Citrus Sinensis ID: 016029

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSKEEVEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLGGIFAGATLDWLWLIGKGW
cEEEEHHHHHHHHHHHHHHcHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHEEccccccccccccccccccccEEEEEEHHcHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
cEEEEEEcHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHEEEHHHHHHHHHccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccEccccHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHEEEHHEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
mavcwllgngclfswnsmLTVVDYYVFLfpqyhpsriltlvyqPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLatsgkgglgtFIGICVISGafgvadanvqggmvgdLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAfvfpkipivkyyrnkaasegsKTVAADLAAGGIQMLSKEEVEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLsifpgflsedtgshslgGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFyftakygdqgWMIMLTSFLGLSNGYLTVCVLtaapkgykgpeqnaLGNLLVLFLLGGIFAGATLDWLWLIGKGW
MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSKEEVEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLGGIFAGATLDWLWLIGKGW
MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYIlffassllvlvldlaTSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSKEEVEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNalgnllvlfllggifagatlDWLWLIGKGW
**VCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKYYRNKAA*****TVAADLAAGGIQML****VEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLGGIFAGATLDWLWLIG***
MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKY*****************************VEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLGGIFAGATLDWLWLIGKGW
MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSKEEVEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLGGIFAGATLDWLWLIGKGW
MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKYYRNKAA****************************ERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLGGIFAGATLDWLWLIGKGW
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MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSKEEVEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLGGIFAGATLDWLWLIGKGW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query396 2.2.26 [Sep-21-2011]
Q9M0Y3418 Equilibrative nucleotide yes no 0.994 0.942 0.698 1e-165
Q944N8418 Equilibrative nucleotide no no 0.994 0.942 0.663 1e-155
Q9M0Y1419 Equilibrative nucleotide no no 0.992 0.937 0.657 1e-154
Q9M0Y2418 Equilibrative nucleotide no no 1.0 0.947 0.649 1e-152
Q9SR64417 Equilibrative nucleotide no no 1.0 0.949 0.639 1e-150
Q944P0417 Equilibrative nucleotide no no 0.987 0.937 0.601 1e-135
Q8VXY7450 Equilibrative nucleotide no no 0.939 0.826 0.322 4e-47
Q84XI3389 Equilibrative nucleotide no no 0.901 0.917 0.296 2e-42
A1L272518 Equilibrative nucleoside yes no 0.941 0.720 0.222 2e-13
Q14542456 Equilibrative nucleoside yes no 0.729 0.633 0.228 1e-09
>sp|Q9M0Y3|ENT3_ARATH Equilibrative nucleotide transporter 3 OS=Arabidopsis thaliana GN=ENT3 PE=1 SV=1 Back     alignment and function desciption
 Score =  580 bits (1494), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 276/395 (69%), Positives = 331/395 (83%), Gaps = 1/395 (0%)

Query: 1   MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKI 60
           M VC +LG G L SWNSMLT+ DYY  +FP YHPSR+LTLVYQPFAL T+ ILAYHE+KI
Sbjct: 20  MVVCCILGIGSLVSWNSMLTIADYYYKVFPDYHPSRVLTLVYQPFALGTILILAYHESKI 79

Query: 61  DTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGD 120
           +TR+R + GYILF  S+ L++VLDLAT G+GG+G +IG+C +  +FG+ADA VQGGM+GD
Sbjct: 80  NTRKRNLIGYILFTISTFLLIVLDLATKGRGGIGPYIGLCAVVASFGLADATVQGGMIGD 139

Query: 121 LSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCV 180
           LS M  EL+QSF+ GLA SGA+TSALRLITKAAFE + DG RKGA++F AIS+  E LCV
Sbjct: 140 LSLMCPELVQSFMGGLAVSGALTSALRLITKAAFEKTNDGPRKGAMMFLAISTCIELLCV 199

Query: 181 ILYAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSK-EEVEKCSERFSNKQLLL 239
            LYA+VFPK+PIVKYYR KAASEGSKTV+ADLAA GIQ  S   + +  ++R SNK+LL+
Sbjct: 200 FLYAYVFPKLPIVKYYRRKAASEGSKTVSADLAAAGIQNQSDLTDDDSKNQRLSNKELLI 259

Query: 240 QNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKF 299
           QNIDYA+++F+IY  TLSIFPGFL E+TG H LG WYA+VL+AMYN  DL+GRY PL+K+
Sbjct: 260 QNIDYAVNLFLIYVCTLSIFPGFLYENTGQHGLGDWYALVLVAMYNCWDLVGRYTPLVKW 319

Query: 300 FKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKG 359
            K+E+RK IT A LSR+LL+PAFYFTAKYGDQGWMIML S LGL+NG+LTVC++T APKG
Sbjct: 320 LKIENRKLITIAVLSRYLLIPAFYFTAKYGDQGWMIMLISVLGLTNGHLTVCIMTIAPKG 379

