Citrus Sinensis ID: 016055

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
MLLSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASMNPFS
cccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHccccHHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHEEcEEEHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHcHccHHHHHHHHHHHHHHHHHcHcEEEEEHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEcHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccc
mllsfhsdLLSNVCFFIFWLPCalwkqtmgfsdIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIaeitpknlrggftTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIglcfipesprwlaktgkgieSEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQqfggvngiAFYASSIFisagfsgsIGMIAMVVIQIPMTLLGVLLmdksgrrplLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGsfslgmggipwvimsevfpinmkgsaGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLvpetkgrtLEEIQASMNPFS
MLLSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPetkgrtleeiqasmnpfs
MLLSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGadadiseeaaeireYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNgiafyassifisagfsgsigmiaMVVIQIPMTLLGVLLMDKSGRRPLLLVSaagtclgcllaalSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASMNPFS
****FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGI**********************IREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVP******************
***SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAA******************ELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASM****
MLLSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASMNPFS
MLLSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASMN***
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
ooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
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MLLSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADxxxxxxxxxxxxxxxxxxxxxGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASMNPFS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query396 2.2.26 [Sep-21-2011]
Q3ECP7470 Sugar transporter ERD6-li yes no 0.926 0.780 0.732 1e-155
P93051463 Sugar transporter ERD6-li no no 0.931 0.796 0.574 1e-127
Q8LBI9482 Sugar transporter ERD6-li no no 0.929 0.763 0.574 1e-121
Q0WQ63470 Sugar transporter ERD6-li no no 0.926 0.780 0.548 1e-111
Q94CI6478 Sugar transporter ERD6-li no no 0.926 0.767 0.523 1e-110
Q94AF9467 Sugar transporter ERD6-li no no 0.929 0.788 0.505 1e-109
Q93Z80458 Sugar transporter ERD6-li no no 0.929 0.803 0.502 1e-108
Q94CI7474 Sugar transporter ERD6-li no no 0.926 0.774 0.514 1e-106
O04036496 Sugar transporter ERD6 OS no no 0.929 0.741 0.489 1e-104
Q8VZT3462 Sugar transporter ERD6-li no no 0.924 0.792 0.505 1e-104
>sp|Q3ECP7|ERDL5_ARATH Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2 Back     alignment and function desciption
 Score =  547 bits (1410), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 269/367 (73%), Positives = 310/367 (84%)

Query: 26  KQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85
           + TMGFS++ CI+GW+ I  SK A WLD+GR LVGYGMG+ S+VVPVYIAEITPK LRGG
Sbjct: 99  RATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFVVPVYIAEITPKGLRGG 158

Query: 86  FTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGI 145
           FTTVHQL+IC+GVS+TYL+G+F+ WRILALIG IPC+VQ++GL  IPESPRWLAK GK  
Sbjct: 159 FTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLFVIPESPRWLAKVGKWE 218

Query: 146 ESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQ 205
           E E ALQRLRG  ADIS E+ EI++YT  L  LSEG I++LFQ +YA SL+VGVGLMVLQ
Sbjct: 219 EFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQPQYAKSLVVGVGLMVLQ 278

Query: 206 QFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAG 265
           QFGGVNGIAFYASSIF SAG S  IGMIAMVV+QIPMT LGVLLMDKSGRRPLLL+SA G
Sbjct: 279 QFGGVNGIAFYASSIFESAGVSSKIGMIAMVVVQIPMTTLGVLLMDKSGRRPLLLISATG 338

Query: 266 TCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMK 325
           TC+GC L  LSF  Q ++Q      +LAL GVLVYTGSFSLGMGGIPWVIMSE+FPI++K
Sbjct: 339 TCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMGGIPWVIMSEIFPIDIK 398

Query: 326 GSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTL 385
           GSAGSLVT+VSW+GSWIISFTFNFLM W+  GTF+ F+ +C  TV+FVAKLVPETKGRTL
Sbjct: 399 GSAGSLVTVVSWVGSWIISFTFNFLMNWNPAGTFYVFATVCGATVIFVAKLVPETKGRTL 458

Query: 386 EEIQASM 392
           EEIQ S+
Sbjct: 459 EEIQYSI 465
Sugar transporter.
Arabidopsis thaliana (taxid: 3702)
>sp|P93051|ERDL7_ARATH Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2 Back     alignment and function description
>sp|Q8LBI9|EDL16_ARATH Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2 Back     alignment and function description
>sp|Q0WQ63|ERDL8_ARATH Sugar transporter ERD6-like 8 OS=Arabidopsis thaliana GN=At3g05150 PE=2 SV=1 Back     alignment and function description
>sp|Q94CI6|EDL18_ARATH Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1 Back     alignment and function description
>sp|Q94AF9|EDL11_ARATH Sugar transporter ERD6-like 11 OS=Arabidopsis thaliana GN=At3g05165 PE=2 SV=2 Back     alignment and function description
>sp|Q93Z80|EDL10_ARATH Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1 Back     alignment and function description
>sp|Q94CI7|EDL17_ARATH Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2 Back     alignment and function description
>sp|O04036|ERD6_ARATH Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3 Back     alignment and function description
>sp|Q8VZT3|EDL12_ARATH Sugar transporter ERD6-like 12 OS=Arabidopsis thaliana GN=SUGTL5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
224125374442 predicted protein [Populus trichocarpa] 0.936 0.839 0.830 1e-176
255542520488 sugar transporter, putative [Ricinus com 0.936 0.760 0.824 1e-174
356504068486 PREDICTED: sugar transporter ERD6-like 5 0.934 0.761 0.768 1e-164
298205031 517 unnamed protein product [Vitis vinifera] 0.936 0.717 0.760 1e-163
225451069488 PREDICTED: putative ERD6-like transporte 0.936 0.760 0.760 1e-163
449435707479 PREDICTED: sugar transporter ERD6-like 5 0.936 0.774 0.727 1e-158
449485745479 PREDICTED: sugar transporter ERD6-like 5 0.936 0.774 0.725 1e-158
356571144478 PREDICTED: sugar transporter ERD6-like 5 0.936 0.776 0.727 1e-157
124361039481 General substrate transporter; Sugar tra 0.929 0.765 0.732 1e-157
356505890482 PREDICTED: sugar transporter ERD6-like 5 0.936 0.769 0.727 1e-157
>gi|224125374|ref|XP_002319570.1| predicted protein [Populus trichocarpa] gi|222857946|gb|EEE95493.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/371 (83%), Positives = 337/371 (90%)

