Citrus Sinensis ID: 016095

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-----
Protein Sequence
MSMSMSISMSNNNDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSRSTTRPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSDVAAVLGLSKQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVALSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLHLQELQPQSLNLLATPLPAAFSDRLWEWNPILEASREYNDPFK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccEEEEcccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccEEEcccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHccccccEEEEEccccccccccccccccccccEEEEccccccEccccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccHHHHcccccccccccccccccccccccccccccHHHHHHcccccHHHHHHccccccccccccccccccccccccccccccccHHHcccccccccccccccccc
Coil and Loop (DISEMBL)
msmsmsismsnnndsknddhehdvvmpgfrfhpteEELVEFYLRRKVEGKRFNVELITfldlyrydpwelpalaavgekewffyvprdrkyrngdrpnrvttsgywkatgadrmiksensrsiglkktlvfysgkapkgirtswimneyrlpqheTERYQKAEISLCrvhkrpgvedhtslprclptskasssrtgssrsttrpdkilyYHHRRHGierlqgfggqsshqQMEMVTdekmstntdqtdgsssscsDVAAVLGLskqnvyrpnmASITTsllglpssiMEEQAAAstlvpscttttlfpvalsssssssliysdaadefhglltypqasmnhhqqyynidhhlhlqelqpqslnllatplpaafsDRLWEWNPILEASREYNDPFK
Flexible Loop (DISEMBL)
MSMSMSISMSnnndsknddHEHDVVMPGFRFHPTEEELVEFYLrrkvegkrfNVELITFLDLYRYDPWELPALaavgekewffyvprdrkyrngdrpnrvttsgywkatgadrmiksensrsiglkktlvfysgkapkgirtswimNEYRLPQHETERYQKAEISLCRVHkrpgvedhtslprclptskasssrtgssrsttrpdkilYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSDVAAVLGLSKQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVALSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLHLQELQPQSLNLLATPLPAAFSDRLWEWNPILeasreyndpfk
Low Complexity Region (SEG)
msmsmsismsnnndsknddHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKAsssrtgssrsttrPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSDVAAVLGLSKQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVALsssssssLIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLHLQELQPQSLNLLATPLPAAFSDRLWEWNPILEASREYNDPFK
Disordered region (IsUnstruct)
************************VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRN*****RVTTSGYWKATGADRMI******SIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRV*************************************ILYYHHRRHGIE***************************************AAVLGLSKQNVYRPNMASITTSLLGLP**I*****AASTLVPSCTTTTLFPVAL*******LIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLHLQELQPQSLNLLATPLPAAFSDRLWEWNPILE**********
Disordered Region (DISOPRED)
**************************PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQ*****YQKAEISLCRVHK**********************************************************************************************************************************************************************************************************SDRLWEWNPILEASR*******
Disordered Region (DISEMBL)
******************DHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPR******************TRPDKILYYHHRRHGIERLQGF*********EMVTDE*****************DVAAVLGLSKQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVA********LIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLHLQELQPQSLNLLATPLPAAFSDRLWEWNPILEASREYNDPFK
Disordered Region (DISPRO)
***********************VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPG********************************************RLQG*GG**SH*QMEMVTDEKMSTNTDQTDGSSSSCSDVAAVLGLSKQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVALSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLHLQELQPQSLNLLATPLPAAFSDRLWEWNPILEASR*Y*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSMSMSISMSNNNDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSRSTTRPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSDVAAVLGLSKQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVALSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLHLQELQPQSLNLLATPLPAAFSDRLWEWNPILEASREYNDPFK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	395	2.2.26 [Sep-21-2011]
Q9FIW5	337	Putative NAC domain-conta	no	no	0.448	0.525	0.485	8e-51
Q9ZVH0	418	Protein FEZ OS=Arabidopsi	no	no	0.402	0.380	0.537	6e-50
Q9SK55	275	Transcription factor JUNG	no	no	0.402	0.578	0.539	2e-46
Q93VY3	297	NAC domain-containing pro	no	no	0.367	0.488	0.560	5e-46
Q9LDY8	317	NAC domain-containing pro	no	no	0.367	0.457	0.567	1e-45
Q9C932	317	NAC domain-containing pro	no	no	0.367	0.457	0.567	3e-45
Q8H115	312	NAC domain-containing pro	no	no	0.445	0.564	0.478	7e-45
Q8GY42	323	NAC transcription factor	no	no	0.410	0.501	0.508	8e-45
Q39013	289	NAC domain-containing pro	no	no	0.389	0.532	0.530	3e-44
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.435	0.607	0.470	4e-44

>sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=4 SV=1

 Score =  201 bits (511), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 98/202 (48%), Positives = 132/202 (65%), Gaps = 25/202 (12%)

Query: 7   ISMSNNNDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYD 66
           + + ++ +S N +   DVV+PGFRFHPT+EELV FYL+RKV  K    +LI  +D+Y+YD
Sbjct: 2   VLVMDDEESNNVERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYD 61

Query: 67  PWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKS-ENSRSIGL 125
           PW+LP LAA+GEKEW+FY PRDRKYRN  RPNRVT  G+WKATG DR I S +++R IGL
Sbjct: 62  PWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGL 121

Query: 126 KKTLVFYSGKAPKGIRTSWIMNEYRLP-----------------QHETERYQKAEI---- 164
           KK+LVFY G+A KG++T W+M+E+RLP                 QH        E+    
Sbjct: 122 KKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSND 181

Query: 165 --SLCRVHKRP-GVEDHTSLPR 183
             ++CR+ K+   V    S+P+
Sbjct: 182 AWAICRIFKKTNAVSSQRSIPQ 203

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVH0|FEZ_ARATH Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1

 Score =  198 bits (504), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 93/173 (53%), Positives = 123/173 (71%), Gaps = 14/173 (8%)

Query: 12  NNDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELP 71
           NND   D    DV++PGFRFHPT+EELV FYL+RKV+    ++ELI  LD+Y+YDPW+LP
Sbjct: 5   NNDG--DQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLP 62

Query: 72  ALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI-KSENSRSIGLKKTLV 130
             A  GEKEW+FY PRDRKYRN  RPNRVT +G+WKATG DR I  SE ++ IGLKK+LV
Sbjct: 63  KFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLV 122

Query: 131 FYSGKAPKGIRTSWIMNEYR-----LPQHETERYQKAEIS------LCRVHKR 172
           FY G+A KG++T W+M+E+R      P   ++R+  + +S      +CR+ K+
Sbjct: 123 FYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKK 175

Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SK55|NAC42_ARATH Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana GN=JUB1 PE=1 SV=1

 Score =  187 bits (474), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/163 (53%), Positives = 120/163 (73%), Gaps = 4/163 (2%)

Query: 13  NDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPA 72
           N  K+ + E++  +PGFRFHPT+EEL+ +YLRRKVE K   +ELI  +D+Y+YDPW+LP 
Sbjct: 6   NLGKDHEEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPR 65

Query: 73  LAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFY 132
           +++VGEKEW+F+  R RKYRN  RPNRVT SG+WKATG D+ + S N   +GLKK+LV+Y
Sbjct: 66  VSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYS-NLDCVGLKKSLVYY 124