Query: 360 YKGPEQNALGNLLVLFLLGGIFAGATLDWLWLIGK 394
           YKGPEQNALGNLLV+FLLGGIFAG  LDWLWLIGK
Sbjct: 380 YKGPEQNALGNLLVIFLLGGIFAGVALDWLWLIGK 414
Nucleoside transporter that functions as a pyrimidine nucleoside carrier in all organs. Has high affinity for adenosine and uridine when expressed in a heterologous system (yeast). Mediates proton-dependent adenosine or uridine transport in Xenopus oocytes.
Arabidopsis thaliana (taxid: 3702)
>sp|Q944N8|ENT6_ARATH Equilibrative nucleotide transporter 6 OS=Arabidopsis thaliana GN=ENT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9M0Y1|ENT5_ARATH Equilibrative nucleotide transporter 5 OS=Arabidopsis thaliana GN=ENT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9M0Y2|ENT4_ARATH Equilibrative nucleotide transporter 4 OS=Arabidopsis thaliana GN=ENT4 PE=1 SV=1 Back     alignment and function description
>sp|Q9SR64|ENT2_ARATH Equilibrative nucleotide transporter 2 OS=Arabidopsis thaliana GN=ENT2 PE=2 SV=1 Back     alignment and function description
>sp|Q944P0|ENT7_ARATH Equilibrative nucleotide transporter 7 OS=Arabidopsis thaliana GN=ENT7 PE=1 SV=1 Back     alignment and function description
>sp|Q8VXY7|ENT1_ARATH Equilibrative nucleotide transporter 1 OS=Arabidopsis thaliana GN=ENT1 PE=1 SV=1 Back     alignment and function description
>sp|Q84XI3|ENT8_ARATH Equilibrative nucleotide transporter 8 OS=Arabidopsis thaliana GN=ETN8 PE=2 SV=1 Back     alignment and function description
>sp|A1L272|S29A4_DANRE Equilibrative nucleoside transporter 4 OS=Danio rerio GN=slc29a4 PE=2 SV=1 Back     alignment and function description
>sp|Q14542|S29A2_HUMAN Equilibrative nucleoside transporter 2 OS=Homo sapiens GN=SLC29A2 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
225447689417 PREDICTED: equilibrative nucleoside tran 0.994 0.944 0.804 0.0
224145557404 equilibrative nucleoside transporter [Po 0.994 0.975 0.828 0.0
356549978414 PREDICTED: equilibrative nucleoside tran 1.0 0.956 0.826 0.0
357453613414 Equilibrative nucleoside transporter [Me 0.994 0.951 0.818 1e-180
356544888 597 PREDICTED: equilibrative nucleoside tran 0.997 0.661 0.813 1e-179
356515218432 PREDICTED: equilibrative nucleoside tran 1.0 0.916 0.793 1e-175
334683129418 equilibrative nucleoside transporter 3 [ 1.0 0.947 0.787 1e-174
147766692401 hypothetical protein VITISV_013398 [Viti 0.989 0.977 0.761 1e-170
388508082383 unknown [Lotus japonicus] 0.934 0.966 0.811 1e-168
255553927406 nucleoside transporter, putative [Ricinu 0.967 0.943 0.766 1e-166
>gi|225447689|ref|XP_002276682.1| PREDICTED: equilibrative nucleoside transporter 4 [Vitis vinifera] gi|296081263|emb|CBI18007.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/394 (80%), Positives = 350/394 (88%)

Query: 3   VCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDT 62
           VCWLLGNGCLFSWNSMLT+ DYY +LFP YHPSR+LTLVYQPFAL+T+AIL Y EAKI+T
Sbjct: 24  VCWLLGNGCLFSWNSMLTIGDYYAYLFPDYHPSRVLTLVYQPFALVTIAILTYKEAKINT 83

Query: 63  RRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLS 122
           R R +FGY LFF S+LLVLVLDLATSGKGGLGTFIGICV+S AFG+ADA+VQGGMVGDLS
Sbjct: 84  RLRNLFGYTLFFISTLLVLVLDLATSGKGGLGTFIGICVLSAAFGLADAHVQGGMVGDLS 143

Query: 123 FMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCVIL 182
           FM  E +QSFLAGLAASGAITS LRLITKAAFENS+DG RKGA+LF +IS+FFE  CVIL
Sbjct: 144 FMLPEFMQSFLAGLAASGAITSGLRLITKAAFENSRDGFRKGAILFLSISTFFELFCVIL 203

Query: 183 YAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSKEEVEKCSERFSNKQLLLQNI 242
           YAFVFPK+PIVKY+R KAASEGSKTV+ADLAAGGIQ    E+  +  ER SNKQLLLQNI
Sbjct: 204 YAFVFPKLPIVKYFRAKAASEGSKTVSADLAAGGIQTTGAEKDPEQPERLSNKQLLLQNI 263

Query: 243 DYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKL 302
           DYAID+F+IY LTLSIFPGFLSEDTGSHSLG WY++VLIAMYN  DLIGRYIPL+K  KL
Sbjct: 264 DYAIDLFLIYILTLSIFPGFLSEDTGSHSLGSWYSLVLIAMYNGWDLIGRYIPLIKCIKL 323

Query: 303 ESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKG 362
           +SRK +    L+RFLL+PAFYFTAKYGDQGWMIMLTSFLGL+NGY TVCVLT APKGYKG
Sbjct: 324 KSRKGLMIGILTRFLLIPAFYFTAKYGDQGWMIMLTSFLGLTNGYFTVCVLTEAPKGYKG 383

