Citrus Sinensis ID: 015962

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
cccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHcccccccccccccccccEEEEEEEcccccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEcccccEEcHHHHHHHHHcccccccEEEEEEEccccccccccccEEccccccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHHcccEEEccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHcccHHHHHHHHHcc
cccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEcccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHcccccHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEccccccccccccEEEcccEEccccccccccccccccEEEEcHHHHHHHHHccHHHHHHcHccccHHHHHHcccEEEEccccccccccccccEEEcccccEEEEEEcccccccccHHHHHHHHHHHccccccEEEEEc
msfkstggefasrnlipRKWALFLCACsfcagmsftnrmwmmpeskgvariskteeienpelkavkhesnnnTEKLAMVEQAIQSQDKRLDGLKTKITAVraerdsvslshpvkgtsnisgsmlKRKYFMVIGINTafssrkrrdsvratwmpqgekRKMLEEAKGIIIRFVIghsatsggildKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLaahrtkprvyvgcmksgpvlarkgvkyyepeywkfgeignkyfRHATGQLYALSKDLATYISINQHLLHKyanedvslgswfigldvehvddrrlccgtppdcewkaqlgktcvatfdwrcsgickSVERIKEVHELCGEGEDTLWRASF
msfkstggefasrnlipRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEeienpelkavkhesnnnTEKLAMVEQAIQSQDKRLDGLKTKITavraerdsvslshpvkgtsnisgsmlkrKYFMVIGINtafssrkrrdsvratwmpqgekrkMLEEAKGIIIRFvighsatsGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTlaahrtkprvyvgcmksgpvlarkgvKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGtppdcewkaqlgKTCVATFDWRCSGICKSVERIKEVhelcgegedtlwrasf
MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
************RNLIPRKWALFLCACSFCAGMSFTNRMWMM********************************************************************************MLKRKYFMVIGINTAFS*********************LEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLW****
*******************WALFLCACSFCAGMSFTNRMW*************************************MVEQAIQSQDKRLDGLKTKITAVRAE*************************FMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
********EFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFS*********ATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
**************LIPRKWALFLCACSFCAGMSFTNRMWMMP*****************ELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERD*******************KRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELKAVKHESNNNTEKxxxxxxxxxxxxxxxxxxxxxITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query397 2.2.26 [Sep-21-2011]
A8MRC7407 Probable beta-1,3-galacto yes no 0.982 0.958 0.655 1e-161
Q9ZV71409 Probable beta-1,3-galacto no no 1.0 0.970 0.635 1e-151
Q9SAA4384 Probable beta-1,3-galacto no no 0.959 0.992 0.660 1e-150
Q8LEJ9407 Probable beta-1,3-galacto no no 0.972 0.948 0.637 1e-146
Q6NQB7393 Beta-1,3-galactosyltransf no no 0.931 0.941 0.590 1e-134
Q9MAP8399 Probable beta-1,3-galacto no no 0.962 0.957 0.572 1e-133
Q9LM60398 Probable beta-1,3-galacto no no 0.937 0.934 0.555 1e-125
Q9C809395 Probable beta-1,3-galacto no no 0.939 0.944 0.554 1e-121
Q94F27338 Probable beta-1,3-galacto no no 0.775 0.911 0.404 3e-63
Q5XEZ1346 Probable beta-1,3-galacto no no 0.566 0.650 0.495 9e-58
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1 Back     alignment and function desciption
 Score =  567 bits (1461), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 263/401 (65%), Positives = 319/401 (79%), Gaps = 11/401 (2%)

Query: 8   GEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIEN 59
           GE++SR+ + RKW + LC  SFC GM FTNRMW +PESKG++  S TE        E  N
Sbjct: 7   GEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCN 66

Query: 60  PEL---KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGT 116
           P+    K VK +      ++A    A+Q+ DK +  L+ ++ A R+ ++S+    P+   
Sbjct: 67  PKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDD 126