Query: 26  KQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85
           + TMGFS+I+CIIGW++I FSKA+WWLD+GRLLVGYGMGLLSYV+P+YIAEITPKNLRGG
Sbjct: 69  RGTMGFSEIICIIGWMLITFSKASWWLDVGRLLVGYGMGLLSYVIPIYIAEITPKNLRGG 128

Query: 86  FTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGI 145
           FTTVHQLMIC GVS+TYLIGAF++WR LALIGTIPC+VQ++GL FIPESPRWLAK G+G 
Sbjct: 129 FTTVHQLMICCGVSITYLIGAFMSWRSLALIGTIPCIVQIVGLFFIPESPRWLAKIGQGK 188

Query: 146 ESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQ 205
           E E ALQ LRG +ADIS+EAAEIR+YTET+ +LSE  I ELFQ KYAHSLIVGVGLMVLQ
Sbjct: 189 ECEVALQCLRGHNADISDEAAEIRDYTETILQLSEASIFELFQWKYAHSLIVGVGLMVLQ 248

Query: 206 QFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAG 265
           QFGGVNGIAFYASSIFISAGFSGSIGMIAMVV+QIPMT LGV+LMD SGRRPLL+VSAAG
Sbjct: 249 QFGGVNGIAFYASSIFISAGFSGSIGMIAMVVVQIPMTALGVVLMDISGRRPLLMVSAAG 308

Query: 266 TCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMK 325
           TCLGC LAALSFL Q L + +  +PFLAL GVL+YTGSFSLGMGGIPWVIMSEVFPIN K
Sbjct: 309 TCLGCFLAALSFLLQYLNKSVAVSPFLALFGVLIYTGSFSLGMGGIPWVIMSEVFPINTK 368

Query: 326 GSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTL 385
           GSAGSLVTLVSWLGSWIIS+ FNFLM WSS GTFF FS IC LTVLFVAKLVPETKGRTL
Sbjct: 369 GSAGSLVTLVSWLGSWIISYAFNFLMDWSSAGTFFIFSCICGLTVLFVAKLVPETKGRTL 428

Query: 386 EEIQASMNPFS 396
           EEIQASMNP S
Sbjct: 429 EEIQASMNPLS 439

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255542520|ref|XP_002512323.1| sugar transporter, putative [Ricinus communis] gi|223548284|gb|EEF49775.1| sugar transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356504068|ref|XP_003520821.1| PREDICTED: sugar transporter ERD6-like 5-like [Glycine max] Back     alignment and taxonomy information
>gi|298205031|emb|CBI34338.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225451069|ref|XP_002263418.1| PREDICTED: putative ERD6-like transporter [Vitis vinifera] gi|310877850|gb|ADP37156.1| putative ERD6-like transporter [Vitis vinifera] Back     alignment and taxonomy information
>gi|449435707|ref|XP_004135636.1| PREDICTED: sugar transporter ERD6-like 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449485745|ref|XP_004157263.1| PREDICTED: sugar transporter ERD6-like 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356571144|ref|XP_003553740.1| PREDICTED: sugar transporter ERD6-like 5-like [Glycine max] Back     alignment and taxonomy information
>gi|124361039|gb|ABN09011.1| General substrate transporter; Sugar transporter superfamily [Medicago truncatula] Back     alignment and taxonomy information
>gi|356505890|ref|XP_003521722.1| PREDICTED: sugar transporter ERD6-like 5-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
TAIR|locus:2199539470 AT1G54730 [Arabidopsis thalian 0.926 0.780 0.640 9.2e-123
TAIR|locus:2066400463 AT2G48020 [Arabidopsis thalian 0.931 0.796 0.490 1.5e-97
TAIR|locus:2144975482 AT5G18840 "AT5G18840" [Arabido 0.921 0.757 0.502 5.9e-96
TAIR|locus:2146365478 SFP2 [Arabidopsis thaliana (ta 0.926 0.767 0.468 4.5e-91
TAIR|locus:505006329467 AT3G05165 [Arabidopsis thalian 0.926 0.785 0.444 5.3e-88
TAIR|locus:2096219470 AT3G05150 [Arabidopsis thalian 0.926 0.780 0.480 6.7e-88
TAIR|locus:2096234458 AT3G05160 [Arabidopsis thalian 0.926 0.801 0.438 2e-86
TAIR|locus:2092379488 AT3G20460 [Arabidopsis thalian 0.919 0.745 0.439 6.9e-86
TAIR|locus:2146350474 SFP1 [Arabidopsis thaliana (ta 0.921 0.770 0.452 4.9e-85
TAIR|locus:2036084496 ERD6 "EARLY RESPONSE TO DEHYDR 0.929 0.741 0.432 5.6e-84
TAIR|locus:2199539 AT1G54730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1207 (429.9 bits), Expect = 9.2e-123, P = 9.2e-123
 Identities = 235/367 (64%), Positives = 272/367 (74%)

