Citrus Sinensis ID: 016036

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
cccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHcccccccccccccccccEEEEEEEcccccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEcccccEEcHHHHHHHHHcccccccEEEEEEEccccccccccccEEccccccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHHcccEEEccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHcccHHHHHHHHHcc
cccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHcccccHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEccccccccccccEEEcccEEccccccccccccccccEEEEcHHHHHHHHHccHHHHHHcHccccHHHHHHcccEEEEccccccccccccccEEEcccccEEEEEEcccccccccHHHHHHHHHHHccccccEEEEEc
msfkstggefasrnlipRKWALFLCACsfcagmsftnrmwmmpeskgvariskteeienpelavkhesnnntEKLAMVEQAIQSQDKRLDGLKTKITAVraerdsvslshpvkgtsnisgsmlKRKYFMVIGINTafssrkrrdsvratwmpqgekRKMLEEAKGIIIRFVIghsatsggildKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLaahrtkprvyvgcmksgpvlarkgvkyyepeywkfgeignkyfRHATGQLYALSKDLATYISINQHLLHKyanedvslgswfigldvehvddrrlccgtppdcewkaqlgktcvatfdwrcsgickSVERIKEVHELCGEGEDTLWRASF
msfkstggefasrnlipRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIEnpelavkhesnnnTEKLAMVEQAIQSQDKRLDGLKTKITavraerdsvslshpvkgtsnisgsmlkrKYFMVIGINtafssrkrrdsvratwmpqgekrkMLEEAKGIIIRFvighsatsGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTlaahrtkprvyvgcmksgpvlarkgvKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGtppdcewkaqlgKTCVATFDWRCSGICKSVERIKEVhelcgegedtlwrasf
MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
************RNLIPRKWALFLCACSFCAGMSFTNRMWMM*******************************************************************************MLKRKYFMVIGINTAFS*********************LEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLW****
*******************WALFLCACSFCAGMSFTNRMW***********************************AMVEQAIQSQDKRLDGLKTKITA*****************************FMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
********EFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELAVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFS*********ATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
**************LIPRKWALFLCACSFCAGMSFTNRMWMMP*******************AVKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERD*******************KRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENPELAVKHESNNNTEKxxxxxxxxxxxxxxxxxxxxxITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query396 2.2.26 [Sep-21-2011]
A8MRC7407 Probable beta-1,3-galacto yes no 0.982 0.955 0.653 1e-161
Q9ZV71409 Probable beta-1,3-galacto no no 1.0 0.968 0.635 1e-152
Q9SAA4384 Probable beta-1,3-galacto no no 0.962 0.992 0.654 1e-149
Q8LEJ9407 Probable beta-1,3-galacto no no 0.972 0.945 0.635 1e-146
Q9MAP8399 Probable beta-1,3-galacto no no 0.962 0.954 0.575 1e-134
Q6NQB7393 Beta-1,3-galactosyltransf no no 0.944 0.951 0.605 1e-133
Q9LM60398 Probable beta-1,3-galacto no no 0.941 0.937 0.548 1e-124
Q9C809395 Probable beta-1,3-galacto no no 0.939 0.941 0.554 1e-121
Q94F27338 Probable beta-1,3-galacto no no 0.646 0.757 0.454 7e-63
Q5XEZ1346 Probable beta-1,3-galacto no no 0.568 0.650 0.495 9e-58
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1 Back     alignment and function desciption
 Score =  567 bits (1461), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 262/401 (65%), Positives = 318/401 (79%), Gaps = 12/401 (2%)

Query: 8   GEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIEN 59
           GE++SR+ + RKW + LC  SFC GM FTNRMW +PESKG++  S TE        E  N
Sbjct: 7   GEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCN 66

Query: 60  PELAVKHESNNNTEKL----AMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGT 115
           P+   + E   + + L    A    A+Q+ DK +  L+ ++ A R+ ++S+    P+   
Sbjct: 67  PKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDD 126