Query: 117 SNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHS 176
                   +R++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHS
Sbjct: 127 MGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHS 186

Query: 177 ATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDV 236
           AT+GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDV
Sbjct: 187 ATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDV 246

Query: 237 HVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQ 296
           HVN+ATLG TL  HR KPRVY+GCMKSGPVL++KGV+Y+EPEYWKFGE GNKYFRHATGQ
Sbjct: 247 HVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQ 306

Query: 297 LYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQL 356
           LYA+S+DLA+YISINQH+LHKYANEDVSLG+WFIG+DV+H+DDRRLCCGTPPDCEWKAQ 
Sbjct: 307 LYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQA 366

Query: 357 GKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF 397
           G  CVA+FDW CSGIC+S +RIKEVH  CGEGE  LW A+F
Sbjct: 367 GNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2 Back     alignment and function description
>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1 Back     alignment and function description
>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1 Back     alignment and function description
>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1 Back     alignment and function description
>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1 Back     alignment and function description
>sp|Q5XEZ1|B3GT9_ARATH Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
359494044405 PREDICTED: probable beta-1,3-galactosylt 1.0 0.980 0.683 1e-168
224128958405 predicted protein [Populus trichocarpa] 1.0 0.980 0.679 1e-166
359494046411 PREDICTED: probable beta-1,3-galactosylt 1.0 0.965 0.671 1e-166
15220440404 putative beta-1,3-galactosyltransferase 0.982 0.965 0.660 1e-160
359483432406 PREDICTED: probable beta-1,3-galactosylt 1.0 0.977 0.672 1e-159
225447013407 PREDICTED: probable beta-1,3-galactosylt 0.997 0.972 0.681 1e-159
145323746407 putative beta-1,3-galactosyltransferase 0.982 0.958 0.655 1e-159
297848780407 galactosyltransferase family protein [Ar 0.979 0.955 0.66 1e-159
356542818406 PREDICTED: probable beta-1,3-galactosylt 0.992 0.970 0.669 1e-159
147776969373 hypothetical protein VITISV_007689 [Viti 0.919 0.978 0.699 1e-158
>gi|359494044|ref|XP_002279814.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 1 [Vitis vinifera] gi|297737446|emb|CBI26647.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 277/405 (68%), Positives = 332/405 (81%), Gaps = 8/405 (1%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIE-- 58
           MS+KS G E +S++++ RKW L  C   FCAGM F++RMW MPE+KG++R ++TE+ E  
Sbjct: 1   MSWKSRGIEPSSKSVVSRKWTLLFCIGCFCAGMLFSDRMWTMPEAKGISRTTRTEDEELK 60

Query: 59  ------NPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHP 112
                  P  K VKH+S +   +++    AIQ+ DK +  L+ ++ A RA ++S+    P
Sbjct: 61  LVSEGCAPTTKDVKHKSKDILGEVSRTHYAIQTLDKTISNLEMELAAARAAQESILNGSP 120

Query: 113 VKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFV 172
           +     I+ S  +RKY MVIGINTAFSSRKRRDSVRATWMPQG+KRK LEE KGII+RFV
Sbjct: 121 ITEDLPITKSSGRRKYLMVIGINTAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIIVRFV 180

Query: 173 IGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKV 232
           IGHSATSGGILD+AI+AE++ HGDFLRLEH+EGYLELSAKTK YFATAV+MWDA+FY+KV
Sbjct: 181 IGHSATSGGILDRAIEAEDRRHGDFLRLEHVEGYLELSAKTKAYFATAVAMWDADFYVKV 240

Query: 233 DDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRH 292
           DDDVHVN+ATLG TLA HR+KPR+Y+GCMKSGPVLA+KGV+Y+EPEYWKFGE GNKYFRH
Sbjct: 241 DDDVHVNIATLGATLARHRSKPRIYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRH 300