Query: 133 SGKAPKGIRTSWIMNEYRLPQ--HETERYQKAEI-SLCRVHKR 172
            G A KG +T W+M+E+RLP         Q+AE+ +LCR+ KR
Sbjct: 125 LGSAGKGTKTDWMMHEFRLPSTTKTDSPAQQAEVWTLCRIFKR 167

Arabidopsis thaliana (taxid: 3702)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score =  185 bits (470), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 112/148 (75%), Gaps = 3/148 (2%)

Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRF+PT+EEL+  YL RKV G  F++++I  +DLY++DPW+LP+ A  GEKEW+F+ P
Sbjct: 16  PGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSP 75

Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNRV  SGYWKATG D++I ++  R +G+KK LVFY+GKAPKG +T+WIM
Sbjct: 76  RDRKYPNGSRPNRVAGSGYWKATGTDKIITADG-RRVGIKKALVFYAGKAPKGTKTNWIM 134

Query: 147 NEYRLPQHETERYQKA--EISLCRVHKR 172
           +EYRL +H          +  LCR++K+
Sbjct: 135 HEYRLIEHSRSHGSSKLDDWVLCRIYKK 162

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score =  184 bits (466), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 109/148 (73%), Gaps = 3/148 (2%)

Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP+ A  GEKEW+F+ P
Sbjct: 16  PGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSP 75

Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 76  RDRKYPNGSRPNRVAGSGYWKATGTDKVISTE-GRRVGIKKALVFYIGKAPKGTKTNWIM 134

Query: 147 NEYRL--PQHETERYQKAEISLCRVHKR 172
           +EYRL  P       +  +  LCR++K+
Sbjct: 135 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 162

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score =  182 bits (463), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 108/148 (72%), Gaps = 3/148 (2%)

Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 16  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 75

Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 76  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 134

Query: 147 NEYRL--PQHETERYQKAEISLCRVHKR 172
           +EYRL  P       +  +  LCR++K+
Sbjct: 135 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 162

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score =  181 bits (460), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 89/186 (47%), Positives = 122/186 (65%), Gaps = 10/186 (5%)

Query: 28  GFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPR 87
           GFRFHPT+EELV+FYL R+   +  NV +I  +DLY+++PWELP +A  GEKEW+F+  R
Sbjct: 53  GFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHR 112

Query: 88  DRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMN 147
           DRKY NG RPNR   +GYWKATGAD+ I     +++G+KK LVFY+GKAPKGI+T+WIM+
Sbjct: 113 DRKYPNGSRPNRAAGTGYWKATGADKPIGK--PKTLGIKKALVFYAGKAPKGIKTNWIMH 170

Query: 148 EYRLPQ-------HETERYQKAEISLCRVHKRPG-VEDHTSLPRCLPTSKASSSRTGSSR 199
           EYRL         ++    +  +  LCR++ + G +E +       PT K S+S +  S 
Sbjct: 171 EYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPAAAEKPTEKMSTSDSRCSS 230

Query: 200 STTRPD 205
               PD
Sbjct: 231 HVISPD 236

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  181 bits (459), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 91/179 (50%), Positives = 114/179 (63%), Gaps = 17/179 (9%)

Query: 9   MSNNNDSK-NDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDP 67
           M N  DS     H H  + PGFRFHPT+EELV  YL++K +     V +I  +DLY++DP
Sbjct: 1   MENMGDSSIGPGHPH--LPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDP 58

Query: 68  WELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKK 127
           WELP+ A+ GE EW+F+ PRDRKY NG RPNR  TSGYWKATG D+ I + NS  +G+KK
Sbjct: 59  WELPSKASFGEHEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKK 118

Query: 128 TLVFYSGKAPKGIRTSWIMNEYRL-----------PQHETERYQKAEIS---LCRVHKR 172
            LVFY GK PKGI+T WIM+EYRL           P   T R     +    LCR++K+
Sbjct: 119 ALVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKK 177

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score =  179 bits (455), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 86/162 (53%), Positives = 108/162 (66%), Gaps = 8/162 (4%)

Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRFHPT+EELV  YL RK   +   V +I  +DLY+YDPWELP LA  GEKEW+F+ P
Sbjct: 9   PGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSP 68

Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNR   SGYWKATGAD+ I     + +G+KK LVFY+GKAPKG +T+WIM
Sbjct: 69  RDRKYPNGSRPNRSAGSGYWKATGADKPIGL--PKPVGIKKALVFYAGKAPKGEKTNWIM 126

Query: 147 NEYRLPQHETERYQKA------EISLCRVHKRPGVEDHTSLP 182
           +EYRL   +    +K       +  LCR++ + G  +    P
Sbjct: 127 HEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPP 168

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score =  179 bits (453), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 87/185 (47%), Positives = 122/185 (65%), Gaps = 13/185 (7%)

Query: 28  GFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPR 87
           GFRFHPT+EELV+FYL RK   ++ +  +I  +DLY+++PWELP ++  GEKEW+F+ PR
Sbjct: 10  GFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSLYGEKEWYFFSPR 69

Query: 88  DRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMN 147
           DRKY NG RPNR   +GYWKATGAD+ I     +++G+KK LVFY+GKAPKGI+T+WIM+
Sbjct: 70  DRKYPNGSRPNRAAGTGYWKATGADKPIG--KPKTLGIKKALVFYAGKAPKGIKTNWIMH 127

Query: 148 EYRLPQ-------HETERYQKAEISLCRVHKRPGVEDH----TSLPRCLPTSKASSSRTG 196
           EYRL         ++    +  +  LCR++ + G  +        PR    ++ SSS   
Sbjct: 128 EYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEKYFPADEKPRTTTMAEQSSSPFD 187

Query: 197 SSRST 201
           +S ST
Sbjct: 188 TSDST 192

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	395
356564436	403	PREDICTED: uncharacterized protein LOC10	0.878	0.861	0.583	1e-116
356520139	400	PREDICTED: putative NAC domain-containin	0.918	0.907	0.567	1e-115
225465304	377	PREDICTED: protein FEZ [Vitis vinifera]	0.916	0.960	0.593	1e-113
255556683	421	NAC domain-containing protein, putative	0.875	0.821	0.601	1e-113
224129830	382	NAC domain protein, IPR003441 [Populus t	0.855	0.884	0.615	1e-111
224070774	312	NAC domain protein, IPR003441 [Populus t	0.746	0.945	0.583	1e-105
217074048	434	unknown [Medicago truncatula]	0.886	0.806	0.548	1e-102
388511087	434	unknown [Medicago truncatula]	0.886	0.806	0.546	1e-101
449478299	311	PREDICTED: protein FEZ-like [Cucumis sat	0.455	0.578	0.895	8e-92
449432952	326	PREDICTED: protein FEZ-like [Cucumis sat	0.455	0.552	0.895	1e-91

>gi|356564436|ref|XP_003550460.1| PREDICTED: uncharacterized protein LOC100792622 [Glycine max]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/391 (58%), Positives = 271/391 (69%), Gaps = 44/391 (11%)

Query: 17  NDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAV 76
           NDDHEHD+VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAA+
Sbjct: 38  NDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAI 97

Query: 77  GEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKA 136
           GEKEW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++EN RSIGLKKTLVFYSGKA
Sbjct: 98  GEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKA 157

Query: 137 PKGIRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTG 196
           PKGIRTSWIMNEYRLPQHETERYQKAEISLCRV+KR GVEDH SLPRCLPT + SSSR  
Sbjct: 158 PKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRCLPT-RPSSSRAS 216