Query: 116 SNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHS 175
                   +R++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHS
Sbjct: 127 MGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHS 186

Query: 176 ATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDV 235
           AT+GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDV
Sbjct: 187 ATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDV 246

Query: 236 HVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQ 295
           HVN+ATLG TL  HR KPRVY+GCMKSGPVL++KGV+Y+EPEYWKFGE GNKYFRHATGQ
Sbjct: 247 HVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQ 306

Query: 296 LYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQL 355
           LYA+S+DLA+YISINQH+LHKYANEDVSLG+WFIG+DV+H+DDRRLCCGTPPDCEWKAQ 
Sbjct: 307 LYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQA 366

Query: 356 GKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF 396
           G  CVA+FDW CSGIC+S +RIKEVH  CGEGE  LW A+F
Sbjct: 367 GNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2 Back     alignment and function description
>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1 Back     alignment and function description
>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1 Back     alignment and function description
>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1 Back     alignment and function description
>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1 Back     alignment and function description
>sp|Q5XEZ1|B3GT9_ARATH Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
359494044405 PREDICTED: probable beta-1,3-galactosylt 1.0 0.977 0.679 1e-167
359494046411 PREDICTED: probable beta-1,3-galactosylt 1.0 0.963 0.669 1e-166
224128958405 predicted protein [Populus trichocarpa] 0.997 0.975 0.677 1e-165
356542818406 PREDICTED: probable beta-1,3-galactosylt 0.992 0.967 0.667 1e-159
145323746407 putative beta-1,3-galactosyltransferase 0.982 0.955 0.653 1e-159
297848780407 galactosyltransferase family protein [Ar 0.979 0.953 0.657 1e-159
15220440404 putative beta-1,3-galactosyltransferase 0.982 0.962 0.658 1e-159
225447013407 PREDICTED: probable beta-1,3-galactosylt 0.997 0.970 0.683 1e-159
255554873388 Beta-1,3-galactosyltransferase sqv-2, pu 0.962 0.981 0.694 1e-158
356517642407 PREDICTED: probable beta-1,3-galactosylt 0.994 0.968 0.665 1e-158
>gi|359494044|ref|XP_002279814.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 1 [Vitis vinifera] gi|297737446|emb|CBI26647.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 275/405 (67%), Positives = 332/405 (81%), Gaps = 9/405 (2%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIENP 60
           MS+KS G E +S++++ RKW L  C   FCAGM F++RMW MPE+KG++R ++TE+ E  
Sbjct: 1   MSWKSRGIEPSSKSVVSRKWTLLFCIGCFCAGMLFSDRMWTMPEAKGISRTTRTEDEELK 60

Query: 61  ELA---------VKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHP 111
            ++         VKH+S +   +++    AIQ+ DK +  L+ ++ A RA ++S+    P
Sbjct: 61  LVSEGCAPTTKDVKHKSKDILGEVSRTHYAIQTLDKTISNLEMELAAARAAQESILNGSP 120

Query: 112 VKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFV 171
           +     I+ S  +RKY MVIGINTAFSSRKRRDSVRATWMPQG+KRK LEE KGII+RFV
Sbjct: 121 ITEDLPITKSSGRRKYLMVIGINTAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIIVRFV 180

Query: 172 IGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKV 231
           IGHSATSGGILD+AI+AE++ HGDFLRLEH+EGYLELSAKTK YFATAV+MWDA+FY+KV
Sbjct: 181 IGHSATSGGILDRAIEAEDRRHGDFLRLEHVEGYLELSAKTKAYFATAVAMWDADFYVKV 240

Query: 232 DDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRH 291
           DDDVHVN+ATLG TLA HR+KPR+Y+GCMKSGPVLA+KGV+Y+EPEYWKFGE GNKYFRH
Sbjct: 241 DDDVHVNIATLGATLARHRSKPRIYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRH 300