Query: 293 ATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEW 352
           ATGQLYA+SKDLATYISINQH+LHKYANEDVSLGSWFIGLD EH+DDRRLCCGTPPDCEW
Sbjct: 301 ATGQLYAISKDLATYISINQHVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEW 360

Query: 353 KAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF 397
           KAQ G  CVA+FDW CSGIC+S ERI+EVH  CGEGE+ +W A F
Sbjct: 361 KAQAGNICVASFDWSCSGICRSSERIREVHRRCGEGENAVWSAVF 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224128958|ref|XP_002320464.1| predicted protein [Populus trichocarpa] gi|222861237|gb|EEE98779.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359494046|ref|XP_002279828.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|15220440|ref|NP_172009.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gi|14488078|gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gi|2388580|gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gi|21360399|gb|AAM47315.1| At1g05170/YUP8H12_22 [Arabidopsis thaliana] gi|332189676|gb|AEE27797.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359483432|ref|XP_002269104.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225447013|ref|XP_002268282.1| PREDICTED: probable beta-1,3-galactosyltransferase 2 [Vitis vinifera] gi|297739150|emb|CBI28801.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|145323746|ref|NP_001077462.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gi|221222586|sp|A8MRC7.1|B3GT2_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 2 gi|332189677|gb|AEE27798.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297848780|ref|XP_002892271.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297338113|gb|EFH68530.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356542818|ref|XP_003539862.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|147776969|emb|CAN63417.1| hypothetical protein VITISV_007689 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
TAIR|locus:2207225407 AT1G05170 [Arabidopsis thalian 0.982 0.958 0.655 3.1e-147
TAIR|locus:2062545409 AT2G32430 [Arabidopsis thalian 1.0 0.970 0.638 3.3e-143
TAIR|locus:2027352384 AT1G11730 [Arabidopsis thalian 0.959 0.992 0.660 2.1e-139
TAIR|locus:2116452407 AT4G26940 [Arabidopsis thalian 0.972 0.948 0.640 4.4e-139
TAIR|locus:2038031399 AT1G32930 [Arabidopsis thalian 0.962 0.957 0.580 2.1e-123
TAIR|locus:2029471393 AT1G77810 [Arabidopsis thalian 0.937 0.946 0.606 4.4e-123
TAIR|locus:505006138398 DD46 [Arabidopsis thaliana (ta 0.934 0.932 0.559 2.3e-117
TAIR|locus:2154247338 AT5G53340 [Arabidopsis thalian 0.770 0.905 0.416 1.6e-61
TAIR|locus:2116627345 AT4G32120 [Arabidopsis thalian 0.629 0.724 0.443 9.9e-55
TAIR|locus:2059531346 AT2G25300 [Arabidopsis thalian 0.566 0.650 0.495 1.3e-54
TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
 Identities = 263/401 (65%), Positives = 319/401 (79%)

Query:     8 GEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIEN 59
             GE++SR+ + RKW + LC  SFC GM FTNRMW +PESKG++  S TE        E  N
Sbjct:     7 GEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCN 66

Query:    60 PEL---KAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGT 116
             P+    K VK +      ++A    A+Q+ DK +  L+ ++ A R+ ++S+    P+   
Sbjct:    67 PKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDD 126

Query:   117 SNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHS 176
                     +R++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHS
Sbjct:   127 MGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHS 186

Query:   177 ATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDV 236
             AT+GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDV
Sbjct:   187 ATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDV 246

Query:   237 HVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQ 296
             HVN+ATLG TL  HR KPRVY+GCMKSGPVL++KGV+Y+EPEYWKFGE GNKYFRHATGQ
Sbjct:   247 HVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQ 306

Query:   297 LYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQL 356
             LYA+S+DLA+YISINQH+LHKYANEDVSLG+WFIG+DV+H+DDRRLCCGTPPDCEWKAQ 
Sbjct:   307 LYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQA 366