Query: 197 SSRSTTRPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSD 256
              +    + +      +H I    GF GQ      E + D+      ++T+ S    SD
Sbjct: 217 HDNNKKHNEMV------QHNIN--MGFVGQLKPPTTEHIVDK-----INETEAS----SD 259

Query: 257 VAAVLGLSKQN-VYRPNMASITTSLLGLPSSIMEEQAAASTL-----VPSCTTTTLFPVA 310
           V   LGLSK N  YR  M +++T+ + LP   M+ +     +       +    T+F   
Sbjct: 260 VNTALGLSKYNAAYRAAMGALSTT-MALPVVPMDHEEGLMMMQQQSKQAAAHVPTIFSAG 318

Query: 311 LSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLHLQE-----LQPQ---SL 362
            SSS++S ++     D+ + L++Y        QQYYN+    H  +     +QP    SL
Sbjct: 319 PSSSNNSGVV---NMDDLNRLMSY-------QQQYYNVQSQSHPNQFSTLLMQPSAVVSL 368

Query: 363 NLLATPLPAAFSDRLWEWNPILE-ASREYND 392
           + L  PLP  FSDRLW+WNPI E  ++EY++
Sbjct: 369 SSLPNPLPPTFSDRLWDWNPIPEPPNQEYSN 399

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520139|ref|XP_003528722.1| PREDICTED: putative NAC domain-containing protein 94-like [Glycine max]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/414 (56%), Positives = 284/414 (68%), Gaps = 51/414 (12%)

Query: 1   MSMSMSISMSN--NNDSK----NDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNV 54
           MS+S S S  +   ND+K    +DDHEHD+VMPGFRFHPTEEELVEFYLRRKVEGKRFNV
Sbjct: 12  MSLSHSQSQEDATTNDNKPVVVDDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNV 71

Query: 55  ELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRM 114
           ELITFLDLYRYDPWELPALAA+GEKEW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADRM
Sbjct: 72  ELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRM 131

Query: 115 IKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPG 174
           I++EN RSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRV+KR G
Sbjct: 132 IRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAG 191

Query: 175 VEDHTSLPRCLPTSKASSSRTG----SSRSTTRPDKILYYHHRRHGIERLQGFGGQSSHQ 230
           VEDH SLPRCLPT  +SSSR      ++  +T+ ++++ +H+         GF GQS   
Sbjct: 192 VEDHPSLPRCLPTRPSSSSRASSDHINNNKSTKHNEMVQHHNIN------MGFMGQSKPP 245

Query: 231 QMEMVTDEKMSTNTDQTDGSSSSCSDVAAVLGLSKQNVYRPNMASITTSLLGLP---SSI 287
             E + D+            S + SDV   LGLSK N YR    + T +L  +P    ++
Sbjct: 246 TTEHIVDKI---------NESEASSDVNTTLGLSKYNAYR----AATMALPVVPMDEEAL 292

Query: 288 MEEQAAASTLVPSCTTTTLFPVALSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYN 347
           M  Q +      +    T+F    SSS++S ++     D+ + L++Y         QYYN
Sbjct: 293 MMMQQSKQAAAAAAHVPTIFSAGPSSSNNSGVV---NMDDLNRLMSY-------QHQYYN 342

Query: 348 IDHHLHLQE-----LQPQ---SLNLLATPLPAAFSDRLWEWNPILEA-SREYND 392
           +    H  +     +QP    SL+ L  PLP  FSDRLW+WNPI E+ S+EY++
Sbjct: 343 VQSQSHPNQFSTLLMQPSPIVSLSSLPNPLPPTFSDRLWDWNPIPESPSQEYSN 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465304|ref|XP_002271971.1| PREDICTED: protein FEZ [Vitis vinifera]

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/406 (59%), Positives = 275/406 (67%), Gaps = 44/406 (10%)

Query: 5   MSISMSNNNDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYR 64
           M+I+ + + +   D+HEHD+VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELIT LDLYR
Sbjct: 1   MAIAANMSQEDNKDEHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITSLDLYR 60

Query: 65  YDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIG 124
           YDPWELPALAA+GEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++EN R IG
Sbjct: 61  YDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRPIG 120

Query: 125 LKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRC 184
           LKKTLVFYSGKAPKGIRTSWIMNEYRLPQ ETER QKAEISLCRV+KR GVEDH S    
Sbjct: 121 LKKTLVFYSGKAPKGIRTSWIMNEYRLPQQETERSQKAEISLCRVYKRAGVEDHPS--LP 178

Query: 185 LPTSKASSSRTGSSRSTTRPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNT 244
                  SS  G      + D        +H IER Q FGGQS  QQ+EM   EKM    
Sbjct: 179 RSLPSRPSSSRGLQADKRQQDAA------QHAIERFQAFGGQS--QQVEM---EKM---I 224

Query: 245 DQTDGSSSSCSDVAAVLGLSKQNVYRPNMASITTSLLGLPSSIMEE-------QAAASTL 297
            +++GSSS  +DV   LGLS+QN Y        ++ L  P+   E+       + A S +
Sbjct: 225 GESEGSSS--TDVTTALGLSQQNAY--GAIPALSATLAPPAPEEEDRLLLHHSKQACSLV 280

Query: 298 VPSCTTTTLFPVALSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYN----IDHHLH 353
            P+C  TTLF       + SS +   A D+ H L+ Y QAS+N  QQY+N      H   
Sbjct: 281 PPAC--TTLF-------TGSSSLPPHAVDDLHRLVNYQQASINQQQQYHNNPNQPSHQFS 331

Query: 354 L----QELQPQSLNLLATPLPAAFSDRLWEWNPILEASREYNDPFK 395
                Q  Q  +LN L   L AAFSDRLWEWNPI EASR+YN PFK
Sbjct: 332 TLPVPQSSQSLALNTLPGSLQAAFSDRLWEWNPIPEASRDYNSPFK 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556683|ref|XP_002519375.1| NAC domain-containing protein, putative [Ricinus communis] gi|223541442|gb|EEF42992.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 243/404 (60%), Positives = 277/404 (68%), Gaps = 58/404 (14%)

Query: 24  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFF 83
           +VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAA+GEKEWFF
Sbjct: 44  MVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 103

Query: 84  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 143
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI+SENSRSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 104 YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENSRSIGLKKTLVFYSGKAPKGIRTS 163

Query: 144 WIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSRSTTR 203
           WIMNEYRLPQHETERYQKAEISLCRV+KR GVEDH SLPR L +  +SS    S +    
Sbjct: 164 WIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRSLSSRASSSRGLQSDKKLQP 223

Query: 204 PDKILYYHHRRHGIERLQGF--GGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSDVAAVL 261
           P         + G+E  Q F  GGQS  QQ+E+   EK+S    +TDGSSS  SDV   L
Sbjct: 224 P---------QLGMESFQVFGGGGQSISQQIEL---EKISA---ETDGSSS--SDVTTAL 266

Query: 262 GLSK-QNVYRPNMASITTSLLGLPSSI--------MEEQAAASTLVPSCTTTTLFPVALS 312
           GLSK  NVY P + +I+TS LGLP++I        + +   A +LVP+     LF     
Sbjct: 267 GLSKPANVYHP-VPAISTS-LGLPATIEEEAEEIFLNQSRQACSLVPNNNNNNLF----- 319