Query: 363 PEQNALGNLLVLFLLGGIFAGATLDWLWLIGKGW 396
           PEQNALGN+LV FLLGG+FAG T DWLWLIGKGW
Sbjct: 384 PEQNALGNILVFFLLGGLFAGVTADWLWLIGKGW 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224145557|ref|XP_002325685.1| equilibrative nucleoside transporter [Populus trichocarpa] gi|222862560|gb|EEF00067.1| equilibrative nucleoside transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356549978|ref|XP_003543367.1| PREDICTED: equilibrative nucleoside transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|357453613|ref|XP_003597087.1| Equilibrative nucleoside transporter [Medicago truncatula] gi|357471483|ref|XP_003606026.1| Equilibrative nucleoside transporter [Medicago truncatula] gi|355486135|gb|AES67338.1| Equilibrative nucleoside transporter [Medicago truncatula] gi|355507081|gb|AES88223.1| Equilibrative nucleoside transporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|356544888|ref|XP_003540879.1| PREDICTED: equilibrative nucleoside transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356515218|ref|XP_003526298.1| PREDICTED: equilibrative nucleoside transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|334683129|emb|CBX87930.1| equilibrative nucleoside transporter 3 [Solanum tuberosum] Back     alignment and taxonomy information
>gi|147766692|emb|CAN71841.1| hypothetical protein VITISV_013398 [Vitis vinifera] Back     alignment and taxonomy information
>gi|388508082|gb|AFK42107.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|255553927|ref|XP_002518004.1| nucleoside transporter, putative [Ricinus communis] gi|223542986|gb|EEF44522.1| nucleoside transporter, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
TAIR|locus:2115733418 FUR1 "FUDR RESISTANT 1" [Arabi 0.994 0.942 0.632 1.4e-135
TAIR|locus:2115643419 AT4G05140 [Arabidopsis thalian 0.992 0.937 0.604 5.2e-129
TAIR|locus:2115718418 ENT6 "AT4G05110" [Arabidopsis 0.994 0.942 0.6 2.6e-127
TAIR|locus:2115753418 ENT4 "AT4G05130" [Arabidopsis 0.994 0.942 0.6 5.3e-127
TAIR|locus:2100068417 AT3G09990 [Arabidopsis thalian 1.0 0.949 0.581 7.8e-126
TAIR|locus:2200893417 ENT7 "AT1G61630" [Arabidopsis 0.984 0.935 0.549 5.3e-111
TAIR|locus:2016119450 ENT1 "equilibrative nucleotide 0.946 0.833 0.290 5.2e-42
TAIR|locus:2196070389 AT1G02630 [Arabidopsis thalian 0.482 0.491 0.279 3.7e-37
DICTYBASE|DDB_G0283439430 DDB_G0283439 "equilibrative nu 0.873 0.804 0.245 5.8e-23
DICTYBASE|DDB_G0281515522 DDB_G0281515 "equilibrative nu 0.507 0.385 0.245 5.3e-19
TAIR|locus:2115733 FUR1 "FUDR RESISTANT 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1328 (472.5 bits), Expect = 1.4e-135, P = 1.4e-135
 Identities = 250/395 (63%), Positives = 301/395 (76%)

Query:     1 MAVCWLLGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKI 60
             M VC +LG G L SWNSMLT+ DYY  +FP YHPSR+LTLVYQPFAL T+ ILAYHE+KI
Sbjct:    20 MVVCCILGIGSLVSWNSMLTIADYYYKVFPDYHPSRVLTLVYQPFALGTILILAYHESKI 79

Query:    61 DTRRRIIFGYIXXXXXXXXXXXXXXXTSGKGGLGTFIGICVISGAFGVADANVQGGMVGD 120
             +TR+R + GYI               T G+GG+G +IG+C +  +FG+ADA VQGGM+GD
Sbjct:    80 NTRKRNLIGYILFTISTFLLIVLDLATKGRGGIGPYIGLCAVVASFGLADATVQGGMIGD 139

Query:   121 LSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAISSFFEFLCV 180
             LS M  EL+QSF+ GLA SGA+TSALRLITKAAFE + DG RKGA++F AIS+  E LCV
Sbjct:   140 LSLMCPELVQSFMGGLAVSGALTSALRLITKAAFEKTNDGPRKGAMMFLAISTCIELLCV 199

Query:   181 ILYAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSK-EEVEKCSERFSNKQLLL 239
              LYA+VFPK+PIVKYYR KAASEGSKTV+ADLAA GIQ  S   + +  ++R SNK+LL+
Sbjct:   200 FLYAYVFPKLPIVKYYRRKAASEGSKTVSADLAAAGIQNQSDLTDDDSKNQRLSNKELLI 259

Query:   240 QNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKF 299
             QNIDYA+++F+IY  TLSIFPGFL E+TG H LG WYA+VL+AMYN  DL+GRY PL+K+
Sbjct:   260 QNIDYAVNLFLIYVCTLSIFPGFLYENTGQHGLGDWYALVLVAMYNCWDLVGRYTPLVKW 319

Query:   300 FKLESRKYITAATLSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKG 359
              K+E+RK IT A LSR+LL+PAFYFTAKYGDQGWMIML S LGL+NG+LTVC++T APKG
Sbjct:   320 LKIENRKLITIAVLSRYLLIPAFYFTAKYGDQGWMIMLISVLGLTNGHLTVCIMTIAPKG 379