Query:   357 GKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF 397
             G  CVA+FDW CSGIC+S +RIKEVH  CGEGE  LW A+F
Sbjct:   367 GNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A8MRC7B3GT2_ARATH2, ., 4, ., 1, ., -0.65580.98230.9582yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.79LOW CONFIDENCE prediction!
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 0.0
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 5e-59
pfam1333489 pfam13334, DUF4094, Domain of unknown function (DU 2e-19
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 8e-05
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  642 bits (1658), Expect = 0.0
 Identities = 277/408 (67%), Positives = 330/408 (80%), Gaps = 11/408 (2%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE----- 55
           MS KS G E++SR+++ RKW L LC   FCAGM FT+RMW +PESKG++R + TE     
Sbjct: 1   MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLK 60

Query: 56  ------EIENPELKAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSL 109
                 + +    K VK +S +   +++    AIQ+ DK +  L+ ++ A RA ++S+  
Sbjct: 61  LVSEGCDPKTLYQKEVKRDSKDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILN 120

Query: 110 SHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIII 169
             P+      + S  KR+Y MV+GINTAFSSRKRRDSVRATWMPQGEKRK LEE KGIII
Sbjct: 121 GSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIII 180

Query: 170 RFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFY 229
           RFVIGHSATSGGILD+AI+AE++ HGDFLRL+H+EGYLELSAKTKTYFATAV+MWDA+FY
Sbjct: 181 RFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY 240

Query: 230 IKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKY 289
           +KVDDDVHVN+ATLG TL  HR KPRVY+GCMKSGPVL++KGV+Y+EPEYWKFGE GNKY
Sbjct: 241 VKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKY 300

Query: 290 FRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPD 349
           FRHATGQLYA+SKDLA+YISINQH+LHKYANEDVSLGSWFIGLDVEH+DDRRLCCGTPPD
Sbjct: 301 FRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPD 360

Query: 350 CEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF 397
           CEWKAQ G  CVA+FDW CSGIC+S +RIKEVH  CGEGE+ LW A+F
Sbjct: 361 CEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSATF 408

Length = 408
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094) Back     alignment and domain information
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 397
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
PF1333495 DUF4094: Domain of unknown function (DUF4094) 99.94
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.79
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.69
PLN03153 537 hypothetical protein; Provisional 99.14
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.46
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 95.41
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 94.41
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 94.09
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 93.76
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 93.54
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 92.3
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 91.16
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 90.81
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 90.79
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 90.49
PRK11204 420 N-glycosyltransferase; Provisional 88.42
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 87.83
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 87.75
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 87.07
cd06423180 CESA_like CESA_like is the cellulose synthase supe 86.24
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 85.78
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 85.71
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 85.45
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 84.49
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 82.02
PF04646 255 DUF604: Protein of unknown function, DUF604; Inter 81.9
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.8e-109  Score=830.95  Aligned_cols=397  Identities=70%  Similarity=1.207  Sum_probs=367.7

Q ss_pred             CCccccCCCcccCCCCchhHHHHHHHHHHhhHhhhcccCCCCCcCccccccccC--------ccCcchhh---hhccccc
Q 015962            1 MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKT--------EEIENPEL---KAVKHES   69 (397)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~   69 (397)
                      ||.|+||+++++++.||+||+++||++|||+|++||||||..||+.+..+...+        .+||++|+   |..++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~   80 (408)
T PLN03193          1 MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLKLVSEGCDPKTLYQKEVKRDS   80 (408)
T ss_pred             CCcccccccccccccccHHHHHHHHHHHHHHHHhhccccccCCccccccccccchhhhhhhhccccccccccccccccch
Confidence            899999999999999999999999999999999999999999998887654432        37898876   6666799