Query: 313 SSSSSSLIYSDAADEFHGLLTY-PQASMNHHQQYYNIDHHL-------------HLQELQ 358
             + SS + S+  D+ H L+ Y         QQYYN  HH                  + 
Sbjct: 320 --TGSSSVSSNPVDDLHRLVNYQQACISQQQQQYYNTHHHQHHQQQQQQQHQHSQFSIMA 377

Query: 359 PQS----LNLLATPLPAAFSDRLWEWNPILEASRE---YNDPFK 395
           PQS    LN+L   LP AF +RLWEWNP+ EA+R+    N+PFK
Sbjct: 378 PQSQSLALNMLPNSLPTAFPERLWEWNPLPEANRDQYNVNNPFK 421

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129830|ref|XP_002328813.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222839111|gb|EEE77462.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 240/390 (61%), Positives = 279/390 (71%), Gaps = 52/390 (13%)

Query: 24  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFF 83
           +VMPGFRF PTEEEL+EFYLRRKVEGK FNVELITFLDLY YDPWELPALAA+GEKEWFF
Sbjct: 27  MVMPGFRFRPTEEELIEFYLRRKVEGKHFNVELITFLDLYSYDPWELPALAAIGEKEWFF 86

Query: 84  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 143
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++ENSRSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 87  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAENSRSIGLKKTLVFYSGKAPKGIRTS 146

Query: 144 WIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSRSTTR 203
           WIMNEYRLPQHETERYQKAEISLC V+KR G+EDH SLPR +P S+ASSSR       T+
Sbjct: 147 WIMNEYRLPQHETERYQKAEISLCCVYKRAGIEDHPSLPRSIP-SRASSSR------GTQ 199

Query: 204 PDKILYYHHRRH-GIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSDVAAVLG 262
            DK     H+ H  ++  Q F GQSS QQ+EM   EKMS    +TD S S  SDV   LG
Sbjct: 200 SDK----KHQSHVTVKGFQPFLGQSS-QQIEM---EKMS----ETDASGS--SDVTTALG 245

Query: 263 LSKQNV--YRPNMASITTSLLGLPSSIME-------EQAAASTLVPSCTTTTLFPVALSS 313
           LS+ N+  Y P    I+TS + LP+S+ E       +QAA+S LVP+C    LF V  +S
Sbjct: 246 LSQHNINAYHP----ISTS-IELPASVEEGMFLNQTKQAASSFLVPNC--PNLFTV--TS 296

Query: 314 SSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYNIDHHLH----LQELQPQS----LNLL 365
           S SS+ +Y    D+ H L+ Y QA +   QQ        H    L  + PQS     N+L
Sbjct: 297 SVSSNPVY----DDLHRLINYQQADIGQQQQQQFYLLQQHQPSPLSSMAPQSQSLPFNML 352

Query: 366 ATPLPAAFSDRLWEWNPILEASREYNDPFK 395
              LP  F DR+W+WN + E++R+YN+PFK
Sbjct: 353 PNLLPTTFPDRIWDWNQMPESNRDYNNPFK 382

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224070774|ref|XP_002303230.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222840662|gb|EEE78209.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/389 (58%), Positives = 250/389 (64%), Gaps = 94/389 (24%)

Query: 24  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFF 83
           +VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAA+GEKEWFF
Sbjct: 1   MVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 60

Query: 84  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 143
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++ENSRSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 61  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENSRSIGLKKTLVFYSGKAPKGIRTS 120

Query: 144 WIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSRSTTR 203
           WIMNEYRLP HETERYQK EISLCRV+KR GVEDH SLPR LP S+ASSSR   S     
Sbjct: 121 WIMNEYRLPHHETERYQKVEISLCRVYKRAGVEDHPSLPRSLP-SRASSSRGPQS----- 174

Query: 204 PDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSDVAAVLGL 263
            DK    H     +ER Q F GQSS QQ+EM   EKMS    +TD SSS  SDV      
Sbjct: 175 -DK---KHQSHLTLERFQPFVGQSS-QQIEM---EKMS----ETDASSS--SDV------ 214

Query: 264 SKQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVALSSSSSSSLIYSD 323
                         T+ LGL    +                                   
Sbjct: 215 --------------TTALGLSKHNI----------------------------------- 225

Query: 324 AADEFHGLLTYPQASMNHHQQ--------YYNIDHHLH----LQELQPQS-----LNLLA 366
             D+ H LL Y QAS+NHH          +Y +    H    L  + PQ+     LN+L 
Sbjct: 226 --DDLHRLLNYQQASINHHHHQQQQQQQQFYLLQQPQHQSSQLSSMTPQTSQQLPLNMLP 283

Query: 367 TPLPAAFSDRLWEWNPILEASREYNDPFK 395
             LP  F DRLWEWN + EA+R++N+PFK
Sbjct: 284 ELLPPTFPDRLWEWNQMPEANRDFNNPFK 312

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074048|gb|ACJ85384.1| unknown [Medicago truncatula]

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/388 (54%), Positives = 259/388 (66%), Gaps = 38/388 (9%)

Query: 20  HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEK 79
           HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAA+GEK
Sbjct: 49  HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK 108

Query: 80  EWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKG 139
           EW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADR I++EN RSIGLKKTLVFYSGKAPKG
Sbjct: 109 EWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRTIRTENFRSIGLKKTLVFYSGKAPKG 168

Query: 140 IRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSR 199
           IRTSWIMNEYRLPQHETERYQK EISLCRV+KR GVEDH SLPRCLP ++ SSS +    
Sbjct: 169 IRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSSSSRGT 228

Query: 200 STTRPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSD--V 257
           + +  DK    + +++ I  +    GQS         D+ +    ++ +GSSS  +   V
Sbjct: 229 TASHSDK----NKQQNEILGMGFVVGQSPK-----TIDDHI---VNKMEGSSSGGNSDHV 276

Query: 258 AAVLGLSKQNVYRPNMASITTSLLGL---------PSSIMEEQAAASTLVPSC--TTTTL 306
              LGLSK +   P     +    GL         P  +++  AA ++L+ S       +
Sbjct: 277 TTTLGLSKYSNTPPPTNYRSEEEEGLMIMQQQQHQPRHLVQYSAAGNSLLVSAGGGGGVI 336

Query: 307 FP-----VALSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYNIDH----HLHLQEL 357
           FP      A  S S+++   +   D+ + L++Y Q    ++ Q  +++H    HL    +
Sbjct: 337 FPVSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQQQYCYNVQNPHLNHPNPNHLSTLLM 396

Query: 358 QPQSLNLLATPLPAAFSDRLWEWNPILE 385
           QP    +L    P  FSDRLW+WNPI E
Sbjct: 397 QP----MLPNQFPTTFSDRLWDWNPIPE 420

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511087|gb|AFK43609.1| unknown [Medicago truncatula]

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/388 (54%), Positives = 257/388 (66%), Gaps = 38/388 (9%)

Query: 20  HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEK 79
           HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAA+GEK
Sbjct: 49  HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK 108

Query: 80  EWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKG 139
           EW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADR I++EN RSIGLKKTLVFYSGKAPKG
Sbjct: 109 EWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRTIRTENFRSIGLKKTLVFYSGKAPKG 168