Query: 292 ATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEW 351
           ATGQLYA+SKDLATYISINQH+LHKYANEDVSLGSWFIGLD EH+DDRRLCCGTPPDCEW
Sbjct: 301 ATGQLYAISKDLATYISINQHVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEW 360

Query: 352 KAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF 396
           KAQ G  CVA+FDW CSGIC+S ERI+EVH  CGEGE+ +W A F
Sbjct: 361 KAQAGNICVASFDWSCSGICRSSERIREVHRRCGEGENAVWSAVF 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359494046|ref|XP_002279828.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224128958|ref|XP_002320464.1| predicted protein [Populus trichocarpa] gi|222861237|gb|EEE98779.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356542818|ref|XP_003539862.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|145323746|ref|NP_001077462.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gi|221222586|sp|A8MRC7.1|B3GT2_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 2 gi|332189677|gb|AEE27798.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297848780|ref|XP_002892271.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297338113|gb|EFH68530.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15220440|ref|NP_172009.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gi|14488078|gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gi|2388580|gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gi|21360399|gb|AAM47315.1| At1g05170/YUP8H12_22 [Arabidopsis thaliana] gi|332189676|gb|AEE27797.1| putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225447013|ref|XP_002268282.1| PREDICTED: probable beta-1,3-galactosyltransferase 2 [Vitis vinifera] gi|297739150|emb|CBI28801.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255554873|ref|XP_002518474.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] gi|223542319|gb|EEF43861.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356517642|ref|XP_003527496.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
TAIR|locus:2207225407 AT1G05170 [Arabidopsis thalian 0.982 0.955 0.653 6.4e-147
TAIR|locus:2062545409 AT2G32430 [Arabidopsis thalian 1.0 0.968 0.635 1.6e-143
TAIR|locus:2027352384 AT1G11730 [Arabidopsis thalian 0.957 0.986 0.659 1.3e-139
TAIR|locus:2116452407 AT4G26940 [Arabidopsis thalian 0.972 0.945 0.635 7.2e-139
TAIR|locus:2038031399 AT1G32930 [Arabidopsis thalian 0.962 0.954 0.575 1.7e-123
TAIR|locus:2029471393 AT1G77810 [Arabidopsis thalian 0.939 0.946 0.605 1.2e-122
TAIR|locus:505006138398 DD46 [Arabidopsis thaliana (ta 0.939 0.934 0.554 4.9e-117
TAIR|locus:2154247338 AT5G53340 [Arabidopsis thalian 0.770 0.902 0.416 7.1e-61
TAIR|locus:2116627345 AT4G32120 [Arabidopsis thalian 0.631 0.724 0.443 9.9e-55
TAIR|locus:2059531346 AT2G25300 [Arabidopsis thalian 0.568 0.650 0.495 1.3e-54
TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1435 (510.2 bits), Expect = 6.4e-147, P = 6.4e-147
 Identities = 262/401 (65%), Positives = 318/401 (79%)

Query:     8 GEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTE--------EIEN 59
             GE++SR+ + RKW + LC  SFC GM FTNRMW +PESKG++  S TE        E  N
Sbjct:     7 GEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAERLKLVSEGCN 66

Query:    60 PELAVKHESNNNTEKL----AMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGT 115
             P+   + E   + + L    A    A+Q+ DK +  L+ ++ A R+ ++S+    P+   
Sbjct:    67 PKALYQKEVKRDPQALFGEVANTHIALQTLDKTISSLEMELAAARSVQESLQNGAPLSDD 126

Query:   116 SNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHS 175
                     +R++ MV+GINTAFSSRKRRDS+RATWMPQGEKRK LEE KGIIIRFVIGHS
Sbjct:   127 MGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHS 186

Query:   176 ATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDV 235
             AT+GGILD+AI+AE++ HGDFLRL+H+EGYLELS KTKTYF+TA SMWDA+FY+KVDDDV
Sbjct:   187 ATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDV 246