Q ss_pred             chhhhhHHHHHHHHHHHHHhHHHHhhhHHHhhhccccccCCCCCCCCccCCCCCCCCceeEEEEEeCCCCChHHHHHHHH
Q 015962           70 NNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRA  149 (397)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llI~V~S~~~~~~rR~aIR~  149 (397)
                      ++||+||++||+|||+|+|+|+.||||||+|++.+..+.++.|.+++....+...+++++|||+|+|+|+|++||++||+
T Consensus        81 ~~~~~~~~~t~~~~~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~  160 (408)
T PLN03193         81 KDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRA  160 (408)
T ss_pred             hHHHHHHhhHHHHHHHHhhhhhHHhHHHHHHHhhhhhhccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999977666766665433333345567889999999999999999999999


Q ss_pred             HhhhcchhhhhhhccCCEEEEEEeecCCCCCCchHHHHHHHHhHcCCEEEecccccCCchhhHHHHHHHHHHhcCCceEE
Q 015962          150 TWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFY  229 (397)
Q Consensus       150 TW~~~~~~l~~l~~~~~i~~~FvlG~s~~~~~~l~~~I~~E~~~~~DIL~ldf~DsY~NLt~Ktl~~~~wa~~c~~a~fv  229 (397)
                      |||++++.+.+++.+.+|+++||||++.++++.++++|++|+++|+|||++||+|+|.|||+||+++|+||.++++++||
T Consensus       161 TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~  240 (408)
T PLN03193        161 TWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY  240 (408)
T ss_pred             HHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEE
Confidence            99999877777777899999999999986667899999999999999999999999999999999999999999999999


Q ss_pred             EEeccceeeeHHHHHHHHHhcCCCCceEEEEeccCcccccCCCccccccccccCCCCCCCCCCCCCCceeeCHHHHHHHH
Q 015962          230 IKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYIS  309 (397)
Q Consensus       230 lKvDDDvfVn~~~L~~~L~~~~~~~~lyiG~~~~~pv~rd~~~Kwyvp~~~~fg~p~~~YP~y~~G~gYvlS~dla~~I~  309 (397)
                      ||+|||+|||+++|+.+|+.+..++++|+|||+++|++.++++|||+|++|+||++++.|||||+|+|||||+|+|++|+
T Consensus       241 mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~  320 (408)
T PLN03193        241 VKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYIS  320 (408)
T ss_pred             EEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHH
Confidence            99999999999999999998877778999999989998778889999999999988999999999999999999999999


Q ss_pred             HhccccCCCCcchHHHHHHHhcCCCeEecCCCcccCCCCCcccccccCCcccccccccccccchhHHHHHHhhccCcchH
Q 015962          310 INQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGE  389 (397)
Q Consensus       310 ~~~~~l~~~~~EDV~vG~~l~~L~v~~i~~~~f~~~~~~~~~wk~~~~~~C~~sf~~~~~g~c~~~~~~~~vH~~~p~~~  389 (397)
                      .++..++.|++|||+||+||.+|+|+|+|+++|||+++|+|+||++++++|+++|||+|||+|++.+||.++|+.|+|+.
T Consensus       321 ~n~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~~~~~~csg~c~~~~~~~~~h~~c~~~~  400 (408)
T PLN03193        321 INQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGE  400 (408)
T ss_pred             hChhhhcccCcchhhhhhHhccCCceeeecccccCCCCccccccccCCCeeEEEecccCcccCCHHHHHHHHHHhcCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhcC
Q 015962          390 DTLWRASF  397 (397)
Q Consensus       390 ~~~W~~~~  397 (397)
                      .++|+++|
T Consensus       401 ~~~~~~~~  408 (408)
T PLN03193        401 NALWSATF  408 (408)
T ss_pred             ccceeecC
Confidence            99999876

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>PF13334 DUF4094: Domain of unknown function (DUF4094) Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 41/284 (14%), Positives = 76/284 (26%), Gaps = 87/284 (30%)