Query:    26 KQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85
             + TMGFS++ CI+GW+ I  SK A WLD+GR LVGYGMG+ S+VVPVYIAEITPK LRGG
Sbjct:    99 RATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFVVPVYIAEITPKGLRGG 158

Query:    86 FTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGI 145
             FTTVHQL+IC+GVS+TYL+G+F+ WRILALIG IPC+VQ++GL  IPESPRWLAK GK  
Sbjct:   159 FTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLFVIPESPRWLAKVGKWE 218

Query:   146 ESEAALQRLRGXXXXXXXXXXXXXXYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQ 205
             E E ALQRLRG              YT  L  LSEG I++LFQ +YA SL+VGVGLMVLQ
Sbjct:   219 EFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQPQYAKSLVVGVGLMVLQ 278

Query:   206 QFGGVNXXXXXXXXXXXXXXXXXXXXXXXMVVIQIPMTLLGVLLMDKSGRRPLLLVSXXX 265
             QFGGVN                       MVV+QIPMT LGVLLMDKSGRRPLLL+S   
Sbjct:   279 QFGGVNGIAFYASSIFESAGVSSKIGMIAMVVVQIPMTTLGVLLMDKSGRRPLLLISATG 338

Query:   266 XXXXXXXXXXSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMK 325
                       SF  Q ++Q      +LAL GVLVYTGSFSLGMGGIPWVIMSE+FPI++K
Sbjct:   339 TCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMGGIPWVIMSEIFPIDIK 398

Query:   326 GSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTL 385
             GSAGSLVT+VSW+GSWIISFTFNFLM W+  GTF+ F+ +C  TV+FVAKLVPETKGRTL
Sbjct:   399 GSAGSLVTVVSWVGSWIISFTFNFLMNWNPAGTFYVFATVCGATVIFVAKLVPETKGRTL 458

Query:   386 EEIQASM 392
             EEIQ S+
Sbjct:   459 EEIQYSI 465
GO:0005215 "transporter activity" evidence=IEA
GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0006810 "transport" evidence=IEA
GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA;ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0022857 "transmembrane transporter activity" evidence=IEA
GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2066400 AT2G48020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144975 AT5G18840 "AT5G18840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146365 SFP2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006329 AT3G05165 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096219 AT3G05150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096234 AT3G05160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092379 AT3G20460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146350 SFP1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036084 ERD6 "EARLY RESPONSE TO DEHYDRATION 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q3ECP7ERDL5_ARATHNo assigned EC number0.73290.92670.7808yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XIII.1134.1
hypothetical protein (437 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 6e-75
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 4e-66
PRK10077479 PRK10077, xylE, D-xylose transporter XylE; Provisi 6e-57
TIGR00898505 TIGR00898, 2A0119, cation transport protein 8e-21
TIGR00887502 TIGR00887, 2A0109, phosphate:H+ symporter 7e-08
TIGR00895398 TIGR00895, 2A0115, benzoate transport 2e-07
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 1e-05
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 2e-05
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 7e-05
TIGR01299 742 TIGR01299, synapt_SV2, synaptic vesicle protein SV 7e-05
TIGR00883394 TIGR00883, 2A0106, metabolite-proton symporter 8e-05
TIGR00893399 TIGR00893, 2A0114, D-galactonate transporter 1e-04
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information 
 Score =  239 bits (612), Expect = 6e-75
 Identities = 131/375 (34%), Positives = 211/375 (56%), Gaps = 13/375 (3%)

Query: 26  KQTMGFSDIVCIIGWVIIVFSKAA--WWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83
           K+++   +++ +IG ++  F+K    + L +GR++VG G+G +S +VP+YI+EI PK LR
Sbjct: 76  KKSLLIGNVLFVIGALLQGFAKGKSFYMLIVGRVIVGLGVGGISVLVPMYISEIAPKKLR 135

Query: 84  GGFTTVHQLMICIGVSMTYLIGAFLN-------WRILALIGTIPCLVQLIGLCFIPESPR 136
           G   +++QL I  G+ +  +IG  LN       WRI   +  +P ++ LIGL F+PESPR
Sbjct: 136 GALGSLYQLGITFGILVAAIIGLGLNKYSNSDGWRIPLGLQFVPAILLLIGLLFLPESPR 195

Query: 137 WLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLI 196
           WL   GK  E+ A L +LRG      E   E      ++E      +     +     L+
Sbjct: 196 WLVLKGKLEEARAVLAKLRGVSDVDQEIQEEKDSLERSVEAEKASWLELFRGKTVRQRLL 255

Query: 197 VGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGM-IAMVVIQIPMTLLGVLLMDKSGR 255
           +GV L + QQ  G+N I +Y+ +IF + G S S+ + I + V+    T + + L+D+ GR
Sbjct: 256 MGVMLQIFQQLTGINAIFYYSPTIFETLGLSDSLLVTIIVGVVNFVFTFIAIFLVDRFGR 315