Query:   236 HVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQ 295
             HVN+ATLG TL  HR KPRVY+GCMKSGPVL++KGV+Y+EPEYWKFGE GNKYFRHATGQ
Sbjct:   247 HVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQ 306

Query:   296 LYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQL 355
             LYA+S+DLA+YISINQH+LHKYANEDVSLG+WFIG+DV+H+DDRRLCCGTPPDCEWKAQ 
Sbjct:   307 LYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQA 366

Query:   356 GKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF 396
             G  CVA+FDW CSGIC+S +RIKEVH  CGEGE  LW A+F
Sbjct:   367 GNICVASFDWSCSGICRSADRIKEVHRRCGEGEKALWSATF 407
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A8MRC7B3GT2_ARATH2, ., 4, ., 1, ., -0.65330.98230.9557yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.79LOW CONFIDENCE prediction!
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 0.0
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 4e-59
pfam1333489 pfam13334, DUF4094, Domain of unknown function (DU 2e-19
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 8e-05
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  640 bits (1653), Expect = 0.0
 Identities = 277/408 (67%), Positives = 330/408 (80%), Gaps = 12/408 (2%)

Query: 1   MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKTEEIE-- 58
           MS KS G E++SR+++ RKW L LC   FCAGM FT+RMW +PESKG++R + TE     
Sbjct: 1   MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLK 60

Query: 59  ------NPELA----VKHESNNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSL 108
                 +P+      VK +S +   +++    AIQ+ DK +  L+ ++ A RA ++S+  
Sbjct: 61  LVSEGCDPKTLYQKEVKRDSKDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILN 120

Query: 109 SHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIII 168
             P+      + S  KR+Y MV+GINTAFSSRKRRDSVRATWMPQGEKRK LEE KGIII
Sbjct: 121 GSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIII 180

Query: 169 RFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFY 228
           RFVIGHSATSGGILD+AI+AE++ HGDFLRL+H+EGYLELSAKTKTYFATAV+MWDA+FY
Sbjct: 181 RFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY 240

Query: 229 IKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKY 288
           +KVDDDVHVN+ATLG TL  HR KPRVY+GCMKSGPVL++KGV+Y+EPEYWKFGE GNKY
Sbjct: 241 VKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKY 300

Query: 289 FRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPD 348
           FRHATGQLYA+SKDLA+YISINQH+LHKYANEDVSLGSWFIGLDVEH+DDRRLCCGTPPD
Sbjct: 301 FRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPD 360

Query: 349 CEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF 396
           CEWKAQ G  CVA+FDW CSGIC+S +RIKEVH  CGEGE+ LW A+F
Sbjct: 361 CEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSATF 408

Length = 408
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094) Back     alignment and domain information
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 396
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
PF1333495 DUF4094: Domain of unknown function (DUF4094) 99.93
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.78
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.66
PLN03153 537 hypothetical protein; Provisional 99.13
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.75
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 95.34
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 94.93
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 94.7
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 94.35
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 93.49
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 93.34
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 93.11
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 92.53
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 91.84
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 91.43
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 90.86
PRK11204 420 N-glycosyltransferase; Provisional 90.42
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 90.37
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 89.11
cd06423180 CESA_like CESA_like is the cellulose synthase supe 88.46
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 87.83
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 87.38
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 87.22
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 86.36
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 82.52
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 82.38
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 82.02
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 81.19
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.9e-109  Score=827.03  Aligned_cols=396  Identities=70%  Similarity=1.207  Sum_probs=365.8

Q ss_pred             CCccccCCCcccCCCCchhHHHHHHHHHHhhHhhhcccCCCCCcCccccccccC--------ccCCchhh---h-hcccc
Q 016036            1 MSFKSTGGEFASRNLIPRKWALFLCACSFCAGMSFTNRMWMMPESKGVARISKT--------EEIENPEL---A-VKHES   68 (396)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---~-~~~~~   68 (396)
                      ||.|+||+++++++.||+||+++||++|||+|++||||||..||+.+..+.++.        ..||++++   | .++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~   80 (408)
T PLN03193          1 MSTKSRGEEYSSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAERLKLVSEGCDPKTLYQKEVKRDS   80 (408)
T ss_pred             CCcccccccccccccccHHHHHHHHHHHHHHHHhhccccccCCccccccccccchhhhhhhhccccccccccccccccch
Confidence            899999999999999999999999999999999999999999998887665433        23898765   2 24588


Q ss_pred             chhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccCCCCCCCCcccCCCCCCCCeeEEEEEeCCCCCHHHHHHHHH
Q 016036           69 NNNTEKLAMVEQAIQSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRA  148 (396)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LlI~V~S~p~~~~rR~aIR~  148 (396)
                      ++||+||++||+|||+|+|+|+.||||||+|++.+..+.++.|.+++....+...+++++|||+|+|+|+|++||++||+
T Consensus        81 ~~~~~~~~~t~~~~~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~  160 (408)
T PLN03193         81 KDIIGEVSKTHNAIQTLDKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRA  160 (408)
T ss_pred             hHHHHHHhhHHHHHHHHhhhhhHHhHHHHHHHhhhhhhccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999977766766665543333345567889999999999999999999999


Q ss_pred             HhccCcccchhhhccCceEEEEEeccCCCCCcchHHHHHHHHhHcCCEEEecccccCCchhHHHHHHHHHHHhcCCceEE
Q 016036          149 TWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFY  228 (396)
Q Consensus       149 TW~~~~~~~~~l~~~~~i~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~f~  228 (396)
                      |||++++.+.+++.+.+|+++||+|++.++++.++++|++|+++|||||++||+|+|.|||+||+++|+||.++++|+||
T Consensus       161 TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~  240 (408)
T PLN03193        161 TWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY  240 (408)
T ss_pred             HHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEE
Confidence            99999877677777899999999999987667899999999999999999999999999999999999999999999999


Q ss_pred             EEeccceeEeHHHHHHHHHhcCCCCceEEEEeecCcccccCCCccccCcccccCCCCCCcCCCcCCCceeeCHHHHHHHH
Q 016036          229 IKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYIS  308 (396)
Q Consensus       229 lKvDDDvfVnv~~L~~~L~~~~~~~~lY~G~~~~~pv~r~~~~K~~~p~~~~f~d~~~~YP~y~~G~gYvlS~dla~~I~  308 (396)
                      +|+|||+|||+++|+.+|.+++.++++|+|||+++|++.+++.|||+|++|+||++++.|||||+|+|||||+|+|++|+
T Consensus       241 mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~  320 (408)
T PLN03193        241 VKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYIS  320 (408)
T ss_pred             EEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHH
Confidence            99999999999999999998877788999999989988778889999999999988999999999999999999999999


Q ss_pred             HhccccCCCCchhHHHHHHHhcCCCeEecCCCcccCCCCCcccccccCCcccccccccccccchhhHHHHHhhccCchhH
Q 016036          309 INQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGE  388 (396)
Q Consensus       309 ~~~~~l~~~~~EDV~vG~~l~~L~v~~i~~~~f~~~~~~~~ewk~~~~~~C~~sf~~~~~g~c~~~~~~~~vH~~~p~~~  388 (396)
                      .+...++.|++|||+||+||++|+|+|+|+++|||+++|+|+||++++++|+++|||+|||+|++.+||.++|+.|+|+.
T Consensus       321 ~n~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~~~~~~csg~c~~~~~~~~~h~~c~~~~  400 (408)
T PLN03193        321 INQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGE  400 (408)
T ss_pred             hChhhhcccCcchhhhhhHhccCCceeeecccccCCCCccccccccCCCeeEEEecccCcccCCHHHHHHHHHHhcCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhcC
Q 016036          389 DTLWRASF  396 (396)
Q Consensus       389 ~~~W~~~~  396 (396)
                      .++|+++|
T Consensus       401 ~~~~~~~~  408 (408)
T PLN03193        401 NALWSATF  408 (408)
T ss_pred             ccceeecC
Confidence            99999886

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>PF13334 DUF4094: Domain of unknown function (DUF4094) Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 41/284 (14%), Positives = 76/284 (26%), Gaps = 87/284 (30%)

Query: 161 EEAKGII--------IRFVIGHSATSG-GILDKAIDAEEKMHGDFLRLEHI-EGYLELSA 210
           EE   II           +     +    ++ K ++   +++  FL +  I     + S 
Sbjct: 49  EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL-MSPIKTEQRQPSM 107

Query: 211 KTKTYFATAVSMW-DAEFYIKVDDDVHVNLATLGMTL--AAHRTKPRVYV------GCMK 261
            T+ Y      ++ D + + K     +V+     + L  A    +P   V      G  K
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKY----NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 262 SGPVLARKGVKYYEPE-------YW-KFG---------EIGNKYFRHATGQLYALSKDLA 304
           +   +A      Y+ +       +W             E+  K          + S   +
Sbjct: 164 T--WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 305 TYI----SINQHL-----LHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQL 355
                  SI   L        Y N    L      L + +V + +          W A  
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYEN---CL------LVLLNVQNAKA---------WNA-- 261

Query: 356 GKTCVATFDWRC--------SGICKSVERIKEVHELCGEGEDTL 391
                  F+  C          +   +      H        TL
Sbjct: 262 -------FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.92
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 93.3
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 91.5
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 89.9
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 88.54
3bcv_A240 Putative glycosyltransferase protein; protein stru 88.3
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 86.83
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 81.33
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=99.92  E-value=6e-25  Score=213.15  Aligned_cols=193  Identities=17%  Similarity=0.166  Sum_probs=131.1

Q ss_pred             CeeEEEEEeCCCCC-HHHHHHHHHHhccCcccchhhhccCceEEEEEeccCCCCCcchHHHHHHHHhHcCCEEEeccc--
Q 016036          126 KYFMVIGINTAFSS-RKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHI--  202 (396)
Q Consensus       126 ~~~LlI~V~S~p~~-~~rR~aIR~TW~~~~~~~~~l~~~~~i~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~--  202 (396)
                      .-.++|+|+|++++ .+|+++||+||++.+..        .   .||.+...  +..    +...  ..++++..++.  
T Consensus        12 ~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~--------~---~fifsd~~--d~~----l~~~--~~~~~~~~~~~~~   72 (280)
T 2j0a_A           12 LGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ--------Q---TFIFTDSP--DER----LQER--LGPHLVVTQCSAE   72 (280)
T ss_dssp             GGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG--------G---EEEEESSC--CHH----HHHH--HGGGEEECCC---
T ss_pred             cccEEEEEECcHHHHHHHHHHHHHHHhccCCC--------c---eEEEcCCC--ccc----cccc--ccccceecccccc
Confidence            45788899999984 57889999999987631        1   23333222  222    2222  35678887764  


Q ss_pred             ccCCchhHHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHHHHHhcCCCCceEEEEeecCcccccCCCccccCcccccC
Q 016036          203 EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFG  282 (396)
Q Consensus       203 DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~~L~~~~~~~~lY~G~~~~~pv~r~~~~K~~~p~~~~f~  282 (396)
                      +++.+++.|+...+.+.. +++++|++|+|||+|||+++|+.+|...++.+++|+|+.....+++   .++++|.+.+  
T Consensus        73 ~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~~--  146 (280)
T 2j0a_A           73 HSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQRT--  146 (280)
T ss_dssp             ----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC--------------------
T ss_pred             ccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCccccc--
Confidence            467889999999998754 3599999999999999999999999999999999999975332222   1345554322  