Query: 162 EEAKGII--------IRFVIGHSATSG-GILDKAIDAEEKMHGDFLRLEHI-EGYLELSA 211
           EE   II           +     +    ++ K ++   +++  FL +  I     + S 
Sbjct: 49  EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL-MSPIKTEQRQPSM 107

Query: 212 KTKTYFATAVSMW-DAEFYIKVDDDVHVNLATLGMTL--AAHRTKPRVYV------GCMK 262
            T+ Y      ++ D + + K     +V+     + L  A    +P   V      G  K
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKY----NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 263 SGPVLARKGVKYYEPE-------YW-KFG---------EIGNKYFRHATGQLYALSKDLA 305
           +   +A      Y+ +       +W             E+  K          + S   +
Sbjct: 164 T--WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 306 TYI----SINQHL-----LHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQL 356
                  SI   L        Y N    L      L + +V + +          W A  
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYEN---CL------LVLLNVQNAKA---------WNA-- 261

Query: 357 GKTCVATFDWRC--------SGICKSVERIKEVHELCGEGEDTL 392
                  F+  C          +   +      H        TL
Sbjct: 262 -------FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.92
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 91.85
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 89.22
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 87.09
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 85.05
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 84.71
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=99.92  E-value=3e-25  Score=215.32  Aligned_cols=194  Identities=17%  Similarity=0.185  Sum_probs=132.4

Q ss_pred             CceeEEEEEeCCCCC-hHHHHHHHHHhhhcchhhhhhhccCCEEEEEEeecCCCCCCchHHHHHHHHhHcCCEEEeccc-
Q 015962          126 RKYFMVIGINTAFSS-RKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHI-  203 (397)
Q Consensus       126 ~~~~llI~V~S~~~~-~~rR~aIR~TW~~~~~~l~~l~~~~~i~~~FvlG~s~~~~~~l~~~I~~E~~~~~DIL~ldf~-  203 (397)
                      ..-.|+|+|+|++.+ .+|+++||+||++.+..       .    .||.+...  +..    +...  ..+++++.++. 
T Consensus        11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-------~----~fifsd~~--d~~----l~~~--~~~~~~~~~~~~   71 (280)
T 2j0a_A           11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-------Q----TFIFTDSP--DER----LQER--LGPHLVVTQCSA   71 (280)
T ss_dssp             CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-------G----EEEEESSC--CHH----HHHH--HGGGEEECCC--
T ss_pred             CcccEEEEEECcHHHHHHHHHHHHHHHhccCCC-------c----eEEEcCCC--ccc----cccc--ccccceeccccc
Confidence            345688899999984 57889999999997631       1    24333322  122    2222  35678888764 


Q ss_pred             -ccCCchhhHHHHHHHHHHhcCCceEEEEeccceeeeHHHHHHHHHhcCCCCceEEEEecc-CcccccCCCccccccccc
Q 015962          204 -EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKS-GPVLARKGVKYYEPEYWK  281 (397)
Q Consensus       204 -DsY~NLt~Ktl~~~~wa~~c~~a~fvlKvDDDvfVn~~~L~~~L~~~~~~~~lyiG~~~~-~pv~rd~~~Kwyvp~~~~  281 (397)
                       +++.+|+.|+...+.+.. +++++|++|+|||+|||+++|+++|..+++.+++|+|+... .|+.    .++++|...+
T Consensus        72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~----~~~~~~~~~~  146 (280)
T 2j0a_A           72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH----ASELQSKQRT  146 (280)
T ss_dssp             -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred             cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc----ccccCccccc
Confidence             467899999999998764 36999999999999999999999999999999999999753 3432    1345554322