Query: 256 RPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315
           RPLLL+ AAG  +  L+  ++ L     +       +A+V +L++   F+LG G +PWVI
Sbjct: 316 RPLLLLGAAGMAICFLVLGVALLGVAKSKGAG---IVAIVFILLFIAFFALGWGPVPWVI 372

Query: 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAK 375
           +SE+FP+ ++  A ++ T  +WL +++I F F  +        F  F+ +  L +LFV  
Sbjct: 373 VSELFPLGVRPKAMAIATAANWLANFLIGFLFPIITGAIGGYVFLVFAGLLVLFILFVFF 432

Query: 376 LVPETKGRTLEEIQA 390
            VPETKGRTLEEI  
Sbjct: 433 FVPETKGRTLEEIDE 447

Length = 449
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information
>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein Back     alignment and domain information
>gnl|CDD|129965 TIGR00887, 2A0109, phosphate:H+ symporter Back     alignment and domain information
>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|130366 TIGR01299, synapt_SV2, synaptic vesicle protein SV2 Back     alignment and domain information
>gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter Back     alignment and domain information
>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 396
KOG0569485 consensus Permease of the major facilitator superf 100.0
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 100.0
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 100.0
KOG0254513 consensus Predicted transporter (major facilitator 100.0
TIGR00898505 2A0119 cation transport protein. 100.0
PRK10077479 xylE D-xylose transporter XylE; Provisional 100.0
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 100.0
PRK10642490 proline/glycine betaine transporter; Provisional 100.0
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 100.0
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 100.0
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 100.0
PRK09952438 shikimate transporter; Provisional 100.0
PRK10406432 alpha-ketoglutarate transporter; Provisional 100.0
PRK12307426 putative sialic acid transporter; Provisional 100.0
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 100.0
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 100.0
TIGR00891405 2A0112 putative sialic acid transporter. 100.0
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 100.0
PRK11663434 regulatory protein UhpC; Provisional 100.0
PRK10489417 enterobactin exporter EntS; Provisional 100.0
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 100.0
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 100.0
PRK15075434 citrate-proton symporter; Provisional 100.0
PRK03545390 putative arabinose transporter; Provisional 100.0
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 100.0
PRK09705393 cynX putative cyanate transporter; Provisional 100.0
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 100.0
TIGR00893399 2A0114 d-galactonate transporter. 99.98
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.98
PRK05122399 major facilitator superfamily transporter; Provisi 99.98
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.98
PRK03893496 putative sialic acid transporter; Provisional 99.97
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.97
PRK12382392 putative transporter; Provisional 99.97
TIGR00895398 2A0115 benzoate transport. 99.97
TIGR00900365 2A0121 H+ Antiporter protein. 99.97
PRK10091382 MFS transport protein AraJ; Provisional 99.97
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.97
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.97
PRK11195393 lysophospholipid transporter LplT; Provisional 99.97
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.97
PRK03699394 putative transporter; Provisional 99.97
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.97
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.97
PRK09874408 drug efflux system protein MdtG; Provisional 99.97
KOG2532466 consensus Permease of the major facilitator superf 99.97
PRK10504471 putative transporter; Provisional 99.97
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.96
PRK03633381 putative MFS family transporter protein; Provision 99.96
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.96
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.96
PLN00028476 nitrate transmembrane transporter; Provisional 99.96
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.96
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.96
PRK11043401 putative transporter; Provisional 99.96
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.96
PRK11646400 multidrug resistance protein MdtH; Provisional 99.96
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.96
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.96
TIGR00897402 2A0118 polyol permease family. This family of prot 99.96
KOG1330493 consensus Sugar transporter/spinster transmembrane 99.96
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.96
PRK10054395 putative transporter; Provisional 99.96
PRK11010491 ampG muropeptide transporter; Validated 99.96
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.95
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.95
KOG2533495 consensus Permease of the major facilitator superf 99.95
PRK15011393 sugar efflux transporter B; Provisional 99.95
PRK10133438 L-fucose transporter; Provisional 99.95
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.95
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.95
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.95
TIGR00896355 CynX cyanate transporter. This family of proteins 99.95
PRK09528420 lacY galactoside permease; Reviewed 99.94
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.94
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.94
PRK11652394 emrD multidrug resistance protein D; Provisional 99.94
PRK11902402 ampG muropeptide transporter; Reviewed 99.94
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.93
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.93
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.93
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.93
KOG2615451 consensus Permease of the major facilitator superf 99.93
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.93
TIGR00901356 2A0125 AmpG-related permease. 99.93
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.93
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.92
KOG3764464 consensus Vesicular amine transporter [Intracellul 99.92
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.92
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.92
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.9
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.89
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.89
TIGR00805633 oat sodium-independent organic anion transporter. 99.89
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.88
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.88
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.88
PTZ00207591 hypothetical protein; Provisional 99.87
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.86
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.86
PRK09669444 putative symporter YagG; Provisional 99.85
PF13347428 MFS_2: MFS/sugar transport protein 99.82
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.82
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.82
COG2270438 Permeases of the major facilitator superfamily [Ge 99.82
PRK10429473 melibiose:sodium symporter; Provisional 99.82
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.8
COG2211467 MelB Na+/melibiose symporter and related transport 99.79
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.79
PRK11462460 putative transporter; Provisional 99.79
PRK09848448 glucuronide transporter; Provisional 99.77
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.76
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.74
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.73
PRK10642490 proline/glycine betaine transporter; Provisional 99.64
KOG2563480 consensus Permease of the major facilitator superf 99.63
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.62
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.6
KOG2816463 consensus Predicted transporter ADD1 (major facili 99.56
PRK10054 395 putative transporter; Provisional 99.48
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 99.47
KOG2325488 consensus Predicted transporter/transmembrane prot 99.47
PRK11663 434 regulatory protein UhpC; Provisional 99.46
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 99.45
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.45
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 99.44
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 99.42
TIGR00895 398 2A0115 benzoate transport. 99.42
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.42
PRK03545 390 putative arabinose transporter; Provisional 99.42
TIGR00891 405 2A0112 putative sialic acid transporter. 99.42
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 99.42
TIGR00893 399 2A0114 d-galactonate transporter. 99.41
PRK10213 394 nepI ribonucleoside transporter; Reviewed 99.4
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 99.4
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 99.38
PRK10473 392 multidrug efflux system protein MdtL; Provisional 99.38
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.37
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.36
KOG1330 493 consensus Sugar transporter/spinster transmembrane 99.36
PRK10489 417 enterobactin exporter EntS; Provisional 99.36
PRK03699 394 putative transporter; Provisional 99.36
PRK11646 400 multidrug resistance protein MdtH; Provisional 99.35
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 99.35