Query: 140 IRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSR 199
           IRTSWIMNEYRLPQHETERYQK EISLCRV+KR GVEDH SLPRCLP ++ SSS +    
Sbjct: 169 IRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSSSSRGT 228

Query: 200 STTRPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSD--V 257
           + +  DK    + +++ I  +    GQS         D+ +    ++ +GSSS  +   V
Sbjct: 229 TASHSDK----NKQQNEILGMGFVVGQSPK-----TIDDHI---VNKMEGSSSGGNSDHV 276

Query: 258 AAVLGLSKQNVYRPNMASITTSLLGL---------PSSIMEEQAAASTLVPSC--TTTTL 306
              LGLSK +   P     +    GL         P  +++  AA ++L+ S       +
Sbjct: 277 TTTLGLSKYSNTPPPTNYRSEEEEGLMIMQQQQHQPRHLVQYSAAGNSLLVSAGGGGGVI 336

Query: 307 FP-----VALSSSSSSSLIYSDAADEFHGLLTYPQASMNHHQQYYNIDH----HLHLQEL 357
           FP      A  S S+++   +   D+ + L++Y Q    ++ Q  + +H    HL    +
Sbjct: 337 FPVSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQQQYCYNVQNPHFNHPNPNHLFTLLM 396

Query: 358 QPQSLNLLATPLPAAFSDRLWEWNPILE 385
           QP    +L    P  F DRLW+WNPI E
Sbjct: 397 QP----MLPNQFPTTFFDRLWDWNPIPE 420

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478299|ref|XP_004155277.1| PREDICTED: protein FEZ-like [Cucumis sativus]

 Score =  343 bits (880), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 162/181 (89%), Positives = 170/181 (93%), Gaps = 1/181 (0%)

Query: 24  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFF 83
           VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAA+GEKEWFF
Sbjct: 47  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 106

Query: 84  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 143
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++E+ RSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 107 YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTEDFRSIGLKKTLVFYSGKAPKGIRTS 166

Query: 144 WIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSRSTTR 203
           WIMNEYRLP HETERYQKAEISLCRV+KR GVEDH SLPR LP S+ASSSR  SS++   
Sbjct: 167 WIMNEYRLPHHETERYQKAEISLCRVYKRAGVEDHPSLPRSLP-SRASSSRMTSSKNNLL 225

Query: 204 P 204
           P
Sbjct: 226 P 226

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432952|ref|XP_004134262.1| PREDICTED: protein FEZ-like [Cucumis sativus]

 Score =  343 bits (879), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 162/181 (89%), Positives = 170/181 (93%), Gaps = 1/181 (0%)

Query: 24  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFF 83
           VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAA+GEKEWFF
Sbjct: 26  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 85

Query: 84  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 143
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++E+ RSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 86  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTEDFRSIGLKKTLVFYSGKAPKGIRTS 145

Query: 144 WIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSRSTTR 203
           WIMNEYRLP HETERYQKAEISLCRV+KR GVEDH SLPR LP S+ASSSR  SS++   
Sbjct: 146 WIMNEYRLPHHETERYQKAEISLCRVYKRAGVEDHPSLPRSLP-SRASSSRMTSSKNNLL 204

Query: 204 P 204
           P
Sbjct: 205 P 205

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	395
TAIR|locus:2056266	414	LOV1 "LONG VEGETATIVE PHASE 1"	0.913	0.871	0.513	8.3e-90
TAIR|locus:2202820	418	FEZ "FEZ" [Arabidopsis thalian	0.329	0.311	0.648	2.9e-50
TAIR|locus:2827676	276	NAC036 "NAC domain containing	0.372	0.532	0.559	1.1e-46
TAIR|locus:2045570	275	NAC042 "NAC domain containing	0.407	0.585	0.542	5.6e-45
TAIR|locus:2167155	476	NAC086 "NAC domain containing	0.377	0.313	0.529	8.6e-45
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.367	0.229	0.533	4.8e-44
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.367	0.457	0.567	1.3e-43
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.367	0.457	0.567	2.8e-43
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.389	0.532	0.537	1.5e-42
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.329	0.402	0.607	1.5e-42

TAIR|locus:2056266 LOV1 "LONG VEGETATIVE PHASE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
 Identities = 197/384 (51%), Positives = 243/384 (63%)

Query:    20 HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEK 79
             H+HD+VMPGFRFHPTEEEL+EFYLRRKVEGKRFNVELITFLDLYRYDPWELPA+AA+GEK
Sbjct:    46 HDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEK 105

Query:    80 EWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKG 139
             EW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI+SE SR IGLKKTLVFYSGKAPKG
Sbjct:   106 EWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYSGKAPKG 165

Query:   140 IRTSWIMNEYRLPQHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKAXXXXXXXXX 199
              RTSWIMNEYRLP HETE+YQKAEISLCRV+KRPGVEDH S+PR L T            
Sbjct:   166 TRTSWIMNEYRLPHHETEKYQKAEISLCRVYKRPGVEDHPSVPRSLSTRHHNHNSSTSSR 225

Query:   200 XXXXPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDGSSSSCSDVAA 259
                   +    HH              ++   +E ++ E  S +   T  +++S SDV  
Sbjct:   226 LALRQQQ----HHSSSSNHSDNNLNNNNNINNLEKLSTE-YSGDGSTTTTTTNSNSDVT- 279

Query:   260 VLGLSKQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVALXXXXXXXL 319
              + L+ QN+YRP     + + L + S+   +    + +V        + ++         
Sbjct:   280 -IALANQNIYRPMPYDTSNNTL-IVSTRNHQDDDETAIVDDLQRLVNYQISDGGNINHQ- 336

Query:   320 IYSDAADEFHGLLTYPQ-ASMNHHQQYYNIDHHLHLQELQPQSLNLLA-TPLPAAF--SD 375
              Y   A +FH   T  Q A+ N  Q    +        L PQ+   LA   +PA    ++
Sbjct:   337 -YFQIAQQFHH--TQQQNANANALQL---VAAATTATTLMPQTQAALAMNMIPAGTIPNN 390

Query:   376 RLWE-WNPIL-EASREY--NDPFK 395
              LW+ WNPI+ + +R++  N PFK
Sbjct:   391 ALWDMWNPIVPDGNRDHYTNIPFK 414

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2202820 FEZ "FEZ" [Arabidopsis thaliana (taxid:3702)]

 Score = 493 (178.6 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
 Identities = 85/131 (64%), Positives = 107/131 (81%)

Query:    23 DVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWF 82
             DV++PGFRFHPT+EELV FYL+RKV+    ++ELI  LD+Y+YDPW+LP  A  GEKEW+
Sbjct:    14 DVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKEWY 73

Query:    83 FYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI-KSENSRSIGLKKTLVFYSGKAPKGIR 141
             FY PRDRKYRN  RPNRVT +G+WKATG DR I  SE ++ IGLKK+LVFY G+A KG++
Sbjct:    74 FYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVK 133

Query:   142 TSWIMNEYRLP 152
             T W+M+E+RLP
Sbjct:   134 TDWMMHEFRLP 144

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0045770 "positive regulation of asymmetric cell division" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2827676 NAC036 "NAC domain containing protein 36" [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 85/152 (55%), Positives = 119/152 (78%)

Query:    23 DVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWF 82
             D+ +PGFRFHPTEEEL++FYL+  V GKR +VE+I FL++YR+DPW+LP L+ +GE+EW+
Sbjct:     4 DIELPGFRFHPTEEELLDFYLKNMVYGKRSSVEVIGFLNIYRHDPWDLPGLSRIGEREWY 63

Query:    83 FYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI--KSENSRSIGLKKTLVFYSGKAPKGI 140
             F+VPR+RK+ NG RP+R T  GYWKATG+DR I   SE  R IGLKKTLVFY G+AP G 
Sbjct:    64 FFVPRERKHGNGGRPSRTTEKGYWKATGSDRKIISLSEPKRVIGLKKTLVFYRGRAPGGS 123

Query:   141 RTSWIMNEYRLPQHETERYQKAEISLCRVHKR 172
             +T W+MNE+R+P + +      ++ LC+++++
Sbjct:   124 KTDWVMNEFRMPDNCS---LPKDVVLCKIYRK 152

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0045792 "negative regulation of cell size" evidence=IMP

GO:0048281 "inflorescence morphogenesis" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

TAIR|locus:2045570 NAC042 "NAC domain containing protein 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 90/166 (54%), Positives = 123/166 (74%)

Query:    21 EHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKE 80
             E++  +PGFRFHPT+EEL+ +YLRRKVE K   +ELI  +D+Y+YDPW+LP +++VGEKE
Sbjct:    14 ENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKE 73

Query:    81 WFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGI 140
             W+F+  R RKYRN  RPNRVT SG+WKATG D+ + S N   +GLKK+LV+Y G A KG 
Sbjct:    74 WYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYS-NLDCVGLKKSLVYYLGSAGKGT 132

Query:   141 RTSWIMNEYRLPQH-ETER-YQKAEI-SLCRVHKR-PGVEDHTSLP 182
             +T W+M+E+RLP   +T+   Q+AE+ +LCR+ KR     + T LP
Sbjct:   133 KTDWMMHEFRLPSTTKTDSPAQQAEVWTLCRIFKRVTSQRNPTILP 178

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010120 "camalexin biosynthetic process" evidence=IMP

GO:0005992 "trehalose biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:1900056 "negative regulation of leaf senescence" evidence=IMP

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2167155 NAC086 "NAC domain containing protein 86" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
 Identities = 82/155 (52%), Positives = 108/155 (69%)

Query:    27 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEK--EWFFY 84
             PGFRFHPT+EEL+ +YL+RK+ G+   +E+I  +DLY+ +PW+LP  + +  K  EWFF+
Sbjct:     8 PGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEWFFF 67

Query:    85 VPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSW 144
              PRDRKY NG R NR T  GYWKATG DR + S   R+IG KKTLV+Y G+AP GIRT W
Sbjct:    68 SPRDRKYPNGSRTNRATKGGYWKATGKDRRV-SWRDRAIGTKKTLVYYRGRAPHGIRTGW 126

Query:   145 IMNEYRLPQHETERY---QKAEISLCRVHKRPGVE 176
             +M+EYRL + E E      +   +LCRV K+  +E
Sbjct:   127 VMHEYRLDESECEPSAFGMQDAYALCRVFKKIVIE 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
 Identities = 80/150 (53%), Positives = 107/150 (71%)

Query:    27 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEK--EWFFY 84
             PGFRFHPT+EELV +YL+RK+ G+   +E+I  +DLY+ +PW+LP  + +  K  EWFF+
Sbjct:     8 PGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKDLEWFFF 67

Query:    85 VPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSW 144
              PRDRKY NG R NR T +GYWKATG DR + S +SR +G KKTLV+Y G+AP G RT W
Sbjct:    68 SPRDRKYPNGSRTNRATKAGYWKATGKDRKVTS-HSRMVGTKKTLVYYRGRAPHGSRTDW 126

Query:   145 IMNEYRLPQHETERYQKAE--ISLCRVHKR 172
             +M+EYRL + E +     +   +LCRV K+
Sbjct:   127 VMHEYRLEEQECDSKSGIQDAYALCRVFKK 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 84/148 (56%), Positives = 109/148 (73%)

Query:    27 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
             PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP+ A  GEKEW+F+ P
Sbjct:    16 PGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSP 75

Query:    87 RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
             RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct:    76 RDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRR-VGIKKALVFYIGKAPKGTKTNWIM 134

Query:   147 NEYRL--PQHETERYQKAEISLCRVHKR 172
             +EYRL  P       +  +  LCR++K+
Sbjct:   135 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 84/148 (56%), Positives = 108/148 (72%)

Query:    27 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
             PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct:    16 PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 75

Query:    87 RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
             RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct:    76 RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 134

Query:   147 NEYRL--PQHETERYQKAEISLCRVHKR 172
             +EYRL  P       +  +  LCR++K+
Sbjct:   135 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 87/162 (53%), Positives = 109/162 (67%)

Query:    27 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
             PGFRFHPT+EELV  YL RK   +   V +I  +DLY+YDPWELP LA  GEKEW+F+ P
Sbjct:     9 PGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSP 68

Query:    87 RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
             RDRKY NG RPNR   SGYWKATGAD+ I     + +G+KK LVFY+GKAPKG +T+WIM
Sbjct:    69 RDRKYPNGSRPNRSAGSGYWKATGADKPIGLP--KPVGIKKALVFYAGKAPKGEKTNWIM 126

Query:   147 NEYRLPQHETE-RYQKAEISL-----CRVHKRPGVEDHTSLP 182
             +EYRL   +   R +K  + L     CR++ + G  +    P
Sbjct:   127 HEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPP 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 79/130 (60%), Positives = 98/130 (75%)

Query:    22 HDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEW 81
             H  + PGFRFHPT+EELV  YL++K +     V +I  +DLY++DPWELP+ A+ GE EW
Sbjct:    13 HPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEW 72

Query:    82 FFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIR 141
             +F+ PRDRKY NG RPNR  TSGYWKATG D+ I + NS  +G+KK LVFY GK PKGI+
Sbjct:    73 YFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIK 132

Query:   142 TSWIMNEYRL 151
             T WIM+EYRL
Sbjct:   133 TDWIMHEYRL 142

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035370001 SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (377 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	395
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	3e-73

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  224 bits (573), Expect = 3e-73
 Identities = 73/128 (57%), Positives = 98/128 (76%), Gaps = 2/128 (1%)

Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELP-ALAAVGEKEWFFY 84
           PGFRFHPT+EELV +YL+RKV GK   + ++I  +D+Y+++PW+LP   A  G++EW+F+
Sbjct: 3   PGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWYFF 62

Query: 85  VPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSW 144
            PRDRKY NG R NR T SGYWKATG D+ + S+    +G+KKTLVFY G+APKG +T W
Sbjct: 63  SPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEKTDW 122

Query: 145 IMNEYRLP 152
           +M+EYRL 
Sbjct: 123 VMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	395
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=2.4e-42  Score=299.07  Aligned_cols=128  Identities=53%  Similarity=1.071  Sum_probs=97.9

Q ss_pred             CCCCceEcCChHHHHHHHHHHHHcCCCCCc-cceeeccCCCCCCCChhhhhccCceeEEEEeeccccCCCCCCCcccccc
Q 016095           25 VMPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTS  103 (395)
Q Consensus        25 LPPGfRF~PTDEELI~~YLrrKi~G~plp~-~~I~evDVY~~ePwdLP~~~~~ge~eWYFFtpr~rK~~nG~R~~R~tgg  103 (395)
                      |||||||+|||||||.+||++|+.|.+++. .+|+++|||.+|||+|++....++++||||+++.+++.+|.|.+|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            799999999999999999999999999887 7999999999999999964445677999999999999999999999999


Q ss_pred             ceEeecCCCceEEcCCCceEEEEEEEEEeeCCCCCCCCcCcEEEEEecC
Q 016095          104 GYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLP  152 (395)
Q Consensus       104 G~WK~tG~~k~I~~~~G~vIG~KktL~Fy~Gk~pkg~kT~WvMhEY~L~  152 (395)
                      |+||.+|+.+.|.+.+|.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999877899999999999999888999999999999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	395
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-45
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		3e-45
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		1e-42

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  179 bits (454), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 78
Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 79  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 137
Query: 147 NEYRL--PQHETERYQKAEISLCRVHKR 172
           +EYRL  P       +  +  LCR++K+
Sbjct: 138 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  179 bits (454), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 22  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 81
Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 82  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 140
Query: 147 NEYRL--PQHETERYQKAEISLCRVHKR 172
           +EYRL  P       +  +  LCR++K+
Sbjct: 141 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 168

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRFHPT++ELVE YL RK  G+R  V +I  +DLY++DPW+LP  A  G +EW+F+ P
Sbjct: 17  PGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTP 76
Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNR   +GYWKATGAD+ + +   R++G+KK LVFY+GKAP+G++T WIM
Sbjct: 77  RDRKYPNGSRPNRAAGNGYWKATGADKPV-APRGRTLGIKKALVFYAGKAPRGVKTDWIM 135
Query: 147 NEYRL 151
           +EYRL
Sbjct: 136 HEYRL 140

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	395
1ut7_A	171	No apical meristem protein; transcription regulati	6e-88
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-87
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  262 bits (672), Expect = 6e-88
 Identities = 81/150 (54%), Positives = 107/150 (71%), Gaps = 3/150 (2%)

Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 78

Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNRV  SGYWKATG D++I +   + +G+KK LVFY GKAPKG +T+WIM
Sbjct: 79  RDRKYPNGSRPNRVAGSGYWKATGTDKIIST-EGQRVGIKKALVFYIGKAPKGTKTNWIM 137

Query: 147 NEYRLPQHETERY--QKAEISLCRVHKRPG 174
           +EYRL +        +  +  LCR++K+  
Sbjct: 138 HEYRLIEPSRRNGSTKLDDWVLCRIYKKQS 167

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  261 bits (669), Expect = 2e-87
 Identities = 80/179 (44%), Positives = 108/179 (60%), Gaps = 16/179 (8%)

Query: 3   MSMSISMSNNNDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDL 62
           M M        +          + PGFRFHPT++ELVE YL RK  G+R  V +I  +DL
Sbjct: 1   MGMRRERDAEAELN--------LPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDL 52

Query: 63  YRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRS 122
           Y++DPW+LP  A  G +EW+F+ PRDRKY NG RPNR   +GYWKATGAD+ +     R+
Sbjct: 53  YKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP-RGRT 111

Query: 123 IGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKA-------EISLCRVHKRPG 174
           +G+KK LVFY+GKAP+G++T WIM+EYRL                  +  LCR++ +  
Sbjct: 112 LGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKN 170

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 5e-05
 Identities = 54/361 (14%), Positives = 100/361 (27%), Gaps = 113/361 (31%)

Query: 23  DVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELP---------AL 73
           D +      H + +         +V+       L+ +LD     P +LP          L
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSL-----LLKYLDC---RPQDLPREVLTTNPRRL 330

Query: 74  AAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRM---IKS--ENSRSIGLKKT 128
           + + E             R  D          WK    D++   I+S          +K 
Sbjct: 331 SIIAES-----------IR--DGLAT---WDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374

Query: 129 L----VFYSGKAPKGIRTS-------W----------IMNE---------------YRLP 152
                VF     P             W          ++N+                 +P
Sbjct: 375 FDRLSVF-----PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429

Query: 153 QHETERYQKAEISLCRVHKRPGVEDHTSLPRCLPTSKASSSRTGSSRSTTRPDKILYYHH 212
               E   K E +   +H+   + DH ++P+   +                 D+  Y H 
Sbjct: 430 SIYLELKVKLE-NEYALHRS--IVDHYNIPKTFDSDD---------LIPPYLDQYFYSHI 477

Query: 213 RRH--GIERLQGFGGQSSHQQMEMV------TDEKMSTNTDQTDGSSSSCSDVAAVLGLS 264
             H   IE  +            MV       ++K+  +      +S S  +    L   
Sbjct: 478 GHHLKNIEHPERM------TLFRMVFLDFRFLEQKIR-HDSTAWNASGSILNTLQQL--- 527

Query: 265 KQNVYRPNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTTLFPVALSSSSSSSLIYSDA 324
               Y+P +         L ++I++        +     T L  +AL +   +  I+ +A
Sbjct: 528 --KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEA--IFEEA 583

Query: 325 A 325
            
Sbjct: 584 H 584

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 6e-04
 Identities = 50/315 (15%), Positives = 87/315 (27%), Gaps = 102/315 (32%)

Query: 143 SWIMN----EYRLPQHETERYQKAEISLCRV------HKRPGVEDHTSLPRCLPTSKASS 192
            ++M+    E R P   T  Y +    L         +    ++ +  L + L       
Sbjct: 92  KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL------- 144

Query: 193 SRTGSSRSTTRPDKILYYHHRRHGIERLQGFGGQSSHQQMEMVTDEKMSTNTDQTDG--- 249
                     RP K +       G   + G G       +++    K+    D       
Sbjct: 145 -------LELRPAKNVLI----DG---VLGSGKTW--VALDVCLSYKVQCKMD--FKIFW 186

Query: 250 -SSSSCSDVAAVLGLSKQNVYR---PNMASITTSLLGLPSSIMEEQAAASTLVPSCTTTT 305
            +  +C+    VL    Q +     PN  S +     +   I   QA    L+ S     
Sbjct: 187 LNLKNCNSPETVL-EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS----K 241

Query: 306 LFPVALSSSSSSSLIYSD-----AADEFHG----LLTYPQAS-----MNHHQQYYNIDHH 351
            +   L       L+  +     A + F+     LLT                + ++DHH
Sbjct: 242 PYENCL-------LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294

Query: 352 LHLQELQPQSLNLLAT-----------------PL-----PAAFSDRL--WE-W------ 380
                   +  +LL                   P        +  D L  W+ W      
Sbjct: 295 SMTLT-PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353

Query: 381 --NPILEASREYNDP 393
               I+E+S    +P
Sbjct: 354 KLTTIIESSLNVLEP 368

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	395
1ut7_A	171	No apical meristem protein; transcription regulati	100.0
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.1e-53  Score=388.79  Aligned_cols=164  Identities=51%  Similarity=0.957  Sum_probs=135.5

Q ss_pred             cCCCCCCCCCCCCCCCCCCceEcCChHHHHHHHHHHHHcCCCCCccceeeccCCCCCCCChhhhhccCceeEEEEeeccc
Q 016095           10 SNNNDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDR   89 (395)
Q Consensus        10 ~~~~~~~~~~~~~~~LPPGfRF~PTDEELI~~YLrrKi~G~plp~~~I~evDVY~~ePwdLP~~~~~ge~eWYFFtpr~r   89 (395)
                      ++|+..+.+......|||||||+|||||||.+||++|+.|.+++..+|+++|||.+|||+||+....++++||||+++++
T Consensus         2 ~~m~~~~~~~~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~   81 (171)
T 1ut7_A            2 SHMGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDR   81 (171)
T ss_dssp             CCCCCC----CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC
T ss_pred             CccccccCCcccccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEecccc
Confidence            34444444455667899999999999999999999999999999999999999999999999998888999999999999


Q ss_pred             cCCCCCCCccccccceEeecCCCceEEcCCCceEEEEEEEEEeeCCCCCCCCcCcEEEEEecCCCCcc--cccCCCeEEE
Q 016095           90 KYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETE--RYQKAEISLC  167 (395)
Q Consensus        90 K~~nG~R~~R~tggG~WK~tG~~k~I~~~~G~vIG~KktL~Fy~Gk~pkg~kT~WvMhEY~L~~~~~~--~~~~~d~VLC  167 (395)
                      |+++|.|++|++++||||++|+++.|... +.+||+||+|+||.|+++++.+|+|+||||+|......  ....++||||
T Consensus        82 k~~~g~R~~R~t~~G~Wk~tG~~k~I~~~-~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlC  160 (171)
T 1ut7_A           82 KYPNGSRPNRVAGSGYWKATGTDKIISTE-GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLC  160 (171)
T ss_dssp             -------CCEEETTEEEEEEEEEEEEEET-TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEE
T ss_pred             ccCCCCcccccCCCCEEeccCCCceEEec-CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEE
Confidence            99999999999999999999999999974 68999999999999999999999999999999875421  1245799999


Q ss_pred             EEEecCC
Q 016095          168 RVHKRPG  174 (395)
Q Consensus       168 RIykk~g  174 (395)
                      |||++.+
T Consensus       161 rv~~k~~  167 (171)
T 1ut7_A          161 RIYKKQS  167 (171)
T ss_dssp             EEEECC-
T ss_pred             EEEEcCC
Confidence            9999865

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.1e-53  Score=389.86  Aligned_cols=154  Identities=51%  Similarity=1.040  Sum_probs=135.4

Q ss_pred             CCCCCCCCCceEcCChHHHHHHHHHHHHcCCCCCccceeeccCCCCCCCChhhhhccCceeEEEEeeccccCCCCCCCcc
Q 016095           20 HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNR   99 (395)
Q Consensus        20 ~~~~~LPPGfRF~PTDEELI~~YLrrKi~G~plp~~~I~evDVY~~ePwdLP~~~~~ge~eWYFFtpr~rK~~nG~R~~R   99 (395)
                      .....|||||||+|||||||.+||++|+.|.+++..+|.++|||.+|||+||+....|+++||||+++++|+++|.|++|
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR   89 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNR   89 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCE
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCcee
Confidence            34457999999999999999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             ccccceEeecCCCceEEcCCCceEEEEEEEEEeeCCCCCCCCcCcEEEEEecCCCCccc-------ccCCCeEEEEEEec
Q 016095          100 VTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETER-------YQKAEISLCRVHKR  172 (395)
Q Consensus       100 ~tggG~WK~tG~~k~I~~~~G~vIG~KktL~Fy~Gk~pkg~kT~WvMhEY~L~~~~~~~-------~~~~d~VLCRIykk  172 (395)
                      ++++||||++|+++.|... |.+||+||+|+||.|+++++.+|+|+||||+|.......       ...++|||||||+|
T Consensus        90 ~t~~G~WkatG~dk~I~~~-g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K  168 (174)
T 3ulx_A           90 AAGNGYWKATGADKPVAPR-GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNK  168 (174)
T ss_dssp             EETTEEEEECSCCEEECCS-SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEES
T ss_pred             ecCCceEccCCCCcEEeeC-CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEc
Confidence            9999999999999999874 789999999999999999999999999999998754321       24578999999998


Q ss_pred             CC
Q 016095          173 PG  174 (395)
Q Consensus       173 ~g  174 (395)
                      ++
T Consensus       169 ~~  170 (174)
T 3ulx_A          169 KN  170 (174)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	395
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	4e-62

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  195 bits (496), Expect = 4e-62
 Identities = 83/148 (56%), Positives = 108/148 (72%), Gaps = 3/148 (2%)

Query: 27  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVP 86
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 78

Query: 87  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 146
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 79  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 137

Query: 147 NEYRLPQHETER--YQKAEISLCRVHKR 172
           +EYRL +        +  +  LCR++K+
Sbjct: 138 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	395
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.1e-51  Score=366.71  Aligned_cols=162  Identities=51%  Similarity=0.955  Sum_probs=133.4

Q ss_pred             CCCCCCCCCCCCCCCCCCceEcCChHHHHHHHHHHHHcCCCCCccceeeccCCCCCCCChhhhhccCceeEEEEeecccc
Q 016095           11 NNNDSKNDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRK   90 (395)
Q Consensus        11 ~~~~~~~~~~~~~~LPPGfRF~PTDEELI~~YLrrKi~G~plp~~~I~evDVY~~ePwdLP~~~~~ge~eWYFFtpr~rK   90 (395)
                      +|..-+.+-.....|||||||+|||||||.+||++|+.|.+++.++|+++|||.+|||+||+....++++||||+++.++
T Consensus         3 ~~~~~~~~~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k   82 (166)
T d1ut7a_           3 HMGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRK   82 (166)
T ss_dssp             CCCCC----CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-
T ss_pred             cccccccCccccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeeccc
Confidence            44444445555667999999999999999999999999999999999999999999999999888888999999999999


Q ss_pred             CCCCCCCccccccceEeecCCCceEEcCCCceEEEEEEEEEeeCCCCCCCCcCcEEEEEecCCCCc--ccccCCCeEEEE
Q 016095           91 YRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHET--ERYQKAEISLCR  168 (395)
Q Consensus        91 ~~nG~R~~R~tggG~WK~tG~~k~I~~~~G~vIG~KktL~Fy~Gk~pkg~kT~WvMhEY~L~~~~~--~~~~~~d~VLCR  168 (395)
                      +++|.|.+|++++|+||.+|+++.|.+ +|.+||+|++|+||+++.+++.+|+|+||||+|.+...  .....++|||||
T Consensus        83 ~~~g~r~~R~~g~G~Wk~~g~~~~i~~-~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCr  161 (166)
T d1ut7a_          83 YPNGSRPNRVAGSGYWKATGTDKIIST-EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCR  161 (166)
T ss_dssp             ------CCEEETTEEEEEEEEEEEEEE-TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEE
T ss_pred             cCCCCccccccCCCEecccCCCceEec-CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEE
Confidence            999999999999999999999998886 57899999999999999999999999999999987543  223457899999


Q ss_pred             EEecC
Q 016095          169 VHKRP  173 (395)
Q Consensus       169 Iykk~  173 (395)
                      ||+|+
T Consensus       162 I~~Kk  166 (166)
T d1ut7a_         162 IYKKQ  166 (166)
T ss_dssp             EEECC
T ss_pred             EEecC
Confidence            99874