Q ss_pred             cCCCCCCCCCCC-CCCceeeCHHHHHHHHHhcccc-------CCCCcchHHHHHHHh-cCCCeEecCCCcccCCC
Q 015962          282 FGEIGNKYFRHA-TGQLYALSKDLATYISINQHLL-------HKYANEDVSLGSWFI-GLDVEHVDDRRLCCGTP  347 (397)
Q Consensus       282 fg~p~~~YP~y~-~G~gYvlS~dla~~I~~~~~~l-------~~~~~EDV~vG~~l~-~L~v~~i~~~~f~~~~~  347 (397)
                         +...|+ || +|+|||||++++++|+.....-       .....||+++|.|+. .+||.+++...|+...+
T Consensus       147 ---~~~~~~-y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~  217 (280)
T 2j0a_A          147 ---KLVRFW-FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE  217 (280)
T ss_dssp             -------CC-EECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred             ---cccccC-cccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence               222454 66 6789999999999999753322       223469999999998 99999999999986443
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 87.73
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.73  E-value=5.3  Score=35.12  Aligned_cols=159  Identities=13%  Similarity=0.108  Sum_probs=80.6

Q ss_pred             EEEEEeecCCCCCCchHHHHHHHHhHcCCEEE-ecccccCCchhhHHHHHHHHHHhcCCceEEEEeccceeeeHHHHHHH
Q 015962          168 IIRFVIGHSATSGGILDKAIDAEEKMHGDFLR-LEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMT  246 (397)
Q Consensus       168 ~~~FvlG~s~~~~~~l~~~I~~E~~~~~DIL~-ldf~DsY~NLt~Ktl~~~~wa~~c~~a~fvlKvDDDvfVn~~~L~~~  246 (397)
                      .++.|=.-|.  ++.....+++-.+.+.+-+. +...++ ...+    .+...+......+|++.+|+|+.+..+.|..+
T Consensus        56 EIIvVDdgS~--d~~~~~~l~~~~~~~~~~i~vi~~~~n-~G~~----~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l  128 (328)
T d1xhba2          56 EIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQR-SGLI----RARLKGAAVSRGQVITFLDAHCECTAGWLEPL  128 (328)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSC-CCHH----HHHHHHHHHCCSSEEEEEESSEEECTTCHHHH
T ss_pred             EEEEEECCCC--hhhHHHHHHHHHHhcCCCeEEEEeccc-ccch----HHHHHHHHhhhcceeeecCcccccChhHHHHH
Confidence            4555543343  34444455554555555333 332222 1222    24455555557899999999999998887776


Q ss_pred             HHhcCCCCc-eEEEEec--c---------Cccccc-----CCCccc-ccccc---ccCC-CCCCCCCCCCCCceeeCHHH
Q 015962          247 LAAHRTKPR-VYVGCMK--S---------GPVLAR-----KGVKYY-EPEYW---KFGE-IGNKYFRHATGQLYALSKDL  304 (397)
Q Consensus       247 L~~~~~~~~-lyiG~~~--~---------~pv~rd-----~~~Kwy-vp~~~---~fg~-p~~~YP~y~~G~gYvlS~dl  304 (397)
                      +......+. +..|.+.  .         .+..+.     ....|+ .|...   ..+. .....-+++.|+++++++++
T Consensus       129 ~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  208 (328)
T d1xhba2         129 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY  208 (328)
T ss_dssp             HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred             HHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHH
Confidence            654432222 2223221  1         011000     001111 11100   0000 01122346789999999999


Q ss_pred             HHHHHHhccccCCCCcchHHHHHHHhcCC
Q 015962          305 ATYISINQHLLHKYANEDVSLGSWFIGLD  333 (397)
Q Consensus       305 a~~I~~~~~~l~~~~~EDV~vG~~l~~L~  333 (397)
                      ...+---.+.+..+..||+-++.-+...|
T Consensus       209 f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G  237 (328)
T d1xhba2         209 FQEIGTYDAGMDIWGGENLEISFRIWQCG  237 (328)
T ss_dssp             HHHTTSCCTTSCTTCCCCSHHHHHHHHTT
T ss_pred             HHHhCCCCCCCcCcCchHHHHHHHHHHhC
Confidence            98875433444445579988876665444