Query:   360 YKGPEQNXXXXXXXXXXXXXXXXXXXXDWLWLIGK 394
             YKGPEQN                    DWLWLIGK
Sbjct:   380 YKGPEQNALGNLLVIFLLGGIFAGVALDWLWLIGK 414
GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA;ISS;IMP
GO:0006810 "transport" evidence=IEA
GO:0015864 "pyrimidine nucleoside transport" evidence=IMP
GO:0016021 "integral to membrane" evidence=IEA
GO:0015858 "nucleoside transport" evidence=IMP
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2115643 AT4G05140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115718 ENT6 "AT4G05110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115753 ENT4 "AT4G05130" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100068 AT3G09990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200893 ENT7 "AT1G61630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016119 ENT1 "equilibrative nucleotide transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196070 AT1G02630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283439 DDB_G0283439 "equilibrative nucleoside transporter (ENT) family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0281515 DDB_G0281515 "equilibrative nucleoside transporter (ENT) family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M0Y3ENT3_ARATHNo assigned EC number0.69870.99490.9425yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
TIGR00939437 TIGR00939, 2a57, Equilibrative Nucleoside Transpor 9e-34
pfam01733305 pfam01733, Nucleoside_tran, Nucleoside transporter 1e-25
>gnl|CDD|233199 TIGR00939, 2a57, Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information 
 Score =  130 bits (328), Expect = 9e-34
 Identities = 96/432 (22%), Positives = 167/432 (38%), Gaps = 50/432 (11%)

Query: 6   LLGNGCLFSWNSMLTVVDYYVFLFP--QYHPSRILTL---------VYQPFALITLAILA 54
           +LG G L  WN+ +T   Y++  +   Q  P  I +           Y   + +   +  
Sbjct: 3   MLGVGVLLPWNAFITAPQYFIEYYKYAQNIPEAIPSSSKMWKHFNTYYTLASQLPSLLFN 62

Query: 55  YHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGL---GTFIGICVISGAFGVADA 111
                +  R  +    +L     LLV+V+ +    K      G F+             A
Sbjct: 63  SLNLFLIFRIPVTVR-LLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMA 121

Query: 112 NVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFAI 171
            +QG + G      S    + ++G   +G +TS   ++ KA   N   GL+K AL +F  
Sbjct: 122 LLQGSLFGLAGVFPSTYSSAVMSGQGLAGVLTSLAMILVKA-SGNDSHGLKKSALGYFGT 180

Query: 172 SSFFEFLCVILYAFVFPKIPIVKYYRNKAASEGSKTVA----------ADLAAGGIQMLS 221
               + +C++ Y  + PK+P  +YY  K   +G+               +    G    S
Sbjct: 181 PCVVQLICIVCY-LLLPKLPFARYYLQKKLDKGAGEDETKGELRSKAEQNGIPHGGDQPS 239

Query: 222 KEEV---EKCSERFSNKQL--------LLQNIDY-AIDMFVIYTLTLSIFPGFLSEDT-- 267
              V   EK  E     Q         +   +   A  +  ++T+TLS+FP   +  T  
Sbjct: 240 PTLVLDWEKEPESPDEPQKPLKTSVWVVFTKVWLLAFSVVFVFTVTLSVFPAITTAVTSS 299

Query: 268 GSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAF----- 322
           G      +Y ++   ++N+ D +GR +     +  E  +++   +  R L +P F     
Sbjct: 300 GLGLSNWFYPIICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNY 359

Query: 323 ----YFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLG 378
                    +    + I+L    G SNGYL    +  AP+     E+   G L+V+FLL 
Sbjct: 360 PQRSRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLV 419

Query: 379 GIFAGATLDWLW 390
           G+  GA L +L+
Sbjct: 420 GLALGAVLSFLF 431

[Transport and binding proteins, Nucleosides, purines and pyrimidines]. Length = 437
>gnl|CDD|216670 pfam01733, Nucleoside_tran, Nucleoside transporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 396
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 100.0
KOG1479406 consensus Nucleoside transporter [Nucleotide trans 100.0
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 100.0
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 99.95
KOG3880409 consensus Predicted small molecule transporter inv 99.82
TIGR00881379 2A0104 phosphoglycerate transporter family protein 98.72
TIGR00893399 2A0114 d-galactonate transporter. 98.69
TIGR00895398 2A0115 benzoate transport. 98.5
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.4
TIGR00891405 2A0112 putative sialic acid transporter. 98.32
TIGR00900365 2A0121 H+ Antiporter protein. 98.3
KOG4255439 consensus Uncharacterized conserved protein [Funct 98.27
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 98.21
TIGR00898505 2A0119 cation transport protein. 98.1
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.1
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 98.09
PRK11663434 regulatory protein UhpC; Provisional 98.07
TIGR00892455 2A0113 monocarboxylate transporter 1. 98.06
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.05
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 98.03
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 98.01
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 97.98
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 97.95
PRK10489417 enterobactin exporter EntS; Provisional 97.94
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 97.92
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 97.91
PRK03545390 putative arabinose transporter; Provisional 97.86
PRK10213394 nepI ribonucleoside transporter; Reviewed 97.82
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 97.81
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 97.8
PRK10642490 proline/glycine betaine transporter; Provisional 97.77
PRK12382392 putative transporter; Provisional 97.75
PRK03699394 putative transporter; Provisional 97.75
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 97.7
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 97.64
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 97.6
PRK05122399 major facilitator superfamily transporter; Provisi 97.59
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 97.54
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 97.53
PRK14995495 methyl viologen resistance protein SmvA; Provision 97.52
PRK10133438 L-fucose transporter; Provisional 97.51
PRK15402406 multidrug efflux system translocase MdfA; Provisio 97.49
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 97.48
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 97.46
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 97.46
PRK11902402 ampG muropeptide transporter; Reviewed 97.44
PRK10504471 putative transporter; Provisional 97.42
PRK11652394 emrD multidrug resistance protein D; Provisional 97.41
PLN00028476 nitrate transmembrane transporter; Provisional 97.41
PRK09874408 drug efflux system protein MdtG; Provisional 97.37
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 97.34
TIGR00896355 CynX cyanate transporter. This family of proteins 97.29
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 97.28
PRK11043401 putative transporter; Provisional 97.28
TIGR00901356 2A0125 AmpG-related permease. 97.27
PRK10077479 xylE D-xylose transporter XylE; Provisional 97.25
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 97.21
PRK10473392 multidrug efflux system protein MdtL; Provisional 97.18
PRK12307426 putative sialic acid transporter; Provisional 97.16
PRK10091382 MFS transport protein AraJ; Provisional 97.15
TIGR00902382 2A0127 phenyl proprionate permease family protein. 97.12
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 97.1
TIGR01272310 gluP glucose/galactose transporter. Disruption of 97.1
PRK03633381 putative MFS family transporter protein; Provision 97.06
COG0738422 FucP Fucose permease [Carbohydrate transport and m 97.05
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 96.9
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 96.82
PRK15011393 sugar efflux transporter B; Provisional 96.82
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 96.77
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 96.71
PRK09952438 shikimate transporter; Provisional 96.7
KOG2532466 consensus Permease of the major facilitator superf 96.61
PRK09705393 cynX putative cyanate transporter; Provisional 96.57
PRK09669444 putative symporter YagG; Provisional 96.54
TIGR00897402 2A0118 polyol permease family. This family of prot 96.53
PRK11646400 multidrug resistance protein MdtH; Provisional 96.53
PRK03893496 putative sialic acid transporter; Provisional 96.47
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 96.41
KOG2533495 consensus Permease of the major facilitator superf 96.36
PF13347428 MFS_2: MFS/sugar transport protein 96.3
KOG0569485 consensus Permease of the major facilitator superf 96.28
PRK11010491 ampG muropeptide transporter; Validated 96.24
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 96.2
PRK15403413 multidrug efflux system protein MdtM; Provisional 96.12
PRK10054395 putative transporter; Provisional 95.98
PRK09528420 lacY galactoside permease; Reviewed 95.97
PRK11195393 lysophospholipid transporter LplT; Provisional 95.88
PRK09848448 glucuronide transporter; Provisional 95.48
PRK10406432 alpha-ketoglutarate transporter; Provisional 95.48
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 95.23
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 95.12
PRK15075434 citrate-proton symporter; Provisional 95.09
TIGR00805 633 oat sodium-independent organic anion transporter. 94.76
PRK10207489 dipeptide/tripeptide permease B; Provisional 94.69
PRK12382 392 putative transporter; Provisional 94.67
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 94.49
PRK11462460 putative transporter; Provisional 94.46
KOG3764464 consensus Vesicular amine transporter [Intracellul 94.31
PF13347428 MFS_2: MFS/sugar transport protein 94.23
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 94.19
PRK10429473 melibiose:sodium symporter; Provisional 94.1
TIGR00889418 2A0110 nucleoside transporter. This family of prot 93.87
PRK09848448 glucuronide transporter; Provisional 93.82
TIGR00895 398 2A0115 benzoate transport. 93.47
PRK09669444 putative symporter YagG; Provisional 93.39
PRK11646 400 multidrug resistance protein MdtH; Provisional 93.3
TIGR00788468 fbt folate/biopterin transporter. The only functio 93.21
PRK05122 399 major facilitator superfamily transporter; Provisi 93.12
TIGR00893 399 2A0114 d-galactonate transporter. 92.83
PLN00028476 nitrate transmembrane transporter; Provisional 92.69
TIGR00900 365 2A0121 H+ Antiporter protein. 92.67
TIGR00880141 2_A_01_02 Multidrug resistance protein. 92.63
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 91.81
PRK10213 394 nepI ribonucleoside transporter; Reviewed 91.57
TIGR00898 505 2A0119 cation transport protein. 91.56
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 91.51
KOG2325488 consensus Predicted transporter/transmembrane prot 91.4
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 91.38
PRK10429473 melibiose:sodium symporter; Provisional 91.36
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 90.81
PRK11462460 putative transporter; Provisional 90.64
PRK10504471 putative transporter; Provisional 90.63
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 90.61
PRK11663 434 regulatory protein UhpC; Provisional 90.55
PRK09874 408 drug efflux system protein MdtG; Provisional 90.41
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 89.81
TIGR00891 405 2A0112 putative sialic acid transporter. 89.68
PRK09584500 tppB putative tripeptide transporter permease; Rev 89.62
PRK10489 417 enterobactin exporter EntS; Provisional 89.32
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 89.23
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 88.7
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 88.5
PRK10054 395 putative transporter; Provisional 88.34
KOG0569 485 consensus Permease of the major facilitator superf 87.72
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 87.68
PRK03699 394 putative transporter; Provisional 87.5
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 86.8
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 86.63
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 86.13
PRK03545 390 putative arabinose transporter; Provisional 85.96
PRK10091 382 MFS transport protein AraJ; Provisional 85.89
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 85.88
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 85.87
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 85.74
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 85.7
PRK10473 392 multidrug efflux system protein MdtL; Provisional 85.58
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 85.07
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 85.06
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 84.98
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 84.94
TIGR00880141 2_A_01_02 Multidrug resistance protein. 84.76
TIGR00892455 2A0113 monocarboxylate transporter 1. 83.91
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 83.29
PRK15403 413 multidrug efflux system protein MdtM; Provisional 82.96
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 82.19
PRK10642490 proline/glycine betaine transporter; Provisional 81.49
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 80.79
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information 
Probab=100.00  E-value=9e-78  Score=605.78  Aligned_cols=385  Identities=24%  Similarity=0.429  Sum_probs=320.0

Q ss_pred             eeehhhhhhhhhhHhhchHHHHhhhcCCC--C-------------CcceeehhhhHHHHHHHHHHHHhhccCCcchhhHH
Q 016029            4 CWLLGNGCLFSWNSMLTVVDYYVFLFPQY--H-------------PSRILTLVYQPFALITLAILAYHEAKIDTRRRIIF   68 (396)
Q Consensus         4 F~~lGi~~LlpwN~~ita~~Yf~~~~~~~--~-------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~   68 (396)
                      |+++|+|+|+|||+|+||.|||++||+++  +             +++++++++++++++..+++.+.++|+|.+.|+..
T Consensus         1 f~llG~~~L~pWN~fitA~~Yf~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~   80 (437)
T TIGR00939         1 FFMLGVGVLLPWNAFITAPQYFIEYYKYAQNIPEAIPSSSKMWKHFNTYYTLASQLPSLLFNSLNLFLIFRIPVTVRLLG   80 (437)
T ss_pred             CEEEeeeccchhHHHhhHHHHHHHHhccCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhHH
Confidence            78999999999999999999999998753  1             34556668888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCchHHHHHHHHHHHHhhhhhhhccchhhccccCCHHHHHHHHhhhhhHhHHHHHHHH
Q 016029           69 GYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGMVGDLSFMTSELIQSFLAGLAASGAITSALRL  148 (396)
Q Consensus        69 ~~~~~~i~~~~~~~i~~~~~~~~~~~~f~~~l~~~~~~g~~~~~~q~s~~~la~~~p~~~~~a~~~G~g~aGi~~s~~~i  148 (396)
                      +++++++..++..++...  +.+...+|+++|+++++.|+++|+.|++.+|+++.+|++|+|++|+|||+||++++++|+
T Consensus        81 ~lv~~~~~~~~~~~l~~~--~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~~fp~~~~~a~~~G~g~aGv~~s~~~i  158 (437)
T TIGR00939        81 GLVILLVVVILVMVLVKV--QTSETGFFVTTMASVVIINSGMALLQGSLFGLAGVFPSTYSSAVMSGQGLAGVLTSLAMI  158 (437)
T ss_pred             HHHHHHHHHHHHhheeee--cCCcchHHHHHHHHHHHHHhhhhhhcccchhhcccCCHHHHHHHHhcchhHHHHHHHHHH
Confidence            988776665554333211  122346899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCccccchhhhHHhHHHHHHHHHHHHHHHHHcCCChHHHHHHHhhhccC--Cccc-----cchh-hhc--cCc
Q 016029          149 ITKAAFENSKDGLRKGALLFFAISSFFEFLCVILYAFVFPKIPIVKYYRNKAASEG--SKTV-----AADL-AAG--GIQ  218 (396)
Q Consensus       149 i~~~~~~~~~~~~~~~a~~yF~ia~~~~~~~~~~~~~~l~k~~~~~~~~~~~~~~~--~~~~-----~~~~-~~~--~~~  218 (396)
                      +++++.+|+. ++++++++||+++++++++|+++|. .++|+|++|||.++..+++  +++.     ++++ +++  +.+
T Consensus       159 i~~a~~~~~~-~~~~~a~~YF~~a~~v~l~~i~~~~-~l~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (437)
T TIGR00939       159 LVKASGNDSH-GLKKSALGYFGTPCVVQLICIVCYL-LLPKLPFARYYLQKKLDKGAGEDETKGELRSKAEQNGIPHGGD  236 (437)
T ss_pred             HHHHhcCCcc-chhhhhhhHHHHHHHHHHHHHHHHH-HHhcCHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence            9999877755 7899999999999999999999999 9999999999976543210  0000     0000 000  000


Q ss_pred             c-C----------cc-cccccccccccHHHHHHHHHHHHHHHHHHhhhhccccCceEeeccCCCC-CCc-hHHHHHHHHH
Q 016029          219 M-L----------SK-EEVEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLSIFPGFLSEDTGSHS-LGG-WYAVVLIAMY  284 (396)
Q Consensus       219 ~-~----------~~-~~~~~~~~~~~~~~v~k~i~~~~~~~~l~f~vTl~vFP~i~~~~~~~~~-~~~-w~~~~~~~~f  284 (396)
                      + +          +| +++++++++.++++++||+|+++++++++|++||++|||+++++++++. .++ |++++++++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~f  316 (437)
T TIGR00939       237 QPSPTLVLDWEKEPESPDEPQKPLKTSVWVVFTKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLF  316 (437)
T ss_pred             cccccccccccccccCCccchhcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHH
Confidence            0 0          00 1112234467899999999999999999999999999999988766553 345 5899999999


Q ss_pred             HHhhhhhhhhccccccccCCcchHHHHHHHHHHHHHHHHhhccc---------CCchHHHHHHHHHhhccccccceeeec
Q 016029          285 NVGDLIGRYIPLLKFFKLESRKYITAATLSRFLLVPAFYFTAKY---------GDQGWMIMLTSFLGLSNGYLTVCVLTA  355 (396)
Q Consensus       285 n~gD~iGR~l~~~~~~~~~~~~~l~i~sl~R~~fiplfll~~~~---------~~d~~~~i~~~lfgltnGyl~t~~mi~  355 (396)
                      |+||++||.++.+..++.+++|++++++++|++|||+|++||+.         ++|+++++++++||+||||++|++|++
T Consensus       317 NvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~  396 (437)
T TIGR00939       317 NLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCL  396 (437)
T ss_pred             HHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHh
Confidence            99999999999877665445558999999999999999999964         589999999999999999999999999


Q ss_pred             cCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 016029          356 APKGYKGPEQNALGNLLVLFLLGGIFAGATLDWLWLI  392 (396)
Q Consensus       356 ~p~~v~~~e~e~ag~~~~~~l~~Gl~~Gs~~s~~~~~  392 (396)
                      ||++++++|||.||.+|++++++|+++||.+|+++..
T Consensus       397 ~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~~  433 (437)
T TIGR00939       397 APRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFVA  433 (437)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998864

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>KOG4255 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 53.7 bits (128), Expect = 7e-08
 Identities = 70/441 (15%), Positives = 121/441 (27%), Gaps = 135/441 (30%)

Query: 3   VCWL-LGNGCLFSWNSMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKID 61
           + WL L N C    NS  TV++    L  Q  P+       +      +  L  H  +  
Sbjct: 184 IFWLNLKN-C----NSPETVLEMLQKLLYQIDPN----WTSRSDHSSNI-KLRIHSIQ-A 232

Query: 62  TRRRIIFGYILFFASSLLVL--VLDLATSGKGGLGTFIGIC---VISGAFGVADANVQGG 116
             RR++      + + LLVL  V +           F   C   + +    V D  +   
Sbjct: 233 ELRRLLKSKP--YENCLLVLLNVQNAKA-----WNAFNLSCKILLTTRFKQVTDF-LSAA 284

Query: 117 MVGDLS-------FMTSELIQSFLAGL----------AASG-----AITSALRLITKAAF 154
               +S           E+    L  L            +      +I +       A +
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 155 ENSK----DGLRKGALLFFAISSFFEFLCVI----LYA--FVFP---KIPIVKYYRNKAA 201
           +N K    D L         I S    L       ++    VFP    IP          
Sbjct: 345 DNWKHVNCDKLTT------IIESSLNVLEPAEYRKMFDRLSVFPPSAHIP---------- 388

Query: 202 SEGSKTVAADLAAGGIQML----SKEEVEKCSERFSNKQLLLQNIDYAIDMFVIYTLTLS 257
              +           + ++     K +V     +     L+ +    +     I ++ L 
Sbjct: 389 ---TIL---------LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST--ISIPSIYLE 434

Query: 258 IFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKLESRKYI--------- 308
           +    L  +   H         ++  YN    I +             +Y          
Sbjct: 435 LKVK-LENEYALHR-------SIVDHYN----IPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 309 TAATLSRFLLVPAFYFTAKYGDQGWM---IMLTSFLGLSNGYL--TVCVLTAAPKGYKG- 362
                 R  L    +      D  ++   I   S    ++G +  T+  L    K YK  
Sbjct: 483 NIEHPERMTLFRMVFL-----DFRFLEQKIRHDSTAWNASGSILNTLQQL----KFYKPY 533

Query: 363 -----PEQNALGNLLVLFLLG 378
                P+   L N ++ FL  
Sbjct: 534 ICDNDPKYERLVNAILDFLPK 554

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 98.76
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 98.3
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 97.56
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 97.42
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 97.41
2xut_A524 Proton/peptide symporter family protein; transport 96.82
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 95.92
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 94.35
2xut_A 524 Proton/peptide symporter family protein; transport 92.2
2cfq_A417 Lactose permease; transport, transport mechanism, 90.31
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 86.18
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 85.61
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
Probab=98.76  E-value=5.4e-07  Score=88.84  Aligned_cols=344  Identities=12%  Similarity=0.023  Sum_probs=165.3

Q ss_pred             HhhchHHHHhhhcCCCCCcceeehhhhHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHHHHHHHHhhh-ccCCCCCchH
Q 016029           17 SMLTVVDYYVFLFPQYHPSRILTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDL-ATSGKGGLGT   95 (396)
Q Consensus        17 ~~ita~~Yf~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~~~~~~i~~~~~~~i~~-~~~~~~~~~~   95 (396)
                      .+....+++.+++-+.....++...+.+...+...+...+.+|.+.+.-+..+..+..+..++....+. .++       
T Consensus        46 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-------  118 (451)
T 1pw4_A           46 NFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSS-------  118 (451)
T ss_dssp             SHHHHHHHTTSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSS-------
T ss_pred             HHHHHHHHHHHHhccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhcccc-------
Confidence            333444555544411112233444466666666777778888888766555666666666555443221 211       


Q ss_pred             HHHHHHHHHHHhhhhhhhccchhhcccc-CCHH----HHHHHHhhhhhHhHHHHHHHHHHHhhccCCccccchhhhHHhH
Q 016029           96 FIGICVISGAFGVADANVQGGMVGDLSF-MTSE----LIQSFLAGLAASGAITSALRLITKAAFENSKDGLRKGALLFFA  170 (396)
Q Consensus        96 f~~~l~~~~~~g~~~~~~q~s~~~la~~-~p~~----~~~a~~~G~g~aGi~~s~~~ii~~~~~~~~~~~~~~~a~~yF~  170 (396)
                      ++..++.-++.|++.+.......++.+. +|++    .++....+.+++++++..+.-......+    +-+  . .|..
T Consensus       119 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g----~w~--~-~f~~  191 (451)
T 1pw4_A          119 IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN----DWH--A-ALYM  191 (451)
T ss_dssp             SSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTC----CST--T-CTHH
T ss_pred             HHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cHH--H-HHHH
Confidence            4445556678899999888888888655 4533    3444556677777666555432221111    122  1 2333


Q ss_pred             HHHHHHHHHHHHHHHHcCCChHHHHHHHhhhccCCccccchhhhccCccCccccccccccccc-HHHHH--HHHHHHHHH
Q 016029          171 ISSFFEFLCVILYAFVFPKIPIVKYYRNKAASEGSKTVAADLAAGGIQMLSKEEVEKCSERFS-NKQLL--LQNIDYAID  247 (396)
Q Consensus       171 ia~~~~~~~~~~~~~~l~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~--k~i~~~~~~  247 (396)
                      .+.+..+..+..+. .+++.|..     ++.+++++..+++..     +.+++++++...+.. .++++  |..|...+.
T Consensus       192 ~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (451)
T 1pw4_A          192 PAFCAILVALFAFA-MMRDTPQS-----CGLPPIEEYKNDYPD-----DYNEKAEQELTAKQIFMQYVLPNKLLWYIAIA  260 (451)
T ss_dssp             HHHHHHHHHHHHHH-HCCCSSTT-----TCCCSCTTTCCC------------------CCTHHHHHHTSSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-hccCCHhh-----cCCCChhhhcccccc-----cchhhhhcccccccchHHHHHcCHHHHHHHHH
Confidence            33333333444444 45443321     000000000000000     000000000001100 12222  234444444


Q ss_pred             HHHHhhhh---ccccCceEeeccCCCCCCchHHHHHHHHHHHhhhhhhhhcccccccc-CCcchHHHHHHHHHHHHHHHH
Q 016029          248 MFVIYTLT---LSIFPGFLSEDTGSHSLGGWYAVVLIAMYNVGDLIGRYIPLLKFFKL-ESRKYITAATLSRFLLVPAFY  323 (396)
Q Consensus       248 ~~l~f~vT---l~vFP~i~~~~~~~~~~~~w~~~~~~~~fn~gD~iGR~l~~~~~~~~-~~~~~l~i~sl~R~~fiplfl  323 (396)
                      .++..+..   ....|-...   +....++...-.....+.++..+|+.+.....-+. .++|........=...+-+.+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (451)
T 1pw4_A          261 NVFVYLLRYGILDWSPTYLK---EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV  337 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHBT---TBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Confidence            44333322   223333321   11111233344567788899999998876531111 133333222211111112222


Q ss_pred             hhccc-CCchHHHHHHHHHhhccccccceeeeccCCCCCchhhhhhhhHHHHHHHH-HHHHHHHHHH
Q 016029          324 FTAKY-GDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLG-GIFAGATLDW  388 (396)
Q Consensus       324 l~~~~-~~d~~~~i~~~lfgltnGyl~t~~mi~~p~~v~~~e~e~ag~~~~~~l~~-Gl~~Gs~~s~  388 (396)
                      +.... .+.+...+..++.|+..|........+..+..++++|..+-.+....-.+ |..+|..+.=
T Consensus       338 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g  404 (451)
T 1pw4_A          338 YWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG  404 (451)
T ss_dssp             TTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222 24445556678888877777666666777778888888888888777777 8777776543
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 98.64
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 97.57
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 93.54
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 86.92
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=98.64  E-value=1.2e-06  Score=83.46  Aligned_cols=106  Identities=14%  Similarity=0.032  Sum_probs=65.3

Q ss_pred             eehhhhHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHHHHHHHHhhhccCCCCCchHHHHHHHHHHHHhhhhhhhccch
Q 016029           38 LTLVYQPFALITLAILAYHEAKIDTRRRIIFGYILFFASSLLVLVLDLATSGKGGLGTFIGICVISGAFGVADANVQGGM  117 (396)
Q Consensus        38 ~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~~~~~~i~~~~~~~i~~~~~~~~~~~~f~~~l~~~~~~g~~~~~~q~s~  117 (396)
                      ....+.+...++..+...+.+|...|.-+..+.++..+..++....+...      ..++..++.-++.|++.|......
T Consensus        64 ~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~  137 (447)
T d1pw4a_          64 ALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT------SSIAVMFVLLFLCGWFQGMGWPPC  137 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHH------SSSSHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhh------hhHHHHHHHHHHHHHhhhhhhhHH
Confidence            33445666666677777888998877766677777766666554443221      114444555567788888777777


Q ss_pred             hhccc-cCCHHH----HHHHHhhhhhHhHHHHHHHHH
Q 016029          118 VGDLS-FMTSEL----IQSFLAGLAASGAITSALRLI  149 (396)
Q Consensus       118 ~~la~-~~p~~~----~~a~~~G~g~aGi~~s~~~ii  149 (396)
                      .++.+ .+|++.    ++....+.+++++++......
T Consensus       138 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~  174 (447)
T d1pw4a_         138 GRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLL  174 (447)
T ss_dssp             HHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             HHHHHHHHHhhcccccccccccccchhhhhhhhhhhh
Confidence            77644 466543    344456777777776654443
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure