Citrus Sinensis ID: 016014
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 397 | ||||||
| 357506723 | 599 | ZIP transporter [Medicago truncatula] gi | 0.874 | 0.579 | 0.812 | 1e-159 | |
| 449449839 | 594 | PREDICTED: putative zinc transporter At3 | 0.874 | 0.584 | 0.804 | 1e-158 | |
| 449510963 | 594 | PREDICTED: putative zinc transporter At3 | 0.874 | 0.584 | 0.804 | 1e-158 | |
| 255582020 | 596 | metal ion transporter, putative [Ricinus | 0.874 | 0.582 | 0.853 | 1e-156 | |
| 224069844 | 605 | ZIP transporter [Populus trichocarpa] gi | 0.874 | 0.573 | 0.824 | 1e-151 | |
| 147805442 | 596 | hypothetical protein VITISV_036615 [Viti | 0.874 | 0.582 | 0.818 | 1e-149 | |
| 225439099 | 596 | PREDICTED: putative zinc transporter At3 | 0.874 | 0.582 | 0.812 | 1e-148 | |
| 296085837 | 610 | unnamed protein product [Vitis vinifera] | 0.869 | 0.565 | 0.811 | 1e-146 | |
| 356532115 | 598 | PREDICTED: putative zinc transporter At3 | 0.874 | 0.580 | 0.806 | 1e-145 | |
| 356566816 | 598 | PREDICTED: putative zinc transporter At3 | 0.874 | 0.580 | 0.809 | 1e-141 |
| >gi|357506723|ref|XP_003623650.1| ZIP transporter [Medicago truncatula] gi|355498665|gb|AES79868.1| ZIP transporter [Medicago truncatula] | Back alignment and taxonomy information |
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Score = 566 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 282/347 (81%), Positives = 312/347 (89%)
Query: 51 QPIVAVPSFICADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVA 110
QPIVAVPSFICADAF+KFLPFCTGFAAGCMIWMVIAEVLPDAFKEASP+ VASAAT+SVA
Sbjct: 253 QPIVAVPSFICADAFSKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPSQVASAATLSVA 312
Query: 111 FMEALSTLFQNLSHDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAAS 170
FMEALSTLFQN SHDYNS+DASG+FVSLLFGLGP LGGI L+AFA AF L+HALLMG A
Sbjct: 313 FMEALSTLFQNFSHDYNSEDASGFFVSLLFGLGPSLGGIFLVAFALAFHLRHALLMGIAC 372
Query: 171 GIAFVLGGWRPVQLLLSSKMGFIPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTV 230
GIAFVLG WRPVQL+LS KMG +P+ LLA GAA +H+SSS +LKLA KKTS+ +LPT+
Sbjct: 373 GIAFVLGAWRPVQLILSYKMGLVPVSSLLALGAALIHMSSSGVLKLATSKKTSAHNLPTI 432
Query: 231 NSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVA 290
FP+S+ TLQSF+SCGAVALHA+AEGLALGVAAPKAYGLG+HMVLPVSLHGLPRGAAVA
Sbjct: 433 TGFPLSIHTLQSFISCGAVALHAVAEGLALGVAAPKAYGLGRHMVLPVSLHGLPRGAAVA 492
Query: 291 SCIYGATASLPASLAAAALIGFMGPTSAIGAILAGIDYSGLDHVMVFACGGLLPSFGRIV 350
SCI+GAT S SLAAAA+IGFMGP SAIGAIL+GIDYSGLDH+MV ACGGL+PSFG +V
Sbjct: 493 SCIFGATDSWHGSLAAAAIIGFMGPISAIGAILSGIDYSGLDHIMVLACGGLIPSFGNVV 552
Query: 351 KRAASLDTRKGSCGLIFGVGFATLCLTCTKLVCLHTPYCNSAPEAVR 397
KRA SLD RK +CGLI G+ FATLCLT T+LVCLHTPYCNSAPEAVR
Sbjct: 553 KRALSLDKRKSTCGLIIGMTFATLCLTFTRLVCLHTPYCNSAPEAVR 599
