   ..++|.+++=
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~---d~f~v~~lsa   36 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNL---DRYQVIALTA   36 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTG---GGEEEEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCC---CCcEEEEEEe
Confidence            3799999999999999999987643   4678888874

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.83  E-value=0.014  Score=42.83  Aligned_cols=36  Identities=17%  Similarity=0.120  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .++++|+|.| .|++|..++..|.+     .|.+|+++.|.+
T Consensus        20 ~~p~~v~IiG-gG~ig~E~A~~l~~-----~G~~Vtlve~~~   55 (117)
T d1ebda2          20 EVPKSLVVIG-GGYIGIELGTAYAN-----FGTKVTILEGAG   55 (117)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSS
T ss_pred             hcCCeEEEEC-CCccceeeeeeecc-----cccEEEEEEecc
Confidence            3458999999 59999999999998     899999999875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.53  E-value=0.017  Score=42.81  Aligned_cols=35  Identities=26%  Similarity=0.297  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++++|.| .|+||..++..|.+     .|.+|+.+.|.+
T Consensus        22 ~p~~~vIiG-~G~ig~E~A~~l~~-----lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIG-GGIIGLEMGSVYSR-----LGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCchHHHHHHHHHh-----hCcceeEEEecc
Confidence            458999999 69999999999998     899999999865

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.42  E-value=0.024  Score=43.34  Aligned_cols=36  Identities=28%  Similarity=0.297  Sum_probs=26.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ++|.|.||||++|..|++.|.+...  ...++..+..+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~h--P~~~l~~~~s~   38 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDF--PLHRLHLLASA   38 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTC--CCSCEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC--CceEEEEEeec
Confidence            6899999999999999999963111  23467766543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.41  E-value=0.019  Score=42.94  Aligned_cols=30  Identities=17%  Similarity=0.189  Sum_probs=25.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV   61 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l   61 (397)
                      +||.|.|++|-.|+.+.+.+.+     +++++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~-----~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSE-----KGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhc-----CCCeEEEE
Confidence            4799999999999999988877     78886544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.41  E-value=0.021  Score=45.12  Aligned_cols=39  Identities=23%  Similarity=0.240  Sum_probs=33.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|||+||+|-+|...++.+..     .|.+|+++++++.
T Consensus        26 ~~~g~~VlV~Ga~G~vG~~aiq~a~~-----~G~~vi~~~~~~~   64 (174)
T d1yb5a2          26 VKAGESVLVHGASGGVGLAACQIARA-----YGLKILGTAGTEE   64 (174)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCEEEEEeccccccccccccccc-----cCccccccccccc
Confidence            44668999999999999999998877     7999999998653

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.31  E-value=0.021  Score=45.50  Aligned_cols=58  Identities=19%  Similarity=0.199  Sum_probs=43.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   98 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V   98 (397)
                      ...+++|.|.| .|-||+.+++.|..     -|.+|++.+|.+.....     .       -.+++++.+..+|.|
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~-----~g~~v~~~d~~~~~~~~-----~-------~~~~l~ell~~sDiv   96 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAA-----LGAQVRGFSRTPKEGPW-----R-------FTNSLEEALREARAA   96 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHH-----TTCEEEEECSSCCCSSS-----C-------CBSCSHHHHTTCSEE
T ss_pred             cccCceEEEec-cccccccceeeeec-----cccccccccccccccce-----e-------eeechhhhhhccchh
Confidence            35678999999 79999999999987     79999999987543210     0       012356788888863

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.24  E-value=0.024  Score=41.77  Aligned_cols=35  Identities=14%  Similarity=0.151  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++++|.| .|+||-.++..|.+     .|.+|+.+.|..
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~-----~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWAR-----LGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHH-----cCCceEEEEeec
Confidence            458999999 69999999999998     899999999874

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.10  E-value=0.0063  Score=49.43  Aligned_cols=36  Identities=25%  Similarity=0.170  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..+++|.|.| .|.||+.+++.|..     -|.+|++.++..
T Consensus        41 l~gk~vgIiG-~G~IG~~va~~l~~-----fg~~V~~~d~~~   76 (197)
T d1j4aa1          41 VRDQVVGVVG-TGHIGQVFMQIMEG-----FGAKVITYDIFR   76 (197)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSC
T ss_pred             ccCCeEEEec-ccccchhHHHhHhh-----hcccccccCccc
Confidence            4568999999 89999999999987     799999998754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.05  E-value=0.023  Score=41.98  Aligned_cols=34  Identities=38%  Similarity=0.431  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .++|+|.| .|++|..++..|.+     .|.+|+.+.|.+
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~-----~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATART-----AGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhc-----ccceEEEEeecc
Confidence            47999999 69999999999998     899999999875

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.04  E-value=0.025  Score=41.37  Aligned_cols=35  Identities=17%  Similarity=0.097  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++|+|.| .|++|..++..|.+     .|.+|+.+.|.+
T Consensus        20 ~p~~vvIiG-gG~ig~E~A~~l~~-----~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVG-AGYIGVELGGVING-----LGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCCEEEEEC-CChhhHHHHHHhhc-----cccEEEEEeecc
Confidence            347999999 69999999999998     799999999875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.03  E-value=0.019  Score=41.97  Aligned_cols=37  Identities=22%  Similarity=0.203  Sum_probs=32.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +.++++++|.| .|++|-.++..|.+     .|++|+++.|.+
T Consensus        18 ~~~p~~vvIiG-gG~~G~E~A~~l~~-----~g~~Vtlve~~~   54 (115)
T d1lvla2          18 KALPQHLVVVG-GGYIGLELGIAYRK-----LGAQVSVVEARE   54 (115)
T ss_dssp             SSCCSEEEEEC-CSHHHHHHHHHHHH-----HTCEEEEECSSS
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHhh-----cccceEEEeeec
Confidence            34568999999 69999999999998     799999998864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.03  E-value=0.029  Score=41.17  Aligned_cols=34  Identities=24%  Similarity=0.236  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +++|+|.| .|++|-.++..|.+     .|.+|+.+.|.+
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~-----~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKR-----LGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHh-----ccccceeeehhc
Confidence            47999999 59999999999998     799999999874

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.97  E-value=0.021  Score=44.17  Aligned_cols=22  Identities=32%  Similarity=0.563  Sum_probs=20.4