Q ss_pred             CCCCCcCCCc-CCCceeeCHHHHHHHHHhcccc-------CCCCchhHHHHHHHh-cCCCeEecCCCcccCC
Q 016036          283 EIGNKYFRHA-TGQLYALSKDLATYISINQHLL-------HKYANEDVSLGSWFI-GLDVEHVDDRRLCCGT  345 (396)
Q Consensus       283 d~~~~YP~y~-~G~gYvlS~dla~~I~~~~~~l-------~~~~~EDV~vG~~l~-~L~v~~i~~~~f~~~~  345 (396)
                       +...|+ || +|+|||||++++++|+......       .....||+++|.|+. .+||.+.+.+.|....
T Consensus       147 -~~~~~~-y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~  216 (280)
T 2j0a_A          147 -KLVRFW-FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHL  216 (280)
T ss_dssp             -----CC-EECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSS
T ss_pred             -cccccC-cccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCC
Confidence             223454 66 6789999999999999754322       223469999999998 9999999999987543
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 89.59
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.59  E-value=3.9  Score=36.05  Aligned_cols=159  Identities=13%  Similarity=0.102  Sum_probs=81.9

Q ss_pred             EEEEEeccCCCCCcchHHHHHHHHhHcCCEE-EecccccCCchhHHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHHH
Q 016036          167 IIRFVIGHSATSGGILDKAIDAEEKMHGDFL-RLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMT  245 (396)
Q Consensus       167 ~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl-~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~~  245 (396)
                      .++.|-.-|.  +++....+++-.+.+.+-+ .+...++. ..+    .+...+.+....+|++.+|+|+.+..+.|..+
T Consensus        56 EIIvVDdgS~--d~~~~~~l~~~~~~~~~~i~vi~~~~n~-G~~----~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l  128 (328)
T d1xhba2          56 EIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRS-GLI----RARLKGAAVSRGQVITFLDAHCECTAGWLEPL  128 (328)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCC-CHH----HHHHHHHHHCCSSEEEEEESSEEECTTCHHHH
T ss_pred             EEEEEECCCC--hhhHHHHHHHHHHhcCCCeEEEEecccc-cch----HHHHHHHHhhhcceeeecCcccccChhHHHHH
Confidence            4555554443  3445555555555655533 33332221 222    23455555568899999999999998877766


Q ss_pred             HHhcCCCCc-eEEEEee--cC---------ccccc-----CCCccc-cCccc---ccCC-CCCCcCCCcCCCceeeCHHH
Q 016036          246 LAAHRTKPR-VYVGCMK--SG---------PVLAR-----KGVKYY-EPEYW---KFGE-IGNKYFRHATGQLYALSKDL  303 (396)
Q Consensus       246 L~~~~~~~~-lY~G~~~--~~---------pv~r~-----~~~K~~-~p~~~---~f~d-~~~~YP~y~~G~gYvlS~dl  303 (396)
                      +......+. +..|.+.  .+         +..+.     ....|+ .|...   ...+ .....-+++.|+++++++++
T Consensus       129 ~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  208 (328)
T d1xhba2         129 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY  208 (328)
T ss_dssp             HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred             HHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHH
Confidence            654432222 2222221  10         11000     000111 11100   0000 01122346789999999999


Q ss_pred             HHHHHHhccccCCCCchhHHHHHHHhcCC
Q 016036          304 ATYISINQHLLHKYANEDVSLGSWFIGLD  332 (396)
Q Consensus       304 a~~I~~~~~~l~~~~~EDV~vG~~l~~L~  332 (396)
                      ...+---.+.+..+..||+-++.-+...|
T Consensus       209 f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G  237 (328)
T d1xhba2         209 FQEIGTYDAGMDIWGGENLEISFRIWQCG  237 (328)
T ss_dssp             HHHTTSCCTTSCTTCCCCSHHHHHHHHTT
T ss_pred             HHHhCCCCCCCcCcCchHHHHHHHHHHhC
Confidence            99875444444445579988876665444