PRK14995 495 methyl viologen resistance protein SmvA; Provision 99.34
PRK10091 382 MFS transport protein AraJ; Provisional 99.33
PRK12307 426 putative sialic acid transporter; Provisional 99.33
PRK03893 496 putative sialic acid transporter; Provisional 99.33
KOG3098461 consensus Uncharacterized conserved protein [Funct 99.33
PRK15403 413 multidrug efflux system protein MdtM; Provisional 99.33
PLN00028 476 nitrate transmembrane transporter; Provisional 99.32
PRK11652 394 emrD multidrug resistance protein D; Provisional 99.32
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 99.32
PRK10504 471 putative transporter; Provisional 99.32
PRK05122399 major facilitator superfamily transporter; Provisi 99.31
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 99.31
TIGR00900 365 2A0121 H+ Antiporter protein. 99.3
PRK11195 393 lysophospholipid transporter LplT; Provisional 99.3
PRK15462 493 dipeptide/tripeptide permease D; Provisional 99.28
PRK09874 408 drug efflux system protein MdtG; Provisional 99.28
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 99.28
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.28
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 99.27
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.27
PRK15011393 sugar efflux transporter B; Provisional 99.26
PRK10207 489 dipeptide/tripeptide permease B; Provisional 99.26
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.25
PRK09528420 lacY galactoside permease; Reviewed 99.25
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 99.24
TIGR00897 402 2A0118 polyol permease family. This family of prot 99.24
PRK12382392 putative transporter; Provisional 99.24
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 99.23
PRK11043 401 putative transporter; Provisional 99.23
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 99.23
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 99.22
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.21
KOG3626 735 consensus Organic anion transporter [Secondary met 99.21
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 99.2
PRK03633 381 putative MFS family transporter protein; Provision 99.19
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.19
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.18
PRK10077 479 xylE D-xylose transporter XylE; Provisional 99.17
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.17
TIGR00892 455 2A0113 monocarboxylate transporter 1. 99.17
PRK09584 500 tppB putative tripeptide transporter permease; Rev 99.16
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.15
PRK09705 393 cynX putative cyanate transporter; Provisional 99.13
PRK10406 432 alpha-ketoglutarate transporter; Provisional 99.13
PRK15075 434 citrate-proton symporter; Provisional 99.13
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 99.12
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.12
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 99.1
TIGR00805 633 oat sodium-independent organic anion transporter. 99.09
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 99.09
KOG2615 451 consensus Permease of the major facilitator superf 99.08
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.07
PRK09952 438 shikimate transporter; Provisional 99.06
TIGR00898505 2A0119 cation transport protein. 99.06
PTZ00207 591 hypothetical protein; Provisional 99.04
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.04
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.03
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 99.02
PRK10133 438 L-fucose transporter; Provisional 99.01
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 99.0
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 99.0
KOG3764 464 consensus Vesicular amine transporter [Intracellul 98.98
TIGR00902382 2A0127 phenyl proprionate permease family protein. 98.97
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.96
PRK11010 491 ampG muropeptide transporter; Validated 98.96
TIGR00901 356 2A0125 AmpG-related permease. 98.94
TIGR00896 355 CynX cyanate transporter. This family of proteins 98.92
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 98.88
PRK11902 402 ampG muropeptide transporter; Reviewed 98.86
TIGR00883 394 2A0106 metabolite-proton symporter. This model rep 98.86
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.84
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 98.81
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 98.81
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 98.8
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 98.78
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.77
KOG0569 485 consensus Permease of the major facilitator superf 98.76
PRK09848448 glucuronide transporter; Provisional 98.76
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 98.76
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.74
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.71
KOG2532 466 consensus Permease of the major facilitator superf 98.69
KOG2533 495 consensus Permease of the major facilitator superf 98.68
KOG0254 513 consensus Predicted transporter (major facilitator 98.66
KOG0637498 consensus Sucrose transporter and related proteins 98.65
COG2270438 Permeases of the major facilitator superfamily [Ge 98.62
KOG3810433 consensus Micronutrient transporters (folate trans 98.59
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 98.57
COG0477338 ProP Permeases of the major facilitator superfamil 98.55
PRK10429473 melibiose:sodium symporter; Provisional 98.55
PF13347428 MFS_2: MFS/sugar transport protein 98.55
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 98.55
PRK09669444 putative symporter YagG; Provisional 98.55
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 98.54
PF01306 412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.54
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 98.53
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 98.49
KOG2504 509 consensus Monocarboxylate transporter [Carbohydrat 98.47
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 98.45
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.45
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.4
KOG0252 538 consensus Inorganic phosphate transporter [Inorgan 98.37
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 98.37
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 98.36
KOG3762618 consensus Predicted transporter [General function 98.35
COG2211467 MelB Na+/melibiose symporter and related transport 98.35
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 98.31
KOG2325 488 consensus Predicted transporter/transmembrane prot 98.31
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 98.27
KOG2816 463 consensus Predicted transporter ADD1 (major facili 98.25
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.25
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 98.19
PRK11462460 putative transporter; Provisional 98.11
KOG3762618 consensus Predicted transporter [General function 98.11
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 98.04
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 98.01
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 97.87
COG2807 395 CynX Cyanate permease [Inorganic ion transport and 97.85
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 97.8
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 97.71
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 97.69
KOG2563 480 consensus Permease of the major facilitator superf 97.54
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 97.51
COG3202509 ATP/ADP translocase [Energy production and convers 97.47
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 97.47
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 97.42
KOG1479406 consensus Nucleoside transporter [Nucleotide trans 97.08
PF1283277 MFS_1_like: MFS_1 like family 96.96
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 96.66
KOG3626 735 consensus Organic anion transporter [Secondary met 96.61
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 96.59
COG0477 338 ProP Permeases of the major facilitator superfamil 96.2
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 96.17
PRK03612 521 spermidine synthase; Provisional 96.14
PF06963 432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 95.87
KOG3098461 consensus Uncharacterized conserved protein [Funct 95.84
KOG2881294 consensus Predicted membrane protein [Function unk 95.71
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 95.29
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 95.08
PRK03612521 spermidine synthase; Provisional 94.8
KOG0637 498 consensus Sucrose transporter and related proteins 94.64
KOG3880409 consensus Predicted small molecule transporter inv 94.23
PF1283277 MFS_1_like: MFS_1 like family 93.89
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 93.58
KOG3574 510 consensus Acetyl-CoA transporter [Inorganic ion tr 93.48
KOG3097390 consensus Predicted membrane protein [Function unk 92.71
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 92.48
KOG1479 406 consensus Nucleoside transporter [Nucleotide trans 92.36
PF03219 491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 90.48
KOG1237 571 consensus H+/oligopeptide symporter [Amino acid tr 90.39
COG5336116 Uncharacterized protein conserved in bacteria [Fun 88.21
PRK15015 701 carbon starvation protein A; Provisional 84.49
KOG3880409 consensus Predicted small molecule transporter inv 84.37
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-44  Score=318.95  Aligned_cols=389  Identities=30%  Similarity=0.509  Sum_probs=333.2