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Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449449839|ref|XP_004142672.1| PREDICTED: putative zinc transporter At3g08650-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449510963|ref|XP_004163823.1| PREDICTED: putative zinc transporter At3g08650-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255582020|ref|XP_002531807.1| metal ion transporter, putative [Ricinus communis] gi|223528541|gb|EEF30564.1| metal ion transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224069844|ref|XP_002326428.1| ZIP transporter [Populus trichocarpa] gi|222833621|gb|EEE72098.1| ZIP transporter [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|147805442|emb|CAN69618.1| hypothetical protein VITISV_036615 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225439099|ref|XP_002266161.1| PREDICTED: putative zinc transporter At3g08650 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296085837|emb|CBI31161.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356532115|ref|XP_003534619.1| PREDICTED: putative zinc transporter At3g08650-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356566816|ref|XP_003551623.1| PREDICTED: putative zinc transporter At3g08650-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 397 | ||||||
| TAIR|locus:2077853 | 619 | AT3G08650 [Arabidopsis thalian | 0.874 | 0.560 | 0.603 | 6.4e-108 |
| TAIR|locus:2077853 AT3G08650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1047 (373.6 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 210/348 (60%), Positives = 242/348 (69%)
Query: 51 QPIVAVPSFICADAFNKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPTPVASAATISVA 110
QP+VAVP+F+CADAF+KFLPFCTGFAAGCMIWMVIAEVLPDAFKEASP+ VASAATISVA
Sbjct: 272 QPLVAVPAFLCADAFSKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASPSQVASAATISVA 331
Query: 111 FMEALSTLFQNLSHDYNSQDASGYFVSXXXXXXXXXXXXXXXAFAHAFSLQHALLMGAAS 170
MEALSTLF++ +HDYNS+DASG+FVS A A F LQHALLMG AS
Sbjct: 332 SMEALSTLFESFTHDYNSEDASGFFVSLLFGLGPLLGGVFLVASAVTFRLQHALLMGVAS 391
Query: 171 GIAFVLGGWRPVQLLLSSKMGFIPXXXXXXXXXXXXHVSSSSILKLAGRKKTSSVSLPT- 229
GIAFVLG WRP+QLLLS+KMG IP H +SS+IL + GRKK+ + SL
Sbjct: 392 GIAFVLGLWRPLQLLLSAKMGLIPLVSLLAIGAGLSHFTSSTILNVTGRKKSRAGSLINP 451
Query: 230 VNSFPVSVLTLQSFLSCXXXXXXXXXXXXXXXXXXPKAYGLGQHMVLPVSLHGLPRGAAV 289
V +FP SV+TLQS L+C P AYGLG+HMVLPVSLHGLPRG AV
Sbjct: 452 VTNFPTSVITLQSLLACGAVGFHALAEGLALGVAAPNAYGLGRHMVLPVSLHGLPRGTAV 511
Query: 290 ASCIYGXXXXXXXXXXXXXXIGFMGPTSAIGAILAGIDYSGLDHVMVFACGGLLPSFGRI 349
ASC++G IGF+GP SAIG+ILAGIDYSGLDHVMV ACGGLLPSF ++
Sbjct: 512 ASCVFGATDSWHAALAAAALIGFVGPISAIGSILAGIDYSGLDHVMVVACGGLLPSFWQV 571
Query: 350 VKRAASLDTRKGSCGLIFGVGFAXXXXXXXXXXXXXXPYCNSAPEAVR 397
+KRA L+ RKGS G++ G+ A PYCNSAPEAVR
Sbjct: 572 IKRAVRLERRKGSVGMVLGLACAVVCLTFTRLVCLHTPYCNSAPEAVR 619
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 397 | |||
| COG0428 | 266 | COG0428, COG0428, Predicted divalent heavy-metal c | 5e-06 | |
| PRK04201 | 265 | PRK04201, PRK04201, zinc transporter ZupT; Provisi | 0.003 |
| >gnl|CDD|223505 COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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Score = 47.4 bits (113), Expect = 5e-06
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 6/225 (2%)
Query: 124 HDYNSQDASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGA-ASGIAFVLGGWR-- 180
++ + LL GL LG ++++ S + ++ A+G+
Sbjct: 1 MSMSNSLLFALLLGLLAGLATALGALLVVLAVRKVSPRVLDILLGFAAGVMLAASFTSLL 60
Query: 181 PVQLLLSSKMGFIPLVFLLAAGAAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTL 240
P + S +G FL A + V +L + S+ + L
Sbjct: 61 PPAIEASGVLGDSTHEFLPALAGFLLGVLFIFLLDRLVPHEHEGKSVEGLEGLRKPNLR- 119
Query: 241 QSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHGLPRGAAVASCIYGATASL 300
+ FL A++LH EGLA+GVA LG + L +++H +P G AVA + GA S
Sbjct: 120 RGFLLALAISLHNFPEGLAIGVAFLSNPSLGIALALAIAIHNIPEGLAVALPLAGAGRSR 179
Query: 301 PASLAAAALIGFMGPTSA-IGAILAGIDYSG-LDHVMVFACGGLL 343
+L A L G P A IGA L GI L + FA G ++
Sbjct: 180 LKALLVAVLSGLAEPLGAVIGAYLLGISSPLVLPFALAFAAGAMV 224
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Length = 266 |
| >gnl|CDD|235253 PRK04201, PRK04201, zinc transporter ZupT; Provisional | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 397 | |||
| PRK04201 | 265 | zinc transporter ZupT; Provisional | 100.0 | |
| COG0428 | 266 | Predicted divalent heavy-metal cations transporter | 100.0 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 99.97 | |
| PLN02159 | 337 | Fe(2+) transport protein | 99.94 | |
| TIGR00820 | 324 | zip ZIP zinc/iron transport family. transport has | 99.93 | |
| KOG1558 | 327 | consensus Fe2+/Zn2+ regulated transporter [Inorgan | 99.91 | |
| KOG2694 | 361 | consensus Putative zinc transporter [Inorganic ion | 99.86 | |
| KOG2693 | 453 | consensus Putative zinc transporter [Inorganic ion | 99.78 | |
| PRK04201 | 265 | zinc transporter ZupT; Provisional | 99.71 | |
| COG0428 | 266 | Predicted divalent heavy-metal cations transporter | 99.53 | |
| KOG2474 | 406 | consensus Zinc transporter and related ZIP domain- | 99.49 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 99.36 | |
| KOG3907 | 303 | consensus ZIP-like zinc transporter proteins [Intr | 99.07 | |
| PLN02159 | 337 | Fe(2+) transport protein | 98.75 | |
| TIGR00820 | 324 | zip ZIP zinc/iron transport family. transport has | 98.43 | |
| KOG1558 | 327 | consensus Fe2+/Zn2+ regulated transporter [Inorgan | 98.35 | |
| KOG2694 | 361 | consensus Putative zinc transporter [Inorganic ion | 96.19 | |
| KOG2474 | 406 | consensus Zinc transporter and related ZIP domain- | 95.2 | |
| KOG2693 | 453 | consensus Putative zinc transporter [Inorganic ion | 92.77 |
| >PRK04201 zinc transporter ZupT; Provisional | Back alignment and domain information |
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Probab=100.00 E-value=3.2e-39 Score=311.77 Aligned_cols=250 Identities=21% Similarity=0.226 Sum_probs=211.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHhhhhhhhhhhhhccchhhhhhhc-------ccChHHHHHHHHHH
Q 016014 130 DASGYFVSLLFGLGPLLGGIVLLAFAHAFSLQHALLMGAASGIAFVLGGWRPVQLLLSS-------KMGFIPLVFLLAAG 202 (397)
Q Consensus 130 ~~~a~~~~~l~gl~t~lGgl~~~~~~~~~~~~l~~ll~faaGvml~~~~~~LlPea~~~-------~~g~~~~~~gf~~G 202 (397)
.+++++++.++++++.+|++++++.++.++|.+++.++|++|+|+++++.|++||+++. ..+.+.+..++++|
T Consensus 4 ~~~a~~~~~l~~~~t~lGal~~~~~~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~~~G 83 (265)
T PRK04201 4 VSVALLLTLLAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAFFGG 83 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999962 23477888999999