Q ss_pred             EEEEEcCCChhHHHHHHHccCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLP   49 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~   49 (397)
                      ||.|.||||++|..|++.|.++
T Consensus         3 kVaIvGATGyvG~eLirlL~~H   24 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEES   24 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTC
T ss_pred             EEEEECCCcHHHHHHHHHHHcC
Confidence            7999999999999999999874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=93.84  E-value=0.014  Score=45.92  Aligned_cols=37  Identities=22%  Similarity=0.316  Sum_probs=31.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      +.+|||+||+|-+|...++....     .|.+|+++++++.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~-----~Ga~Viat~~s~~k   60 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNK-----RGYDVVASTGNREA   60 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHH-----HTCCEEEEESSSST
T ss_pred             CCEEEEeCCcchHHHHHHHHHHH-----cCCceEEEecCHHH
Confidence            34699999999999999988776     79999999997654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=93.80  E-value=0.023  Score=45.22  Aligned_cols=39  Identities=26%  Similarity=0.316  Sum_probs=34.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      .+.+++|||+||+|-+|...++....     .|.+|++++|++.
T Consensus        27 v~~G~~VlV~ga~ggvG~~aiqlak~-----~Ga~vi~~~~~~~   65 (182)
T d1v3va2          27 VKGGETVLVSAAAGAVGSVVGQIAKL-----KGCKVVGAAGSDE   65 (182)
T ss_dssp             CCSSCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCEEEEEeCCCchhHHHHHHHHc-----cCCEEEEeCCCHH
Confidence            45678999999999999999988887     7999999998754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.73  E-value=0.033  Score=41.19  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..++|+|.| .||+|..++..|.+     .|.+|+.+.|.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~-----~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAK-----AGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhc-----cceEEEEEEecC
Confidence            357999999 69999999999998     899999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.71  E-value=0.024  Score=41.93  Aligned_cols=34  Identities=24%  Similarity=0.161  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ++++++|.| .|+||..++..|.+     -|.+|+++.|+
T Consensus        19 ~P~~vvIIG-gG~iG~E~A~~l~~-----lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVG-ASYVALECAGFLAG-----IGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEESS
T ss_pred             CCCeEEEEC-CCccHHHHHHHHhh-----cCCeEEEEEec
Confidence            447899999 59999999999998     79999999875

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.66  E-value=0.015  Score=43.53  Aligned_cols=62  Identities=11%  Similarity=0.005  Sum_probs=44.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLT   96 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~   96 (397)
                      |+|+|.| -|-+|..+++.|..       ++|++++.++... .....++.++.||.++++.|..+ +..++
T Consensus         1 kHivI~G-~g~~g~~l~~~L~~-------~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~   64 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELRG-------SEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGAR   64 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSCG-------GGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHcC-------CCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCc
Confidence            5789999 59999999999854       3577777765421 11235789999999999887663 33344

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.63  E-value=0.016  Score=46.11  Aligned_cols=40  Identities=20%  Similarity=0.270  Sum_probs=34.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      ...+.+|||+||+|-+|+..++.+..     .|.+|++.++++.+
T Consensus        29 ~~~g~~VLI~gaaGGVG~~aiQlak~-----~Ga~Viat~~s~~k   68 (176)
T d1xa0a2          29 TPERGPVLVTGATGGVGSLAVSMLAK-----RGYTVEASTGKAAE   68 (176)
T ss_dssp             CGGGCCEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESCTTC
T ss_pred             CCCCCEEEEEeccchHHHHHHHHHHH-----cCCceEEecCchHH
Confidence            33457899999999999999998877     79999999987654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.61  E-value=0.026  Score=44.35  Aligned_cols=33  Identities=39%  Similarity=0.671  Sum_probs=28.4

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~   65 (397)
                      |+|+|.| .|.+|+.+++.|.+     .|+  +|++.+|++
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~-----~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRR-----SGFKGKIYGYDINP   36 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHH-----TTCCSEEEEECSCH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHh-----cCCCeEEEEEECCh
Confidence            5799998 69999999999987     564  799999875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=93.60  E-value=0.019  Score=45.28  Aligned_cols=40  Identities=18%  Similarity=0.274  Sum_probs=34.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      .+.+++|||+||+|-+|...++.+..     .|.+|+++++++.+
T Consensus        25 ~~~g~~VlI~ga~G~vG~~aiqlak~-----~G~~vi~~~~~~~~   64 (171)
T d1iz0a2          25 ARPGEKVLVQAAAGALGTAAVQVARA-----MGLRVLAAASRPEK   64 (171)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSGGG
T ss_pred             CCCCCEEEEEeccccchhhhhhhhcc-----cccccccccccccc
Confidence            44568999999999999999998877     79999999987543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.42  E-value=0.028  Score=45.09  Aligned_cols=58  Identities=17%  Similarity=0.049  Sum_probs=41.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ..+++|.|.| .|.||+.+++.|..     -|.+|++.++.......   ..  ...     +++++.++.+|.
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~-----fg~~v~~~d~~~~~~~~---~~--~~~-----~~l~ell~~sDi   99 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAES-----LGMYVYFYDIENKLPLG---NA--TQV-----QHLSDLLNMSDV   99 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCCCCT---TC--EEC-----SCHHHHHHHCSE
T ss_pred             ccceEEEEee-cccchhhhhhhccc-----ccceEeeccccccchhh---hh--hhh-----hhHHHHHhhccc
Confidence            4568999998 89999999999987     79999999986443211   11  111     245677787875

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.37  E-value=0.026  Score=45.85  Aligned_cols=33  Identities=30%  Similarity=0.288  Sum_probs=29.7

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |||.|.| .||+|..++..|.+     .||+|++++.++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~-----~g~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSA-----RGHEVIGVDVSS   33 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHh-----CCCcEEEEeCCH
Confidence            4799998 89999999999998     899999999753

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=93.31  E-value=0.032  Score=38.97  Aligned_cols=53  Identities=17%  Similarity=0.120  Sum_probs=38.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--CCCCceEEEccC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDV   82 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl   82 (397)
                      ..+|+|+|.|. |-.|..+++.|.+     .|++|++.+.+......  ....+.+..+..
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~-----~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~   57 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLA-----RGVTPRVMDTRMTPPGLDKLPEAVERHTGSL   57 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHH-----TTCCCEEEESSSSCTTGGGSCTTSCEEESBC
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHH-----CCCEEEEeeCCcCchhHHHHhhccceeeccc
Confidence            45689999995 8899999999999     89999999986543211  123445555543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.29  E-value=0.033  Score=44.36  Aligned_cols=72  Identities=13%  Similarity=0.066  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC---------CCCCCceEEEccCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ..+++|||.| +|-.|+.++..|.+     .|. +|++++|.+....         ...-.......|+.+.+.+...+.
T Consensus        16 l~~k~vlIlG-aGGaarai~~al~~-----~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (182)
T d1vi2a1          16 IKGKTMVLLG-AGGASTAIGAQGAI-----EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA   89 (182)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHH-----TTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHhh-----cCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc
Confidence            3558999999 58999999999988     454 6999999754310         000123355678888888888888


Q ss_pred             cCCCeeEE
Q 015961           94 QLTDVTHI  101 (397)
Q Consensus        94 ~~~~V~h~  101 (397)
                      .+|.|+++
T Consensus        90 ~~diiIN~   97 (182)
T d1vi2a1          90 SADILTNG   97 (182)
T ss_dssp             TCSEEEEC
T ss_pred             ccceeccc
Confidence            88877776

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.28  E-value=0.035  Score=40.35  Aligned_cols=54  Identities=22%  Similarity=0.268  Sum_probs=40.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSD   84 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d   84 (397)
                      .+|+|||.| .|-+|..-++.|++     .|.+|+.++......   +....+++++..+..+
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~-----~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLE-----AGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE   67 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHH-----TTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEeccCChHHHHHHhcCCceeeccCCCH
Confidence            468999999 69999999999999     799999998755332   1123567777766644

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.17  E-value=0.045  Score=40.55  Aligned_cols=34  Identities=26%  Similarity=0.274  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +|+++|.| .|++|-.++..|.+     .|.+|+.+.|.+
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~-----~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSA-----LGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhc-----CCcEEEEEeecc
Confidence            47999999 59999999999998     799999999974

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=93.15  E-value=0.0036  Score=49.13  Aligned_cols=67  Identities=21%  Similarity=0.119  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH  100 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h  100 (397)
                      ..+++|||.|+ |-+|..+++.|..     .|. +|++..|...+.  +...-+.+.     .+.+++.+.+..+|.|+.
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~-----~g~~~i~v~nRt~~ka~~l~~~~~~~~-----~~~~~~~~~l~~~Divi~   90 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVD-----RGVRAVLVANRTYERAVELARDLGGEA-----VRFDELVDHLARSDVVVS   90 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHH-----HCCSEEEEECSSHHHHHHHHHHHTCEE-----CCGGGHHHHHHTCSEEEE
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHh-----cCCcEEEEEcCcHHHHHHHHHhhhccc-----ccchhHHHHhccCCEEEE
Confidence            35579999996 9999999999998     676 588888874332  100001122     233567778888997766


Q ss_pred             E
Q 015961          101 I  101 (397)
Q Consensus       101 ~  101 (397)
                      +
T Consensus        91 a   91 (159)
T d1gpja2          91 A   91 (159)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.11  E-value=0.033  Score=43.44  Aligned_cols=34  Identities=15%  Similarity=0.140  Sum_probs=30.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|.|.| .|.+|+.+++.|++     .||+|++.+|++.
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~-----~g~~v~~~d~~~~   35 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLK-----AGYLLNVFDLVQS   35 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEECSSHH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHH-----CCCeEEEEECchh
Confidence            5799998 89999999999999     8999999999753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.10  E-value=0.029  Score=45.03  Aligned_cols=33  Identities=24%  Similarity=0.288  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +||.|.| +|-.|++++..|.+     .||+|++..|++
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~-----~g~~V~l~~r~~   40 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSK-----KCREVCVWHMNE   40 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHT-----TEEEEEEECSCH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHH-----cCCeEEEEEecH
Confidence            5799999 69999999999998     799999999874

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.01  E-value=0.077  Score=41.96  Aligned_cols=38  Identities=16%  Similarity=0.079  Sum_probs=33.6

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +...+|+|+|.| +|..|-..+..|.+     +||+|+++.+.+
T Consensus        39 ~~~~~k~V~IIG-aGPAGL~AA~~la~-----~G~~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVG-AGPAGLAFAINAAA-----RGHQVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEEESSS
T ss_pred             CCCCCcEEEEEC-ccHHHHHHHHHHHh-----hccceEEEeccC
Confidence            445678999999 69999999999998     899999999875

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.95  E-value=0.045  Score=41.08  Aligned_cols=36  Identities=14%  Similarity=0.191  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ..++|+|.| +|++|..++..|.+     .|.+|+.+.+.+.
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~-----~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIK-----ANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHh-----hCcceeeeeeccc
Confidence            358999999 69999999999998     7999999998753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=92.90  E-value=0.02  Score=45.54  Aligned_cols=36  Identities=22%  Similarity=0.354  Sum_probs=32.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      .+|||+||+|-+|+..++....     .|.+|++++|++.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~-----~Ga~Via~~~~~~k   68 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHK-----LGYQVVAVSGREST   68 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESCGGG
T ss_pred             CcEEEEEccccchHHHHHHHHH-----cCCCeEEEecchhH
Confidence            4899999999999999988887     79999999997654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.89  E-value=0.044  Score=45.62  Aligned_cols=35  Identities=31%  Similarity=0.387  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..++|+|.| .|..|...+.+|.+     +|++|+++.|..
T Consensus         5 ~~~kVvVIG-aGiaGl~~A~~L~~-----~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLG-SGVIGLSSALILAR-----KGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHH-----CCCCEEEEeCCC
Confidence            347899999 59999999999998     899999999864

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.84  E-value=0.014  Score=46.52  Aligned_cols=68  Identities=18%  Similarity=0.089  Sum_probs=43.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      |+|.|.| +|-.|+.|+..|.+     .|++|+...|.....         ....-.......++.-.+++.++++++|.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~-----~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~   74 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVD-----NGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV   74 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHH-----HCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccch
Confidence            5899999 69999999999998     799999998853210         00001111111222334567788888885


Q ss_pred             eeE
Q 015961           98 VTH  100 (397)
Q Consensus        98 V~h  100 (397)
                      |+.
T Consensus        75 Ii~   77 (180)
T d1txga2          75 VLL   77 (180)
T ss_dssp             EEE
T ss_pred             hhc
Confidence            444

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.82  E-value=0.025  Score=42.65  Aligned_cols=31  Identities=13%  Similarity=0.227  Sum_probs=25.4

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   62 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~   62 (397)
                      ||.|.|++|-.|+.+++.+.+.    .++++.+..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~----~~~~l~~~~   31 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAA----DDLTLSAEL   31 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHS----TTSEEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhC----CCCEEEEEE
Confidence            6999999999999999998764    577865544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.046  Score=43.91  Aligned_cols=36  Identities=17%  Similarity=0.267  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      |=|+|.|.|| |.+|+.++..++.     .||+|+++++++.
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~-----~G~~V~l~D~~~~   38 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAA-----TGHTVVLVDQTED   38 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHh-----CCCcEEEEECChH
Confidence            4479999995 9999999999998     8999999999753

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.59  E-value=0.043  Score=40.44  Aligned_cols=34  Identities=29%  Similarity=0.414  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .++|+|.| .|++|-.++..|.+     .|++|+.+.|.+
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~-----~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAE-----AGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhc-----ccceEEEEeccc
Confidence            37899999 59999999999998     899999998864

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.40  E-value=0.037  Score=43.86  Aligned_cols=39  Identities=26%  Similarity=0.183  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|||+||+|-+|..+++.+..     .|.+|+++++++.
T Consensus        23 ~~~g~~VlI~ga~g~vG~~~iqla~~-----~g~~vi~~~~~~~   61 (183)
T d1pqwa_          23 LSPGERVLIHSATGGVGMAAVSIAKM-----IGARIYTTAGSDA   61 (183)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHH-----HTCEEEEEESSHH
T ss_pred             CCCCCEEEEECCCCCcccccchhhcc-----ccccceeeecccc
Confidence            44567999999999999999998877     7899999998653

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.40  E-value=0.015  Score=45.56  Aligned_cols=35  Identities=17%  Similarity=0.150  Sum_probs=27.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARR   64 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~   64 (397)
                      ..||.|.|++|-+|+.+++.+.++    ++.++++. +|.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~----~~~~lv~~~~~~   39 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALAL----EGVQLGAALERE   39 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHS----TTEECCCEECCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEecc
Confidence            358999999999999999999874    67885554 454

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=92.32  E-value=0.04  Score=43.52  Aligned_cols=39  Identities=15%  Similarity=0.016  Sum_probs=33.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|||+||+|-+|..+++.+..     .|.+|+++++++.
T Consensus        26 l~~g~~Vlv~ga~g~vG~~~iqlak~-----~Ga~Vi~~~~s~~   64 (179)
T d1qora2          26 IKPDEQFLFHAAAGGVGLIACQWAKA-----LGAKLIGTVGTAQ   64 (179)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHH-----HTCEEEEEESSHH
T ss_pred             CCCCCEEEEEccccccchHHHHHHHH-----hCCeEeecccchH
Confidence            34568999999999999999998877     7999999998764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.27  E-value=0.047  Score=42.37  Aligned_cols=34  Identities=21%  Similarity=0.363  Sum_probs=30.8

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +||-|.| .|.+|+.+++.|++     .||+|++.+|++.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~-----~G~~V~~~d~~~~   34 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLK-----AGYSLVVSDRNPE   34 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHH-----CCCeEEEEeCCcc
Confidence            4799999 79999999999998     8999999999764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.26  E-value=0.037  Score=40.91  Aligned_cols=37  Identities=14%  Similarity=0.162  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ..+++++|.| .|+||-.++..|.+     .|.+|+.+.|.+.
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~-----~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGR-----IGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHH-----HTCEEEEECSSSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHh-----cCCeEEEEEEccc
Confidence            3458999999 69999999999998     7999999999753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.23  E-value=0.075  Score=40.76  Aligned_cols=34  Identities=15%  Similarity=0.159  Sum_probs=30.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +||.|.| +|.+|+++++.|++     .|++|++.+|++.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~-----~~~~i~v~~r~~~   34 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQ-----TPHELIISGSSLE   34 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT-----SSCEEEEECSSHH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHh-----CCCeEEEEcChHH
Confidence            4799998 89999999999998     7999999998753

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.12  E-value=0.051  Score=43.92  Aligned_cols=58  Identities=17%  Similarity=0.086  Sum_probs=42.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   97 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~   97 (397)
                      ..+++|.|.| .|-||+.+++.|..     -|.+|++.++.......  ..+.+        .++.+.++.+|.
T Consensus        43 l~~ktvgIiG-~G~IG~~va~~l~~-----fg~~v~~~d~~~~~~~~--~~~~~--------~~l~~l~~~~D~  100 (199)
T d1dxya1          43 LGQQTVGVMG-TGHIGQVAIKLFKG-----FGAKVIAYDPYPMKGDH--PDFDY--------VSLEDLFKQSDV  100 (199)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCSSCC--TTCEE--------CCHHHHHHHCSE
T ss_pred             ccceeeeeee-cccccccccccccc-----cceeeeccCCccchhhh--cchhH--------HHHHHHHHhccc
Confidence            3468999999 89999999999987     79999999986543211  22221        235667788886

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.86  E-value=0.057  Score=41.44  Aligned_cols=34  Identities=21%  Similarity=0.090  Sum_probs=29.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +||-|.| .|.+|+.+++.|++     +||+|+..+|.+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~-----~g~~v~~~~~~~~   34 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRS-----RGVEVVTSLEGRS   34 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHH-----TTCEEEECCTTCC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHH-----CCCeEEEEcCchh
Confidence            4799998 79999999999999     8999998887654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.73  E-value=0.063  Score=39.73  Aligned_cols=35  Identities=20%  Similarity=0.231  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++++|.| .|+||-.++..|.+     .|.+|+.+.|.+
T Consensus        25 ~p~~vvIiG-gG~IG~E~A~~~~~-----~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIG-GGIIGLEMGTVYST-----LGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEES-CSHHHHHHHHHHHH-----HTCEEEEECSSS
T ss_pred             cCCeEEEEC-CCHHHHHHHHHhhc-----CCCEEEEEEeec
Confidence            348999999 69999999999998     799999999874

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.45  E-value=0.098  Score=38.17  Aligned_cols=35  Identities=11%  Similarity=0.068  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++|+|.| +|++|..++..|.+     .|.+|+.+.|.+
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~-----~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNA-----TGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHh-----cchhheEeeccc
Confidence            358999999 69999999999998     788999999875

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.07  E-value=0.05  Score=42.96  Aligned_cols=34  Identities=26%  Similarity=0.258  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +||-|.| .|.+|+.+++.|++     .||+|++.+|.+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~-----~G~~V~~~dr~~~   35 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAE-----KGFKVAVFNRTYS   35 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHH-----CCCeEEEEECCHH
Confidence            3699999 89999999999999     8999999999753

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.00  E-value=0.097  Score=40.77  Aligned_cols=39  Identities=21%  Similarity=0.147  Sum_probs=31.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~   67 (397)
                      ...+.+|+|+|+ |-+|...+..+..     .|.+|+++++++.+
T Consensus        25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~-----~G~~vi~~~~~~~k   63 (168)
T d1piwa2          25 CGPGKKVGIVGL-GGIGSMGTLISKA-----MGAETYVISRSSRK   63 (168)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHH-----HTCEEEEEESSSTT
T ss_pred             cCCCCEEEEECC-CCcchhHHHHhhh-----ccccccccccchhH
Confidence            345679999996 9999998887776     78999999987543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.91  E-value=0.095  Score=43.67  Aligned_cols=36  Identities=25%  Similarity=0.203  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      +.+||+|.| .|..|..++..|.+     .|++|+++.|++.
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~-----~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRD-----AGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHH-----CCCCEEEEeCCCC
Confidence            447899999 59999999999998     8999999998653

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.84  E-value=0.12  Score=44.89  Aligned_cols=34  Identities=26%  Similarity=0.341  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .|+|+|.| +|+-|...+..|.+     .|++|+++.+++
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k-----~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAE-----KGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHh-----CCCCEEEEECCC
Confidence            47899999 69999999999998     899999999864

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=90.32  E-value=0.071  Score=41.98  Aligned_cols=34  Identities=15%  Similarity=0.210  Sum_probs=31.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      .+|-|.| .|.+|+.+++.|++     .||+|++.+|++.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~-----~G~~V~v~dr~~~   36 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMND-----HGFVVCAFNRTVS   36 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSTH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHH-----CCCeEEEEcCCHH
Confidence            5799999 79999999999999     8999999999864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.29  E-value=0.077  Score=45.79  Aligned_cols=40  Identities=28%  Similarity=0.242  Sum_probs=34.1

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .++...+|+|+|.| +|..|-..+.+|.+     .|++|+++.+.+
T Consensus        24 ~~~~~~pkkV~IIG-aG~aGLsaA~~L~~-----~G~~V~vlE~~~   63 (370)
T d2iida1          24 LKATSNPKHVVIVG-AGMAGLSAAYVLAG-----AGHQVTVLEASE   63 (370)
T ss_dssp             SCCCSSCCEEEEEC-CBHHHHHHHHHHHH-----HTCEEEEECSSS
T ss_pred             CCCCCCCCeEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEeCCC
Confidence            33455668999999 69999999999998     899999999764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.08  E-value=0.082  Score=41.96  Aligned_cols=34  Identities=15%  Similarity=0.161  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~   65 (397)
                      +|||+|.| +|..|-..+..|.+     .|++ |+++.|++
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~-----~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLAR-----LGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHH-----TTCCCEEEEESSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHH-----CCCCeEEEEEecC
Confidence            47999999 59999999999998     7984 99999864

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=89.99  E-value=0.061  Score=42.88  Aligned_cols=33  Identities=18%  Similarity=0.163  Sum_probs=29.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ++|.|.|| |.+|+.++..++.     .|++|+++++++
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~-----~G~~V~l~D~~~   37 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSAS-----KGTPILMKDINE   37 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHH-----TTCCEEEECSSH
T ss_pred             CEEEEECc-CHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence            57999995 9999999999998     899999999975

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=89.66  E-value=0.096  Score=40.06  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=29.1

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ++|.+.| +|.+|+++++.|++.    .+++|++.+|++.
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~----~~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQ----GGYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHH----CSCEEEEECSSHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHC----CCCcEEEEeCChh
Confidence            4799999 599999999999872    3489999999764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.63  E-value=0.11  Score=43.74  Aligned_cols=31  Identities=23%  Similarity=0.326  Sum_probs=28.7

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |+|.| .|.+|..++.+|.+     +|++|+++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~-----~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAK-----ENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHH-----CCCcEEEEeCCC
Confidence            99999 69999999999999     899999999864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.49  E-value=0.041  Score=43.86  Aligned_cols=64  Identities=17%  Similarity=0.131  Sum_probs=43.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  101 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~  101 (397)
                      ..++++.|.| .|.||+.+++.|..     -|.+|++.++...........++.        .+++++++.+|. ++|+
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~-----fg~~v~~~d~~~~~~~~~~~~~~~--------~~l~ell~~sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAA-----FGAYVVAYDPYVSPARAAQLGIEL--------LSLDDLLARADFISVHL  106 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECTTSCHHHHHHHTCEE--------CCHHHHHHHCSEEEECC
T ss_pred             ccceeeeecc-ccchhHHHHHHhhh-----ccceEEeecCCCChhHHhhcCcee--------ccHHHHHhhCCEEEEcC
Confidence            4568899999 79999999999987     789999999864321100011111        235677888886 4444

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=89.13  E-value=0.17  Score=42.76  Aligned_cols=34  Identities=18%  Similarity=0.196  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .|||+|.| +|.-|-..+.+|.+     .|++|+++.+++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~-----~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKI-----HGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-----TSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHh-----CCCCEEEEeCCC
Confidence            47999999 69999999999998     899999998764

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=89.07  E-value=0.22  Score=36.67  Aligned_cols=48  Identities=17%  Similarity=0.067  Sum_probs=33.2

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-CCCCCCCceEEE
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-NWNADHLVEYVQ   79 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~~~~~~~v~~~~   79 (397)
                      .+|+|.| +|.+|..|+++|...    .+|+|+++..+... ....-.++.++.
T Consensus         4 ~~v~I~G-aG~~G~~l~~~l~~~----~~~~iv~fiDdd~~k~G~~I~Gi~V~~   52 (126)
T d2dt5a2           4 WGLCIVG-MGRLGSALADYPGFG----ESFELRGFFDVDPEKVGRPVRGGVIEH   52 (126)
T ss_dssp             EEEEEEC-CSHHHHHHHHCSCCC----SSEEEEEEEESCTTTTTCEETTEEEEE
T ss_pred             ceEEEEc-CCHHHHHHHHhHhhc----CCcEEEEEEeCchHhcCCEECCEEEec
Confidence            3899999 699999999988653    68998888764332 211124566653

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.98  E-value=0.19  Score=41.31  Aligned_cols=36  Identities=25%  Similarity=0.287  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..+++|+|.| +|+.|-..+..|.+     .|++|+++.+.+
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~-----~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLME-----SGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHH-----hccceeeEeecc
Confidence            4568999999 69999999999998     899999998764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.79  E-value=0.19  Score=39.99  Aligned_cols=32  Identities=31%  Similarity=0.259  Sum_probs=26.9

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |||.|.| .||+|..++..| +     .|++|++++-++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a-----~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-S-----LQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-T-----TTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-H-----CCCcEEEEECCH
Confidence            4799998 899999998655 5     699999999764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.66  E-value=0.17  Score=38.52  Aligned_cols=33  Identities=24%  Similarity=0.117  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      .+|+|||+|| |.+|..-++.|++     .|.+|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~-----~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMP-----TGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGG-----GTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeC
Confidence            4689999996 9999999999999     7999999964

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=88.63  E-value=0.18  Score=39.69  Aligned_cols=38  Identities=21%  Similarity=0.077  Sum_probs=31.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~   66 (397)
                      ...+.+|||+|| |-+|...+..+..     .|. +|+++++++.
T Consensus        26 ~~~G~~VlV~Ga-G~iG~~~~~~ak~-----~Ga~~Vi~~~~~~~   64 (182)
T d1vj0a2          26 SFAGKTVVIQGA-GPLGLFGVVIARS-----LGAENVIVIAGSPN   64 (182)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHH-----TTBSEEEEEESCHH
T ss_pred             CCCCCEEEEECC-Cccchhheecccc-----cccccccccccccc
Confidence            345689999996 9999999888877     787 7999998754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.56  E-value=0.39  Score=34.57  Aligned_cols=35  Identities=23%  Similarity=0.138  Sum_probs=27.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHc---cCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEIL---PLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L---~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+++++|.|| |++|-.++..|   ..     ++.+|+.+.|.+
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~-----~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKP-----KDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCC-----TTCEEEEEESSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhccc-----CCcEEEEEeccc
Confidence            3479999995 99999999554   44     577899999864

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.53  E-value=0.14  Score=39.73  Aligned_cols=36  Identities=22%  Similarity=0.301  Sum_probs=28.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +|||+|.| .|++|-.++..|.+..   ...+|+++.+.+
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~---~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLAD---PSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHC---TTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcC---CCCcEEEEECCC
Confidence            58999999 5999999999998721   124789887754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=87.79  E-value=0.31  Score=38.78  Aligned_cols=38  Identities=21%  Similarity=0.078  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++|.|.| .|-||+.+++.|..     -|.+|++.++...
T Consensus        46 eL~gktvgIiG-~G~IG~~va~~l~~-----fg~~v~~~d~~~~   83 (193)
T d1mx3a1          46 RIRGETLGIIG-LGRVGQAVALRAKA-----FGFNVLFYDPYLS   83 (193)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECTTSC
T ss_pred             eeeCceEEEec-cccccccceeeeec-----cccceeeccCccc
Confidence            34678999999 89999999999988     7999999998644

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.69  E-value=0.27  Score=37.86  Aligned_cols=38  Identities=13%  Similarity=0.065  Sum_probs=30.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+.+|+|.|+ |-+|...+..+..     .|.+|+++++++.
T Consensus        25 ~~~g~~VlV~Ga-G~vG~~~~~~ak~-----~G~~Vi~~~~~~~   62 (166)
T d1llua2          25 ARPGQWVAISGI-GGLGHVAVQYARA-----MGLHVAAIDIDDA   62 (166)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHH
T ss_pred             CCCCCEEEEeec-cccHHHHHHHHHH-----cCCccceecchhh
Confidence            345679999985 9999998887776     7899999998753

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.48  E-value=0.5  Score=33.90  Aligned_cols=37  Identities=24%  Similarity=0.150  Sum_probs=27.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      +++++|.| .|++|-.++..|.+...  .|.+|+.+.|.+
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~--~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKA--RGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSC--TTCEEEEEESSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcc--cccccceecccc
Confidence            48999999 59999999975432100  588999999864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.31  E-value=0.29  Score=37.24  Aligned_cols=57  Identities=21%  Similarity=0.081  Sum_probs=38.7

Q ss_pred             CCEEEEE-cCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961           26 QSVALIV-GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLT   96 (397)
Q Consensus        26 ~~~ILVt-GatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~   96 (397)
                      ++.++|. .+.||+|..++..|.+     .|++|+.+.+.+.-.    +     ..|-.....+...+....
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~-----~G~~Vtlv~~~~~~~----~-----~~~~~~~~~~~~~l~~~G   96 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLAT-----AGHEVTIVSGVHLAN----Y-----MHFTLEYPNMMRRLHELH   96 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHH-----TTCEEEEEESSCTTT----H-----HHHTTCHHHHHHHHHHTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHH-----cCCeEEEEecCCccc----c-----ccchhHHHHHHHHHhhcc
Confidence            4566765 2469999999999999     899999999864221    0     224444555556565543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.06  E-value=0.33  Score=34.39  Aligned_cols=41  Identities=20%  Similarity=0.052  Sum_probs=31.5

Q ss_pred             CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      .+.+..+|+|+|.| +|..|..++..|.+     ..-+|+.+.|++.
T Consensus        26 ~~~~f~gK~VlVVG-~g~Sa~dia~~l~~-----~ak~v~~~~~r~~   66 (107)
T d2gv8a2          26 EPELFVGESVLVVG-GASSANDLVRHLTP-----VAKHPIYQSLLGG   66 (107)
T ss_dssp             CGGGGTTCCEEEEC-SSHHHHHHHHHHTT-----TSCSSEEEECTTC
T ss_pred             chhhcCCCeEEEEC-CCCCHHHHHHHHHH-----hcCEEEEEEecCc
Confidence            44556789999999 79999999999987     4445666666543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=86.93  E-value=0.25  Score=38.20  Aligned_cols=38  Identities=13%  Similarity=0.052  Sum_probs=31.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+.+|+|.|+ |-+|...+..+..     .|.+++++++++.
T Consensus        28 ~~~G~~VlI~Ga-G~vG~~a~qlak~-----~Ga~~i~~~~~~~   65 (168)
T d1uufa2          28 AGPGKKVGVVGI-GGLGHMGIKLAHA-----MGAHVVAFTTSEA   65 (168)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESSGG
T ss_pred             CCCCCEEEEecc-chHHHHHHHHhhc-----ccccchhhccchh
Confidence            445689999995 8899999988877     7999888888654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=86.93  E-value=0.31  Score=37.60  Aligned_cols=38  Identities=21%  Similarity=0.197  Sum_probs=31.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+.+|+|+| +|-+|...+..+..     .|.+|+++++++.
T Consensus        24 ~~~g~~vlV~G-~G~vG~~~~~~ak~-----~Ga~vi~v~~~~~   61 (170)
T d1e3ja2          24 VQLGTTVLVIG-AGPIGLVSVLAAKA-----YGAFVVCTARSPR   61 (170)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCHH
T ss_pred             CCCCCEEEEEc-ccccchhhHhhHhh-----hcccccccchHHH
Confidence            44567999998 79999999988876     7889999998754

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=86.53  E-value=0.48  Score=36.68  Aligned_cols=33  Identities=24%  Similarity=0.388  Sum_probs=26.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      .||.|.| +|++|+.+++.|.+.    .+++++++..+
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~----~~~elvav~~~   36 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQ----PDMDLVGIFSR   36 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTC----SSEEEEEEEES
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhC----CCcEEEEEEec
Confidence            4799999 799999999999874    47787766543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.19  E-value=0.44  Score=34.86  Aligned_cols=68  Identities=13%  Similarity=0.133  Sum_probs=46.2

Q ss_pred             CCCCEEEEEcCC----------ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc
Q 015961           24 SYQSVALIVGVT----------GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS   93 (397)
Q Consensus        24 ~~~~~ILVtGat----------GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~   93 (397)
                      ...|+|||.|+.          -+-+.+.++.|.+     .|++++.++.+|........-..-+...-...+.+.+.++
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke-----~g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~   79 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALRE-----EGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIE   79 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHH-----HTCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHH-----cCCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHH
Confidence            345899999973          3678999999999     8999999988775432111122344555566777777775


Q ss_pred             cCC
Q 015961           94 QLT   96 (397)
Q Consensus        94 ~~~   96 (397)
                      .-.
T Consensus        80 ~E~   82 (127)
T d1a9xa3          80 KER   82 (127)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            533

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=86.12  E-value=0.33  Score=37.67  Aligned_cols=36  Identities=17%  Similarity=-0.008  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..+|+|||.| +|-.++.++..|.+     .|.+|++++|..
T Consensus        16 ~~~k~vlIlG-aGGaarai~~al~~-----~g~~i~I~nRt~   51 (170)
T d1nyta1          16 RPGLRILLIG-AGGASRGVLLPLLS-----LDCAVTITNRTV   51 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHhcc-----cceEEEeccchH
Confidence            3468999999 58899999999998     678899999864

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.05  E-value=0.15  Score=43.19  Aligned_cols=35  Identities=20%  Similarity=0.256  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |+-+|+|.| .|..|..++..|.+     .|++|+++.|++
T Consensus         1 mk~~V~IvG-aGp~Gl~~A~~L~~-----~G~~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAIIG-AGPSGLLLGQLLHK-----AGIDNVILERQT   35 (292)
T ss_dssp             CBCSEEEEC-CSHHHHHHHHHHHH-----HTCCEEEECSSC
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHH-----CCCCEEEEeCCC
Confidence            555799999 59999999999998     899999999875

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=85.97  E-value=0.38  Score=31.94  Aligned_cols=51  Identities=14%  Similarity=0.165  Sum_probs=37.3

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD   84 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d   84 (397)
                      |+|.|.| +|.+|+-++..-.+     -|++|+.++..+...-. ....+++..++.+
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~-----LG~~v~vldp~~~~pa~-~~a~dvIT~e~E~   52 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEP-----LGIAVWPVGLDAEPAAV-PFQQSVITAEIER   52 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGG-----GTEEEEEECTTSCGGGS-CGGGSEEEESSSC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHH-----cCCEEEEEcCCCCCccc-ccccceEEEeecc
Confidence            6899999 79999999999988     79999999976543210 1233566666654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.82  E-value=0.3  Score=37.54  Aligned_cols=37  Identities=27%  Similarity=0.168  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ..+|+++|.| .|.+|+.+++.|..     .|.+|++....|.
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg-----~G~~V~v~e~dp~   58 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRG-----FGARVIITEIDPI   58 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             ecCCEEEEec-cccccHHHHHHHHh-----CCCeeEeeecccc
Confidence            4579999999 99999999999998     8999999988753

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.63  E-value=1.1  Score=32.14  Aligned_cols=64  Identities=8%  Similarity=-0.004  Sum_probs=43.8

Q ss_pred             CCEEEEEcCCC----------hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc
Q 015961           26 QSVALIVGVTG----------IVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ   94 (397)
Q Consensus        26 ~~~ILVtGatG----------fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~   94 (397)
                      .++|||.|+..          +-+.+.++.|.+     .|++++.++.+|....-...-..-+...-...+.+.+.++.
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~-----~g~~~IliN~NPeTVstd~d~aD~lYfeplt~e~v~~Ii~~   77 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALRE-----DGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRI   77 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHH-----TTCEEEEECCCTTSSTTSTTSSSEEECCCCSHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHh-----cCCeEEEEecChhhhhcChhhcCceEEccCCHHHHHHHHHH
Confidence            47899999632          789999999999     89999999888765322112223344455566777666544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=85.39  E-value=0.38  Score=38.51  Aligned_cols=36  Identities=22%  Similarity=0.201  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      +..+++|+|-| -|.+|+++++.|.+     .|.+|++.+.+
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~-----~Gakvvv~d~d   59 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAE-----AGAQLLVADTD   59 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEecch
Confidence            46779999999 89999999999999     89999987764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.10  E-value=0.32  Score=41.69  Aligned_cols=36  Identities=22%  Similarity=0.230  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .+..||+|.| +|.-|-..+.+|.+     .|++|+++-.+.
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~-----~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQS-----FGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHh-----CCCCEEEEeCCC
Confidence            3456899999 69999999999998     899999997653

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=84.93  E-value=0.11  Score=40.94  Aligned_cols=33  Identities=12%  Similarity=0.208  Sum_probs=26.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   63 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R   63 (397)
                      |+.+|+|.| .|++|-.++..|.+     .|.+|.++.+
T Consensus         2 m~a~VvIIG-gG~~G~e~A~~l~~-----~g~~v~i~~~   34 (183)
T d1d7ya1           2 LKAPVVVLG-AGLASVSFVAELRQ-----AGYQGLITVV   34 (183)
T ss_dssp             CCSSEEEEC-CSHHHHHHHHHHHH-----HTCCSCEEEE
T ss_pred             CCCCEEEEC-ccHHHHHHHHHHHh-----cCCceEEEEE
Confidence            677899999 69999999999987     5666444443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.72  E-value=0.3  Score=40.95  Aligned_cols=33  Identities=21%  Similarity=0.161  Sum_probs=29.6

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ++|+|.| +|.-|...+.+|.+     .|++|+++-+++
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~-----~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRS-----RGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHT-----TTCCEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHh-----CCCCEEEEecCC
Confidence            4699999 59999999999999     899999998864

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=84.56  E-value=0.38  Score=37.11  Aligned_cols=39  Identities=23%  Similarity=0.262  Sum_probs=31.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~   66 (397)
                      ...+.+|+|+|++|-+|...+..+..     .| .+|+++++++.
T Consensus        25 ~~~g~~vlV~G~~G~vG~~~~~~~~~-----~g~~~V~~~~~~~~   64 (170)
T d1jvba2          25 LDPTKTLLVVGAGGGLGTMAVQIAKA-----VSGATIIGVDVREE   64 (170)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----HTCCEEEEEESSHH
T ss_pred             CCCCCEEEEEeccccceeeeeecccc-----cccccccccccchh
Confidence            34567999999999999999888876     55 47888887653

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.39  E-value=0.51  Score=35.93  Aligned_cols=31  Identities=32%  Similarity=0.482  Sum_probs=26.7

Q ss_pred             EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ||+|.| .|++|-.++..|.+      +.+|+++.|.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~~------~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLSQ------TYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT------TSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHHc------CCCEEEEeccc
Confidence            799999 59999999999964      66999998764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.02  E-value=0.54  Score=40.61  Aligned_cols=36  Identities=25%  Similarity=0.133  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .|+|+|.| +|.-|-..+..|++..   .+++|+++-|+.
T Consensus         4 ~KrVaIIG-aG~sGl~~A~~L~~~~---~~~~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAIIG-AGPSGLVTAKALLAEK---AFDQVTLFERRG   39 (335)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTT---CCSEEEEECSSS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHhC---CCCCEEEEECCC
Confidence            37899999 6999999999998621   236999999875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.87  E-value=0.15  Score=40.52  Aligned_cols=37  Identities=19%  Similarity=0.257  Sum_probs=28.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARR   64 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~   64 (397)
                      +..+++|||+||+|-+|+..++....     .|.+ |++.+++
T Consensus        28 ~G~~etVLI~gaaGgVG~~aiQlak~-----~Ga~~vi~~~~~   65 (187)
T d1vj1a2          28 AGSNQTMVVSGAAGACGSLAGQIGHL-----LGCSRVVGICGT   65 (187)
T ss_dssp             TTSCCEEEESSTTSTTGGGHHHHHHH-----TTCSEEEEEESS
T ss_pred             CCCCCEEEEECCCchhhHHHHHHHHH-----cCCcceecccch
Confidence            33447899999999999999988876     5765 5555554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=83.79  E-value=0.58  Score=38.57  Aligned_cols=36  Identities=28%  Similarity=0.088  Sum_probs=31.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      ...+++|+|-| -|.+|+++++.|.+     .|.+|++++-.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~-----~Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEK-----MGAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHH-----cCCeEEEeecc
Confidence            45678999999 89999999999999     89999988864

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.26  E-value=0.98  Score=35.97  Aligned_cols=43  Identities=14%  Similarity=0.101  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCChhHHH-HHHHcc---CCCCCCCCcEEEEEeCCCCC
Q 015961           25 YQSVALIVGVTGIVGNS-LAEILP---LPDTPGGPWKVYGVARRPKP   67 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~-lv~~L~---~~~~~~~g~~V~~l~R~~~~   67 (397)
                      ..-.++|+||||-+... |...|-   .......+..|+++.|++..
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s   65 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLT   65 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCS
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCC
Confidence            34579999999999876 444442   22222257889999998643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.23  E-value=0.74  Score=35.77  Aligned_cols=35  Identities=17%  Similarity=0.108  Sum_probs=29.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..+|+|||.| +|..++.++..|.+     .| +|+++.|..
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~-----~~-~i~I~nR~~   50 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAK-----DN-NIIIANRTV   50 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTS-----SS-EEEEECSSH
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcc-----cc-ceeeehhhh
Confidence            4568999999 68899999999976     45 899999964

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=82.83  E-value=0.57  Score=36.88  Aligned_cols=39  Identities=23%  Similarity=0.129  Sum_probs=31.0

Q ss_pred             CCCCCEEEE-EcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           23 RSYQSVALI-VGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILV-tGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ...+++++| +||+|-+|...++....     .|.+|++++|.+.
T Consensus        26 ~~~g~~vli~~ga~g~vG~~aiqlAk~-----~Ga~vI~~v~~~~   65 (189)
T d1gu7a2          26 LTPGKDWFIQNGGTSAVGKYASQIGKL-----LNFNSISVIRDRP   65 (189)
T ss_dssp             CCTTTCEEEESCTTSHHHHHHHHHHHH-----HTCEEEEEECCCT
T ss_pred             CCCCCEEEEEeCCCchHHHHHHHHHhh-----cCCeEEEEEeccc
Confidence            334566777 58999999999888876     7999999998754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.62  E-value=0.39  Score=41.00  Aligned_cols=33  Identities=30%  Similarity=0.311  Sum_probs=29.5

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      ..|+|.| +|+.|..++++|.+     .|++|.++.+++
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~-----~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKK-----LNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGG-----GTCCEEEECSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHh-----CCCcEEEEECCC
Confidence            3699999 69999999999998     799999999865

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.30  E-value=0.6  Score=39.50  Aligned_cols=37  Identities=19%  Similarity=0.007  Sum_probs=32.2

Q ss_pred             cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      +...+++|+|-| -|.+|+++++.|.+     .|.+|++++-.
T Consensus        32 ~~L~gktvaIqG-fGnVG~~~A~~L~e-----~Gakvv~vsD~   68 (293)
T d1hwxa1          32 PGFGDKTFAVQG-FGNVGLHSMRYLHR-----FGAKCVAVGES   68 (293)
T ss_dssp             SSSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEEET
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEEcc
Confidence            345678999999 79999999999998     89999988864

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=82.27  E-value=0.42  Score=36.94  Aligned_cols=34  Identities=15%  Similarity=0.228  Sum_probs=28.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~   65 (397)
                      +++|||.| +|-.|++++..|.+     .|. +|++++|+.
T Consensus        17 ~~~vlIlG-aGGaarai~~aL~~-----~g~~~I~I~nR~~   51 (167)
T d1npya1          17 NAKVIVHG-SGGMAKAVVAAFKN-----SGFEKLKIYARNV   51 (167)
T ss_dssp             TSCEEEEC-SSTTHHHHHHHHHH-----TTCCCEEEECSCH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEecccH
Confidence            47899999 59999999999998     676 588888864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.02  E-value=0.37  Score=39.03  Aligned_cols=31  Identities=26%  Similarity=0.462  Sum_probs=28.7

Q ss_pred             EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |+|.| +|+-|...+.+|.+     .|++|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~-----~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSV-----DGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHH-----CCCCEEEEcCCC
Confidence            79999 79999999999998     899999999875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.89  E-value=0.72  Score=35.50  Aligned_cols=38  Identities=13%  Similarity=0.049  Sum_probs=30.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPK   66 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~   66 (397)
                      ...+.+|+|+|+ |-+|...+..+..     .|. +|++.++++.
T Consensus        24 ~~~gd~VlI~G~-G~iG~~~~~~a~~-----~G~~~Vi~~d~~~~   62 (171)
T d1pl8a2          24 VTLGHKVLVCGA-GPIGMVTLLVAKA-----MGAAQVVVTDLSAT   62 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHH-----TTCSEEEEEESCHH
T ss_pred             CCCCCEEEEECC-CccHHHHHHHHHH-----cCCceEEeccCCHH
Confidence            445678999985 9999999988877     677 6999988753

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=81.87  E-value=1  Score=34.51  Aligned_cols=37  Identities=22%  Similarity=0.300  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      +..+|+|+|.|.+..+|+.|+..|.+     +|..|+.....
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~-----~gatVt~~h~~   70 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLL-----AGCTTTVTHRF   70 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHT-----TTCEEEEECSS
T ss_pred             ccccceEEEEeccccccHHHHHHHHH-----hhccccccccc
Confidence            34579999999999999999999998     78899877654

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=81.74  E-value=0.5  Score=37.30  Aligned_cols=35  Identities=11%  Similarity=0.024  Sum_probs=28.0

Q ss_pred             CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      |||+|.| .|++|-.++..|.+..   .+.+|+.+.|.+
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~---~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLH---PDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHC---TTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcC---CCCeEEEEeCCC
Confidence            4799999 5999999999997522   356899888864

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.85  E-value=0.74  Score=33.07  Aligned_cols=33  Identities=21%  Similarity=0.218  Sum_probs=29.0

Q ss_pred             CEEEEEcCC---ChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961           27 SVALIVGVT---GIVGNSLAEILPLPDTPGGPWKVYGVARR   64 (397)
Q Consensus        27 ~~ILVtGat---GfiG~~lv~~L~~~~~~~~g~~V~~l~R~   64 (397)
                      |+|.|.|||   +-.|..+++.|++     .||+|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~-----~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLS-----KGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHH-----TTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHH-----CCCEEEEEccc
Confidence            689999988   7799999999998     89999988654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.71  E-value=0.47  Score=40.52  Aligned_cols=36  Identities=19%  Similarity=0.054  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961           25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   66 (397)
Q Consensus        25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~   66 (397)
                      ..-.|+|+| +|+.|-.++.+|.+     .|.+|+++.+.+.
T Consensus         6 ~~~dV~IIG-AG~sGl~~a~~L~~-----~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           6 EEVDVLVVG-AGFSGLYALYRLRE-----LGRSVHVIETAGD   41 (298)
T ss_dssp             SEEEEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSSS
T ss_pred             CCCCEEEEC-ccHHHHHHHHHHHh-----CCCCEEEEEcCCC
Confidence            345799999 59999999999998     8999999998653

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=80.43  E-value=0.45  Score=36.85  Aligned_cols=34  Identities=26%  Similarity=0.269  Sum_probs=27.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961           26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   65 (397)
Q Consensus        26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~   65 (397)
                      .++|+|.| .|++|-.++..|.+     .|.+|+.+.+.+
T Consensus         3 ~~~VvIIG-gG~~G~e~A~~l~~-----~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVG-TGLAGVEVAFGLRA-----SGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHH-----TTCCSEEEEECS
T ss_pred             CCCEEEEC-CcHHHHHHHHHHHH-----cCCceEEEEecC
Confidence            46899999 69999999999998     677766555443