Q ss_pred             cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh---hchhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055            4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF---SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK   80 (396)
Q Consensus         4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~   80 (396)
                      .|..|.++|+++.|.++||+|||..+.++.++..++.++..+   .+++++++++|++.|+..|........|+.|..|+
T Consensus        68 ~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~  147 (485)
T KOG0569|consen   68 IFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPK  147 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChh
Confidence            456677888888999999999999999999988888777765   47899999999999999999999999999999999


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHhhhh------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhh-cCChHHHHHHHHH
Q 016055           81 NLRGGFTTVHQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFIPESPRWLAK-TGKGIESEAALQR  153 (396)
Q Consensus        81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~-~~~~~~~~~~~~~  153 (396)
                      +.||......+.+..+|..++..++.--      .|++.+.+..+++++.++...++||||||+.. +++++||++.++.
T Consensus       148 ~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~  227 (485)
T KOG0569|consen  148 NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKF  227 (485)
T ss_pred             hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHH
Confidence            9999999999999999999997766432      69999999999999999999999999999988 8999999999999


Q ss_pred             HhCCCcchHHHHHHHHHHHHHH-hhccchhHHHhhhhhh-hhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch--
Q 016055          154 LRGADADISEEAAEIREYTETL-ERLSEGGILELFQRKY-AHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS--  229 (396)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  229 (396)
                      .++.+++.++..++.++.++++ +++++.+++|+++++. ++...+.+.+....++.+.+...+|...++.+.|++..  
T Consensus       228 y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a  307 (485)
T KOG0569|consen  228 YRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEA  307 (485)
T ss_pred             HhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHH
Confidence            9988765544444333333332 2336778999999854 44566777788888999999999999999999998776  


Q ss_pred             -hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccc
Q 016055          230 -IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGM  308 (396)
Q Consensus       230 -~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (396)
                       ..+...++...+.++++.++.||.|||++++.+..++.+..+++.......+...  ++..+..+...+.+...+..|.
T Consensus       308 ~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~--~~~~y~~i~~~~~~~~~f~~G~  385 (485)
T KOG0569|consen  308 QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG--SWLSYLCIAAIFLFIISFAIGP  385 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhcCC
Confidence             7777888999999999999999999999999999999988888887665554331  2334556777888888899999


Q ss_pred             cchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecCCCCCCChHHH
Q 016055          309 GGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEI  388 (396)
Q Consensus       309 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (396)
                      .|+.+.+.+|++|++.|+.++++....+++..++-...+..+.+.-+...++.+.+.+.+..+..++.+||||+|+..|+
T Consensus       386 gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI  465 (485)
T KOG0569|consen  386 GPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLAIFLIYLYRYLPETKGRTPYEI  465 (485)
T ss_pred             CchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHhCcccCCCCHHHH
Confidence            99999999999999999999999999999999999999999999555588889999999999999999999999999888