Q ss_pred HHHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCcchhhhhHHHHHHHHHhhhhhhhHHhhhhcccchhhHHHHHHHHHhhh
Q 016014 203 AAFVHVSSSSILKLAGRKKTSSVSLPTVNSFPVSVLTLQSFLSCGAVALHALAEGLALGVAAPKAYGLGQHMVLPVSLHG 282 (397)
Q Consensus 203 ~l~~~~ld~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~l~~al~lH~~~EGlaig~s~~~~~~~g~~l~laI~lHn 282 (397)
+++++.+|+..++..+|.++ .+++.+++++..++..+.++++.+|+++||+|||+++|+++..+.+.|+.+++||++||
T Consensus 84 ~ll~~~ld~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~lH~~~eGlalg~~~~~~~~~g~~~~~aI~~H~ 162 (265)
T PRK04201 84 ILGIFLIDRLVPHENPHELM-QKEEMEFQQPLPKSLKRTGILTALAISIHNFPEGIATFVAALSNPELGFPIALAIAIHN 162 (265)
T ss_pred HHHHHHHHHhccccCccccc-ccccccccccchHHHHHHHHHHHHHHHHHhcchhhhhhhhhhcchhhHHHHHHHHHHhc
Confidence 99999999964321111110 00000011111123457889999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcCCChHHHHHHHHHHHhhHHHHHHHHHHh-h--ccHHHHHHHHHHHhhhHH-HhHHHHHHhhhhcC-
Q 016014 283 LPRGAAVASCIYGATASLPASLAAAALIGFMGPTSAIGAILA-G--IDYSGLDHVMVFACGGLL-PSFGRIVKRAASLD- 357 (397)
Q Consensus 283 iPEG~a~~~~L~~~g~s~~~a~~~~~l~~l~~plGa~ig~~~-~--~~~~~~~~lla~aaG~~l-v~~~ellPea~~~~- 357 (397)
+|||++++.+++.++.+|+|++.+++++++++|+|+++|+.+ + .++...++++++++|+|+ ++++|++||++|++
T Consensus 163 iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~el~pea~~~~~ 242 (265)
T PRK04201 163 IPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLGAVLGYLLLGPFISPVVMGAIFAAVAGIMVFISLDELLPAAKEYGP 242 (265)
T ss_pred CcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999999999999999999877 3 467788999999999999 99999999998864
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 016014 358 TRKGSCGLIFGVGFATLCLTCTK 380 (397)
Q Consensus 358 ~~~~~~~~~~G~~l~~~~l~~~~ 380 (397)
++.+..++++|+.+|.+.+..+|
T Consensus 243 ~~~~~~~~~~G~~~m~~~~~~~~ 265 (265)
T PRK04201 243 HHLPSYGLIAGMAVMALSLVLLQ 265 (265)
T ss_pred chHHHHHHHHHHHHHHHHHHHhC
Confidence 46788999999999999887654
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| >COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
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| >PLN02159 Fe(2+) transport protein | Back alignment and domain information |
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| >TIGR00820 zip ZIP zinc/iron transport family | Back alignment and domain information |
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| >KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PRK04201 zinc transporter ZupT; Provisional | Back alignment and domain information |
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| >COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
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| >KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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| >PLN02159 Fe(2+) transport protein | Back alignment and domain information |
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| >TIGR00820 zip ZIP zinc/iron transport family | Back alignment and domain information |
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| >KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00