Q ss_pred             HhhcCC
Q 016055          389 QASMNP  394 (396)
Q Consensus       389 ~~~~~~  394 (396)
                      .++.++
T Consensus       466 ~~~~~~  471 (485)
T KOG0569|consen  466 IEELEK  471 (485)
T ss_pred             HHHHHh
Confidence            777654

>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2881 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3097 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK15015 carbon starvation protein A; Provisional Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
4gby_A491 The Structure Of The Mfs (Major Facilitator Superfa 3e-33
>pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 Back     alignment and structure 
Iteration: 1

 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 171/362 (47%), Gaps = 37/362 (10%)
Query: 56  RLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------- 108
           R++ G G+GL S + P+YIAE+ P ++RG   + +Q  I  G  + Y +  F+       
Sbjct: 133 RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDAS 192
Query: 109 -----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGXXXXXXX 163
                 WR +     IP L+ L+ L  +PESPRWL   GK  ++E  L+++ G       
Sbjct: 193 WLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQA 252
Query: 164 XXXXXXXYTETLER-LSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNXXXXXXXXXXX 222
                     +L+     GG L +F       +++GV L + QQF G+N           
Sbjct: 253 VQEI----KHSLDHGRKTGGRLLMFG---VGVIVIGVMLSIFQQFVGINVVLYYAPEVFK 305
Query: 223 XXXXXXXXXXXXMV---VIQIPMTLLGVLLMDKSGRRPLLLVSXXXXXXXXXXXXXSFLF 279
                        +   VI +  T+L ++ +DK GR+PL ++              +F  
Sbjct: 306 TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAF-- 363
Query: 280 QDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLG 339
                + +A   +AL+ +L Y  +F++  G + WV++SE+FP  ++G A ++     WL 
Sbjct: 364 -----YTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLA 418
Query: 340 SWIISFTFNFLMKWS-------STGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASM 392
           ++ +S+TF  + K S       +  +++ +  +  L  LF+ K VPETKG+TLEE++A  
Sbjct: 419 NYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALW 478
Query: 393 NP 394
            P
Sbjct: 479 EP 480
  Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 100.0
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 100.0
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 100.0
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.96
2xut_A524 Proton/peptide symporter family protein; transport 99.95
2cfq_A417 Lactose permease; transport, transport mechanism, 99.94
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.46
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 99.44
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 99.42
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.34
2xut_A 524 Proton/peptide symporter family protein; transport 99.29
2cfq_A417 Lactose permease; transport, transport mechanism, 99.18
4gc0_A 491 D-xylose-proton symporter; MFS, transport protein; 99.09
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
Probab=100.00  E-value=3.2e-45  Score=339.04  Aligned_cols=379  Identities=29%  Similarity=0.522  Sum_probs=297.2

Q ss_pred             cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHH------------------hhchhhHHHHHHHHHHhhhhh
Q 016055            4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIV------------------FSKAAWWLDLGRLLVGYGMGL   65 (396)
Q Consensus         4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~~r~l~G~~~~~   65 (396)
                      ++..|.+++.+++|+++||+|||+++.++.+++.+++++++                  +++|+++++++|+++|++.|+
T Consensus        63 ~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~  142 (491)
T 4gc0_A           63 SALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGL  142 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence            45677888999999999999999999999999999999998                  478999999999999999999


Q ss_pred             cccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh------------hHHHHHHHhhHHHHHHHHHHhccCC
Q 016055           66 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------------NWRILALIGTIPCLVQLIGLCFIPE  133 (396)
Q Consensus        66 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l------------~wr~~f~~~~~~~~~~~~~~~~~~e  133 (396)
                      ..+...++++|+.|+++|++..++.+.+..+|.++++.++...            +||+.+.+..++.++..+..+++||
T Consensus       143 ~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  222 (491)
T 4gc0_A          143 ASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPE  222 (491)
T ss_dssp             HHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHHGGGSCC
T ss_pred             HHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhhhhhcCCC
Confidence            9999999999999999999999999999999999998887654            5999999999998888889999999


Q ss_pred             ChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhh
Q 016055          134 SPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGI  213 (396)
Q Consensus       134 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (396)
                      ||+|+..+++.|++++.+++...++...++..+..+. .+.  .++.......   ...++.........+.+....+..
T Consensus       223 Sp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  296 (491)
T 4gc0_A          223 SPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHS-LDH--GRKTGGRLLM---FGVGVIVIGVMLSIFQQFVGINVV  296 (491)
T ss_dssp             CHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHTTHHHH---SCCTHHHHHHHHHHHHHHTCHHHH
T ss_pred             ChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHH-HHh--hhhhhhHHHH---hcccHHHHHHHHHHHHHHhhhhHH
Confidence            9999999999999998888765433222111111111 111  1111111111   222344555566666677778888


Q ss_pred             HHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchh
Q 016055          214 AFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATP  290 (396)
Q Consensus       214 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (396)
                      .+|.+.+.+..+.+..   ......++..+++.++.+++.||+|||+.+..+.....++.+.+.......       ...
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~-------~~~  369 (491)
T 4gc0_A          297 LYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ-------APG  369 (491)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTT-------CCH
T ss_pred             HhcchHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcc-------cch
Confidence            8899998888777654   445666788889999999999999999998888877777766665432211       233


Q ss_pred             hHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-------hcccchhHHHH
Q 016055          291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-------WSSTGTFFAFS  363 (396)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-------~~~~~~~~~~~  363 (396)
                      ...+....++...+..+..|+.+.+.+|.+|++.|+++.|+.+..+++++++++.+.+.+.+       .+....+++++
T Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~  449 (491)
T 4gc0_A          370 IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYG  449 (491)
T ss_dssp             HHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence            44455555556666777888889999999999999999999999999999999998877644       23445677888


Q ss_pred             HHHHhhHhheeeecCCCCCCChHHHHhhcCCC
Q 016055          364 AICSLTVLFVAKLVPETKGRTLEEIQASMNPF  395 (396)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (396)
                      ++.++..++.++++||||+|+.||+++.+|+.
T Consensus       450 ~~~~~~~i~~~~~~PETkg~tLeei~~~f~~~  481 (491)
T 4gc0_A          450 CMGVLAALFMWKFVPETKGKTLEELEALWEPE  481 (491)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCCHHHHGGGTC--
T ss_pred             HHHHHHHHHHHheecCCCCCCHHHHHHHhCCC
Confidence            88888888888889999999999999887653
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 396
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 9e-09
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 54.7 bits (130), Expect = 9e-09
 Identities = 45/364 (12%), Positives = 102/364 (28%), Gaps = 17/364 (4%)

Query: 28  TMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFT 87
            +  +  V +    +   + +   + +   L G+  G+        +     +  RGG  
Sbjct: 95  GLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIV 154

Query: 88  TVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIES 147
           +V      +G  +  L+              +        L  +             +  
Sbjct: 155 SVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALF--------AFAMMRD 206

Query: 148 EAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQF 207
                 L   +   ++   +  E  E      +  +  +   K    + +    + L ++
Sbjct: 207 TPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRY 266

Query: 208 GGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTC 267
           G ++    Y   +   A    S          IP TLL   + DK  R            
Sbjct: 267 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMT 326

Query: 268 LGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGS 327
           L  +   + ++       +        +  ++  G    G   +  +   E+ P    G+
Sbjct: 327 LVTIATIVYWMNPAGNPTV-------DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGT 379

Query: 328 AGSLVTLVSWLGSWIISFTFNFLM--KWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTL 385
           A     L  +LG  + +          +   G F        L V+ +  ++   K R  
Sbjct: 380 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHE 439

Query: 386 EEIQ 389
           + +Q
Sbjct: 440 QLLQ 443

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 100.0
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.94
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 99.41
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.27
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.1e-34  Score=259.11  Aligned_cols=350  Identities=13%  Similarity=0.068  Sum_probs=229.6

Q ss_pred             cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh----chhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055            4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS----KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP   79 (396)
Q Consensus         4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~   79 (396)
                      .+..+..++.+++|+++||+|||+++..+.++.+++.++++++    ++++.+++.|++.|++.+...+...+++.|++|
T Consensus        67 ~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~  146 (447)
T d1pw4a_          67 GISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWS  146 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Confidence            3556777888899999999999999999999999999998876    478899999999999999999999999999999


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHH
Q 016055           80 KNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQR  153 (396)
Q Consensus        80 ~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~  153 (396)
                      +++|++++++.+.+.++|..+++.++...     +||+.|++.+.+.++..+ ...+.+|+|+.......+++.+     
T Consensus       147 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  221 (447)
T d1pw4a_         147 QKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKN-----  221 (447)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCC-----
T ss_pred             hhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhh-----
Confidence            99999999999999999999999877765     899999988777666544 4555666664322211111100     


Q ss_pred             HhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch---
Q 016055          154 LRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS---  229 (396)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---  229 (396)
                            +.   .++..+..+.+...++...++.++++..+.......+...    .......+.+.+..+ .+.+..   
T Consensus       222 ------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  288 (447)
T d1pw4a_         222 ------DY---PDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYL----LRYGILDWSPTYLKEVKHFALDKSS  288 (447)
T ss_dssp             ------C----------------CCTHHHHHHTSSCHHHHHHHHHHHHHHH----HHHHHHHHHHHHBTTBSCCCHHHHH
T ss_pred             ------hc---ccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhh----hhhcchhhhhhhcccccccccchhh
Confidence                  00   0000111111112223334455555444433333322222    234444555555544 455554   


Q ss_pred             hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055          230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG  309 (396)
Q Consensus       230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (396)
                      .......+..+++.++.|++.||.+|++.....................       ....+........+..++...+..
T Consensus       289 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~  361 (447)
T d1pw4a_         289 WAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWM-------NPAGNPTVDMICMIVIGFLIYGPV  361 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTS-------CCTTCHHHHHHHHHHHHHHHTHHH
T ss_pred             hhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHh-------cccccHHHHHHHHHHHHHHHHHHH
Confidence            5566667888999999999999999876443333332222222221100       012223333344444455555666


Q ss_pred             chhhhhhcccCCcCcchhhhHHHHHHHHH-HHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecC
Q 016055          310 GIPWVIMSEVFPINMKGSAGSLVTLVSWL-GSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVP  378 (396)
Q Consensus       310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (396)
                      +....+..|.+|++.|+++.|+.+...++ |..++|.+.|.+.| .++...+....++..+..++...+.+
T Consensus       362 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  432 (447)
T d1pw4a_         362 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI  432 (447)
T ss_dssp             HHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67778999999999999999999999887 45678999999999 45555555555555555444443333
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure